|
Name |
Accession |
Description |
Interval |
E-value |
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
58-868 |
3.73e-51 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 190.36 E-value: 3.73e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 58 PITTITTEDMKMEGNFTVADALRNsnLNSFgSFSERSGSSAQsqaTINLRGAGSSRTLVLIDGKRFPGSPtlGGASANLN 137
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRR--IPGV-SVTRGGGGGGS---TISIRGFGPDRTLVLVDGLPLASSN--YGRGVDLN 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 138 AIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNYQGIEFnvgggsrdrdggltskefSVVAGYQMDKGNitfafdH 217
Cdd:cd01347 73 TIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGG------------------SVTAGYGSDNSG------S 128
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 218 QDRKGIsdadrdftapwmedlngdGVIQAYSETDGWSYYgasvkgpdgiyqpsplcgdlaaEYGDNVFKQVRGDDQFGAG 297
Cdd:cd01347 129 SGGGGF------------------DVSGALADDGAFGAR----------------------LYGAYRDGDGTIDGDGQAD 168
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 298 SdlcmyaygnvsynkASTDRNTVYVDANYEIAEDLEWFGRVMVTQSNSFGRYAPPAANWNNMAADNPHNPFDVEAKGYfr 377
Cdd:cd01347 169 D--------------SDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDW-- 232
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 378 wvgigTRDGNVDDYNQDYLTGLrgtisaLNDAEWEVY--YHHNIADNKSIGEYYLSYsglayNEANGIDLGSEAGINNMK 455
Cdd:cd01347 233 -----DYRDRYRKRASLGLEHD------LNDTGWTLRanLSYSYTDNDGDPLILNGG-----NNAAGGDLGRSGYSSERD 296
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 456 ATtltqgsaifdQYNAGIGFDAfELPGGSVAHY--VGLEYFDQQYsevydaqseagliggsagnsaagDRQVWAMFYEAV 533
Cdd:cd01347 297 TT----------QLGFDAGLNA-PFGTGPVAHTltLGVEYRREEL-----------------------DEKQTALYAQDT 342
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 534 LPITDDIELNLAARYDDY--------------SDFGDNIAPKAAIRWQALENVVVRASYSEAFRAPALDQLFAATTFSAe 599
Cdd:cd01347 343 IELTDDLTLTLGLRYDHYdqdskdtiaggttaKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGG- 421
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 600 dgidkpyceatgtpcserqfdTYISANKELGPETSQYVNFGVAWDIVDDIGLKVDYFNLNIDDVIAQRSITSVMTGIyeg 679
Cdd:cd01347 422 ---------------------TAAVGNPNLKPEKSKQYELGLKYDPGDGLTLSAALFRIDIKNEIVSTPTNTGLGLV--- 477
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 680 tlapsntfyvkrdpasagqaigaasevgTGYSNANTLEISGIDVALNAKFetnigDIGFNWTNSFVLDYTEEVDGGAESR 759
Cdd:cd01347 478 ----------------------------TVYVNGGKARIRGVELEASYDL-----TDGLGLTGSYTYTDTEVKRTDGATT 524
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 760 DTSGWNgQPDYKSVFTTNYRMGDH--SLSWNMNYTSSTFY-FEDDASKGELDSWLIHNISYVYDAGNYGSILLGINNLTD 836
Cdd:cd01347 525 GNRLPG-IPKHTANLGLDYELPDEglTAGGGVRYRGKQYAdTANGNNTVKVPGYTLVDLSASYQFTKNLTLRLGVNNLFD 603
|
810 820 830
....*....|....*....|....*....|..
gi 499957344 837 EDPVLSPDGKFENADLYNNYGREYRASYTLKF 868
Cdd:cd01347 604 KDYYTSLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
33-827 |
1.13e-50 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 188.53 E-value: 1.13e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 33 EDGAKVERIEVTGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALRNSNlnsfgSFSERSGSSAQSQATINLRGAGSS 112
Cdd:COG4771 22 EDATELEEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLP-----GVSVTRSGGRGGSSGISIRGLGGD 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 113 RTLVLIDGKRFPGSPTLGGAsaNLNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNYQGIEFNVGGGSRDRDGG 192
Cdd:COG4771 97 RVLVLIDGVPVNNPALGGGG--DLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVSLGYGSNGNG 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 193 LTSkeFSVVAGYQMDKGNITFAFDHQDRKGISDADRDFTAPWmedlngdgviqaysetdgwsyygasvkgpdgiyqpspl 272
Cdd:COG4771 175 TYS--GSLSLGGPGDKLSFLLSGSYRDRDGYLDYRNGGFVGN-------------------------------------- 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 273 cgdlaaeygdnvfkqvrgddqfgagsdlcmyaygnvsynkASTDRNTVYVDANYEIAEDLEWFGRVMVTQSNSFGRYAPP 352
Cdd:COG4771 215 ----------------------------------------SGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTL 254
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 353 AANWNNMAADNPhnpfdveakgyfrwvgigtRDGNVDDYNqdyltglrgtisalndaeWEVYYHHNIADNksiGEYYLSY 432
Cdd:COG4771 255 GDTEISSDNAGD-------------------RDTTTDRGN------------------YSLRYNGDLGDN---LDLSLYY 294
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 433 SGLAYNEANGIDLGSEAGINNMKATTLTQGSaifdQYNAGIGfDAFELpggsvahYVGLEYFDQQYSEvydaqseaglig 512
Cdd:COG4771 295 SRTDRDSTNGSLGGSTGSFSDSDDTTYGLEL----DLTYPLG-GNHTL-------TLGAEYRYDDLDS------------ 350
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 513 GSAGNSAAGDRQVWAMFYEAVLPITDDIELNLAARYDDYSDFG----DNIAPKAAIRWQALENVVVRASYSEAFRAPALD 588
Cdd:COG4771 351 SSFLGGADASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYSTFGasnyTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLA 430
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 589 QLFAATTFSAedgidkpyceatgtpcserqfDTYISANKELGPETSQYVNFGVAWDIVDD-IGLKVDYFNLNIDDVIAQR 667
Cdd:COG4771 431 ELYGSGTGTP---------------------GRYVLGNPDLKPETSDNYELGLEYRLGNGgLSLSLTGFYTDIKDLIVLV 489
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 668 SITSVMTGIYegtlapsntfyvkrdpasagqaigaasevgtGYSNANTLEISGIDVALNAKFETNI-GDIGFNWTNSfvl 746
Cdd:COG4771 490 PVGPGPGDVL-------------------------------QYENVGKARTYGLELELKYRLGKGLtLTASYTYLDS--- 535
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 747 dyteEVDGGAESRDtsgWNGQPDYKSVFTTNYRMGDH--SLSWNMNYTSSTFYFEDDASKGELDSWLIHNISYVYDAGNY 824
Cdd:COG4771 536 ----KIDDGDTGEP---LPNVPPHKANLGLDYRLPKWwlLLLLTRYYGGRYVTPPSGRLEGYTPGYTLLDLRASYKLTKN 608
|
...
gi 499957344 825 GSI 827
Cdd:COG4771 609 LTL 611
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
355-867 |
1.15e-29 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 123.73 E-value: 1.15e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 355 NWNNMAADNPHNPFDVEAKGYFRWVG------IGTRDGNVDDYNQDYLTGLRGTISALNDAEWEVYYHHNIADNKSIGEY 428
Cdd:pfam00593 1 GWQLSLDLLGDDTLLTLGYDYSRYTDgldlglTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLST 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 429 YLSYSGLAYNEANGIDLGSEAGINNMKATTLTQGSAIFDQYNAGIGFDA-FELPGGSVAHYVGLEYFDQQYsevyDAQSE 507
Cdd:pfam00593 81 LRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLsHDLLLGVELRTAGLDYRRLDD----DAYDP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 508 AGLIGGSAGNSAAGDRQVWAMFYEAVLPITDDIELNLAARYDDYSDFGDNIA--------------PKAAIRWQALENVV 573
Cdd:pfam00593 157 YDPANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNgggdnfsrsysafsPRLGLVYKPTDNLS 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 574 VRASYSEAFRAPALDQLFAATtfsaedgidkpyceatgtpcSERQFDTYISANKELGPETSQYVNFGVAWDiVDDIGLKV 653
Cdd:pfam00593 237 LYASYSRGFRAPSLGELYGSG--------------------SGGGGGAVAGGNPDLKPETSDNYELGLKYD-DGRLSLSL 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 654 DYFNLNIDDVIAQRSITSVMTGIYegtlapsntfyvkrdpasagqaigaasevgTGYSNANTLEISGIDVALNAKFETNI 733
Cdd:pfam00593 296 ALFYIDIKNLITSDPDGPGLGGTV------------------------------YTYTNVGKARIRGVELELSGRLWGLG 345
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 734 GDIGfnwtnsfVLDYTEEVDGGAESRDTSGWNGQPDYKSVFTTNYR--MGDHSLSWNMNYTS-STFYFEDDASKGELDSW 810
Cdd:pfam00593 346 LSGG-------GYTYTDADDDADADDTGNPLPNVPRHTANLGLTYDfpLGGWGARLGARYVGsGERRYGDAANTFKTPGY 418
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 499957344 811 LIHNISYVYDAGNYGSILLGINNLTDEDPVLSPDGKFENADLYNNYGREYRASYTLK 867
Cdd:pfam00593 419 TLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
43-868 |
2.02e-22 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 103.04 E-value: 2.02e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 43 VTGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALRnsnlnsfgsfsERSG----SSAQSQATINLRGAGSSRTLVLI 118
Cdd:PRK10064 35 VTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLK-----------EVPGvqltNEGDNRKGVSIRGLDSSYTLILI 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 119 DGKRFPG-SPTLGGASANLNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNYQgiefnvgggsrdrdggltske 197
Cdd:PRK10064 104 DGKRVNSrNAVFRHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQ--------------------- 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 198 fsvvagyqmdkgnitfafdhqdrkgisdadrdftaPWMEDLNGDGVIQAYSETdGWSYYGasvkgpdGIYQPSPLCGDLa 277
Cdd:PRK10064 163 -----------------------------------KWHGTVTVDTTIQEHRDR-GDTYNG-------QFFTSGPLIDGV- 198
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 278 aeygdnvfkqvrgddqfgagsdLCMYAYGNVSYNKASTDRNTVYVDANyeIAEDLEWFgrvmvTQSNSFGRYAPPAANWN 357
Cdd:PRK10064 199 ----------------------LGMKAYGSLAKREKDDPQNSTTTDTG--ETPRIEGF-----TSRDGNVEFAWTPNQNH 249
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 358 NMAAdnphnpfdveakGYfrwvGIGTRDGNVDDYNQDYLTglRGTISALNDAEW-----EVYYHHNIADNKSIGEyylsy 432
Cdd:PRK10064 250 DFTA------------GY----GFDRQDRDSDSLDKNRLE--RQNYSLSHNGRWdygnsELKYYGEKVENKNPGN----- 306
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 433 SGLAYNEANGIDlgseaginnmkattltqgsaifdqynagigfDAFELPGGSVAHYV--GLEYfdqQYSEVYDAqseAGL 510
Cdd:PRK10064 307 SSPITSESNSID-------------------------------GKYTLPLTAINQFLtfGGEW---RHDKLSDA---VNL 349
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 511 IGGSAGNSAAgdRQvWAMFYEAVLPITDDIELNLAARYDDYSDFGDNIAPKAAIRWQALENVVVRASYSEAFRAPALDQL 590
Cdd:PRK10064 350 TGGTSSKTSA--SQ-YALFVEDEWRIFEPLALTTGVRMDDHETYGDHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQL 426
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 591 FAA-TTFSAEDGidkpyCEATGTPcserqfdtyisankELGPETSQYVNFGVAWD----IVDDIGLKVDYFNLNIDDVIA 665
Cdd:PRK10064 427 SPDwTSNSCRGA-----CKIVGSP--------------DLKPETSESWELGLYYMgeegWLEGVESSVTVFRNDVDDRIS 487
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 666 QRSITSVmtgiyegTLAPSNTFYVKRDPASAGQAIGAASevgtgYSNANTLEISGIDVALNAKFETNIgDIGFNWTNSFV 745
Cdd:PRK10064 488 ISRTSDV-------NAAPGYQNFVGFETNGRGRRVPVFR-----YYNVNKARIQGVETELKIPFNDEW-KLSLNYTYNDG 554
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 746 LDYTEEVDGGAESRDTSGWNGQPDYKSVFTTnyrmgDHSLSWNMNYTSSTFYF-EDDASKGELDSWlihNISYVYDAGNY 824
Cdd:PRK10064 555 RDVSNGENKPLSDLPFHTANGTLDWKPLALE-----DWSFYVSGNYTGQKRADsATAKTPGGYTIW---NTGAAWQVTKD 626
|
810 820 830 840
....*....|....*....|....*....|....*....|....
gi 499957344 825 GSILLGINNLTDEDpvLSPDgKFEnadlYNNYGREYRASYTLKF 868
Cdd:PRK10064 627 VKLRAGVLNLGDKD--LSRD-DYS----YNEDGRRYFMAVDYRF 663
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
39-868 |
1.05e-20 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 97.46 E-value: 1.05e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 39 ERIEVTGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALRN-SNLnsfgSFSERSGSSAQSqatINLRGAGSSRTLVL 117
Cdd:TIGR01785 2 DTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTvPGV----DVTGGGRPPGQS---INIRGLQDNRVLVV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 118 IDGKRFPGspTLGGASANLNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNYQGIEFNvgggsrdrdggltsKE 197
Cdd:TIGR01785 75 VDGARQNY--QRGGAHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLRPG--------------QL 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 198 FSVVAGYQMDKGNITFAFDHqdrkgiSDADRdftapwmEDLNGDGVIQAYsetdgwsyygasvkgpdgiyqpsplcgdla 277
Cdd:TIGR01785 139 FGGLAKLSYGSNNNSFGGSV------AVAGR-------LDDNLDALVAAT------------------------------ 175
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 278 aeygdnvfkqVRGDDQFGAGSDLCMYAYGNVSYNKAStdRNTVYVDANYEIAedlewFGrvMVTQSNSfgryappaanwn 357
Cdd:TIGR01785 176 ----------YRDGGNYRNGNKEEATNSAYVQKNLLA--KLGWQLDDAQRLE-----FS--YFTTEGS------------ 224
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 358 nmaADNPHNPFDVEAKGYFRWVGIGTRDGNVDDYNQDYLTGLRGtiSALNDAEWEVYYHHNIADNKSIGEYYLSYSGLAY 437
Cdd:TIGR01785 225 ---LDEAQNSGPGTEYVLGSSSTLLASSTRDRSATLTYNWTPED--NPWLDATASLYYNRTENDNDRSARGVGREEGYQY 299
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 438 NEaNGIDLgseagiNNmkattltqgsaifdqynagigfdAFELPGGSVAHYV-GLEYFDQQYSEVYDAQSEAGLIggsAG 516
Cdd:TIGR01785 300 TT-YGATL------QN-----------------------TSRFDVASWSTLTyGVDWMKDKRRTESFDPNSVTTI---VP 346
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 517 NSAAGDRQVWAMFYEAVLPITDD-IELNLAARYD------------DYSDFGDN-IAPKAAIRWQALENVVVRASYSEAF 582
Cdd:TIGR01785 347 NPPSAKEYFFGLFLQDNIPLLDDrLTLSAGLRYDhyklspkttadtEAVDRSYSrWSPSLGLSYKPVDWLTLYASYSQGF 426
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 583 RAPALDQLFAAttfSAEDGIDKPYCeatgtpcserqfdtyISANKELGPETS--QYVNFGVAWDIV----DDIGLKVDYF 656
Cdd:TIGR01785 427 RAPSIDELYGT---GDHPGTPGGYT---------------FAPNPNLKPETSktWELGANLSFDNLlldnDQLQFKVAYF 488
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 657 NLNIDDVIAQRSitsvmtGIYEGTLAPSNTFyvkrdpasagqaigaasevgTGYSNANTLEISGIDVALNAKFEtnigdi 736
Cdd:TIGR01785 489 YNDVKDFIDLTI------GVTDNVTAGMNNI--------------------TQYVNIDGARIRGIEASASYDAG------ 536
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 737 gfNWTNSFVLDYTEevdgGAESRDTSGWNGQPDYKSVFTTNYRMGDH--SLSWNMNYT---SSTFYFEDDASKG--ELDS 809
Cdd:TIGR01785 537 --LWATGLSYGYTI----GKDQNTNQWLSNIPPLKLVVTVGYRFPDRrlDLGAKAAYYerqSESPTTEDVAANGllTTPG 610
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499957344 810 WLIHNI--SYVYDAGNYGSILLGINNLTDEDPVLSPDgkfenaDLYNNYGREYRASYTLKF 868
Cdd:TIGR01785 611 YTVVDLyaTYQPNAVKGLTVRFGVNNLTDRKYTPAQS------VPGAGPGRNFKGSVKYQF 665
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
58-868 |
3.73e-51 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 190.36 E-value: 3.73e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 58 PITTITTEDMKMEGNFTVADALRNsnLNSFgSFSERSGSSAQsqaTINLRGAGSSRTLVLIDGKRFPGSPtlGGASANLN 137
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRR--IPGV-SVTRGGGGGGS---TISIRGFGPDRTLVLVDGLPLASSN--YGRGVDLN 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 138 AIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNYQGIEFnvgggsrdrdggltskefSVVAGYQMDKGNitfafdH 217
Cdd:cd01347 73 TIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGG------------------SVTAGYGSDNSG------S 128
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 218 QDRKGIsdadrdftapwmedlngdGVIQAYSETDGWSYYgasvkgpdgiyqpsplcgdlaaEYGDNVFKQVRGDDQFGAG 297
Cdd:cd01347 129 SGGGGF------------------DVSGALADDGAFGAR----------------------LYGAYRDGDGTIDGDGQAD 168
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 298 SdlcmyaygnvsynkASTDRNTVYVDANYEIAEDLEWFGRVMVTQSNSFGRYAPPAANWNNMAADNPHNPFDVEAKGYfr 377
Cdd:cd01347 169 D--------------SDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDW-- 232
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 378 wvgigTRDGNVDDYNQDYLTGLrgtisaLNDAEWEVY--YHHNIADNKSIGEYYLSYsglayNEANGIDLGSEAGINNMK 455
Cdd:cd01347 233 -----DYRDRYRKRASLGLEHD------LNDTGWTLRanLSYSYTDNDGDPLILNGG-----NNAAGGDLGRSGYSSERD 296
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 456 ATtltqgsaifdQYNAGIGFDAfELPGGSVAHY--VGLEYFDQQYsevydaqseagliggsagnsaagDRQVWAMFYEAV 533
Cdd:cd01347 297 TT----------QLGFDAGLNA-PFGTGPVAHTltLGVEYRREEL-----------------------DEKQTALYAQDT 342
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 534 LPITDDIELNLAARYDDY--------------SDFGDNIAPKAAIRWQALENVVVRASYSEAFRAPALDQLFAATTFSAe 599
Cdd:cd01347 343 IELTDDLTLTLGLRYDHYdqdskdtiaggttaKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGG- 421
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 600 dgidkpyceatgtpcserqfdTYISANKELGPETSQYVNFGVAWDIVDDIGLKVDYFNLNIDDVIAQRSITSVMTGIyeg 679
Cdd:cd01347 422 ---------------------TAAVGNPNLKPEKSKQYELGLKYDPGDGLTLSAALFRIDIKNEIVSTPTNTGLGLV--- 477
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 680 tlapsntfyvkrdpasagqaigaasevgTGYSNANTLEISGIDVALNAKFetnigDIGFNWTNSFVLDYTEEVDGGAESR 759
Cdd:cd01347 478 ----------------------------TVYVNGGKARIRGVELEASYDL-----TDGLGLTGSYTYTDTEVKRTDGATT 524
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 760 DTSGWNgQPDYKSVFTTNYRMGDH--SLSWNMNYTSSTFY-FEDDASKGELDSWLIHNISYVYDAGNYGSILLGINNLTD 836
Cdd:cd01347 525 GNRLPG-IPKHTANLGLDYELPDEglTAGGGVRYRGKQYAdTANGNNTVKVPGYTLVDLSASYQFTKNLTLRLGVNNLFD 603
|
810 820 830
....*....|....*....|....*....|..
gi 499957344 837 EDPVLSPDGKFENADLYNNYGREYRASYTLKF 868
Cdd:cd01347 604 KDYYTSLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
33-827 |
1.13e-50 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 188.53 E-value: 1.13e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 33 EDGAKVERIEVTGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALRNSNlnsfgSFSERSGSSAQSQATINLRGAGSS 112
Cdd:COG4771 22 EDATELEEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLP-----GVSVTRSGGRGGSSGISIRGLGGD 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 113 RTLVLIDGKRFPGSPTLGGAsaNLNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNYQGIEFNVGGGSRDRDGG 192
Cdd:COG4771 97 RVLVLIDGVPVNNPALGGGG--DLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVSLGYGSNGNG 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 193 LTSkeFSVVAGYQMDKGNITFAFDHQDRKGISDADRDFTAPWmedlngdgviqaysetdgwsyygasvkgpdgiyqpspl 272
Cdd:COG4771 175 TYS--GSLSLGGPGDKLSFLLSGSYRDRDGYLDYRNGGFVGN-------------------------------------- 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 273 cgdlaaeygdnvfkqvrgddqfgagsdlcmyaygnvsynkASTDRNTVYVDANYEIAEDLEWFGRVMVTQSNSFGRYAPP 352
Cdd:COG4771 215 ----------------------------------------SGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTL 254
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 353 AANWNNMAADNPhnpfdveakgyfrwvgigtRDGNVDDYNqdyltglrgtisalndaeWEVYYHHNIADNksiGEYYLSY 432
Cdd:COG4771 255 GDTEISSDNAGD-------------------RDTTTDRGN------------------YSLRYNGDLGDN---LDLSLYY 294
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 433 SGLAYNEANGIDLGSEAGINNMKATTLTQGSaifdQYNAGIGfDAFELpggsvahYVGLEYFDQQYSEvydaqseaglig 512
Cdd:COG4771 295 SRTDRDSTNGSLGGSTGSFSDSDDTTYGLEL----DLTYPLG-GNHTL-------TLGAEYRYDDLDS------------ 350
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 513 GSAGNSAAGDRQVWAMFYEAVLPITDDIELNLAARYDDYSDFG----DNIAPKAAIRWQALENVVVRASYSEAFRAPALD 588
Cdd:COG4771 351 SSFLGGADASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYSTFGasnyTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLA 430
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 589 QLFAATTFSAedgidkpyceatgtpcserqfDTYISANKELGPETSQYVNFGVAWDIVDD-IGLKVDYFNLNIDDVIAQR 667
Cdd:COG4771 431 ELYGSGTGTP---------------------GRYVLGNPDLKPETSDNYELGLEYRLGNGgLSLSLTGFYTDIKDLIVLV 489
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 668 SITSVMTGIYegtlapsntfyvkrdpasagqaigaasevgtGYSNANTLEISGIDVALNAKFETNI-GDIGFNWTNSfvl 746
Cdd:COG4771 490 PVGPGPGDVL-------------------------------QYENVGKARTYGLELELKYRLGKGLtLTASYTYLDS--- 535
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 747 dyteEVDGGAESRDtsgWNGQPDYKSVFTTNYRMGDH--SLSWNMNYTSSTFYFEDDASKGELDSWLIHNISYVYDAGNY 824
Cdd:COG4771 536 ----KIDDGDTGEP---LPNVPPHKANLGLDYRLPKWwlLLLLTRYYGGRYVTPPSGRLEGYTPGYTLLDLRASYKLTKN 608
|
...
gi 499957344 825 GSI 827
Cdd:COG4771 609 LTL 611
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
38-838 |
4.94e-38 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 151.52 E-value: 4.94e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 38 VERIEVTGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALRN-SNLNSfgsfsersGSSAQSQATINLRG--AGSSRT 114
Cdd:COG1629 1 LEEVVVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRvPGVSV--------TSAGGGAGQISIRGfgGGGNRV 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 115 LVLIDGKRFPGSptlGGASANLNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNYQGIEFNVGGGSRDRDGglt 194
Cdd:COG1629 73 LVLVDGVPLNDP---SGGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGSYGT--- 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 195 sKEFSVVAGYQMDKGNITFAFDHQDRKGisdadrdftapwmedlngdgviqaysetdgwsyygasvkgpdgiyqpsplcg 274
Cdd:COG1629 147 -YRASLSLSGGNGKLAYRLSASYRDSDG---------------------------------------------------- 173
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 275 dlaaeYGDNvfkqvrgddqfgagsdlcmyaygnvsynkASTDRNTVYVDANYEIAEDlewfGRVMVTqsnsfgryappaA 354
Cdd:COG1629 174 -----YRDN-----------------------------SDSDRYNLRAKLGYQLGDD----TRLTLS------------A 203
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 355 NWNNMAADNPHNPFDVEAKGYFRWVGIGTRDGNVDDYNQDYLTGLRGTISALNDAewevyyhhniadnksigeyyLSYSG 434
Cdd:COG1629 204 SYSDSDQDSPGYLTLAALRPRGAMDDGTNPYSNDTDDNTRDRYSLSLEYEHLGDG--------------------LKLSA 263
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 435 LAYNEANGIDLGSEAGINNMKATTLTQGSAIFDQYNAGIGFDAFELPGGSVAHYVGLEYFDQQY-SEVYDAQSEAGLIGG 513
Cdd:COG1629 264 SAYYRYDDTDLDSDFTPTPADGGTLEQTDFDNRTYGLELRLTYDLGFGGKHTLLVGLDYQRQDLdGSGYPLDLGSGSLPT 343
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 514 SA-GNSAAGDRQVWAMFYEAVLPITDDIELNLAARYDDYSDFGD----------------NIAPKAAIRWQALENVVVRA 576
Cdd:COG1629 344 LTsGADDDGTTTSLALYAQDTYKLTDKLTLTAGLRYDYVSYDVDdtvtgtdsasgsrsysAFSPSLGLTYQLSPNLSLYA 423
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 577 SYSEAFRAPALDQLFAATTfsaedgidkpyceatgtpcserqfDTYISANKELGPETSQYVNFGVAWDIVDD-IGLKVDY 655
Cdd:COG1629 424 SYSRGFRAPTFGELYANGT------------------------DPYSVGNPDLKPETSTNYELGLRYRLLDGrLSLSLAL 479
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 656 FNLNIDDVIAQrsitsvmtgiyegtlapsntfyvkrdpasagQAIGAASEVGTGYSNANTLEISGIDVALNAKFetnigD 735
Cdd:COG1629 480 FYSDVDNEILS-------------------------------VPLPNDSGFSTYYTNAGKARSYGVELELSYQL-----T 523
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 736 IGFNWTNSFVLDYTEEVDGGAESRDTSG--WNGQPDYKSVFTTNYRMGDH-SLSWNMNYTSStFYFEDDASKGELDSWLI 812
Cdd:COG1629 524 PGLSLNASYSYTDAKFDDDTDGSADLDGnrLPGVPPLTANLGLTYEFPGGwSLGLGVRYVGD-RYLDDANTQGAPGGYTL 602
|
810 820
....*....|....*....|....*.
gi 499957344 813 HNISYVYDAGNYGSILLGINNLTDED 838
Cdd:COG1629 603 VDLGAGYRFGDNLTLSLGVDNLFDKK 628
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
41-334 |
5.13e-31 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 123.06 E-value: 5.13e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 41 IEVTGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALRNsnlnsFGSFSERSGSSAQSQATINLRGAGSSRTLVLIDG 120
Cdd:COG4206 1 VVVTATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRR-----VPGVQVSSSGGPGSAASISIRGLGSNQTLVLIDG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 121 KRFpGSPTLGGAsaNLNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNYQGIEFNVGGGSRDRdgglTSKEFSV 200
Cdd:COG4206 76 VPL-NDPSLGGV--DLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYGSF----GTRRLSA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 201 VAGYQMDKGNITFAFDHQDRKGISDADRDFTAP-WMEDLNGDGVIQ-AYSETDGWSYYGASVKGPDGIYQPSPlcgdlaa 278
Cdd:COG4206 149 SLSGGAGKFSYSLSASYRRSDGYRYNDPDLRNNdGYENTSLNARLGyKLGDNGSLSLSGGYSDSERGYPGAVG------- 221
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 499957344 279 eYGDNVFKQVRGDDQFGAGSDLCMYAYGNVSYNKASTDRNTVYVDANYEIAEDLEW 334
Cdd:COG4206 222 -SDRNLRLSLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLSY 276
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
355-867 |
1.15e-29 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 123.73 E-value: 1.15e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 355 NWNNMAADNPHNPFDVEAKGYFRWVG------IGTRDGNVDDYNQDYLTGLRGTISALNDAEWEVYYHHNIADNKSIGEY 428
Cdd:pfam00593 1 GWQLSLDLLGDDTLLTLGYDYSRYTDgldlglTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLST 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 429 YLSYSGLAYNEANGIDLGSEAGINNMKATTLTQGSAIFDQYNAGIGFDA-FELPGGSVAHYVGLEYFDQQYsevyDAQSE 507
Cdd:pfam00593 81 LRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLsHDLLLGVELRTAGLDYRRLDD----DAYDP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 508 AGLIGGSAGNSAAGDRQVWAMFYEAVLPITDDIELNLAARYDDYSDFGDNIA--------------PKAAIRWQALENVV 573
Cdd:pfam00593 157 YDPANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNgggdnfsrsysafsPRLGLVYKPTDNLS 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 574 VRASYSEAFRAPALDQLFAATtfsaedgidkpyceatgtpcSERQFDTYISANKELGPETSQYVNFGVAWDiVDDIGLKV 653
Cdd:pfam00593 237 LYASYSRGFRAPSLGELYGSG--------------------SGGGGGAVAGGNPDLKPETSDNYELGLKYD-DGRLSLSL 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 654 DYFNLNIDDVIAQRSITSVMTGIYegtlapsntfyvkrdpasagqaigaasevgTGYSNANTLEISGIDVALNAKFETNI 733
Cdd:pfam00593 296 ALFYIDIKNLITSDPDGPGLGGTV------------------------------YTYTNVGKARIRGVELELSGRLWGLG 345
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 734 GDIGfnwtnsfVLDYTEEVDGGAESRDTSGWNGQPDYKSVFTTNYR--MGDHSLSWNMNYTS-STFYFEDDASKGELDSW 810
Cdd:pfam00593 346 LSGG-------GYTYTDADDDADADDTGNPLPNVPRHTANLGLTYDfpLGGWGARLGARYVGsGERRYGDAANTFKTPGY 418
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 499957344 811 LIHNISYVYDAGNYGSILLGINNLTDEDPVLSPDGKFENADLYNNYGREYRASYTLK 867
Cdd:pfam00593 419 TLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
43-868 |
2.02e-22 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 103.04 E-value: 2.02e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 43 VTGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALRnsnlnsfgsfsERSG----SSAQSQATINLRGAGSSRTLVLI 118
Cdd:PRK10064 35 VTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLK-----------EVPGvqltNEGDNRKGVSIRGLDSSYTLILI 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 119 DGKRFPG-SPTLGGASANLNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNYQgiefnvgggsrdrdggltske 197
Cdd:PRK10064 104 DGKRVNSrNAVFRHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQ--------------------- 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 198 fsvvagyqmdkgnitfafdhqdrkgisdadrdftaPWMEDLNGDGVIQAYSETdGWSYYGasvkgpdGIYQPSPLCGDLa 277
Cdd:PRK10064 163 -----------------------------------KWHGTVTVDTTIQEHRDR-GDTYNG-------QFFTSGPLIDGV- 198
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 278 aeygdnvfkqvrgddqfgagsdLCMYAYGNVSYNKASTDRNTVYVDANyeIAEDLEWFgrvmvTQSNSFGRYAPPAANWN 357
Cdd:PRK10064 199 ----------------------LGMKAYGSLAKREKDDPQNSTTTDTG--ETPRIEGF-----TSRDGNVEFAWTPNQNH 249
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 358 NMAAdnphnpfdveakGYfrwvGIGTRDGNVDDYNQDYLTglRGTISALNDAEW-----EVYYHHNIADNKSIGEyylsy 432
Cdd:PRK10064 250 DFTA------------GY----GFDRQDRDSDSLDKNRLE--RQNYSLSHNGRWdygnsELKYYGEKVENKNPGN----- 306
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 433 SGLAYNEANGIDlgseaginnmkattltqgsaifdqynagigfDAFELPGGSVAHYV--GLEYfdqQYSEVYDAqseAGL 510
Cdd:PRK10064 307 SSPITSESNSID-------------------------------GKYTLPLTAINQFLtfGGEW---RHDKLSDA---VNL 349
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 511 IGGSAGNSAAgdRQvWAMFYEAVLPITDDIELNLAARYDDYSDFGDNIAPKAAIRWQALENVVVRASYSEAFRAPALDQL 590
Cdd:PRK10064 350 TGGTSSKTSA--SQ-YALFVEDEWRIFEPLALTTGVRMDDHETYGDHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQL 426
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 591 FAA-TTFSAEDGidkpyCEATGTPcserqfdtyisankELGPETSQYVNFGVAWD----IVDDIGLKVDYFNLNIDDVIA 665
Cdd:PRK10064 427 SPDwTSNSCRGA-----CKIVGSP--------------DLKPETSESWELGLYYMgeegWLEGVESSVTVFRNDVDDRIS 487
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 666 QRSITSVmtgiyegTLAPSNTFYVKRDPASAGQAIGAASevgtgYSNANTLEISGIDVALNAKFETNIgDIGFNWTNSFV 745
Cdd:PRK10064 488 ISRTSDV-------NAAPGYQNFVGFETNGRGRRVPVFR-----YYNVNKARIQGVETELKIPFNDEW-KLSLNYTYNDG 554
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 746 LDYTEEVDGGAESRDTSGWNGQPDYKSVFTTnyrmgDHSLSWNMNYTSSTFYF-EDDASKGELDSWlihNISYVYDAGNY 824
Cdd:PRK10064 555 RDVSNGENKPLSDLPFHTANGTLDWKPLALE-----DWSFYVSGNYTGQKRADsATAKTPGGYTIW---NTGAAWQVTKD 626
|
810 820 830 840
....*....|....*....|....*....|....*....|....
gi 499957344 825 GSILLGINNLTDEDpvLSPDgKFEnadlYNNYGREYRASYTLKF 868
Cdd:PRK10064 627 VKLRAGVLNLGDKD--LSRD-DYS----YNEDGRRYFMAVDYRF 663
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
54-166 |
1.63e-21 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 90.02 E-value: 1.63e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 54 EGASPITTITTEDMKMEGNFTVADALRN-SNLNSFGSFSERSGSsaqsqatINLRGAGSSRTLVLIDGKRFPGSptlGGA 132
Cdd:pfam07715 4 DTPGSVSVVTAEDIEDQGATNLADALRGvPGVSVSSGGGGGGSS-------ISIRGFGSNRVLVLVDGVPLNSG---GGG 73
|
90 100 110
....*....|....*....|....*....|....
gi 499957344 133 SANLNAIPMAAVERIEILTDGASSTYGSDAIAGV 166
Cdd:pfam07715 74 SVDLNSIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
39-868 |
1.05e-20 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 97.46 E-value: 1.05e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 39 ERIEVTGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALRN-SNLnsfgSFSERSGSSAQSqatINLRGAGSSRTLVL 117
Cdd:TIGR01785 2 DTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTvPGV----DVTGGGRPPGQS---INIRGLQDNRVLVV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 118 IDGKRFPGspTLGGASANLNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNYQGIEFNvgggsrdrdggltsKE 197
Cdd:TIGR01785 75 VDGARQNY--QRGGAHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLRPG--------------QL 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 198 FSVVAGYQMDKGNITFAFDHqdrkgiSDADRdftapwmEDLNGDGVIQAYsetdgwsyygasvkgpdgiyqpsplcgdla 277
Cdd:TIGR01785 139 FGGLAKLSYGSNNNSFGGSV------AVAGR-------LDDNLDALVAAT------------------------------ 175
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 278 aeygdnvfkqVRGDDQFGAGSDLCMYAYGNVSYNKAStdRNTVYVDANYEIAedlewFGrvMVTQSNSfgryappaanwn 357
Cdd:TIGR01785 176 ----------YRDGGNYRNGNKEEATNSAYVQKNLLA--KLGWQLDDAQRLE-----FS--YFTTEGS------------ 224
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 358 nmaADNPHNPFDVEAKGYFRWVGIGTRDGNVDDYNQDYLTGLRGtiSALNDAEWEVYYHHNIADNKSIGEYYLSYSGLAY 437
Cdd:TIGR01785 225 ---LDEAQNSGPGTEYVLGSSSTLLASSTRDRSATLTYNWTPED--NPWLDATASLYYNRTENDNDRSARGVGREEGYQY 299
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 438 NEaNGIDLgseagiNNmkattltqgsaifdqynagigfdAFELPGGSVAHYV-GLEYFDQQYSEVYDAQSEAGLIggsAG 516
Cdd:TIGR01785 300 TT-YGATL------QN-----------------------TSRFDVASWSTLTyGVDWMKDKRRTESFDPNSVTTI---VP 346
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 517 NSAAGDRQVWAMFYEAVLPITDD-IELNLAARYD------------DYSDFGDN-IAPKAAIRWQALENVVVRASYSEAF 582
Cdd:TIGR01785 347 NPPSAKEYFFGLFLQDNIPLLDDrLTLSAGLRYDhyklspkttadtEAVDRSYSrWSPSLGLSYKPVDWLTLYASYSQGF 426
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 583 RAPALDQLFAAttfSAEDGIDKPYCeatgtpcserqfdtyISANKELGPETS--QYVNFGVAWDIV----DDIGLKVDYF 656
Cdd:TIGR01785 427 RAPSIDELYGT---GDHPGTPGGYT---------------FAPNPNLKPETSktWELGANLSFDNLlldnDQLQFKVAYF 488
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 657 NLNIDDVIAQRSitsvmtGIYEGTLAPSNTFyvkrdpasagqaigaasevgTGYSNANTLEISGIDVALNAKFEtnigdi 736
Cdd:TIGR01785 489 YNDVKDFIDLTI------GVTDNVTAGMNNI--------------------TQYVNIDGARIRGIEASASYDAG------ 536
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 737 gfNWTNSFVLDYTEevdgGAESRDTSGWNGQPDYKSVFTTNYRMGDH--SLSWNMNYT---SSTFYFEDDASKG--ELDS 809
Cdd:TIGR01785 537 --LWATGLSYGYTI----GKDQNTNQWLSNIPPLKLVVTVGYRFPDRrlDLGAKAAYYerqSESPTTEDVAANGllTTPG 610
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499957344 810 WLIHNI--SYVYDAGNYGSILLGINNLTDEDPVLSPDgkfenaDLYNNYGREYRASYTLKF 868
Cdd:TIGR01785 611 YTVVDLyaTYQPNAVKGLTVRFGVNNLTDRKYTPAQS------VPGAGPGRNFKGSVKYQF 665
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
41-868 |
3.59e-18 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 89.39 E-value: 3.59e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 41 IEVTGSRIKRSDLEGASPI----TTITTEDMKMEGNFTVADALR-NSNLnsfgSFSERSGSSAQSqatINLRGAGSSRTL 115
Cdd:TIGR01786 3 ITVTATRTADPQRRDLSVTpasvSVISREQLKSQQVRNLRDLLRyEPGV----SVVEGGRGGSQG---INIRGLDKNRVA 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 116 VLIDGKRFPGSPT-LGGASANLNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKknyqgiefnvgggsrdrdgglt 194
Cdd:TIGR01786 76 VLVDGIRQNTSYGgQGSTFYAINSIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTK---------------------- 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 195 skefsvvagyqmdkgnitfafdhqdrkgisDAdRDFTAPwmEDLNGDGVIQAYSETDGwsyygasvkgpdgiyqpsplcg 274
Cdd:TIGR01786 134 ------------------------------DA-ADLLKP--GKDLGGLSKLGYSSANN---------------------- 158
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 275 dlaaEYGDNVFKQVRGDDQFGagsdLCMYAYGNV----SYNKASTDRNTVYVDANYEIAEDLEWFGRVMV--TQSNSFG- 347
Cdd:TIGR01786 159 ----RFTQSVAAAGRNDDVDA----LVQATYRRGhelkNGNKANIGNESKRSKPNPSDYKSQSFLAKLGWqlNDAHRLGl 230
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 348 --RYAPPAANWNNMAADNPHNPFDVEAKGYFRWVgIGTRDGNVDDYNQDYltGLRGTISALNDAEWEVYYHHNIADNKSI 425
Cdd:TIGR01786 231 slEYTQTDYDEPEMTNTSYLTKPLGAPLLSSTVV-LGDSKTRDRRTGLDY--ELNPDNSWLDTVKLALDKQYIQLYNYLN 307
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 426 GEYYLSYSGLAYNEANgidlgsEAGINNMKATTLTQGSAIFDQY--NAGIGFDAFELpggsvahyvgleyfDQQYSEVYD 503
Cdd:TIGR01786 308 ATSASDYPGVDKNGRY------KDKYDYYTLGFDTNNKIEFSVHslSLTYGLDRFKD--------------KVSTGDSRR 367
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 504 --AQSEAGLIGGSAGNSAAGDRQVWAmFYEAVLPITDDIELNLAARYDDY---------------SDFGDNIAPKAAIRW 566
Cdd:TIGR01786 368 nlPTAAYNLYGYEGENRPVKGSNFGL-FLQDNIKLGDWLSLSAGLRYDHYktdpkadeskdygaiSKTYSRWSPSLGLTY 446
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 567 QALENVVVRASYSEAFRAPALDQLFaaTTFSAEDGidKPYCeatgtpcserqfdtyISANKELGPETSQYVNFGVAWDIv 646
Cdd:TIGR01786 447 KPTPWLTLYYSYSQGFRAPSFDELY--GTGAHPGG--GPYT---------------FLPNPNLKPETSKNWEIGINLHF- 506
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 647 DDIGLKVDYFNLNIDDVIAQRSitsvmtgiyegtlapsntfyvKRDPASAGQAIGAASEvgTGYSNANTLEISGIDvaLN 726
Cdd:TIGR01786 507 DQLDFKVSYFRNDYKDFIDLGI---------------------GVTAKGNMAQVGSNTI--TNYVNIDNARIRGIE--LS 561
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 727 AKFETNIGDIGFN-WTNSFVLDYTEevdgGAESRDTSGWNGQPDYKSVFTTNYRMGDH--SLSWNMNY--------TSST 795
Cdd:TIGR01786 562 GRYDLGSFFSGPDgWTTTLKYGYTK----GKDSDTNPWLNAITPLKVVLGLGYDHPDEkwGVGLTLTFsgakdavdAYAT 637
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499957344 796 FYFEDDASKGEL---DSWLIHNISYVYDAGNYGSILLGINNLTDED--PVLSPDGKFENADLYNNYGREYRASYTLKF 868
Cdd:TIGR01786 638 YYENGEAAKAGPlrtPSYTVVDLYGYYKPNKNLTLRFGVYNLLDRKytTWESARQAGPLATGYTAPGRNYKASVEYKF 715
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
56-868 |
9.43e-17 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 84.77 E-value: 9.43e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 56 ASPITTITTEDMKMEGNFTVADALRNSnlnSFGSFSERSGSSaqSQATINLRGAGSSrtlVLIDGKRFPGSPTLggASAN 135
Cdd:TIGR01783 3 PQSVSVITRQELEDQQAGSLSEALQRV---PGVVVGGSGGTT--QFGNITIRGFGLE---VDIDNVYLDGVPLL--SRGN 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 136 LNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKnyqgiefnvgggsrdrdggLTSKEFSVVAGYQMDKGNITFAF 215
Cdd:TIGR01783 73 LAIVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKR-------------------PQDEPKGSVTFGAGTRSGYRTAF 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 216 DHQDRKGisdADRDFTApwmeDLNGDGviqayseTDGWSYYGASVKGPDGIYqpspLCGDLAAEygDNVFKQVRGDDQFG 295
Cdd:TIGR01783 134 DLGGPLG---ADGTFRG----RLNGAR-------QDGDSFYDGAGEETRLGA----TATDWQLD--DRTLLRLGAYYQKE 193
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 296 AGsdlcMYAYGNVSynkastdrntvyvdanyeiaedlewFGRVMVTQSNSFGRYAPPAANWNnmaadnphnpfdveakgY 375
Cdd:TIGR01783 194 RD----RGGYGGLP-------------------------ASGGTSGRDLSSDRYLGTSSNRN-----------------Y 227
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 376 FRWVGIGTRDGNVDDYNQDYltglrgtisalnDAEWEVYYHHNIADNKSIGEYylsysglAYNEANGiDLGSEAGINNMK 455
Cdd:TIGR01783 228 DDREYLSYGLSLEYQFNDVW------------TGKQNLRYSYFDTDSNQVQAS-------GYSSDGG-LFGRSLTVVNVK 287
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 456 ATtltqgsaiFDQYNAGIGFDaFELpgGSVAHYVGLEYFDQQYSEV--------------YDAQSEAGLIGGSAGNSAAG 521
Cdd:TIGR01783 288 QD--------RVQIDAGLDGE-FET--GPIEHDLLLGVSYGQRTTNrfnntgypsdniysLTATSSARTDIGDSPKDRAL 356
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 522 DRQVWA--MFYEAVLPITDDIELNLAARYD-------------DYSDFGDNIAPKAAIRWQALENVVVRASYSEAFRAPA 586
Cdd:TIGR01783 357 SSTTKAlnGVALQRILLADKWTLTLGGRYDsvdvksnngvagsTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGG 436
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 587 LDQLFAattfsaedgidkpyceatgtpcserqfdtyISANKELGPETSQYVNFGVAWDIVDDIGLKVDYFNLNIDDVIAQ 666
Cdd:TIGR01783 437 YYPKGA------------------------------GNSGDILEPEKGKNYELGVRYDLGDSLLATAALFRITKDNQLVQ 486
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 667 RSITsvmtgiyegtlapsNTFYvkrdpasagqaigaaseVGTGYSNANTLEISGIDVALnakFETNIgDIGFNWTNSfvl 746
Cdd:TIGR01783 487 DPVN--------------GTFS-----------------VNAGKTRNRGVELEARGYLT---PGLSL-SAGYTYTDA--- 528
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 747 DYTEEVDGGAESRDTSgwnGQPDYKSVFTTNYRMGDHS----LSWNMNYTSStfYFEDDASKGELDSWLIHNISYVYDAG 822
Cdd:TIGR01783 529 EFTEDTNGDTQGNTVP---FVPKHTASLWASYAPPVGDngltLGGGVQYTGK--AYVDGGNTGKVPSYTVVDLSVRYDLT 603
|
810 820 830 840
....*....|....*....|....*....|....*....|....*...
gi 499957344 823 NY--GSILLGINNLTDEDPVLSPDGKFENADLYNNYGREYRASYTLKF 868
Cdd:TIGR01783 604 KKknLTLALNVNNLFDRDYYTSGYRWGPSAYIYPGAPRTVGLSVSYDF 651
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
43-667 |
2.31e-16 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 83.66 E-value: 2.31e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 43 VTGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALRNSNlnsfGSFSERSGSSAQsqatINLRGAGSSRTLVLIDGKR 122
Cdd:PRK13513 40 VTASGFQQRIQDAPASISVVTREQLENKAYRDVTDALKDVP----GVVVTGGGSTSD----ISIRGMAAKYTLILVDGKR 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 123 F------PGSPTLGGASANLNaiPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKnyqgiefnvgggsrdrdgglTSK 196
Cdd:PRK13513 112 VdtrstrPNSDGSGIEQGWLP--PLAAIERIEVVRGPMSSLYGSDAMGGVINIITRK--------------------VQK 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 197 EfsvvagyqmdkgnitfafdhqdrkgisdadrdftapWMEDLNGDGVIQAySETDGWSYYGAsvkgpdgIYQPSPLCGDL 276
Cdd:PRK13513 170 E------------------------------------WHGSLRADATLQE-DSKSGDIFQTN-------AYASGPLIDGL 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 277 aaeYGDNVFKQV--RGDDQFGAGSDLCMYAYGNVSYNKASTDRNTVyvdaNYEIAEDLEwfgrvmvtqsnsfGRYAPP-- 352
Cdd:PRK13513 206 ---LGLKVSGLLshRSEDKIIDGYNEQRMRNGTATFSLTPDDNNEF----DFEIGRYVQ-------------DRNSTPgr 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 353 --AANWNNMAADNPHNPFDVEAKGYFrwvgigtRDGNVDDYNQDYLTglrgtisalNDAEWEVYYHHNIADNKSIgeyyl 430
Cdd:PRK13513 266 tlALNGTNSDTQYDRNNYAITHNGYY-------DFGNSTSYIQRDET---------RNPSRQMKSVDTIFNTQTS----- 324
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 431 sysglayneangIDLGSEaginnmkatTLTQGSaifdQYnagigfdafelpggsvahyvgleyfdqQYSEVYDAQSEAgl 510
Cdd:PRK13513 325 ------------FLLDDH---------TLSLGG----QY---------------------------RYEELYDKGNQL-- 350
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 511 igGSAGNSAAGDRQVWAMFYEAVLPITDDIELNLAARYDDYSDFGDNIAPKAAIRWQALENVVVRASYSEAFRAPALDQl 590
Cdd:PRK13513 351 --PSASDLNKLTRWSWALFAEDEWQMTNDFALTGGIRMDQDQNYGTHWTPRLYGVWHLADQWTLKGGVSTGYRSPDLRQ- 427
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499957344 591 faattfSAEDgidkpYCEATGTpcseRQFDTYISANKELGPETSQYVNFGVAWDIVDDIGLKVDYFNLNIDDVIAQR 667
Cdd:PRK13513 428 ------ATDN-----WGQLTGG----GGLPALILGNSDLKPEKSISQEIGILWDNQENLNASVTLFNTDFKDKITEV 489
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
43-838 |
2.34e-16 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 83.53 E-value: 2.34e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 43 VTGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALRnsnlnSFGSFSERSGSSAQSQATINLRGAGSSRTLVLIDGKR 122
Cdd:PRK13486 30 VSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALR-----SVEGVDVESGTGKTGGLEISIRGMPASYTLILIDGVR 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 123 FPGSPTL---GGASANLNAIP-MAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNyqgiefnvgggsrdrdggltskef 198
Cdd:PRK13486 105 QGGSSDVtpnGFSAMNTGFMPpLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKN------------------------ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 199 svvagyqmdkgnitfafdhqdrkgisdADRdftapWMEDLNGDGVIQaysETDGWsyyGASVKGpdGIYQPSPLCgdlaa 278
Cdd:PRK13486 161 ---------------------------ADK-----WLSSVNAGLNLQ---ESNKW---GNSSQF--NFWSSGPLV----- 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 279 eyGDNVFKQVRGDDQFGAGSDLcmyaygnVSYNKASTDRNTVYVDA-NYEIAEDLEWfgrvMVTQSNSFgryappaanWN 357
Cdd:PRK13486 196 --DDSVSLQVRGSTQQRQGSSV-------TSLSDTAATRIPYPTESqNYNLGARLDW----KASEQDVL---------WF 253
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 358 NMaaDNPHNPFDveakgyfrwvgigTRDGNVDDYNQDYLTGLR--------GTISALNDAEWEVYYHHNIADNKSigeYY 429
Cdd:PRK13486 254 DM--DTTRQRYD-------------NRDGQLGSLTGGYDRTLRyernkisaGYDHTFTFGTWKSYLNWNETENKG---RE 315
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 430 LSYSGLAYNEAngidlGSEAGINNMKATTLTQGSAIFDQYnagigfdafelpGGSVAHYVGLEYfdqqysevYDAQSEAG 509
Cdd:PRK13486 316 LVRSVLKRDKW-----GLAGQPRELKESNLILNSLLLTPL------------GESHLVTVGGEF--------QSSSMKDG 370
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 510 LIGGSAGNSAagDRQVWAMFYEAVLPITDDIELNLAARYDDYSDFGDNIAPKAAIRWQALENVVVRASYSEAFRAPALDQ 589
Cdd:PRK13486 371 VVLASTGETF--RQKSWSVFAEDEWHLTDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQ 448
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 590 LFaattfsaedgidkpyceaTGTPCSERQFDTYISANKELGPETSQYVNFGVAWDivddiglKVDYFNLNIDDVIAQRSI 669
Cdd:PRK13486 449 LH------------------KGISGVSGQGKTNLLGNPDLKPEESVSYEAGVYYD-------NPAGLNANVTGFMTDFSN 503
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 670 TSVMTGIYEGTLAPSNTfyvkrdpasagqaiGAASEVGTGYSNANTLEISGIDVALNakfetnigdigFNWTNSfvldyt 749
Cdd:PRK13486 504 KIVSYSINDNTNSYVNS--------------GKARLHGVEFAGTLPLWSEDVTLSLN-----------YTWTRS------ 552
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 750 EEVDGGAESRDTS-----------GWNGQPDYKSVFTTNYRmgDHSLSWNMNYTS-STFYFEDDASKGE-LDSWLIHNIS 816
Cdd:PRK13486 553 EQRDGDNKGAPLSytpehmvnaklNWQITEEVASWLGARYR--GKTPRFTQNYSSlSAVQKKVYDEKGEyLKAWTVVDAG 630
|
810 820
....*....|....*....|..
gi 499957344 817 YVYDAGNYGSILLGINNLTDED 838
Cdd:PRK13486 631 LSWKMTDALTLNAAVNNLLNKD 652
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
32-868 |
5.52e-16 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 82.52 E-value: 5.52e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 32 DEDGAKVERIEVTGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALRNSNlnsfGSFSERSGSSAQsqatINLRGAGS 111
Cdd:PRK13483 27 AAPDKTMETVVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVP----GVVVTGGGDRTD----ISLRGMGS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 112 SRTLVLIDGKR------FPGSPTLGGASANLNaiPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKnyqgiefnvggg 185
Cdd:PRK13483 99 QYTLILVDGKRqssretRPNSDGPGVEQAWTP--PLAAIERIEVIRGPMSSLYGSDAIGGVINIITRK------------ 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 186 srdrdgglTSKEfsvvagyqmdkgnitfafdhqdrkgisdadrdftapWMEDLNGDGVIQAYSETdGWSYYGasvkgpdG 265
Cdd:PRK13483 165 --------VPNE------------------------------------WQGEVRLDTTLQENSDS-GNVYQA-------N 192
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 266 IYQPSPLCGDLaaeYGDNVFKQV--RGDDQFGAGsdlcmyaYGNVSyNKASTDRNTVYVDANYEIAEDLewfGRVMVTQS 343
Cdd:PRK13483 193 FFVNGPLIKDL---LGLQLYGQYtqREEDDIEGG-------YRDKD-ARSLTAKLALTPNEDHDIMLEV---GTSNQERD 258
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 344 NSFGRYAPPAANWnnmaadnphnpfdvEAKGyfrwvgigtRDGNVDDYNQDYltgLRGTISALNDAEWEV-----YYHHN 418
Cdd:PRK13483 259 STVGKTVAPLAPG--------------ESCG---------RRGCPESSTTEY---ERSTVSLSHTGRWDFgtsdtYIQHE 312
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 419 IADNKSigeyylsysglayneangidlgSEAGINNMKATTltqgsaifdQYNAGIGfdafelpggsVAHY--VGLEYFDQ 496
Cdd:PRK13483 313 EFDNKS----------------------REMKIKNTDFQS---------SLVAPLG----------QEHTltFGAAYNHQ 351
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 497 QYSEvydaqseagliggSAGNSAAG----DRQVWAMFYEAVLPITDDIELNLAARYDDYSDFGDNIAPKAAIRWQALENV 572
Cdd:PRK13483 352 DLTD-------------ETSNQISDltdiSRTQWAVFSEDEWRIADDFALTGGLRLDHDENFGGHVSPRVYGVWNLAPSW 418
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 573 VVRASYSEAFRAPALDQLFAATTFSAEDGidkpyceatgtpcserqfdtYISANKELGPETSQYVNFGVAWDIVDDIGLK 652
Cdd:PRK13483 419 TVKGGVSTGFRAPSLRQTTPDWGQVSRGG--------------------NIYGNPDLKPETSLNKELGLYYDLGSGLTAS 478
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 653 VDYFNLNIDDviaqrSITSVMTGIYEGTLAPsNTFyvKRDPasagqaigaasevgTGYSNANTLEISGIDVALNAKFETN 732
Cdd:PRK13483 479 LTVFYNEFKD-----KITRVACPATQCTDGP-NQF--GADP--------------TTYVNIDEAVTQGVEASLSYPITST 536
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 733 IGDIGfNWTnsfvldYTeevdggaESRDTSG-WNGQ-----PDYKSVFTTNYRMGDHSLSW-NMNYTSStfyfEDDASKG 805
Cdd:PRK13483 537 LSLSG-NYT------YT-------DSEQKSGaYKGSplnqlPKHLFQASLNWEPTDRLNSWaRVNYRGE----ESQPTTG 598
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 806 ELDSWLIHNiSYVY-DAG-NYG-----SILLGINNLTDEDPVLSPDGKFENadlynnyGREYRASYTLKF 868
Cdd:PRK13483 599 PSSSSFIAP-SYTFlDLGaNYQltdnlKLSAGIYNLFDKEINYEEYGYVED-------GRRYWLGMTYSF 660
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
33-838 |
7.06e-16 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 81.90 E-value: 7.06e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 33 EDGAKVERIEVTGSRIKRSDLE---GAspITTITTEDMKMEGNFTVADALRNS-NLNsfgsFSERSGSSAQSQatINLRG 108
Cdd:COG4772 18 EAATTLETVVVTGSRAAEARLKdvpGS--VSVVDREELENQAATSLREVLRRVpGVN----VQEEDGFGLRPN--IGIRG 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 109 AG---SSRTLVLIDGkrFPGSPTLGGASANLNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNYQGIEFNVGGG 185
Cdd:COG4772 90 LGprrSRGITLLEDG--IPIAPAPYGDPAAYYFPDLERMERIEVLRGAAALRYGPQTVGGAINFVTRTIPTAFGGELRVT 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 186 SRDRDggltSKEFSVVAGYQMDKGNITFAFDHQDrkgiSDADRDFTAPWMEDLNGDGVIQAySETDGWSYYGASVKGPDG 265
Cdd:COG4772 168 GGSFG----YRRTHASVGGTVGNFGYLVEYSRKR----GDGFRDNSGFDINDFNAKLGYRL-SDRQELTLKFQYYDEDAN 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 266 IYqpsplcGDL-AAEYGDNVFKQVRGDDQFgagsdlcmyaygnvsynkaSTDRNTVYVDANYEIAEDLEWFGRVMVTQSN 344
Cdd:COG4772 239 TP------GGLtDAQFDADPRQSYRPADQF-------------------DTRRTQLSLRYEHQLSDNTTLTTTAYYNDFS 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 345 SFGRYAPPAANWNNMAADNPHNPFDveakgyFRWVGIGTR---DGNVDDYNQDYLTGLRgtisalndaewevYYHHNIAD 421
Cdd:COG4772 294 RNWYIRQNTADPNTPGLGLRGNPRG------YRSYGIEPRlthRFELGGVPHTLEVGLR-------------YHREEEDR 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 422 NKSIGEYYLSYSGLAYNEANgidlgseagINNMKATtltqgsAIFDQYNAGIGfDAFEL-PGgsvahyVGLEYFDQQYSE 500
Cdd:COG4772 355 KQYVNTYGQGRSGAGLRRDR---------RFSADAL------AAYAQNRFELT-GRLTLtPG------LRYEHIRRDRTD 412
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 501 VYDAQSeagliggSAGNSAAGDRQVWamfyeavlpitddielnlaaryddysdfgdniAPKAAIRWQALENVVVRASYSE 580
Cdd:COG4772 413 RYSTRT-------GGDDSGSNSYSEF--------------------------------LPGLGLLYQLTDNLQLYANVSR 453
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 581 AFRAPALDQLFAATTFsaedgidkpyceatgtpcserqfdtyisaNKELGPETSQYVNFGVAWDIVDDIGLKVDYFNLNI 660
Cdd:COG4772 454 GFEPPTFGDLAYGNGG-----------------------------NPDLKPEKSWNYELGTRGRIGNGLSAEVALFYIDY 504
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 661 DDVIAQRSitsvmtgiyegtlapsntfyvkrdpasagqaigAASEVGTGYSNANTLEISGIDVALNAKFETNiGDIGFNW 740
Cdd:COG4772 505 DNELGSCS---------------------------------AAGGDRSTFTNAGETRHQGLELALDYDLLKG-GGLGLPL 550
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 741 TNSFvlDYTEevdggAESRDTSGWN-------GQPDYKSVFTTNYRMGDHSLSWNMNYTSSTFY----FEDDASKGELDS 809
Cdd:COG4772 551 FAAY--TYTD-----AEFTSDFGPVfagnrlpYVPRHQLTAGLGYEHGGWTANLNGRYVSEQFTdaanTVADGSFGKIPS 623
|
810 820
....*....|....*....|....*....
gi 499957344 810 WLIHNISYVYDAGNYGSILLGINNLTDED 838
Cdd:COG4772 624 YTVLDLSASYDFGKNLSLFAGVNNLFDKR 652
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
43-293 |
1.49e-15 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 80.68 E-value: 1.49e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 43 VTGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALRNSNlnsfGSFSERSGSSAQSqATINLRGAGSSRTLVLIDGKR 122
Cdd:TIGR01779 33 VTANRFAQTASQTLAPVTIITRQDIERTQAKSLPELLRRLP----GVSIAQNGGRGQN-TSLFLRGTESDHVLVLIDGIR 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 123 FpGSPTLGGASanLNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNYQGIEFNVgggsRDRDGGLTSKEFSVVA 202
Cdd:TIGR01779 108 F-GSAAAGAAD--FQQLPVELVERIEYVRGPRSSLYGSEAIGGVINIITRRRSGGQGTTL----SAGLGSLDYQEYSIAS 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 203 GYQM-DKGNITFAFDHQDRKGIS---------DADRD-FTApwmEDLNGDGViqaYSETDGWSYYGaSVKGPDGIYQPSp 271
Cdd:TIGR01779 181 GVAIgENGWYSVALGTESTKGINvrpggpgvyDPDRDgFRS---DSLLLGGG---HRFDESWSLFV-NALRYENRNDYD- 252
|
250 260
....*....|....*....|..
gi 499957344 272 lcgdlAAEYGDNVFKQVRGDDQ 293
Cdd:TIGR01779 253 -----NYSFGTRLYKEAEKGDQ 269
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
37-662 |
2.16e-13 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 73.89 E-value: 2.16e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 37 KVERIEVTGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALRNSNlnsfgSFSERSGSSAQSqatINLRGAGSSRTLV 116
Cdd:PRK13484 29 KEDTLVVTASGFTQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVE-----GISITGGNEKPD---ISIRGLSGDYTLI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 117 LIDGKRFPGSPTLGGASANLNA---IPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKnyqgiefnvgggsrdrdggL 193
Cdd:PRK13484 101 LVDGRRQSGRESRPNGSGGFEAgfiPPVEAIERIEVIRGPMSSLYGSDAIGGVINIITKP-------------------V 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 194 TSKEFSVVAGYqmdKGNITfafDHQDRKGISDADRDFTAPWMEDLNGdgvIQAYsetdGWSYYGASvkgpDGIYQPSPlc 273
Cdd:PRK13484 162 NNQTWDGVLGL---GGIIQ---EHGKFGNSTTNDFYLSGPLIKDKLG---LQLY----GGMNYRKE----DSISQGTP-- 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 274 gdlaaeYGDNvfKQVRGDDQFgagsdlcmyaygnvsynkASTDRNTVYVDANYEIAEDLEWFGRVMVTQSNSFGRYAPpa 353
Cdd:PRK13484 223 ------AKDN--KNITATLQF------------------TPTESQKFVFEYGKNNQVHTLTPGESLDAWTMRGNLKQP-- 274
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 354 anwNNM-AADNPHNpfdveakgyfRWVGIGTRDGNVddynqdyltgLRGTISalndaeweVYYHHNIADNKSIGEyylsy 432
Cdd:PRK13484 275 ---NSKrETHNSRS----------HWVAAWNAQGEI----------LHPEIA--------VYQEKVIREVKSGKK----- 318
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 433 sglayNEANGIDLGSEAGINNMKATtltqgsaIFDQynagiGFDAFeLPGGSVAhyVGLEYfdqQYSEVYDAQSeaglIG 512
Cdd:PRK13484 319 -----DKYNHWDLNYESRKPEITNT-------IIDA-----KVTAF-LPENVLT--IGGQF---QHAELRDDSA----TG 371
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 513 GSAGNSAAGDRQVWAMFYEAVLPITDDIELNLAARYDDYSDFGDNIAPKAAIRWQALENVVVRASYSEAFRAPALDQLFA 592
Cdd:PRK13484 372 KKTTETQSVSIKQKAVFIENEYAATDSLALTGGLRLDNHEIYGSYWNPRLYAVYNLTDNLTLKGGIAKAFRAPSIREVSP 451
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 593 ATTFSAEDGIDKPYceatgtpcserqfdtyisANKELGPETSQYVNFGVAWDIVDDIGLKVDYFNLNIDD 662
Cdd:PRK13484 452 GFGTLTQGGASIMY------------------GNRDLKPETSVTEEIGIIYSNDSGFSASATLFNTDFKN 503
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
43-182 |
6.10e-13 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 72.33 E-value: 6.10e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 43 VTGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALRNSNlnsfGSFSERSGSSAQSqATINLRGAGSSRTLVLIDGKR 122
Cdd:PRK10641 30 VTANRFQQPVSTVLAPTTVVTRDDIDRWQSKSVNDVLRRLP----GVDIAQNGGLGQL-SSLFIRGTNSSHVLVLIDGVR 104
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 123 FpGSPTLGGaSANLNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNYQGIEFNV 182
Cdd:PRK10641 105 L-NQAGISG-SADLSQIPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITTRDKPGTTLSA 162
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
32-639 |
5.35e-12 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 69.79 E-value: 5.35e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 32 DEDGAKVERIEVTGSRikrsDLEGASPITTITTEDMKMEGNFT-VADALRNS---NLNSfGSFSERSGSSAQsqatINLR 107
Cdd:PRK13528 30 DDDNGETMVVEATAEQ----ELKQQPGVSIITAEDIKKRPPVNdLSDIIRKMpgvNLTG-NSASGTRGNNRQ----IDIR 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 108 GAGSSRTLVLIDGK--------RFP--GSPTLGGASanlNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNyqg 177
Cdd:PRK13528 101 GMGPENTLILIDGVpvtsrnsvRYSwrGERDTRGDT---NWVPPEMVERIEVIRGPAAARYGSGAAGGVVNIITKRP--- 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 178 iefnvgggsrdrdgglTSKEfsvvagyqmdKGNITFafdhqdrkgisdadrdFTApwmedlngdgviQAYSETDGWSY-Y 256
Cdd:PRK13528 175 ----------------TNDW----------HGSLSL----------------YTN------------QPESSKEGATRrA 200
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 257 GASVKGpdgiyqpsPLCGDlaaeygdnvfkqvrgddqfgagsDLCMYAYGNvsYNKASTDRNTVYVDANYEIAEdlewfG 336
Cdd:PRK13528 201 NFSLSG--------PLAGD-----------------------ALTMRLYGN--LNKTDADSWDINSSAGTKNAA-----G 242
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 337 RVMVTQS--NSFGRYAPpaanwnnmaadNPHNPFDVEAkGYfrwvgigTRDGNVddYNQDYLTGLRGTIS---ALNDAEW 411
Cdd:PRK13528 243 REGVRNKdiNGVLSWKM-----------TPQQILDFEA-GY-------SRQGNI--YAGDTQNSNSSAVTeslAKSGKET 301
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 412 EVYYHHNIA-DNKSIGEYYLSYSGLAYNEANGIDL--GSEAGINNMKATTLTQGSAIFDQYNAGIGFD-AFELPGGSVAh 487
Cdd:PRK13528 302 NRLYRQNYGlTHNGIWDWGQSRLGFYYEKTNNTRMneGLAGGGEGRITADQTFTTSRLESYRTSGELNvPLNWLFEQTL- 380
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 488 YVGLEYFDQQYSEVYDAQSE--AGLIGGSAGnsAAGDR------QVWAMFYEAVLPITDDIELNLAARYDDYSDFGDNIA 559
Cdd:PRK13528 381 TVGAEWNRDELNDPSSTSLTvkDGDIGGISG--SAADRssknksEISALYVEDNIEPVPGTNLIPGLRFDYHSEFGSNWS 458
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 560 PKAAIRWQALENVVVRASYSEAFRAPALDQlfaattfSAEDGIdkPYCEATGTPCSERQFDTYISANKELGPETSqyVNF 639
Cdd:PRK13528 459 PSLNLSQELGDYFKVKAGIARAFKAPNLYQ-------SSEGYL--LYSRGNGCPKDITSGGCYLVGNKNLDPEIS--VNK 527
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
59-868 |
2.50e-11 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 67.21 E-value: 2.50e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 59 ITTITTEDMKMEGNFTVADALRN----SNLNSFGSFSERsgssaqsqatINLRGAgSSRTLVLIDGKRFPGSptlggasa 134
Cdd:COG4774 13 VTVVTRELIEDQGATSLADALRNvpgvTFGAGEGGNGDS----------FSIRGF-SASGDIYVDGLRDPGQ-------- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 135 nlNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKnyqgiefnvgggsrdrdggltskefsvvaGYQMDKGNITFA 214
Cdd:COG4774 74 --YRRDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKR-----------------------------PTDEPFTEVTLT 122
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 215 FdhqdrkgisdadrdftapwmedlngdgviqaysetDGWSYYGASVkgpdgiyqpsplcgDLAAEYGDNVFkqVRgddqF 294
Cdd:COG4774 123 Y-----------------------------------GSDGQRRATL--------------DVNGPLGDDLA--YR----L 147
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 295 GAgsdlcMYAYGNVSYNKASTDRNTVYVDANYEIAEDLEWFGRVMVTQSNSFGRYAPPAANWNnmaadnphNPFDVEAKG 374
Cdd:COG4774 148 NG-----MYRDSDSYRDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYGVPAVANG--------RPVDVDRST 214
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 375 YFrwvgigtrdGNVDDYN--QDYLTGLRGTisalndaewevyyhHNIADNKSIgeyylsYSGLAYNEANGIDLGSEAGIN 452
Cdd:COG4774 215 FY---------GQPDDYSdsETDSATLRLE--------------HDFNDNWTL------RNALRYSDYDRDYRNTYPTGG 265
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 453 NmKATTLTQGSAIFDQYNAGIGFDA---FELPGGSVAH--YVGLEYFDQQYSE-------------VYDAQSEAGLIGGS 514
Cdd:COG4774 266 N-ATGTVTRSAYRRDQDNDTLSNQTdltGKFDTGGVKHtlLAGVEYSREDSDNarysgggtaptvnLYNPVYGAPVTGPT 344
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 515 AGNSAA-GDRQVWAMFYEAVLPITDDIELNLAARYDDY-SDFGDNIA-------------PKAAIRWQALENVVVRASYS 579
Cdd:COG4774 345 LGGADNdSRTDTTGLYLQDTISLTDRWSLLAGLRYDRFdTDYTDRTTgattssyddsafsPRAGLVYKPTPNLSLYASYS 424
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 580 EAFRAPALDQLFAAttfsaedgidkpyceatgtpcserqfdtyisANKELGPETSQYVNFGVAWDIVDD-IGLKVDYFNL 658
Cdd:COG4774 425 TSFNPGGGAPSLSN-------------------------------AGQALDPEKSRQYEVGVKWDLLDGrLSLTAALFRI 473
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 659 NIDDVIAQrsitsvmtgiyegtlapsntfyvkrDPASAGQaigaasevgtgYSNANTLEISGIDVALNAKFETN---IGd 735
Cdd:COG4774 474 EKTNVRTT-------------------------DPANPGV-----------YVQTGEQRSRGVELEATGELTPGwsvLA- 516
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 736 iGFNWTNSFVLDYTEEVDGGAESRDTSGWNGqpdykSVFTTnYRMGDHSLSWN--MNYTSSTFYfeDDASKGELDSWLIH 813
Cdd:COG4774 517 -GYTYLDAEITKSANAANVGNRLPNVPRHSA-----SLWTT-YDLPLPGLTLGggVRYVGSRYA--DAANTVKLPSYTRF 587
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*
gi 499957344 814 NISYVYDAGNYGSILLGINNLTDEDPVLSPDGkfeNADLYNNYGREYRASYTLKF 868
Cdd:COG4774 588 DAGASYRLNKNLTLRLNVNNLTDKRYYASAYG---SGYVTPGAPRTVLLSASYRF 639
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
1-173 |
1.22e-10 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 65.44 E-value: 1.22e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 1 MHKNVLAKSVRLALISGAAAAAFASPAVFAADEDGAKVERIEVTGSRIKRSDLeGASpitTITTEDMKME--GNfTVADA 78
Cdd:PRK13524 1 MNKKIHSLALLVNLGIYGVAQAAEAEDAKTDDTPASHEDTIVVTAAEQNLQAP-GVS---TITAEDIRKRppAN-DVSEI 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 79 LRNS---NLnsfgsfserSGSSAQSQ----ATINLRGAGSSRTLVLIDGKRFPG--SPTLGGAS-----ANLNAIPMAAV 144
Cdd:PRK13524 76 IRTMpgvNL---------TGNSTSGQrgnnRQIDIRGMGPENTLILIDGKPVSSrnSVRYGWRGerdtrGDTNWVPPEMI 146
|
170 180
....*....|....*....|....*....
gi 499957344 145 ERIEILTDGASSTYGSDAIAGVVNIIMKK 173
Cdd:PRK13524 147 ERIEVLRGPAAARYGNGAAGGVVNIITKK 175
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
44-173 |
2.46e-08 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 57.60 E-value: 2.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 44 TGSRIKRSDLEGASPITTITTEDMKMEGNFTVADALRNSNlnsfGSFSERSGSSAQSQatINLRGAGSSRtlVLIDGkrf 123
Cdd:COG4773 54 TATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVP----GVTVSSYDGGGRDS--FSIRGFSIDN--YLRDG--- 122
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 499957344 124 pgsptLGGASANLNAIPMAAVERIEILTdGASST-YGSDAIAGVVNIIMKK 173
Cdd:COG4773 123 -----LPLGGFGGGQPDTANLERVEVLK-GPAGLlYGAGSPGGLVNLVTKR 167
|
|
| OMP_RagA_SusC |
TIGR04056 |
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade ... |
33-173 |
1.48e-05 |
|
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 274948 [Multi-domain] Cd Length: 981 Bit Score: 48.74 E-value: 1.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 33 EDGAKVERIEVTGSRI-KRSDLEGAspITTITTEDMKM--EGNFTVADALRNSNLNSFGSFSERSGSsaqsqATINLRGA 109
Cdd:TIGR04056 73 EDTQELDEVVVVGYGTqKKKSLTGA--VSTVKAKELKKvpVSNLSNALQGKVAGVIITQSSGEPGGD-----AEIWIRGI 145
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 110 GS----SRTLVLIDGkrFPGSPtlggasaNLNAIPMAAVERIEILTDgASST--YGSDAIAGVVNIIMKK 173
Cdd:TIGR04056 146 SSfggnNSPLYVIDG--VPRDN-------GLSDLNPEDIESISVLKD-ASATaiYGSRGANGVILITTKR 205
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
38-682 |
2.28e-05 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 48.10 E-value: 2.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 38 VERIEVTGSR--------IKRSDlegASPITTITTEDMKMEGNFTVADALRnsnlnsfgsfseR----SGSSAQSQA-TI 104
Cdd:TIGR01782 1 LDAVQVTGQRaslekaidAKRDA---DSVVDVISAEDIGKLPDVNVAEALQ------------RvpgvSIERDQGEGrYV 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 105 NLRGAGSSRTLVLIDGKRFPgSPTLGGASANLNAIPMAAVERIEILTdgaSSTYG--SDAIAGVVNIIMKK--NYQGIEF 180
Cdd:TIGR01782 66 SVRGLGPSYNRTTLNGRTIA-STDSGGRAFSLDLLPSELVSGVEVYK---TPTADmdEGGIGGTVDLRTRSpfDYDGRTL 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 181 NVGGGSRDRDGGLTSKEFSVVAGYQMDKGN-----ITFAFDHQDRKGISDadrdftapwmedlngdgviqaYSETDGWSY 255
Cdd:TIGR01782 142 SGSAQGGYNDLAGKDKPGPRGAASYSWTFGdgqfgVLLSASYQKRDFAED---------------------NVETENWGT 200
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 256 YGASVKGPDGIYQPSplcgdlAAEYGDNVFKQVR----GDDQFGAGSDLCMYAygNVSYNKASTDRNTVYVDANyeiaed 331
Cdd:TIGR01782 201 YTSADGGAQGLYFPR------GVRYRSYRNDRERkgvnGSLQWRPSDALELYL--DTLYSKYDDDETRQQIEFR------ 266
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 332 leWFGRVMVTQSNSFG--RYAPPAANWNNMAADNPHNPFDVEAK---------------------GY--------FRWVG 380
Cdd:TIGR01782 267 --TLNGGSTVITSNQTatSGALVQGTVANLQILVEARYNEEKETttsltlggewtgdrwtldgdlGYskatrdrpDRVTR 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 381 IGTRDGNVDDYNQDYLTGLRGTISALNDAEWEVY-------YHHNIADNKSIGEYYLSYSGLAYneaNGIDLGSEAGInn 453
Cdd:TIGR01782 345 FFTAPTPGYDFDYRGGPTLTLGTPADGDDASNYTnpangelRRTQISYQKAEDSEDAAQLDATF---DGPFTSLKFGV-- 419
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 454 mKATTLTQGSAIFDQYNAGIG---FDAFELPGGSVAHYVGLEYFDQQYSEVY---------DAQSEAGLIGGSAGNSAAG 521
Cdd:TIGR01782 420 -RYRRRDKTNRGSRYRRSIIGatgASGLAGVPSDLAGAGLDGGLGGPLTGWDpadldaflnAARGDAAGGGTYTYASTAP 498
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 522 D--------RQVWAMfyeAVLPITDDIELNLAARYDD--------------------YSDFG-----DNIAPKAAIRWQA 568
Cdd:TIGR01782 499 NtytvtedtTAAYAM---ANFDTGLRLRGNVGVRYERtdqtsdgwqsqpaangtgsvLVPVSadrdyTDVLPSLNLAYDL 575
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499957344 569 LENVVVRASYSEAFRAPALDQLFAATTFSaEDGIDKPYceaTGTpcserqfdtyiSANKELGPETSQYVNFGVAWDIVDD 648
Cdd:TIGR01782 576 TDDLVLRFAASKTITRPDFGDLAANTSLS-DDGTGGTV---TVS-----------GGNPDLKPYESDNLDLSLEWYFGPG 640
|
730 740 750
....*....|....*....|....*....|....
gi 499957344 649 IGLKVDYFNLNIDDVIAQRSITSVMTGIYEGTLA 682
Cdd:TIGR01782 641 GLLSAAVFYKDIKNFIVTTTSTETNDGGGGLVVA 674
|
|
| |
