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Conserved domains on  [gi|499582687|ref|WP_011263470|]
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FRG domain-containing protein [Aliivibrio fischeri]

Protein Classification

FRG domain-containing protein( domain architecture ID 10658176)

FRG domain-containing protein contains a conserved N-terminal (F/Y)RG motif

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FRG smart00901
This domain contains a conserved N-terminal (F/Y)RG motif. It is functionally uncharacterised;
33-126 1.19e-28

This domain contains a conserved N-terminal (F/Y)RG motif. It is functionally uncharacterised;


:

Pssm-ID: 214898  Cd Length: 103  Bit Score: 102.79  E-value: 1.19e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499582687    33 GGWLFRGHSDHSWPLIPKAGRPEFKVRGGSDWS----MFSIWKDKA-VAFTQLPENELECLAIAQHHGLATRLLDWSNNP 107
Cdd:smart00901   3 SRLLFRGQSDAYWPLVPSLFRKKGFYPDLLSSDderrLLRNFKRQApNRLDKSPSDDLEWLALAQHYGLPTRLLDWTTNP 82

                           90       100
                   ....*....|....*....|.
gi 499582687   108 LVATYFACKDLPE--VDAALY 126
Cdd:smart00901  83 LVALYFAVEDYSKedNDGVVY 103
 
Name Accession Description Interval E-value
FRG smart00901
This domain contains a conserved N-terminal (F/Y)RG motif. It is functionally uncharacterised;
33-126 1.19e-28

This domain contains a conserved N-terminal (F/Y)RG motif. It is functionally uncharacterised;


Pssm-ID: 214898  Cd Length: 103  Bit Score: 102.79  E-value: 1.19e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499582687    33 GGWLFRGHSDHSWPLIPKAGRPEFKVRGGSDWS----MFSIWKDKA-VAFTQLPENELECLAIAQHHGLATRLLDWSNNP 107
Cdd:smart00901   3 SRLLFRGQSDAYWPLVPSLFRKKGFYPDLLSSDderrLLRNFKRQApNRLDKSPSDDLEWLALAQHYGLPTRLLDWTTNP 82

                           90       100
                   ....*....|....*....|.
gi 499582687   108 LVATYFACKDLPE--VDAALY 126
Cdd:smart00901  83 LVALYFAVEDYSKedNDGVVY 103
FRG pfam08867
FRG domain; This presumed domain contains a conserved N-terminal (F/Y)RG motif. It is ...
 35-117 2.31e-26

FRG domain; This presumed domain contains a conserved N-terminal (F/Y)RG motif. It is functionally uncharacterized.


Pssm-ID: 430274  Cd Length: 93  Bit Score: 96.55  E-value: 2.31e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499582687   35 WLFRGHSDHSWPLIPKAGRPEFKVRGGSD-WSMFSIWKDKAVAFT-QLPENELECLAIAQHHGLATRLLDWSNNPLVATY 112
Cdd:pfam08867   3 YVYRGQRDADWRLIPSLYRLGGKKPSLKLeKRLLREFKKYARPRLeEEPENDWDWLALAQHYGLPTRLLDWTYSPLVALY 82


                  ....*
gi 499582687  113 FACKD 117
Cdd:pfam08867  83 FATED 87
 
Name Accession Description Interval E-value
FRG smart00901
This domain contains a conserved N-terminal (F/Y)RG motif. It is functionally uncharacterised;
33-126 1.19e-28

This domain contains a conserved N-terminal (F/Y)RG motif. It is functionally uncharacterised;


Pssm-ID: 214898  Cd Length: 103  Bit Score: 102.79  E-value: 1.19e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499582687    33 GGWLFRGHSDHSWPLIPKAGRPEFKVRGGSDWS----MFSIWKDKA-VAFTQLPENELECLAIAQHHGLATRLLDWSNNP 107
Cdd:smart00901   3 SRLLFRGQSDAYWPLVPSLFRKKGFYPDLLSSDderrLLRNFKRQApNRLDKSPSDDLEWLALAQHYGLPTRLLDWTTNP 82

                           90       100
                   ....*....|....*....|.
gi 499582687   108 LVATYFACKDLPE--VDAALY 126
Cdd:smart00901  83 LVALYFAVEDYSKedNDGVVY 103
FRG pfam08867
FRG domain; This presumed domain contains a conserved N-terminal (F/Y)RG motif. It is ...
 35-117 2.31e-26

FRG domain; This presumed domain contains a conserved N-terminal (F/Y)RG motif. It is functionally uncharacterized.


Pssm-ID: 430274  Cd Length: 93  Bit Score: 96.55  E-value: 2.31e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499582687   35 WLFRGHSDHSWPLIPKAGRPEFKVRGGSD-WSMFSIWKDKAVAFT-QLPENELECLAIAQHHGLATRLLDWSNNPLVATY 112
Cdd:pfam08867   3 YVYRGQRDADWRLIPSLYRLGGKKPSLKLeKRLLREFKKYARPRLeEEPENDWDWLALAQHYGLPTRLLDWTYSPLVALY 82


                  ....*
gi 499582687  113 FACKD 117
Cdd:pfam08867  83 FATED 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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