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Conserved domains on  [gi|499298536|ref|WP_010989486|]
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DUF3139 domain-containing protein [Listeria monocytogenes]

Protein Classification

DUF3139 domain-containing protein( domain architecture ID 10568326)

DUF3139 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3139 pfam11337
Protein of unknown function (DUF3139); This family of proteins with unknown function appears ...
 5-81 2.32e-23

Protein of unknown function (DUF3139); This family of proteins with unknown function appears to be restricted to Firmicutes.


:

Pssm-ID: 431823  Cd Length: 77  Bit Score: 85.86  E-value: 2.32e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499298536    5 KKWWITIGIVLILCVIGYVYWFVIPKHTANKAVDNYLAEQKIKSSQIETRVIKKDWKMGGYLTKIVFKDDSDLKYEY 81
Cdd:pfam11337   1 KKIKIILIILIILIVIGWVGHKPIQKYLGNKKLDKYLTEQGYKEDDIKSIKPKYDIKKGGYYYKVVFKDEPNLEYVY 77
 
Name Accession Description Interval E-value
DUF3139 pfam11337
Protein of unknown function (DUF3139); This family of proteins with unknown function appears ...
 5-81 2.32e-23

Protein of unknown function (DUF3139); This family of proteins with unknown function appears to be restricted to Firmicutes.


Pssm-ID: 431823  Cd Length: 77  Bit Score: 85.86  E-value: 2.32e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499298536    5 KKWWITIGIVLILCVIGYVYWFVIPKHTANKAVDNYLAEQKIKSSQIETRVIKKDWKMGGYLTKIVFKDDSDLKYEY 81
Cdd:pfam11337   1 KKIKIILIILIILIVIGWVGHKPIQKYLGNKKLDKYLTEQGYKEDDIKSIKPKYDIKKGGYYYKVVFKDEPNLEYVY 77
 
Name Accession Description Interval E-value
DUF3139 pfam11337
Protein of unknown function (DUF3139); This family of proteins with unknown function appears ...
 5-81 2.32e-23

Protein of unknown function (DUF3139); This family of proteins with unknown function appears to be restricted to Firmicutes.


Pssm-ID: 431823  Cd Length: 77  Bit Score: 85.86  E-value: 2.32e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499298536    5 KKWWITIGIVLILCVIGYVYWFVIPKHTANKAVDNYLAEQKIKSSQIETRVIKKDWKMGGYLTKIVFKDDSDLKYEY 81
Cdd:pfam11337   1 KKIKIILIILIILIVIGWVGHKPIQKYLGNKKLDKYLTEQGYKEDDIKSIKPKYDIKKGGYYYKVVFKDEPNLEYVY 77
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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