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Conserved domains on  [gi|498965276|ref|XP_004525558|]
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uncharacterized protein LOC101456033 [Ceratitis capitata]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SAP pfam02037
SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding ...
 1018-1052 2.35e-09

SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain found in diverse nuclear and cytoplasmic proteins.


:

Pssm-ID: 460424 [Multi-domain]  Cd Length: 35  Bit Score: 54.33  E-value: 2.35e-09
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 498965276  1018 LEKMKVSDLKMHLKRRNLPVSGPKPQLIERLKPYL 1052
Cdd:pfam02037    1 LSKLTVAELKEELRKRGLPTSGKKAELIERLQEYL 35
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
552-577 6.37e-07

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


:

Pssm-ID: 128947  Cd Length: 26  Bit Score: 47.47  E-value: 6.37e-07
                            10        20
                    ....*....|....*....|....*.
gi 498965276    552 DMLKAKIQQRPNREDLERRHILEEDE 577
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILKELS 26
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
598-623 3.46e-06

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


:

Pssm-ID: 128947  Cd Length: 26  Bit Score: 45.16  E-value: 3.46e-06
                            10        20
                    ....*....|....*....|....*.
gi 498965276    598 DQLNSQIQHRPGPLELIKKNILHTEK 623
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILKELS 26
PRK13808 super family cl31642
adenylate kinase; Provisional
 277-381 3.27e-03

adenylate kinase; Provisional


The actual alignment was detected with superfamily member PRK13808:

Pssm-ID: 172341 [Multi-domain]  Cd Length: 333  Bit Score: 42.18  E-value: 3.27e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498965276  277 SKTSAAGAPKATTAKSANTANGVNHKSANGSASESASETSKKCAATKAAVKSAVKSIVKAREKSAAAVSTLSATPAKDTS 356
Cdd:PRK13808  211 GAKKASAKAKSAAKKVSKKKAAKTAVSAKKAAKTAAKAAKKAKKTAKKALKKAAKAVKKAAKKAAKAAAKAAKGAAKATK 290

                          90       100
                  ....*....|....*....|....*
gi 498965276  357 VPALTPVTASTGSAAVVSKAITKSA 381
Cdd:PRK13808  291 GKAKAKKKAGKKAAAGSKAKATAKA 315
 
Name Accession Description Interval E-value
SAP pfam02037
SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding ...
 1018-1052 2.35e-09

SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain found in diverse nuclear and cytoplasmic proteins.


Pssm-ID: 460424 [Multi-domain]  Cd Length: 35  Bit Score: 54.33  E-value: 2.35e-09
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 498965276  1018 LEKMKVSDLKMHLKRRNLPVSGPKPQLIERLKPYL 1052
Cdd:pfam02037    1 LSKLTVAELKEELRKRGLPTSGKKAELIERLQEYL 35
SAP smart00513
Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation;
1018-1052 1.26e-07

Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation;


Pssm-ID: 128789 [Multi-domain]  Cd Length: 35  Bit Score: 49.41  E-value: 1.26e-07
                            10        20        30
                    ....*....|....*....|....*....|....*
gi 498965276   1018 LEKMKVSDLKMHLKRRNLPVSGPKPQLIERLKPYL 1052
Cdd:smart00513    1 LAKLKVSELKDELKKRGLSTSGTKAELVDRLLEAL 35
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
552-577 6.37e-07

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


Pssm-ID: 128947  Cd Length: 26  Bit Score: 47.47  E-value: 6.37e-07
                            10        20
                    ....*....|....*....|....*.
gi 498965276    552 DMLKAKIQQRPNREDLERRHILEEDE 577
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILKELS 26
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
598-623 3.46e-06

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


Pssm-ID: 128947  Cd Length: 26  Bit Score: 45.16  E-value: 3.46e-06
                            10        20
                    ....*....|....*....|....*.
gi 498965276    598 DQLNSQIQHRPGPLELIKKNILHTEK 623
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILKELS 26
RPEL pfam02755
RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL ...
 554-576 3.64e-06

RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL motif binds to actin.


Pssm-ID: 460677  Cd Length: 24  Bit Score: 44.96  E-value: 3.64e-06
                           10        20
                   ....*....|....*....|...
gi 498965276   554 LKAKIQQRPNREDLERRHILEED 576
Cdd:pfam02755    2 LERKLSHRPTREELVERNILPED 24
RPEL pfam02755
RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL ...
 600-622 1.26e-04

RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL motif binds to actin.


Pssm-ID: 460677  Cd Length: 24  Bit Score: 40.72  E-value: 1.26e-04
                           10        20
                   ....*....|....*....|...
gi 498965276   600 LNSQIQHRPGPLELIKKNILHTE 622
Cdd:pfam02755    2 LERKLSHRPTREELVERNILPED 24
PRK13808 PRK13808
adenylate kinase; Provisional
 277-381 3.27e-03

adenylate kinase; Provisional


Pssm-ID: 172341 [Multi-domain]  Cd Length: 333  Bit Score: 42.18  E-value: 3.27e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498965276  277 SKTSAAGAPKATTAKSANTANGVNHKSANGSASESASETSKKCAATKAAVKSAVKSIVKAREKSAAAVSTLSATPAKDTS 356
Cdd:PRK13808  211 GAKKASAKAKSAAKKVSKKKAAKTAVSAKKAAKTAAKAAKKAKKTAKKALKKAAKAVKKAAKKAAKAAAKAAKGAAKATK 290

                          90       100
                  ....*....|....*....|....*
gi 498965276  357 VPALTPVTASTGSAAVVSKAITKSA 381
Cdd:PRK13808  291 GKAKAKKKAGKKAAAGSKAKATAKA 315
 
Name Accession Description Interval E-value
SAP pfam02037
SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding ...
 1018-1052 2.35e-09

SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain found in diverse nuclear and cytoplasmic proteins.


Pssm-ID: 460424 [Multi-domain]  Cd Length: 35  Bit Score: 54.33  E-value: 2.35e-09
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 498965276  1018 LEKMKVSDLKMHLKRRNLPVSGPKPQLIERLKPYL 1052
Cdd:pfam02037    1 LSKLTVAELKEELRKRGLPTSGKKAELIERLQEYL 35
SAP smart00513
Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation;
1018-1052 1.26e-07

Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation;


Pssm-ID: 128789 [Multi-domain]  Cd Length: 35  Bit Score: 49.41  E-value: 1.26e-07
                            10        20        30
                    ....*....|....*....|....*....|....*
gi 498965276   1018 LEKMKVSDLKMHLKRRNLPVSGPKPQLIERLKPYL 1052
Cdd:smart00513    1 LAKLKVSELKDELKKRGLSTSGTKAELVDRLLEAL 35
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
552-577 6.37e-07

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


Pssm-ID: 128947  Cd Length: 26  Bit Score: 47.47  E-value: 6.37e-07
                            10        20
                    ....*....|....*....|....*.
gi 498965276    552 DMLKAKIQQRPNREDLERRHILEEDE 577
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILKELS 26
RPEL smart00707
Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;
598-623 3.46e-06

Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2;


Pssm-ID: 128947  Cd Length: 26  Bit Score: 45.16  E-value: 3.46e-06
                            10        20
                    ....*....|....*....|....*.
gi 498965276    598 DQLNSQIQHRPGPLELIKKNILHTEK 623
Cdd:smart00707    1 DVLNRKLSQRPTREELEERNILKELS 26
RPEL pfam02755
RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL ...
 554-576 3.64e-06

RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL motif binds to actin.


Pssm-ID: 460677  Cd Length: 24  Bit Score: 44.96  E-value: 3.64e-06
                           10        20
                   ....*....|....*....|...
gi 498965276   554 LKAKIQQRPNREDLERRHILEED 576
Cdd:pfam02755    2 LERKLSHRPTREELVERNILPED 24
RPEL pfam02755
RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL ...
 600-622 1.26e-04

RPEL repeat; The RPEL repeat is named after four conserved amino acids it contains. The RPEL motif binds to actin.


Pssm-ID: 460677  Cd Length: 24  Bit Score: 40.72  E-value: 1.26e-04
                           10        20
                   ....*....|....*....|...
gi 498965276   600 LNSQIQHRPGPLELIKKNILHTE 622
Cdd:pfam02755    2 LERKLSHRPTREELVERNILPED 24
PRK13808 PRK13808
adenylate kinase; Provisional
 277-381 3.27e-03

adenylate kinase; Provisional


Pssm-ID: 172341 [Multi-domain]  Cd Length: 333  Bit Score: 42.18  E-value: 3.27e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498965276  277 SKTSAAGAPKATTAKSANTANGVNHKSANGSASESASETSKKCAATKAAVKSAVKSIVKAREKSAAAVSTLSATPAKDTS 356
Cdd:PRK13808  211 GAKKASAKAKSAAKKVSKKKAAKTAVSAKKAAKTAAKAAKKAKKTAKKALKKAAKAVKKAAKKAAKAAAKAAKGAAKATK 290

                          90       100
                  ....*....|....*....|....*
gi 498965276  357 VPALTPVTASTGSAAVVSKAITKSA 381
Cdd:PRK13808  291 GKAKAKKKAGKKAAAGSKAKATAKA 315
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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