|
Name |
Accession |
Description |
Interval |
E-value |
| LacZ |
COG3250 |
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]; |
34-617 |
7.32e-102 |
|
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
:
Pssm-ID: 442481 [Multi-domain] Cd Length: 638 Bit Score: 332.50 E-value: 7.32e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 34 WRLQIGDFPEAKQSQFDDSRWKAVTLPHAFNEDEAFK----VSIEQLTDTVVWYRKHFRIPASGKKQKVFIEFEGVRQAG 109
Cdd:COG3250 3 WKFRLGDAPEGAKPDFDDSGWDPITVPGDWELDLYGLpdpfVGPWYLYNGVGWYRRTFTVPASWKGKRVFLHFEGVDTAA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 110 DFYLNGQYLGKHENGVMAVGFDLTPYIKEGDNVLAVRTDNDWMYrekstNSKFQWNdrnfNANYGGLPKNVFLYVTDEVY 189
Cdd:COG3250 83 EVWVNGKKVGYHEGGFTPFEFDITDYLKPGENVLAVRVDNPSDG-----SYLEGQD----WWRTSGIYRDVWLEATPKVH 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 190 QTLplysnlkttgVYIYAkdiDVKGRTATIHAESEVKNDSREPRQLSYQviLLDADGKQVKSFEGeKVTLQGGETKIVKA 269
Cdd:COG3250 154 IED----------VFVTP---DLDDGSATLTVEVELENESDAGVTVEVT--LLDADGKVVATATA-KVTLAAGEENTVTL 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 270 ASKVDNLHFWSWGYGYLYTVQTILKDNkNQVFDEVSTRTGFRKTQF-AEGKIWLNDRVIQMKGYAQRTSneWPAVGLSVP 348
Cdd:COG3250 218 TLTVPNPKLWSPEDPNLYTLVVTLKDD-GKVVDTVSTRFGFRTIEIdGDGGFLLNGKPVFLKGVNRHED--WPDDGRAVT 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 349 AWLSDYSNGLVVKGNGNLVRWMHVTPWKQDVESCDRVGLIQAMPAGDSEKDRTGRQWD---QRTELMRDAIIYNRNNPSI 425
Cdd:COG3250 295 DEAMRRDLELMKEAGFNAVRTSHYPEDPEFYDLCDELGLLVWDEAPFEWHGMLGDDPEfleAVEAELREMVRRDRNHPSI 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 426 LFYECGNKGISKEHMIEMKAIRDKYDPfgGRA--IGSremldireaEYGGEMLYINKSVHH-PMWATEYCRDEGLRKYWD 502
Cdd:COG3250 375 ILWSGGNESGGGPNFAALYEWVKELDP--TRPvrFLS---------EYGHAMPNSLGGGYHqPSDFEEYQALQALEEYWE 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 503 EysypfhkegdgplhrnqpatdynhnqdmlaiamirtwydyWRERPGTgrrvsSGGAKIIFSDTNTHHRG-EENYRRSGV 581
Cdd:COG3250 444 A----------------------------------------FRRRPRL-----AGGFIWQLNDYWPEPRDnDGNFCSWGL 478
|
570 580 590
....*....|....*....|....*....|....*..
gi 498222622 582 TDPM-RIEKDAFFAHQVMWNGWVDTEEDNTYIIGHWN 617
Cdd:COG3250 479 VDYYdRTPKPAYYEVKSAWQPVLVSDGMLHILLPHWN 515
|
|
| Glyco_hydro2_C5 |
pfam18565 |
Glycoside hydrolase family 2 C-terminal domain 5; Domain 5 is found in dimeric ... |
693-795 |
7.59e-22 |
|
Glycoside hydrolase family 2 C-terminal domain 5; Domain 5 is found in dimeric beta-D-galactosidase from Paracoccus sp. 32d, which contributes to stabilization of the functional dimer. It is suggested that the location of this domain 5, may be one of the factors responsible for the creation of a functional dimer and cold-adaptation of this enzyme.
:
Pssm-ID: 436582 Cd Length: 103 Bit Score: 90.98 E-value: 7.59e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 693 LKLTTiqNPEGFHADGADLALIQVEVVDKDGKRCPLDNRIIQFDLKGNAEWRGGiaqgkDNYIlNTSLPVECGINR---- 768
Cdd:pfam18565 1 LRLTA--DRTTLKADGKDLAFVTVEVVDKNGNLVPNADNLVTFSVEGPGELVGV-----DNGD-PTSLESFQSNERkafn 72
|
90 100 110
....*....|....*....|....*....|.
gi 498222622 769 ----ALIRSTTQAGKITLTAKAEGLPSATIT 795
Cdd:pfam18565 73 gkalAIVRSTGEAGTITLTASAEGLKSATVT 103
|
|
| DUF4982 |
pfam16355 |
Domain of unknown function (DUF4982); This family is found in the C-terminal of ... |
622-681 |
2.66e-13 |
|
Domain of unknown function (DUF4982); This family is found in the C-terminal of uncharacterized proteins and beta-galactosidases around 680 residues in length from various Bacteroides species. The function of this protein is unknown.
:
Pssm-ID: 465102 Cd Length: 62 Bit Score: 65.19 E-value: 2.66e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 498222622 622 TVKPVYVVSTGEGVELFLNGQSLGKGK--REYNFLFTFDnVAFKAGKLEAVSYnKAGKEISR 681
Cdd:pfam16355 2 QPIPVEVYSNADEVELFLNGKSLGRKKkkDGRDYRLRWD-VPYEPGELKAVAY-KNGKEVAE 61
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| LacZ |
COG3250 |
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]; |
34-617 |
7.32e-102 |
|
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
Pssm-ID: 442481 [Multi-domain] Cd Length: 638 Bit Score: 332.50 E-value: 7.32e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 34 WRLQIGDFPEAKQSQFDDSRWKAVTLPHAFNEDEAFK----VSIEQLTDTVVWYRKHFRIPASGKKQKVFIEFEGVRQAG 109
Cdd:COG3250 3 WKFRLGDAPEGAKPDFDDSGWDPITVPGDWELDLYGLpdpfVGPWYLYNGVGWYRRTFTVPASWKGKRVFLHFEGVDTAA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 110 DFYLNGQYLGKHENGVMAVGFDLTPYIKEGDNVLAVRTDNDWMYrekstNSKFQWNdrnfNANYGGLPKNVFLYVTDEVY 189
Cdd:COG3250 83 EVWVNGKKVGYHEGGFTPFEFDITDYLKPGENVLAVRVDNPSDG-----SYLEGQD----WWRTSGIYRDVWLEATPKVH 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 190 QTLplysnlkttgVYIYAkdiDVKGRTATIHAESEVKNDSREPRQLSYQviLLDADGKQVKSFEGeKVTLQGGETKIVKA 269
Cdd:COG3250 154 IED----------VFVTP---DLDDGSATLTVEVELENESDAGVTVEVT--LLDADGKVVATATA-KVTLAAGEENTVTL 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 270 ASKVDNLHFWSWGYGYLYTVQTILKDNkNQVFDEVSTRTGFRKTQF-AEGKIWLNDRVIQMKGYAQRTSneWPAVGLSVP 348
Cdd:COG3250 218 TLTVPNPKLWSPEDPNLYTLVVTLKDD-GKVVDTVSTRFGFRTIEIdGDGGFLLNGKPVFLKGVNRHED--WPDDGRAVT 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 349 AWLSDYSNGLVVKGNGNLVRWMHVTPWKQDVESCDRVGLIQAMPAGDSEKDRTGRQWD---QRTELMRDAIIYNRNNPSI 425
Cdd:COG3250 295 DEAMRRDLELMKEAGFNAVRTSHYPEDPEFYDLCDELGLLVWDEAPFEWHGMLGDDPEfleAVEAELREMVRRDRNHPSI 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 426 LFYECGNKGISKEHMIEMKAIRDKYDPfgGRA--IGSremldireaEYGGEMLYINKSVHH-PMWATEYCRDEGLRKYWD 502
Cdd:COG3250 375 ILWSGGNESGGGPNFAALYEWVKELDP--TRPvrFLS---------EYGHAMPNSLGGGYHqPSDFEEYQALQALEEYWE 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 503 EysypfhkegdgplhrnqpatdynhnqdmlaiamirtwydyWRERPGTgrrvsSGGAKIIFSDTNTHHRG-EENYRRSGV 581
Cdd:COG3250 444 A----------------------------------------FRRRPRL-----AGGFIWQLNDYWPEPRDnDGNFCSWGL 478
|
570 580 590
....*....|....*....|....*....|....*..
gi 498222622 582 TDPM-RIEKDAFFAHQVMWNGWVDTEEDNTYIIGHWN 617
Cdd:COG3250 479 VDYYdRTPKPAYYEVKSAWQPVLVSDGMLHILLPHWN 515
|
|
| Glyco_hydro2_C5 |
pfam18565 |
Glycoside hydrolase family 2 C-terminal domain 5; Domain 5 is found in dimeric ... |
693-795 |
7.59e-22 |
|
Glycoside hydrolase family 2 C-terminal domain 5; Domain 5 is found in dimeric beta-D-galactosidase from Paracoccus sp. 32d, which contributes to stabilization of the functional dimer. It is suggested that the location of this domain 5, may be one of the factors responsible for the creation of a functional dimer and cold-adaptation of this enzyme.
Pssm-ID: 436582 Cd Length: 103 Bit Score: 90.98 E-value: 7.59e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 693 LKLTTiqNPEGFHADGADLALIQVEVVDKDGKRCPLDNRIIQFDLKGNAEWRGGiaqgkDNYIlNTSLPVECGINR---- 768
Cdd:pfam18565 1 LRLTA--DRTTLKADGKDLAFVTVEVVDKNGNLVPNADNLVTFSVEGPGELVGV-----DNGD-PTSLESFQSNERkafn 72
|
90 100 110
....*....|....*....|....*....|.
gi 498222622 769 ----ALIRSTTQAGKITLTAKAEGLPSATIT 795
Cdd:pfam18565 73 gkalAIVRSTGEAGTITLTASAEGLKSATVT 103
|
|
| ebgA |
PRK10340 |
cryptic beta-D-galactosidase subunit alpha; Reviewed |
83-452 |
4.78e-21 |
|
cryptic beta-D-galactosidase subunit alpha; Reviewed
Pssm-ID: 236673 [Multi-domain] Cd Length: 1021 Bit Score: 99.75 E-value: 4.78e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 83 YRKHFRIPASGKKQKVFIEFEGVRQAGDFYLNGQYLGKHENGVMAVGFDLTPYIKEGDNVLAVRTdndwmyrekstnskF 162
Cdd:PRK10340 113 YQRTFTLSDGWQGKQTIIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFDISAMVKTGDNLLCVRV--------------M 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 163 QWNDRNFNAN-----YGGLPKNVFLYVTDEvyqtlplysnlktTGVYIYA--KDIDVKGRTATIHAESEVKNDSREPRQL 235
Cdd:PRK10340 179 QWADSTYLEDqdmwwLAGIFRDVYLVGKPL-------------THINDFTvrTDFDEDYCDATLSCEVVLENLAASPVVT 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 236 SYQVILLDaDGKQVKSFEGEKVTLQGGETkiVKAASKVDNLHFWSWGYGYLYTVQTILKDNKNQVFDEVSTRTGFRKTQF 315
Cdd:PRK10340 246 TLEYTLFD-GERVVHSSAIDHLAIEKLTS--ASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDIKV 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 316 AEGKIWLNDRVIQMKGyAQRTSNEwPAVGLSVPAWLSDYSNGLVVKGNGNLVRWMHVTPWKQDVESCDRVGLIqAMPAGD 395
Cdd:PRK10340 323 RDGLFWINNRYVKLHG-VNRHDND-HRKGRAVGMDRVEKDIQLMKQHNINSVRTAHYPNDPRFYELCDIYGLF-VMAETD 399
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 498222622 396 SEK---DRTGR--------QWDQR-TELMRDAIIYNRNNPSILFYECGNKGISKEHMIEMKAIRDKYDP 452
Cdd:PRK10340 400 VEShgfANVGDisritddpQWEKVyVDRIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDD 468
|
|
| Glyco_hydro_2_N |
pfam02837 |
Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, ... |
31-185 |
9.61e-19 |
|
Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
Pssm-ID: 397120 [Multi-domain] Cd Length: 169 Bit Score: 84.60 E-value: 9.61e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 31 NSEWRLQIGDFPEAKQSQFDDS---RWKAVTLPHAFNeDEAFKVSIEQLTDT----------VVWYRKHFRIPASGKKQK 97
Cdd:pfam02837 5 NGEWAFALFDAPCGAPQSWWESalqESRTIAVPSSWN-DQPIYTNVEYPIDFadpfiptyngTGWYQRTFFIPSKWAGQR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 98 VFIEFEGVRQAGDFYLNGQYLGKHENGVMAVGFDLTPYIKEGDNVLAVRTDNdWMYREKSTNSKFQWNDRNFnaNYGGLP 177
Cdd:pfam02837 84 IRLRFDGVTHYGEVWVNGQWVGEHQGGYTPFEFDLTPYVIAGKNRIAVKVLN-WSDG*YIEDQNGKYFHDFW--NYSGIY 160
|
....*...
gi 498222622 178 KNVFLYVT 185
Cdd:pfam02837 161 RDVSLLTT 168
|
|
| DUF4982 |
pfam16355 |
Domain of unknown function (DUF4982); This family is found in the C-terminal of ... |
622-681 |
2.66e-13 |
|
Domain of unknown function (DUF4982); This family is found in the C-terminal of uncharacterized proteins and beta-galactosidases around 680 residues in length from various Bacteroides species. The function of this protein is unknown.
Pssm-ID: 465102 Cd Length: 62 Bit Score: 65.19 E-value: 2.66e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 498222622 622 TVKPVYVVSTGEGVELFLNGQSLGKGK--REYNFLFTFDnVAFKAGKLEAVSYnKAGKEISR 681
Cdd:pfam16355 2 QPIPVEVYSNADEVELFLNGKSLGRKKkkDGRDYRLRWD-VPYEPGELKAVAY-KNGKEVAE 61
|
|
| DUF1425 |
cd09030 |
Putative periplasmic lipoprotein; This bacterial family of proteins contains members described ... |
209-271 |
2.24e-03 |
|
Putative periplasmic lipoprotein; This bacterial family of proteins contains members described as putative lipoproteins, some are also known as YcfL. The function of this family is unknown. Family members have also been annotated as predicted periplasmic lipoproteins (COG5633), and appear to contain an N-terminal membrane lipoprotein lipid attachment side (pfam08139), which is not included in this alignment model.
Pssm-ID: 176923 Cd Length: 101 Bit Score: 38.44 E-value: 2.24e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 498222622 209 DIDVKGRTATIHAESEVKNDSREPRQLSYQVILLDADGKQVKSFEG--EKVTLQGGETKIVKAAS 271
Cdd:cd09030 24 EPRISRTNGLLEAQATLSNTSSKPLTLQYRFYWYDAQGLEVEPEQEpwQSLTLPGGQTVTLQAVA 88
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| LacZ |
COG3250 |
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]; |
34-617 |
7.32e-102 |
|
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
Pssm-ID: 442481 [Multi-domain] Cd Length: 638 Bit Score: 332.50 E-value: 7.32e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 34 WRLQIGDFPEAKQSQFDDSRWKAVTLPHAFNEDEAFK----VSIEQLTDTVVWYRKHFRIPASGKKQKVFIEFEGVRQAG 109
Cdd:COG3250 3 WKFRLGDAPEGAKPDFDDSGWDPITVPGDWELDLYGLpdpfVGPWYLYNGVGWYRRTFTVPASWKGKRVFLHFEGVDTAA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 110 DFYLNGQYLGKHENGVMAVGFDLTPYIKEGDNVLAVRTDNDWMYrekstNSKFQWNdrnfNANYGGLPKNVFLYVTDEVY 189
Cdd:COG3250 83 EVWVNGKKVGYHEGGFTPFEFDITDYLKPGENVLAVRVDNPSDG-----SYLEGQD----WWRTSGIYRDVWLEATPKVH 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 190 QTLplysnlkttgVYIYAkdiDVKGRTATIHAESEVKNDSREPRQLSYQviLLDADGKQVKSFEGeKVTLQGGETKIVKA 269
Cdd:COG3250 154 IED----------VFVTP---DLDDGSATLTVEVELENESDAGVTVEVT--LLDADGKVVATATA-KVTLAAGEENTVTL 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 270 ASKVDNLHFWSWGYGYLYTVQTILKDNkNQVFDEVSTRTGFRKTQF-AEGKIWLNDRVIQMKGYAQRTSneWPAVGLSVP 348
Cdd:COG3250 218 TLTVPNPKLWSPEDPNLYTLVVTLKDD-GKVVDTVSTRFGFRTIEIdGDGGFLLNGKPVFLKGVNRHED--WPDDGRAVT 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 349 AWLSDYSNGLVVKGNGNLVRWMHVTPWKQDVESCDRVGLIQAMPAGDSEKDRTGRQWD---QRTELMRDAIIYNRNNPSI 425
Cdd:COG3250 295 DEAMRRDLELMKEAGFNAVRTSHYPEDPEFYDLCDELGLLVWDEAPFEWHGMLGDDPEfleAVEAELREMVRRDRNHPSI 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 426 LFYECGNKGISKEHMIEMKAIRDKYDPfgGRA--IGSremldireaEYGGEMLYINKSVHH-PMWATEYCRDEGLRKYWD 502
Cdd:COG3250 375 ILWSGGNESGGGPNFAALYEWVKELDP--TRPvrFLS---------EYGHAMPNSLGGGYHqPSDFEEYQALQALEEYWE 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 503 EysypfhkegdgplhrnqpatdynhnqdmlaiamirtwydyWRERPGTgrrvsSGGAKIIFSDTNTHHRG-EENYRRSGV 581
Cdd:COG3250 444 A----------------------------------------FRRRPRL-----AGGFIWQLNDYWPEPRDnDGNFCSWGL 478
|
570 580 590
....*....|....*....|....*....|....*..
gi 498222622 582 TDPM-RIEKDAFFAHQVMWNGWVDTEEDNTYIIGHWN 617
Cdd:COG3250 479 VDYYdRTPKPAYYEVKSAWQPVLVSDGMLHILLPHWN 515
|
|
| Glyco_hydro2_C5 |
pfam18565 |
Glycoside hydrolase family 2 C-terminal domain 5; Domain 5 is found in dimeric ... |
693-795 |
7.59e-22 |
|
Glycoside hydrolase family 2 C-terminal domain 5; Domain 5 is found in dimeric beta-D-galactosidase from Paracoccus sp. 32d, which contributes to stabilization of the functional dimer. It is suggested that the location of this domain 5, may be one of the factors responsible for the creation of a functional dimer and cold-adaptation of this enzyme.
Pssm-ID: 436582 Cd Length: 103 Bit Score: 90.98 E-value: 7.59e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 693 LKLTTiqNPEGFHADGADLALIQVEVVDKDGKRCPLDNRIIQFDLKGNAEWRGGiaqgkDNYIlNTSLPVECGINR---- 768
Cdd:pfam18565 1 LRLTA--DRTTLKADGKDLAFVTVEVVDKNGNLVPNADNLVTFSVEGPGELVGV-----DNGD-PTSLESFQSNERkafn 72
|
90 100 110
....*....|....*....|....*....|.
gi 498222622 769 ----ALIRSTTQAGKITLTAKAEGLPSATIT 795
Cdd:pfam18565 73 gkalAIVRSTGEAGTITLTASAEGLKSATVT 103
|
|
| ebgA |
PRK10340 |
cryptic beta-D-galactosidase subunit alpha; Reviewed |
83-452 |
4.78e-21 |
|
cryptic beta-D-galactosidase subunit alpha; Reviewed
Pssm-ID: 236673 [Multi-domain] Cd Length: 1021 Bit Score: 99.75 E-value: 4.78e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 83 YRKHFRIPASGKKQKVFIEFEGVRQAGDFYLNGQYLGKHENGVMAVGFDLTPYIKEGDNVLAVRTdndwmyrekstnskF 162
Cdd:PRK10340 113 YQRTFTLSDGWQGKQTIIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFDISAMVKTGDNLLCVRV--------------M 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 163 QWNDRNFNAN-----YGGLPKNVFLYVTDEvyqtlplysnlktTGVYIYA--KDIDVKGRTATIHAESEVKNDSREPRQL 235
Cdd:PRK10340 179 QWADSTYLEDqdmwwLAGIFRDVYLVGKPL-------------THINDFTvrTDFDEDYCDATLSCEVVLENLAASPVVT 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 236 SYQVILLDaDGKQVKSFEGEKVTLQGGETkiVKAASKVDNLHFWSWGYGYLYTVQTILKDNKNQVFDEVSTRTGFRKTQF 315
Cdd:PRK10340 246 TLEYTLFD-GERVVHSSAIDHLAIEKLTS--ASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDIKV 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 316 AEGKIWLNDRVIQMKGyAQRTSNEwPAVGLSVPAWLSDYSNGLVVKGNGNLVRWMHVTPWKQDVESCDRVGLIqAMPAGD 395
Cdd:PRK10340 323 RDGLFWINNRYVKLHG-VNRHDND-HRKGRAVGMDRVEKDIQLMKQHNINSVRTAHYPNDPRFYELCDIYGLF-VMAETD 399
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 498222622 396 SEK---DRTGR--------QWDQR-TELMRDAIIYNRNNPSILFYECGNKGISKEHMIEMKAIRDKYDP 452
Cdd:PRK10340 400 VEShgfANVGDisritddpQWEKVyVDRIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDD 468
|
|
| PRK10150 |
PRK10150 |
beta-D-glucuronidase; Provisional |
25-332 |
1.39e-19 |
|
beta-D-glucuronidase; Provisional
Pssm-ID: 236657 [Multi-domain] Cd Length: 604 Bit Score: 93.92 E-value: 1.39e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 25 RKKYNFNSEWRLQIGDFPEAKQSQFDDSRWKAVTL---PHAFNEdeafKVSIEQLTDTV--VWYRKHFRIPASGKKQKVF 99
Cdd:PRK10150 10 REIKDLSGLWAFKLDRENCGIDQRWWESALPESRAmavPGSFND----QFADADIRNYVgdVWYQREVFIPKGWAGQRIV 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 100 IEFEGVRQAGDFYLNGQYLGKHENGVMAVGFDLTPYIKEGDNV-LAVRTDN--DW------MYREKSTNSKFQwnDRNFN 170
Cdd:PRK10150 86 LRFGSVTHYAKVWVNGQEVMEHKGGYTPFEADITPYVYAGKSVrITVCVNNelNWqtlppgNVIEDGNGKKKQ--KYNFD 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 171 -ANYGGLPKNVFLYVTDEVYqtlplYSNLKTTgvyiyaKDIDVKGRTATIHAESEVKNDsreprQLSYQVILLDADGKQV 249
Cdd:PRK10150 164 fFNYAGIHRPVMLYTTPKTH-----IDDITVV------TELAQDLNHASVDWSVETNGD-----VDSVSVTLRDADGQVV 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 250 KSFEGEKVTLQggetkivkaaskVDNLHFWSWGYGYLYTVQTILKDNKnQVFDEVSTRTGFRKTQFAEGKIWLNDRVIQM 329
Cdd:PRK10150 228 ATGQGTSGTLQ------------VVNPHLWQPGEGYLYTLCVELAKSG-TECDTYPLRFGIRSVAVKGGQFLINGKPFYF 294
|
...
gi 498222622 330 KGY 332
Cdd:PRK10150 295 KGF 297
|
|
| Glyco_hydro_2_N |
pfam02837 |
Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, ... |
31-185 |
9.61e-19 |
|
Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
Pssm-ID: 397120 [Multi-domain] Cd Length: 169 Bit Score: 84.60 E-value: 9.61e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 31 NSEWRLQIGDFPEAKQSQFDDS---RWKAVTLPHAFNeDEAFKVSIEQLTDT----------VVWYRKHFRIPASGKKQK 97
Cdd:pfam02837 5 NGEWAFALFDAPCGAPQSWWESalqESRTIAVPSSWN-DQPIYTNVEYPIDFadpfiptyngTGWYQRTFFIPSKWAGQR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 98 VFIEFEGVRQAGDFYLNGQYLGKHENGVMAVGFDLTPYIKEGDNVLAVRTDNdWMYREKSTNSKFQWNDRNFnaNYGGLP 177
Cdd:pfam02837 84 IRLRFDGVTHYGEVWVNGQWVGEHQGGYTPFEFDLTPYVIAGKNRIAVKVLN-WSDG*YIEDQNGKYFHDFW--NYSGIY 160
|
....*...
gi 498222622 178 KNVFLYVT 185
Cdd:pfam02837 161 RDVSLLTT 168
|
|
| Glyco_hydro_2 |
pfam00703 |
Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and ... |
203-311 |
1.32e-13 |
|
Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
Pssm-ID: 395572 [Multi-domain] Cd Length: 106 Bit Score: 67.89 E-value: 1.32e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 203 VYIYAKDIDVKgrTATIHAESEVKNDSREPRQLSYQVILLDADGKQVKSFEGEKVTLQGGETKIvkaasKVDNLHFWSWG 282
Cdd:pfam00703 6 VFITPDLDDDK--TAKVTVEVELENDGDASVEVTLETEIKDADGKTVAAAAKVLVLGAGETTEL-----EVKNPKLWSPE 78
|
90 100
....*....|....*....|....*....
gi 498222622 283 YGYLYTVQTILKDNkNQVFDEVSTRTGFR 311
Cdd:pfam00703 79 TPNLYTLTVELDKD-GKVIDEVSTRFGFR 106
|
|
| DUF4982 |
pfam16355 |
Domain of unknown function (DUF4982); This family is found in the C-terminal of ... |
622-681 |
2.66e-13 |
|
Domain of unknown function (DUF4982); This family is found in the C-terminal of uncharacterized proteins and beta-galactosidases around 680 residues in length from various Bacteroides species. The function of this protein is unknown.
Pssm-ID: 465102 Cd Length: 62 Bit Score: 65.19 E-value: 2.66e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 498222622 622 TVKPVYVVSTGEGVELFLNGQSLGKGK--REYNFLFTFDnVAFKAGKLEAVSYnKAGKEISR 681
Cdd:pfam16355 2 QPIPVEVYSNADEVELFLNGKSLGRKKkkDGRDYRLRWD-VPYEPGELKAVAY-KNGKEVAE 61
|
|
| lacZ |
PRK09525 |
beta-galactosidase; |
83-323 |
1.13e-06 |
|
beta-galactosidase;
Pssm-ID: 236548 [Multi-domain] Cd Length: 1027 Bit Score: 52.63 E-value: 1.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 83 YRKHFRIP----ASGKKQkvfIEFEGVRQAgdFYL--NGQYLGKHENGVMAVGFDLTPYIKEGDNVLAVRT--------- 147
Cdd:PRK09525 124 YSLTFTVDeswlQSGQTR---IIFDGVNSA--FHLwcNGRWVGYSQDSRLPAEFDLSPFLRAGENRLAVMVlrwsdgsyl 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 148 -DND--WM---YREKSTNSKfqwndrnfnanygglPKNvflYVTDevYQTLPlysnlkttgvyiyakDIDVKGRTATIHA 221
Cdd:PRK09525 199 eDQDmwRMsgiFRDVSLLHK---------------PTT---QLSD--FHITT---------------ELDDDFRRAVLEV 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 498222622 222 ESEVKndSREPRQLSYQVILLDAD---GKQVKSFEGEKVTLQGGETKIVKAASKVDNLHFWSWGYGYLYTVQTILKDNKN 298
Cdd:PRK09525 244 EAQVN--GELRDELRVTVQLWDGEtlvASGTAPFGTEIIDERGAYADRVTLRLNVENPKLWSAETPNLYRAVVSLLDADG 321
|
250 260
....*....|....*....|....*
gi 498222622 299 QVFDEVSTRTGFRKTQFAEGKIWLN 323
Cdd:PRK09525 322 TLIEAEAYDVGFRKVEIENGLLKLN 346
|
|
| BetaGal_dom4_5 |
pfam13364 |
Beta-galactosidase jelly roll domain; This domain is found in beta galactosidase enzymes. It ... |
80-149 |
4.41e-04 |
|
Beta-galactosidase jelly roll domain; This domain is found in beta galactosidase enzymes. It has a jelly roll fold.
Pssm-ID: 463857 [Multi-domain] Cd Length: 111 Bit Score: 40.69 E-value: 4.41e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 498222622 80 VVWYRKHFRIPASGKKQKVFIEFEGVRQAG-DFYLNGQYLGKHENGV-MAVGFDLTPYIK--EGDNVLAVRTDN 149
Cdd:pfam13364 34 VRFYRGTFLDIPDGYDVSLSLTFQGGTAFRvQLWLNGYQLGSYVPHIgPQTTFPVPPGILnyRGDNTLAVLVWA 107
|
|
| DUF1425 |
cd09030 |
Putative periplasmic lipoprotein; This bacterial family of proteins contains members described ... |
209-271 |
2.24e-03 |
|
Putative periplasmic lipoprotein; This bacterial family of proteins contains members described as putative lipoproteins, some are also known as YcfL. The function of this family is unknown. Family members have also been annotated as predicted periplasmic lipoproteins (COG5633), and appear to contain an N-terminal membrane lipoprotein lipid attachment side (pfam08139), which is not included in this alignment model.
Pssm-ID: 176923 Cd Length: 101 Bit Score: 38.44 E-value: 2.24e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 498222622 209 DIDVKGRTATIHAESEVKNDSREPRQLSYQVILLDADGKQVKSFEG--EKVTLQGGETKIVKAAS 271
Cdd:cd09030 24 EPRISRTNGLLEAQATLSNTSSKPLTLQYRFYWYDAQGLEVEPEQEpwQSLTLPGGQTVTLQAVA 88
|
|
| YcfL |
COG5633 |
Uncharacterized conserved protein YcfL [Function unknown]; |
220-271 |
4.56e-03 |
|
Uncharacterized conserved protein YcfL [Function unknown];
Pssm-ID: 444360 Cd Length: 128 Bit Score: 38.43 E-value: 4.56e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 498222622 220 HAESEVKNDSREPRQLSYQVILLDADGKQVKSFEG--EKVTLQGGETKIVKAAS 271
Cdd:COG5633 59 RAQATLSNKSNKPVTLQYRFYWYDKNGLEIHPEESpwRTLTLPGNQTVTIQSVA 112
|
|
| |
