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Conserved domains on  [gi|497654179|ref|WP_009968363|]
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MULTISPECIES: GlsB/YeaQ/YmgE family stress response membrane protein [Bacillus]

Protein Classification

GlsB/YeaQ/YmgE family stress response membrane protein( domain architecture ID 10006287)

GlsB/YeaQ/YmgE family stress response membrane protein similar to Bacillus subtilis UPF0410 proteins YwzA and YdaS

Gene Ontology:  GO:0016020

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YeaQ COG2261
Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family ...
 1-81 1.72e-11

Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family [General function prediction only];


:

Pssm-ID: 441862  Cd Length: 85  Bit Score: 54.28  E-value: 1.72e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497654179  1 MSFLISLIVAIIIGWLGSLFVKGDMPGGIIGSMIAGLIGAWIGHGLLGTWGPHLAGF----AIIPAVIGAAIVVFLVSLL 76
Cdd:COG2261   1 MGIIGWIIIGLIAGWLARAIMPGGQGGGLIGTIVLGIVGAFVGGWLGGLLGIGLVGGfslgSLIVAVIGAIILLFIYRLI 80


                ....*
gi 497654179 77 TRKRG 81
Cdd:COG2261  81 RGRRR 85
 
Name Accession Description Interval E-value
YeaQ COG2261
Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family ...
 1-81 1.72e-11

Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family [General function prediction only];


Pssm-ID: 441862  Cd Length: 85  Bit Score: 54.28  E-value: 1.72e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497654179  1 MSFLISLIVAIIIGWLGSLFVKGDMPGGIIGSMIAGLIGAWIGHGLLGTWGPHLAGF----AIIPAVIGAAIVVFLVSLL 76
Cdd:COG2261   1 MGIIGWIIIGLIAGWLARAIMPGGQGGGLIGTIVLGIVGAFVGGWLGGLLGIGLVGGfslgSLIVAVIGAIILLFIYRLI 80


                ....*
gi 497654179 77 TRKRG 81
Cdd:COG2261  81 RGRRR 85
 
Name Accession Description Interval E-value
YeaQ COG2261
Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family ...
 1-81 1.72e-11

Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family [General function prediction only];


Pssm-ID: 441862  Cd Length: 85  Bit Score: 54.28  E-value: 1.72e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497654179  1 MSFLISLIVAIIIGWLGSLFVKGDMPGGIIGSMIAGLIGAWIGHGLLGTWGPHLAGF----AIIPAVIGAAIVVFLVSLL 76
Cdd:COG2261   1 MGIIGWIIIGLIAGWLARAIMPGGQGGGLIGTIVLGIVGAFVGGWLGGLLGIGLVGGfslgSLIVAVIGAIILLFIYRLI 80


                ....*
gi 497654179 77 TRKRG 81
Cdd:COG2261  81 RGRRR 85
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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