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Conserved domains on  [gi|497222645|ref|WP_009536907|]
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flagellar basal body rod protein FlgB [Oribacterium asaccharolyticum]

Protein Classification

flagellar basal body rod protein FlgB( domain architecture ID 11448558)

flagellar basal body rod protein FlgB forms, together with FlgC and FlgF, the proximal portion of the central rod at the core of the flagellar organelle's basal body

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FlgB COG1815
Flagellar basal body rod protein FlgB [Cell motility];
1-127 5.19e-30

Flagellar basal body rod protein FlgB [Cell motility];


:

Pssm-ID: 441420  Cd Length: 135  Bit Score: 104.99  E-value: 5.19e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645   1 MSLFYGNGIALTEKTLDLLWGRQNLTVNNIANVDTPNYKSKYLTFENELLHRISTAEKGGQKKVHVARAIDGQ-----RA 75
Cdd:COG1815    1 MSILFDKTFGLLEKALDLRSLRQEVIASNIANADTPGYKARDVDFEAALKAALGGGSAGLALATTNPRHIPGSagssvSP 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 497222645  76 RIHSTRNESSRLDGNNVDMDQEQVELVKTTYAYQYMVNSVNNDIKRLMAAVK 127
Cdd:COG1815   81 EVLYRTPTQPSLDGNTVDLDEEMAKLAENALQYQAALTFLNKKFSMLKTAIK 132
 
Name Accession Description Interval E-value
FlgB COG1815
Flagellar basal body rod protein FlgB [Cell motility];
1-127 5.19e-30

Flagellar basal body rod protein FlgB [Cell motility];


Pssm-ID: 441420  Cd Length: 135  Bit Score: 104.99  E-value: 5.19e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645   1 MSLFYGNGIALTEKTLDLLWGRQNLTVNNIANVDTPNYKSKYLTFENELLHRISTAEKGGQKKVHVARAIDGQ-----RA 75
Cdd:COG1815    1 MSILFDKTFGLLEKALDLRSLRQEVIASNIANADTPGYKARDVDFEAALKAALGGGSAGLALATTNPRHIPGSagssvSP 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 497222645  76 RIHSTRNESSRLDGNNVDMDQEQVELVKTTYAYQYMVNSVNNDIKRLMAAVK 127
Cdd:COG1815   81 EVLYRTPTQPSLDGNTVDLDEEMAKLAENALQYQAALTFLNKKFSMLKTAIK 132
FlgB TIGR01396
flagellar basal-body rod protein FlgB; This model represents FlgB, one of several components ...
 5-127 3.24e-23

flagellar basal-body rod protein FlgB; This model represents FlgB, one of several components of bacterial flagella that share a domain described by pfam00460. FlgB is part of the basal body. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 273598 [Multi-domain]  Cd Length: 131  Bit Score: 87.45  E-value: 3.24e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645    5 YGNGIALTEKTLDLLWGRQNLTVNNIANVDTPNYKSKYLTFENELLHRI-------STAEKGGQKKVHV-ARAIDGQRAR 76
Cdd:TIGR01396   1 FSNAFGLLQQALDVRSLRQEVIANNIANVDTPGYKAKDVSFEAELKKALdnernskLTLARTDTRPRHLnAQDSNSVEPS 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 497222645   77 IHSTRNESSRLDGNNVDMDQEQVELVKTTYAYQYMVNSVNNDIKRLMAAVK 127
Cdd:TIGR01396  81 LQYDYTTQVKNDGNNVDIDQEMAELAQNQMHYQALTQFLNGKIKGLNYVLR 131
flgB PRK12621
flagellar basal body rod protein FlgB; Provisional
 1-108 7.71e-13

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 171613  Cd Length: 136  Bit Score: 60.92  E-value: 7.71e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645   1 MSLFYGNGIALTEKTLDLLWGRQNLTVNNIANVDTPNYKSKYLTFENELLHRISTAEKGG---QKKVHVARAIDGQRARI 77
Cdd:PRK12621   1 MKSLFESHINLVGKVMDMQLQRQNVVMSNLANVNTPGYKPRELEFEKELQAALGLDAKGKmtrTEKNHLPAVFDPEGFEP 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 497222645  78 HSTRNESSRL--DGNNVDMDQEQVELVKTTYAY 108
Cdd:PRK12621  81 EWSKAFKPRVvhGEDRVDLDKEMAKMAKNTLQY 113
 
Name Accession Description Interval E-value
FlgB COG1815
Flagellar basal body rod protein FlgB [Cell motility];
1-127 5.19e-30

Flagellar basal body rod protein FlgB [Cell motility];


Pssm-ID: 441420  Cd Length: 135  Bit Score: 104.99  E-value: 5.19e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645   1 MSLFYGNGIALTEKTLDLLWGRQNLTVNNIANVDTPNYKSKYLTFENELLHRISTAEKGGQKKVHVARAIDGQ-----RA 75
Cdd:COG1815    1 MSILFDKTFGLLEKALDLRSLRQEVIASNIANADTPGYKARDVDFEAALKAALGGGSAGLALATTNPRHIPGSagssvSP 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 497222645  76 RIHSTRNESSRLDGNNVDMDQEQVELVKTTYAYQYMVNSVNNDIKRLMAAVK 127
Cdd:COG1815   81 EVLYRTPTQPSLDGNTVDLDEEMAKLAENALQYQAALTFLNKKFSMLKTAIK 132
FlgB TIGR01396
flagellar basal-body rod protein FlgB; This model represents FlgB, one of several components ...
 5-127 3.24e-23

flagellar basal-body rod protein FlgB; This model represents FlgB, one of several components of bacterial flagella that share a domain described by pfam00460. FlgB is part of the basal body. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 273598 [Multi-domain]  Cd Length: 131  Bit Score: 87.45  E-value: 3.24e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645    5 YGNGIALTEKTLDLLWGRQNLTVNNIANVDTPNYKSKYLTFENELLHRI-------STAEKGGQKKVHV-ARAIDGQRAR 76
Cdd:TIGR01396   1 FSNAFGLLQQALDVRSLRQEVIANNIANVDTPGYKAKDVSFEAELKKALdnernskLTLARTDTRPRHLnAQDSNSVEPS 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 497222645   77 IHSTRNESSRLDGNNVDMDQEQVELVKTTYAYQYMVNSVNNDIKRLMAAVK 127
Cdd:TIGR01396  81 LQYDYTTQVKNDGNNVDIDQEMAELAQNQMHYQALTQFLNGKIKGLNYVLR 131
flgB PRK12621
flagellar basal body rod protein FlgB; Provisional
 1-108 7.71e-13

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 171613  Cd Length: 136  Bit Score: 60.92  E-value: 7.71e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645   1 MSLFYGNGIALTEKTLDLLWGRQNLTVNNIANVDTPNYKSKYLTFENELLHRISTAEKGG---QKKVHVARAIDGQRARI 77
Cdd:PRK12621   1 MKSLFESHINLVGKVMDMQLQRQNVVMSNLANVNTPGYKPRELEFEKELQAALGLDAKGKmtrTEKNHLPAVFDPEGFEP 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 497222645  78 HSTRNESSRL--DGNNVDMDQEQVELVKTTYAY 108
Cdd:PRK12621  81 EWSKAFKPRVvhGEDRVDLDKEMAKMAKNTLQY 113
flgB PRK12623
flagellar basal body rod protein FlgB; Provisional
 11-119 1.50e-11

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 183630  Cd Length: 131  Bit Score: 57.49  E-value: 1.50e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645  11 LTEKTLDLLWGRQNLTVNNIANVDTPNYKSKYLTFENELLHRISTAEKGGQKKVHVARAIDGQRARIHSTRNESSRLDGN 90
Cdd:PRK12623  15 LLKKGLDASSYRGKVISNNIANVNTKGYKRHYVTFEENLKNNLDNLELKTTNEKHINDGVEFGQIKEKVDESTSMRTDGN 94

                         90       100
                 ....*....|....*....|....*....
gi 497222645  91 NVDMDQEQVELVKTTYAYQYMVNSVNNDI 119
Cdd:PRK12623  95 NVDIDNEMVNQAANTLMYNALITQLNNRL 123
flgB PRK12622
flagellar basal body rod protein FlgB; Provisional
 9-113 2.21e-10

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 183629  Cd Length: 135  Bit Score: 54.55  E-value: 2.21e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645   9 IALTEKTLDLLWGRQNLTVNNIANVDTPNYKSKYLTFENELLHRISTAE-------KGGQKKVHVARAIDGQRARIHSTR 81
Cdd:PRK12622   8 VDLSHRYLDVLSLRQSVIADNIANVDTPNFKRSKVTFESELERAILNEDkndlsliRGNDKHLSGFKELGYLDVKPHRML 87

                         90       100       110
                 ....*....|....*....|....*....|....
gi 497222645  82 NESSRL--DGNNVDMDQEQVELVKTTYAYQYMVN 113
Cdd:PRK12622  88 DHLSTLnnNGNNVDIDSEMKALVQNQMMYHLFTN 121
flgB PRK12620
flagellar basal body rod protein FlgB; Provisional
 5-126 2.25e-10

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 183628  Cd Length: 132  Bit Score: 54.25  E-value: 2.25e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645   5 YGNGIALTEKtldllwgRQNLTVNNIANVDTPNYKSKYLTFENELLHrISTAEKGGQKKVHVAR--AIDGQRARIHSTRN 82
Cdd:PRK12620  12 HGDALTLREQ-------RMKLIASNLSNVDTPGYKAKDLNFEAALKS-AQGEQDGGLMQTTDAKhyEVGGGGLNPFQITR 83

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 497222645  83 ESSR--LDGNNVDMDQEQVELVKTTYAYQYMVNSVNNDIKRLMAAV 126
Cdd:PRK12620  84 ESDQpsLDGNTVDPDAERAAYGRAALEYRASLSFLESKVRSMLTAI 129
flgB PRK12626
flagellar basal body rod protein FlgB; Provisional
 10-128 6.46e-09

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 183632  Cd Length: 162  Bit Score: 51.08  E-value: 6.46e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645  10 ALTEKTLDLLWGRQNLTVNNIANVDTPNYKSKYLTFENELLHRISTAEkGGQKKVHVARAIDGQRARIHSTRNESS---- 85
Cdd:PRK12626  10 AFGRQALDVRAYRQELLSSNIANADTPGYRARDVDFASTLARALKQTD-GGAAASNAAQLPMAQPAGVTSGMSMAStapg 88

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 497222645  86 -----------------------------RLDGNNVDMDQEQVELVKTTYAYQYMVNSVNNDIKRLMAAVKS 128
Cdd:PRK12626  89 hmagnvkliptggpsddygraqyrmplqpALDGNTVDLDTERVQFADNALHYEAGMTVMTQQIKTMIAAITS 160
flgB PRK12619
flagellar basal body rod protein FlgB; Provisional
 22-127 1.62e-07

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 183627  Cd Length: 130  Bit Score: 46.70  E-value: 1.62e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645  22 RQNLTVNNIANVDTPNYKSKYLTFeNELLhRISTAEKGGQKKVHVARAIDGQ---RARIHSTRNESSRLDGNNVDMDQEQ 98
Cdd:PRK12619  22 RASVLANNIANVNTPNFKARDVDF-NEVL-TATMAGNSQQLRVTSDQHISTNadfMTHLKYRMTHHASLDGNTVDKDMET 99

                         90       100
                 ....*....|....*....|....*....
gi 497222645  99 VELVKTTYAYQYMVNSVNNDIKRLMAAVK 127
Cdd:PRK12619 100 TEFARNALNYQASLSFLNGKIKSMLTALK 128
flgB PRK06797
flagellar basal body rod protein FlgB; Reviewed
 16-116 2.30e-07

flagellar basal body rod protein FlgB; Reviewed


Pssm-ID: 180697  Cd Length: 135  Bit Score: 46.55  E-value: 2.30e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645  16 LDLLWGRQNLTVNNIANVDTPNYKSKYLTFEnELLHRISTAEKGGQ------------KKVHVARA-IDGQRARIhSTRN 82
Cdd:PRK06797  12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFA-EQMNKSSALYKSNAadlksnpdlyqtNEMHLPTVnTKNTYAKI-QTKS 89

                         90       100       110
                 ....*....|....*....|....*....|....
gi 497222645  83 ESSRLDGNNVDMDQEQVELVKTTYAYQYMVNSVN 116
Cdd:PRK06797  90 MQTNKDGNSVDVTTEMLDLMKANQLYGISINAIN 123
flgB PRK12624
flagellar basal body rod protein FlgB; Provisional
 11-122 1.72e-06

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 139107  Cd Length: 143  Bit Score: 44.29  E-value: 1.72e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645  11 LTEKTLDLLWGRQNLTVNNIANVDTPNYKSKYLTFENELLHRISTAEKGGQKKV--------HVA--RAIDGQRARIHST 80
Cdd:PRK12624  13 LLERGMNNSIQKRKVISDNIANADVPHFKRSEVIFESMIKRAIESEKIEKEKEVptqisderHIQffKPLDYREVQPKTN 92

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 497222645  81 RN--ESSRLDGNNVDMDQEQVELVKTTYAYQYMVNSVNNDIKRL 122
Cdd:PRK12624  93 LDylTTMRADGNNVDVEKEVVEASNSQMQYMLMIERLNQNYRLL 136
flgB PRK07182
flagellar basal body rod protein FlgB; Reviewed
 1-127 2.79e-06

flagellar basal body rod protein FlgB; Reviewed


Pssm-ID: 75964 [Multi-domain]  Cd Length: 148  Bit Score: 43.72  E-value: 2.79e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645   1 MSLFYGNGIALTEKTLDLLWGRQNLTVNNIANVDTPNYKSKYLTFENELlhriSTAEKGGQkkvhVARAIDGQRARIHST 80
Cdd:PRK07182   1 MGIHFQKALGVHPMAMQLRLTRAELLSANLANVNTPNFQAKDIDFAAEM----QRAKRGNG----VMAAPDRSSAQMLST 72

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 497222645  81 RNESSR---------------------------LDGNNVDMDQEQVELVKTTYAYQYMVNSVNNDIKRLMAAVK 127
Cdd:PRK07182  73 QMSSAQmsspqmmsspqimsspqikyrlpyqpsLDGNTVALNVEQAEFSKNALDYQTSLSFLNMKLTGLKQAIE 146
flgB PRK12685
flagellar basal body rod protein FlgB; Reviewed
 1-127 1.40e-05

flagellar basal body rod protein FlgB; Reviewed


Pssm-ID: 183682  Cd Length: 116  Bit Score: 41.33  E-value: 1.40e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645   1 MSLFYGNGIALTEKTLDLLWGRQNLTVNNIANVDTPNYKSKYLTFENeLLHRISTAEKGGQkKVHVARAIDGQRARihst 80
Cdd:PRK12685   1 MAINLDAALGVHPQTLDFRVERSKVLASNLANAETPGYKARDLDFKA-VMSQINAGMVPNQ-QYEAQYRVPYQNSA---- 74

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 497222645  81 rnessrlDGNNVDMDQEQVELVKTTYAYQYMVNSVNNDIKRLMAAVK 127
Cdd:PRK12685  75 -------DGNTVELGKEQARYSQNAMDYQTSLTFLNMKISGLKSAIE 114
flgB PRK06004
flagellar basal body rod protein FlgB; Reviewed
 22-97 6.22e-04

flagellar basal body rod protein FlgB; Reviewed


Pssm-ID: 235667  Cd Length: 127  Bit Score: 36.99  E-value: 6.22e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645  22 RQNLTVNNIANVDTPNYKSKYL---TFENELLHRISTAEKGGQKKV-----HVARAIDGQRARIHSTRNESSRLDGNNVD 93
Cdd:PRK06004  12 RQKVLAENVANADTPGFRPRDLvepKFDASGQAQAAGASTGGLGMMrtsasHMAPAGASPSFDARRGAGFETRPAGNAVN 91


                 ....
gi 497222645  94 MDQE 97
Cdd:PRK06004  92 LEDE 95
flgB PRK12627
FlgB family protein;
22-99 1.12e-03

FlgB family protein;


Pssm-ID: 237152 [Multi-domain]  Cd Length: 128  Bit Score: 36.25  E-value: 1.12e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 497222645  22 RQNLTVNNIANVDTPNYKSKYLTFENELLHRISTAEKGGQKKVHVARAIDGQRARIHSTRNESSRLDGNNVDMDQEQV 99
Cdd:PRK12627  21 RQAVVARNVANADTPGYRARDLADFAESYRAEGTTGMRATRPGHLNGAAAGAADPVVTDAGGPASPNGNSVSLEEEML 98
FlgC COG1558
Flagellar basal body rod protein FlgC [Cell motility];
22-116 5.79e-03

Flagellar basal body rod protein FlgC [Cell motility];


Pssm-ID: 441166 [Multi-domain]  Cd Length: 135  Bit Score: 34.32  E-value: 5.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645  22 RQNLTVNNIANVDT---PN---YKSKYLTFENELlhrisTAEKGGQKKVHVARAIDGQRA--RIHSTRNESSRLDGN--- 90
Cdd:COG1558   20 RLNVIASNLANANStrtSDggpYRRKQVVFEAVL-----DRAGSGAAGVRVAGIVEDDSPfrLVYDPGHPDADADGYvry 94

                         90       100
                 ....*....|....*....|....*..
gi 497222645  91 -NVDMDQEQVELVKTTYAYQYMVNSVN 116
Cdd:COG1558   95 pNVNVVEEMVDMISASRSYEANVEVIN 121
flgC PRK12632
flagellar basal body rod protein FlgC; Provisional
 29-94 6.80e-03

flagellar basal body rod protein FlgC; Provisional


Pssm-ID: 183637 [Multi-domain]  Cd Length: 130  Bit Score: 34.40  E-value: 6.80e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645  29 NIANVDTPNYKSKYLTFENEllhrISTAEKGGQKKVHVARAIDGQRARI----HSTRNESSRLDGNNVDM 94
Cdd:PRK12632  28 NIANADTPGYRRKTVSFQEA----RDFDPGSGLVSTGPVRLDRSELPRIydpsHPLADETGYYDGSNVDL 93
FlgC TIGR01395
flagellar basal-body rod protein FlgC; This model represents FlgC, one of several components ...
 22-116 9.36e-03

flagellar basal-body rod protein FlgC; This model represents FlgC, one of several components of bacterial flagella that share a domain described by pfam00460. FlgC is part of the basal body. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 130462 [Multi-domain]  Cd Length: 135  Bit Score: 33.87  E-value: 9.36e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497222645   22 RQNLTVNNIANVDT---PN---YKSKYLTFENELLHriSTAEKGGQKKVHVARAIDGQR--ARIHSTRNESSRLDGN--- 90
Cdd:TIGR01395  17 RMNVVSSNLANADStrtPAgdpYRRRRPVFEAELFQ--DRASRPGGSGVKVAKIVEDDSpfKLVYDPTHPDADAEGYvkm 94

                          90       100
                  ....*....|....*....|....*..
gi 497222645   91 -NVDMDQEQVELVKTTYAYQYMVNSVN 116
Cdd:TIGR01395  95 pNVNVVEEMVDMIEASRSYEANVQVFN 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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