|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-551 |
7.72e-148 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 436.88 E-value: 7.72e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 1 MYLNWSIMLMFMVFIFSFVYIFSFYMNSIYIMEYYFNSIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDK 80
Cdd:MTH00165 3 MCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 81 NKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRVGDVMIILSLIFFVNFG 160
Cdd:MTH00165 83 NINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 161 SFDLIS------LNKIELICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMNFY 234
Cdd:MTH00165 163 SWNFIFyldfmkNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 235 CLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGI 314
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 315 QDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTFLYCLRMAYMMLFK 394
Cdd:MTH00165 323 QDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 395 GIKNLILIKFNF-DFFMKFSIFVLCFFVLISGNFMFWLISSNLSAFFISKISKIWTLFMMMILIYFLFIKNTYFITKFVK 473
Cdd:MTH00165 403 DFNLKSLNNLSDeSKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLK 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 474 IDFFYKI-------WNLSFLTSFVFLKKNNKL--LYSSISDWTWMEILGTKTLYTFSLNFLNFNYWIEAKNLNKILLVIL 544
Cdd:MTH00165 483 SLKNYKLssflgsmWFMPFLSTYGISYYPLNLgsLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFL 562
|
....*..
gi 49619221 545 GTILIIF 551
Cdd:MTH00165 563 LWMIILL 569
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-551 |
1.96e-135 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 405.00 E-value: 1.96e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 1 MYLNWSIMLMFMVFIFSFVYIFSFYMNSIYIMEYYFNSIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDK 80
Cdd:MTH00151 3 MSSLSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDP 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 81 NKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRVGDVMIILSLIFFVNFG 160
Cdd:MTH00151 83 FLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 161 SFDLISLNKIELIC--GVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRF-NFLFKMNFYCLI 237
Cdd:MTH00151 163 HWSILSMWDFKLSGwlGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFfPFLSSSSGFSSF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 238 LIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGIQDI 317
Cdd:MTH00151 243 LLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDI 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 318 RMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTFLYCLRMAYMMLFKGIK 397
Cdd:MTH00151 323 RLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMK 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 398 -NLILIKFNFDFFMKFSIFVLCFFVLISGNFMFWLISSNLSAFFISKISKIWTLF--MMMILIYFLFIKNTYFITKFVKI 474
Cdd:MTH00151 403 sSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFviLLGLFLSFGFWDSGFSSSKMVKL 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 475 DFFY-KIWNLSFLTSFVFLK--KNNKLLYSSISDWTWMEILGTKTLYTFSLNFLNFNYWIEAKNLNKILLVILGTILIIF 551
Cdd:MTH00151 483 SFFFsSMWFLSPLSSQPLKSlsLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLV 562
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
7-550 |
4.86e-112 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 344.71 E-value: 4.86e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 7 IMLMFMVFIFSFVY-IFSFYMNSIYIMEYYFNSIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISF 85
Cdd:MTH00209 6 MFSLMLLFLFSFLMfVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 86 CFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRVGDVMIILSLIFFVNFGSFDLI 165
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWNIF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 166 SLNK---IELICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRF-NFLFKMNFYCLILIKI 241
Cdd:MTH00209 166 YLNFnsnLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFfPSLFSSPFFSMSLLLL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 242 SLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGIQDIRMLG 321
Cdd:MTH00209 246 GSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVG 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 322 NFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTFLYCLRMAYMMLFKGIKNL-I 400
Cdd:MTH00209 326 NLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKsL 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 401 LIKFNFDFFMKFSIFVLCFFVLISGNFMFWLISSNLSAFFISKISKIWT--LFMMMILIYFLFIKNTYFITKFVKIDFFY 478
Cdd:MTH00209 406 NSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPimLILFGVLLMYMVLKKNFFLIKGYKVNYFL 485
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 49619221 479 -KIWNLSFLTSFVFLKKNNKLLYSSIS--DWTWMEILGTKTLYTFSLNFLNFNYWIEAKNLNKILLVILGTILII 550
Cdd:MTH00209 486 sQMWFLPDLSSQPVNKFTMKLSKTMLKllDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGV 560
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
3-551 |
3.40e-105 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 327.11 E-value: 3.40e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 3 LNWSIMLMFMVFIFSFVYIFSFYMNSIYIMEYYFNSIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNK 82
Cdd:MTH00207 8 SIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 83 ISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRVGDVMIILSLIFFVNFGSF 162
Cdd:MTH00207 88 SRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHW 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 163 DLISL--NKIELICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRF-NFLFKMNFYCLILI 239
Cdd:MTH00207 168 SITNMwqTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFyPFLSSTYWFNPALL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 240 KISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGIQDIRM 319
Cdd:MTH00207 248 LTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRT 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 320 LGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTFLYCLRMAYMMLFKGIKNL 399
Cdd:MTH00207 328 MGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSS 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 400 ILIK-FNFDFFMKFSIFVLCFFVLISGNFMFWLISSNLSAFFISKISKIWTLFMMMILIYFLFIKNTYFITKFVKI---- 474
Cdd:MTH00207 408 PYHHlEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLinnp 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 475 ---DFFYKIWNLSFLTSFVFLKKNNKL--LYSSISDWTWMEILGTK-TLYTFSLNFLNFNYWIEAKNLNKILLVILGTIL 548
Cdd:MTH00207 488 lshFASCLMWFLVPLSSQFIMSTPMNLshNYLKLLDQGWLEMLGAQgTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTI 567
|
...
gi 49619221 549 IIF 551
Cdd:MTH00207 568 III 570
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
6-393 |
2.72e-85 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 276.26 E-value: 2.72e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 6 SIMLMFMVFIFSFVYIFSFYMNSIYIMEYYFNSIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISF 85
Cdd:COG1009 34 AALAPLAAFVLSLLLFPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 86 CFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLV-IYYQSINSYNSGMMTIISNRVGDVMIILSLIF-FVNFGSFD 163
Cdd:COG1009 114 FAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIgFWYEKPSARRAARKAFLVTRVGDLGLLLGILLlGAIAGTLN 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 164 L----------ISLNKIELICgVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMN- 232
Cdd:COG1009 194 FsellaaaptiLSSPLLTLIL-LLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSp 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 233 FYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSfF 312
Cdd:COG1009 273 VWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHA-T 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 313 GIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVE-FFFFKINNIILFMIFILGILSTFLYCLRMAYMM 391
Cdd:COG1009 352 GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLV 431
|
..
gi 49619221 392 LF 393
Cdd:COG1009 432 FF 433
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-551 |
2.95e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 276.06 E-value: 2.95e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 1 MYLNWSIMLMFMVFIFSFVYIFSFYMNSIYiMEYYFNSIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDK 80
Cdd:MTH00211 29 LHIKKAVKLSFFISLIPLLIFLDQGLETIL-TNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 81 NKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQSINSYNSGMMT-IISNRVGDVMIILSLIFFVNF 159
Cdd:MTH00211 108 NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQaVIYNRIGDIGLLLSMVWLLLN 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 160 GS----FDLISLNKIELICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMNFYC 235
Cdd:MTH00211 188 LNsweiSQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLI 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 236 L-ILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGI 314
Cdd:MTH00211 268 LgAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNE 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 315 QDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTFLYCLRMAYMMLFK 394
Cdd:MTH00211 348 QDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGG 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 395 GIKNLILIKFNFDFF-MKFSIFVLCFFVLISGnfmfWLISSNLSAFFISKISKIWTLFMMMILIYFLFIKNTYFITKFVK 473
Cdd:MTH00211 428 YPRFLSLSPINENYKlLKNPLKRLALGSILAG----FIITSNLPPEKPEILSLPFLLKLMPLLVTIVGLLLGLELVNLTH 503
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 474 IDFFYKIWNLSFLTSF----------VFLKKNNKLLYSSISDWTWMEILGTKTLYTFSLNFLNFNYWIEA---KNLNKIL 540
Cdd:MTH00211 504 KQLKTSTLSFSNMLGYyppiihrllpKLSLKWGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQgliKSYLALL 583
|
570
....*....|.
gi 49619221 541 LVILGTILIIF 551
Cdd:MTH00211 584 LLSLLLILLLF 594
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
6-392 |
1.26e-71 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 240.07 E-value: 1.26e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 6 SIMLMFMVfifSFVYIFSFYMNSIYIMEYYFNSIQNMDFKFY--FLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKI 83
Cdd:MTH00004 39 TVKLAFLI---SLIPLTLFLNSGTESITTNWPWIFTTTFNIPisFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHIT 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 84 SFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQSINSYN-SGMMTIISNRVGDVMIILSLIFFV-NFGS 161
Cdd:MTH00004 116 KFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANtAALQAIIYNRIGDIGLILSMAWLAmTLNT 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 162 FD---LISLNKIELICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMNFY---- 234
Cdd:MTH00004 196 WEiqqLFSPTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTalti 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 235 CLILikiSLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGI 314
Cdd:MTH00004 276 CLCL---GALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNE 352
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 49619221 315 QDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFF-KINNIILFMIFILGILSTfLYCLRMAYMML 392
Cdd:MTH00004 353 QDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTsYLNAWALLLTLLATSFTA-AYSLRMILLVQ 430
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
6-494 |
2.01e-70 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 237.18 E-value: 2.01e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 6 SIMLMFMVFIFSFVYIFSFYMNS----IYIMEYYFNSIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKN 81
Cdd:TIGR01974 33 GIGSVGLSAALSAFVFVDFFLNGegeaFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 82 KISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLV-IYYQSINSYNSGMMTIISNRVGDVMIILSLIF-FVNF 159
Cdd:TIGR01974 113 YSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLiFWYF 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 160 GSFDLISL---------NKIELICgVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFK 230
Cdd:TIGR01974 193 GTLNFQEVfalapgaffSALTLIC-LLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFE 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 231 MNFYCLILIK-ISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIH 309
Cdd:TIGR01974 272 LSPTALYLVTiIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIH 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 310 SFFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTFLYCLRMAY 389
Cdd:TIGR01974 352 AMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIF 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 390 MMLFKGIKNLILIKF-NFDFFMKFSIFVLCFFVLISGNFMFWLISSNLSAFFISKISK----------IWTLFMMMI--- 455
Cdd:TIGR01974 432 MVFHGKERHEADAHPhESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKGVLPTSAEPAlehhhvpaleIWSPTAVAIlgi 511
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 49619221 456 -LIYFLFIKNTYFITKFVK-----IDFFYKIWNLSFLTSFVFLKK 494
Cdd:TIGR01974 512 lLAYLLYLGNPTLPAKIAQrhsglYRLLLNKWYFDELYDKVFVKP 556
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
3-550 |
2.61e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 232.11 E-value: 2.61e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 3 LNWSIMLMFMVFIFSFVYIFSFYMNSIYIMEYYFNsiqnmdfkFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNK 82
Cdd:MTH00095 4 LIFLILFFFFFLLLFILFLPFMKLNLFFLEWDFLS--------LKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 83 ISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRVGDVMIILSLIFFVNFGSF 162
Cdd:MTH00095 76 NYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYY 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 163 dLISLNKIELICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMNFYCLILIKIS 242
Cdd:MTH00095 156 -FFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 243 LMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGIQDIRMLGN 322
Cdd:MTH00095 235 LFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSN 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 323 FFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTFLYCLRMAYMMLFKGIKNLILi 402
Cdd:MTH00095 315 NGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNV- 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 403 kFNFDFFMKFSIFVLCFFVLIsgnFMFWLISSNLSAFFISKISKIWTLFMMMILIYFLFikntYFITKFVKIDFFYKIWN 482
Cdd:MTH00095 394 -YSSSVLMNFLSLMLVFFSVF---FLWWLNFNLLNLPSLFLYLDFYVPLFYLFMIMLFS----FFFFKLLFKELKYKFFV 465
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 49619221 483 LSFLTSFVFLKKNNKLLYSSISDwtwmeiLGTKTLYTFSLNFLNFNYWIEAKNLNKILLVILGTILII 550
Cdd:MTH00095 466 DYFAKNVIYKLKNLKFFDLFLNK------FGYKGFNFFSSFSFFFFSYMKSFKYNSLLILLFLIFLFL 527
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
9-395 |
6.38e-69 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 233.51 E-value: 6.38e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 9 LMFMVFIFSFVYIFSFY---MNSIYIMEYYFNSIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISF 85
Cdd:PRK06590 38 LVGLSALLSLVVFFDFLlggGRAFSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 86 CFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQSINSYN-SGMMTIISNRVGDVMIILSLIF-FVNFGSFD 163
Cdd:PRK06590 118 FAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGaAAMKAFIVNRVGDVGLALGIFLlFAEFGSLN 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 164 ------------LISLNKIELICgVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKM 231
Cdd:PRK06590 198 ydevfaaapqffGLGWSALTLIC-LLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFEL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 232 NFYCLILIKI-SLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHS 310
Cdd:PRK06590 277 SPEALLFVAIvGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHA 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 311 FFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFFKiNNIILFMIFILGILSTFLYCLRMaYM 390
Cdd:PRK06590 357 MHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFAN-GHINLFVAGLVGAFLTAFYSFRL-IF 434
|
....*
gi 49619221 391 MLFKG 395
Cdd:PRK06590 435 LVFHG 439
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
15-551 |
7.91e-65 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 222.54 E-value: 7.91e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 15 IFSFVYIFSFYMNSIYIMEYYFNSIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCFIVLLFVS 94
Cdd:MTH00208 70 LINLLIWILLGCPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 95 SMIILILMPNMFMIILGWDGLGLVSYCLVIYYQSINSYN-SGMMTIISNRVGDV-MIILSLIFFVNFGSFDL---ISLNK 169
Cdd:MTH00208 150 NMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANsSALQAVIYNRIGDIgIILFLSLSLINFNSWNLneiLSLNN 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 170 IE----LICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFK-MNFYCLILIKISLM 244
Cdd:MTH00208 230 SNsfliNILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISnSPWFLSLCLILGSL 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 245 TMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGIQDIRMLGNFF 324
Cdd:MTH00208 310 TALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLS 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 325 KLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTFLYCLRMAYMMLFKGIKNLILIKF 404
Cdd:MTH00208 390 FLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPI 469
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 405 N-FDFFMKFSIFVLCFFVLISGnfmfWLISS---NLSAFFISKISKIWTLFMMMILIYFLFIKNTYFITKFVKIDFFYKI 480
Cdd:MTH00208 470 SeENPNLTNPLLRLAIGTIISG----WFFSNfvfNLPPLTLPLILKSLPLIVTIIGAAFSFSFLLSLSSNPINSNFFSFL 545
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 49619221 481 WNLSFLTSFVFLKKNNKLLYSSIS------DWTWMEILGTKTLYTFSLNFLNFNYWIEAKNLNKILLVILGTILIIF 551
Cdd:MTH00208 546 SNQWFFVNISHSIIISFSFFTSLFgstrtlDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLIL 622
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
38-358 |
6.77e-63 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 216.70 E-value: 6.77e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 38 SIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGL 117
Cdd:MTH00066 68 NIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 118 VSYCLV-IYYQSINSYNSGMMTIISNRVGDVMIILSLIFFV-NFGSFDL---ISLNKIELICGVMILIAAFTKSAQIPFS 192
Cdd:MTH00066 148 MSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWLAmNTNSWELqqiFLLNDNSTLPLLGLILAAAGKSAQFGLH 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 193 AWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMNFYCL-ILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQL 271
Cdd:MTH00066 228 PWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALtICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQL 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 272 SMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFY 351
Cdd:MTH00066 308 GLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFF 387
|
....*..
gi 49619221 352 SKDLIVE 358
Cdd:MTH00066 388 SKDAIIE 394
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
41-358 |
1.07e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 208.15 E-value: 1.07e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 41 NMDFKFyflfDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSY 120
Cdd:MTH00137 81 NISFKF----DHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSF 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 121 CLVIYYQSINSYNSG-MMTIISNRVGDVMIILSLIFFV-NFGSFDL----ISLNKIELICGVMILIAAFT-KSAQIPFSA 193
Cdd:MTH00137 157 LLIGWWYGRADANTAaLQAVIYNRVGDIGLILAMAWMAtNLNSWEIqqifALSKDFDLTLPLLGLILAATgKSAQFGLHP 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 194 WLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMN----FYCLILikiSLMTMMMAGISAFFETDFKKIIAFSTLS 269
Cdd:MTH00137 237 WLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNqtalTTCLCL---GALTTLFTATCALTQNDIKKIVAFSTSS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 270 QLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGG 349
Cdd:MTH00137 314 QLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAG 393
|
....*....
gi 49619221 350 FYSKDLIVE 358
Cdd:MTH00137 394 FFSKDAIIE 402
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
38-358 |
1.41e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 207.78 E-value: 1.41e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 38 SIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGL 117
Cdd:MTH00108 70 TIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGI 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 118 VSYCLVIYYQSINSYNSG-MMTIISNRVGDVMIILSLI-FFVNFGSFDL---ISLNKIELICGVM-ILIAAFTKSAQIPF 191
Cdd:MTH00108 150 MSFLLIGWWYGRTDANTAaLQAILYNRIGDIGFILAMAwFLLNLNSWDLqqiFMLNPNNSNLPLMgLLLAATGKSAQFGL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 192 SAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMNFYCLILIK-ISLMTMMMAGISAFFETDFKKIIAFSTLSQ 270
Cdd:MTH00108 230 HPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLcLGAITTLFTAICALTQNDIKKIVAFSTSSQ 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 271 LSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGF 350
Cdd:MTH00108 310 LGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGF 389
|
....*...
gi 49619221 351 YSKDLIVE 358
Cdd:MTH00108 390 YSKDLIIE 397
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
46-494 |
1.81e-57 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 202.23 E-value: 1.81e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 46 FYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLV-I 124
Cdd:MTH00020 74 FGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 125 YYQSINSYNSGMMTIISNRVGDVMIILSLIF-FVNFGSFDLISL---------NKIELICgVMILIAAFTKSAQIPFSAW 194
Cdd:MTH00020 154 WLTRIEANKAAIKAMLVNRVGDIGLLLAMFLlWDRFGSLDFSSVfnmvvsapsSDITLIC-LFLFIGAVGKSAQLGLHTW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 195 LPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMNFYCLILIKI-SLMTMMMAGISAFFETDFKKIIAFSTLSQLSM 273
Cdd:MTH00020 233 LPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIvGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGY 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 274 MMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSK 353
Cdd:MTH00020 313 MVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSK 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 354 DLIVEFFFFKINNIILFMIFILGILSTFLYCLRMAYMMLfkgIKNLILIKFNF------DFFMKFSIFVLCFFVLISG-- 425
Cdd:MTH00020 393 DLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTF---LSNTNLKKAVFfhlhegDWNLLLPLGILALGSIFVGyl 469
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 49619221 426 -NFMFWLISSNLSAFFISKISKIWTLFMM--MILIYFLFIKNTYFITKFVKI------DFFYKIWNLSFLTSFVFLKK 494
Cdd:MTH00020 470 aKEMIWSFQITLPPIVPLSIKLLPVFLSLggIGLVIILYFYSSKTFRVPFSFigrnsyTFLGSAWQFNYILNYFLIKK 547
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
46-390 |
1.74e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 194.07 E-value: 1.74e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 46 FYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLV-I 124
Cdd:MTH00210 74 FGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 125 YYQSINSYNSGMMTIISNRVGDVMIILSLIFFVN-FGSFD----------LISLNKIELICgVMILIAAFTKSAQIPFSA 193
Cdd:MTH00210 154 WLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEfstissllvtNINKESLTIIC-LLLFIGAVGKSAQLGLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 194 WLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMNFYCLILIKI-SLMTMMMAGISAFFETDFKKIIAFSTLSQLS 272
Cdd:MTH00210 233 WLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTIlGALTAFFAATVGVVQNDLKKVIAYSTCSQLG 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 273 MMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYS 352
Cdd:MTH00210 313 YMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYS 392
|
330 340 350
....*....|....*....|....*....|....*...
gi 49619221 353 KDLIVEFFFFKINNIILFMIFILGILSTFLYCLRMAYM 390
Cdd:MTH00210 393 KDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYL 430
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
48-365 |
5.24e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 194.02 E-value: 5.24e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 48 FLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQ 127
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 128 S-INSYNSGMMTIISNRVGDVMIILSLIF-FVNFGSFDLISLNKIEL-----------------------ICGVMILIAA 182
Cdd:MTH00032 156 TrIQANKAAIKAIVVNRVGDVGVILGMVLiYKTIGSLDFLTFNGGSVgsgimdrgyygggayesplapfaIIGILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 183 FTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMNFYCLILIKI-SLMTMMMAGISAFFETDFKK 261
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIfGALTAFFAATVGLVQNDLKK 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 262 IIAFSTLSQLSMMMITISL-GSMELAFFHLIMHAFFKSLLFLCAGLVIHSF-FGIQDIRMLGNFFKLSPFISTSMIISLF 339
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTtVDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
330 340
....*....|....*....|....*.
gi 49619221 340 SLMGFPFIGGFYSKDLIVEFFFFKIN 365
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILELTYSGRN 421
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
43-386 |
6.22e-52 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 191.02 E-value: 6.22e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 43 DFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCL 122
Cdd:PRK12650 70 DVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 123 VIyyQSINSYNSGMM-TIISNRVGDVMIILSLIFFVN-FGSFDLISL-------NKIELICGVMILIA--AFTKSAQIPF 191
Cdd:PRK12650 150 IA--RSGSGGEAGSIrTLILTFFGGLTLLAAVAIAATqTGTTSLSGIlhsdvwaEKPGLTTVVAVLIAvaAFTKSAQFPF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 192 SAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMN-FYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQ 270
Cdd:PRK12650 228 HFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVaVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 271 LSMMMITISLGS---MELAFFHLIMHAFFKSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFI 347
Cdd:PRK12650 308 LGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 49619221 348 GGFYSKDLIVEFF----FFKINNIILFMIFILGILSTFLYCLR 386
Cdd:PRK12650 387 FGFVSKEGMLTAFleapGGNAGVVLLLVGAALGAVFTFAYSAR 429
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
48-395 |
6.74e-47 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 174.06 E-value: 6.74e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 48 FLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLV-IYY 126
Cdd:PRK07376 87 YVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVgFWY 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 127 QSINSYNSGMMTIISNRVGDVMIILSLI-FFVNFGSFD----------LISLNKIE----LICGVMILIAAFTKSAQIPF 191
Cdd:PRK07376 167 DRKGAADAAQKAFVVNRVGDFGLLLGILgLFWATGSFDfdgiadrlseLVSSGAVSgwlaLLLCILVFLGPMAKSAQFPL 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 192 SAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMNFYCLILIKIS-LMTMMMAGISAFFETDFKKIIAFSTLSQ 270
Cdd:PRK07376 247 HVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTgAITAFLGASIALTQNDIKKGLAYSTISQ 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 271 LSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGI--------QDIRMLGNFFKLSPFISTSMIISLFSLM 342
Cdd:PRK07376 327 LGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVvghdpvlaQDMRLMGGLRKYMPITAITFLIGCLAIS 406
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 49619221 343 GFPFIGGFYSKDLIVEFFFfkINNIILFMIFILGILSTFLYCLRMaYMMLFKG 395
Cdd:PRK07376 407 GIPPFAGFWSKDEILGAAF--EANPALWFVGFLTAGMTAFYMFRM-YFLTFEG 456
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
44-391 |
8.40e-46 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 166.48 E-value: 8.40e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 44 FKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLV 123
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 124 IYYQSINSYNSGMMTIISNRVGDVMIILSLIF-FVNFGSFDLISL--------NKIELICGVMILIAAFTKSAQIPFSAW 194
Cdd:COG0651 148 ALGGTKEALRAGLKYLILNLVGSALFLLGVGLlYGATGTLNMADLaarlaeldPGLLLAAFALLLVGFGIKAALFPLHFW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 195 LPAAMA-APTPVSSLVhSSTLVTAGVYLLMRFNFLF----KMNFYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLS 269
Cdd:COG0651 228 LPDAYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLfgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 270 QLSMMMITISLGS---MELAFFHLIMHAFFKSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPF 346
Cdd:COG0651 307 QIGYILLGLGLGTplgLAGALFHLLNHALAKALLFLAAGAIERA-TGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPP 385
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 49619221 347 IGGFYSKDLIVEFFFFKINNIILFMIFILGILsTFLYCLRMAYMM 391
Cdd:COG0651 386 LSGFVSKWLLLQAALEAGAWLLAAVLLLSSLL-TLAYFVRIFGRA 429
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
8-464 |
1.82e-44 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 164.67 E-value: 1.82e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 8 MLMFMVFIFSFVYIFSFYMNSIYIMEYYFNSIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCF 87
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 88 IVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRVGDVMIILsLIFFVNFGSFdlisl 167
Cdd:MTH00063 81 LIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGS----- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 168 nkIELICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMNFYCLILIKISLMTMM 247
Cdd:MTH00063 155 --GSFLCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIF 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 248 MAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGIQDIRMLGNFFKLS 327
Cdd:MTH00063 233 ITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 328 PFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTFLYCLRMayMMLFKGIKNLILIKFNFD 407
Cdd:MTH00063 313 SWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRL--CLILFGVKSSLSSGVRFL 390
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 49619221 408 FFMkfsIFVLCFFVLISGNFMFWLISSNLSAFFISKISKIWTLFMMMILIYFLFIKN 464
Cdd:MTH00063 391 FFN---SGLMVFLWLFINYYVFLLLDEVVYLGVFISLVLLLVQLLGLLVGVLFYDSN 444
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
5-357 |
7.97e-43 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 159.37 E-value: 7.97e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 5 WSIMLMFMVFIFSFVYIFSFYMNSIYIMEYYFNSIQNMDFkFYFLFDWMSILFSITVLMISSMVIMYSKSYMNE------ 78
Cdd:PRK06525 29 LGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGDVAL-FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPgnrehp 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 79 -DKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRVGDV-MIILSLIFF 156
Cdd:PRK06525 108 vHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLgLYLAAATLF 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 157 VNFGSFDLISLNKIE----LICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRfnFLFKMN 232
Cdd:PRK06525 188 LQTGTFALSALSGLHgslkYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFAR--AIQSMG 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 233 FY----CLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSM------ELAFFHLIMHAFFKSLLFL 302
Cdd:PRK06525 266 PIphviGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFL 345
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 49619221 303 CAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIV 357
Cdd:PRK06525 346 VAGALSYS-CGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
16-358 |
4.67e-42 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 160.85 E-value: 4.67e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 16 FSFVYIFSFY---MNSIYIMEYYfNSIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCFIVLLF 92
Cdd:PRK12647 26 ALFLYFLSFIpeiAAGETVRGGY-AWVPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLF 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 93 VSSMIILILMPNMFMIILGWDGLGLVSYCLVIY-YQSINSYNSGMMTIISNRVGDVMIILSLIFFVNF-GSFDLIS-LNK 169
Cdd:PRK12647 105 MASMLGLVLSDNLITLFVFWELTSITSFLLIGFnHEREAARRAALQALLVTGGGGLALLAGLILLGNVtGTYSLSElLAS 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 170 IELICG--------VMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFN-FLFKMNFYCLILIK 240
Cdd:PRK12647 185 GDVIREhplylailLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNpVLGGTPLWQTILPL 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 241 ISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGS---MELAFFHLIMHAFFKSLLFLCAGLVIHSfFGIQDI 317
Cdd:PRK12647 265 FGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDI 343
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 49619221 318 RMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVE 358
Cdd:PRK12647 344 TKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYE 384
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
2-393 |
8.07e-41 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 157.70 E-value: 8.07e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 2 YLNWSIMLMFMVFIFSFVYIFSFYMNSIYIMeYYFNSIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKN 81
Cdd:TIGR00940 26 HIGWFVLAIPLVCFLYTLGLYPYTASGGVLH-YTIDWVPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEP 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 82 KISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYY--QSINSYNSGMMTIISNRVGDVMIILSLIFFVNF 159
Cdd:TIGR00940 105 LPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWhhRAHSRYGAQKSLTITVFGGLAMLGGLILLGKIT 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 160 GSF---------DLISLNKIELICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFK 230
Cdd:TIGR00940 185 GSFsidaviasaDAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFA 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 231 -MNFYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSMEL----------------AFFHLIMH 293
Cdd:TIGR00940 265 gTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINH 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 294 AFFKSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVE---------FFFFKI 364
Cdd:TIGR00940 345 ATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnPFDTVT 423
|
410 420
....*....|....*....|....*....
gi 49619221 365 NNIILFMIFILGILSTFLYCLRMAYMMLF 393
Cdd:TIGR00940 424 LGYLFPYVATVASVFTFVYSLRFIHGVFF 452
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
41-389 |
1.44e-40 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 157.39 E-value: 1.44e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 41 NMDFKFYFlfDWMSILFSITVLMISSMVIMYSKSYMNEDKNKI-SFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVS 119
Cdd:PRK12644 65 GLDLAFRL--DALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLS 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 120 YCLVIYY-QSINSYNSGMMTIISNRVGD-VMIILSLIFFVNFGSFdLISlnkiELICG-----------VMILIAAFTKS 186
Cdd:PRK12644 143 FLLIGHYaERAASRRAALQALLVTTAGGlAMLVGIIILGQAAGTY-RLS----ELLADpptgpavsvavVLILVGALSKS 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 187 AQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLF-KMNFYCLILIKISLMTMMMAGISAFFETDFKKIIAF 265
Cdd:PRK12644 218 AIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFaDVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAY 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 266 STLSQLSMMMITISLGSMELAFFHLIM---HAFFKSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMIISLFSLM 342
Cdd:PRK12644 298 GTVSQLGFLTVLVGIGTRDAALAGLAMllaHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMA 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 49619221 343 GFPFIGGFYSKDLIVEFFF----FKINNIILFMIFILGILSTFLYCLRMAY 389
Cdd:PRK12644 377 GLPPLLGFVAKEAALEAVLhdgaLGPAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
42-387 |
2.59e-38 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 150.29 E-value: 2.59e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 42 MDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKI-SFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSY 120
Cdd:PRK12646 68 LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 121 CLVIY-YQSINSYNSGMMTIISNRVGDV-----MIILSLIFFVN-----FGSFDLISLNKIELICGVMILIAAFTKSAQI 189
Cdd:PRK12646 148 LLISYwYNNGDSQFGAIQSFMITVFGGLallvgFIMLYIMTGTNniteiLGQADHIKNHGLFIPMIFMFLLGAFTKSAQF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 190 PFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKM-NFYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTL 268
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLsNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 269 SQLSMMMITISLGSMEL-----------------AFFHLIMHAFFKSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFIS 331
Cdd:PRK12646 308 SQLGMIMAMVGIGGGYAqhqqdaiasiyvfvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMN 386
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 49619221 332 TSMIISLFSLMGFPFIGGFYSKDLIVEFF--------FFKINNIILFMIFILGILSTFLYCLRM 387
Cdd:PRK12646 387 LVMTIAALSMAGVPFLNGFLSKEMFLDALtqtgqlsqFSLISMIIIVFIGVIASIFTFTYALYM 450
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
46-361 |
6.85e-38 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 149.18 E-value: 6.85e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 46 FYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIY 125
Cdd:PRK12648 70 LSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGY 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 126 YQSINSYNSG--MMTIISNRVGDVMIILSLIFFVNFGSFDL-ISLNKIELICG--------VMILIAAFTKSAQIPFSAW 194
Cdd:PRK12648 150 WHHRADARRGarMALTVTGAGGLALLAGVLLLGHIVGSYDLdVVLAAGDLIRAhplyppalVLILLGAFTKSAQFPFHFW 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 195 LPAAMAAPTPVSSLVHSSTLVTAGVYLLMRF-NFLFKMNFYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSM 273
Cdd:PRK12648 230 LPHAMAAPTPVSAYLHSATMVKAGVFLLARLwPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGL 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 274 MMITISLGSmELA----FFHLIMHAFFKSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGG 349
Cdd:PRK12648 310 ITLLLGLGS-PLAavaaIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNG 387
|
330
....*....|..
gi 49619221 350 FYSKdlivEFFF 361
Cdd:PRK12648 388 FLSK----EMFF 395
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
41-387 |
2.36e-37 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 147.38 E-value: 2.36e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 41 NMDFKFYFlfDWMSILFSITVLMISSMVIMYSKSYMNEDKNKIS-FCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVS 119
Cdd:PRK12645 69 GINFTLYV--DGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLGnFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 120 YCLVIYY----QSINSYNSGMMTIISNrvGDVMIILSLIFFVNFGSF---------DLISLNKIELICGVMILIAAFTKS 186
Cdd:PRK12645 147 FLLISYWyereASRYGAQKSMLITVFG--GLSMLGGFILLYIMTGSFsiremianaDEIQNSPLFIPAMILILLGAFTKS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 187 AQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKM-NFYCLILIKISLMTMMMAGISAFFETDFKKIIAF 265
Cdd:PRK12645 225 AQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGsQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAF 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 266 STLSQLSMMMITISLGSMEL----------------AFFHLIMHAFFKSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPF 329
Cdd:PRK12645 305 STVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPI 383
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 49619221 330 ISTSMIISLFSLMGFPFIGGFYSKDL-------IVEFFFFKINN--IILFMIFILGILSTFLYCLRM 387
Cdd:PRK12645 384 TFTIALIGALSMAGLPPFNGFLSKEMffesmlnATEANLFSLDTwgVLFPVIAWVASVFTFVYSIIF 450
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
6-356 |
1.92e-36 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 144.26 E-value: 1.92e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 6 SIMLMFMVFIFSFvYIFSFYMNSIYIMEYYFNSIQNMDF--KFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKI 83
Cdd:CHL00025 44 SILLLSIVMIFSL-NLSIQQINGSSIYQYLWSWTINNDFslEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYL 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 84 SFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLV-IYYQSINSYNSGMMTIISNRVGDVMIILS-LIFFVNFGS 161
Cdd:CHL00025 123 RFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGiLGFYWITGS 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 162 FDLISLNKI--ELI------------CGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNF 227
Cdd:CHL00025 203 FEFRDLFEIfnNLIynnevnllfatlCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLP 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 228 LFKMNFYCLILIK-ISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGL 306
Cdd:CHL00025 283 LFIVIPYIMNLISlIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGS 362
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 49619221 307 VIHSFFGI--------QDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLI 356
Cdd:CHL00025 363 VIHSMEPIvgyspdksQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEI 420
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
103-358 |
3.35e-36 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 136.67 E-value: 3.35e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 103 PNMFMIILGWDGLGLVSYCLVIYY-QSINSYNSGMMTIISNRVGDVMIILSLIFFVNFG---SFDLISLNKIE------- 171
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTgtlSFDELSKALTGglnssgl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 172 LICGVMILIAAFTKSAQIPFSAWLPAA-MAAPTPVSSLVhSSTLVTAGVYLLMRFNFLFKM--NFYCLILIKISLMTMMM 248
Cdd:pfam00361 82 LLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPssPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 249 AGISAFFETDFKKIIAFSTLSQLSMMMITISLG---SMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGIQDIRMLGNFFK 325
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 49619221 326 LSPFISTSMIISLFSLMGFPFIGGFYSKDLIVE 358
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
46-358 |
4.06e-34 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 137.65 E-value: 4.06e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 46 FYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIY 125
Cdd:PRK12649 74 FSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGY 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 126 YQS--INSYNSGMMTIISNRVGDVMIILSLIFFVNFGSFDL------------ISLNKIELICGVMILIAAFTKSAQIPF 191
Cdd:PRK12649 154 WRHrpESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIatilqdselienIKGHPLFLITLILIFIGAAAKSAQGPF 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 192 SAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMNFYCLILIK-ISLMTMMMAGISAFFETDFKKIIAFSTLSQ 270
Cdd:PRK12649 234 YIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSgTGMITMVLAGFLAFRQTDIKAILAYSTISQ 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 271 LSMMMITISLGSME-------LAFFHLIMHAFFKSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMIISLFSLMG 343
Cdd:PRK12649 314 LAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHE-AATRDIRKLGGLRKEMPITFIVASIAALAMAG 392
|
330
....*....|....*
gi 49619221 344 FPFIGGFYSKDLIVE 358
Cdd:PRK12649 393 IPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-393 |
7.16e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 122.68 E-value: 7.16e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 51 DWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCFIVLLF-VSSMIILILMPNMFMIIlgwDGLGLVSYCLVIYYQSI 129
Cdd:PRK08375 76 DSLSALFLLVTSILAIAALLYAIGYGEHRQTRFYALFLLLLAgLLGALLTADLFNLFVFL---EIMSLSSYALVAMGGDR 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 130 NSYNSGMMTIISNRVGDVMIILSLIF-FVNFGSFDLISLNKIE------LICGVMILIAAFTKSAQIPFSAWLPAAMAAP 202
Cdd:PRK08375 153 RALAAARKYLIVGLIGSTFLLIGVGLlYGVTGTLNMADLAGALaenptvVTAFGFVLLALALKAAVFPLHTWLPRAYPAA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 203 TPVSSLVHSSTLVTAGVYLLMRFNF-LFKMNF-----YCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMI 276
Cdd:PRK08375 233 PPVVTALLSGLVTKVAVYALIRIYFtVFGGDFrfalgLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 277 TISLGS---MELAFFHLIMHAFFKSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSK 353
Cdd:PRK08375 313 GLALLTplaLAAGLLHLLHHALMKGALFLAAGAIEVT-YGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSK 391
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 49619221 354 DLIVeFFFFKINNIILFMIFILGILSTFLYCLRMAYMMLF 393
Cdd:PRK08375 392 WYLV-VGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFF 430
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-431 |
3.86e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 105.82 E-value: 3.86e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 51 DWMSILFSITVLMISSMVIMYSKSYMNEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQS-I 129
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDrG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 130 NSYNSGMMTIISNRVGDVMIILSLIFFVN-FGSFDLISLN------------------KIELICGVMILIAAFT-KSAQI 189
Cdd:PRK12667 161 DAVEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNMADLSakirglsfpltgglagnpPLALGVALALALWAFTiKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 190 PFSAWLPAAM-AAPTPVSSLVhSSTLVTAGVYLLMRFNFLF---------KMNFYCLILIKISLMTMMMAGISAFFETDF 259
Cdd:PRK12667 241 PNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIfgispslidFRAALSPILIILGAVSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 260 KKIIAFSTLSQLSMMMITISLGS---MELAFFHLIMHAFFKSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMII 336
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHA-AGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 337 SLFSLMGFPFIGGFYSKDLIVEFFFFKiNNIILFMIFILGILSTFLYCLRMAYMMLFKGIKNLILIKFNFDFFMKFSIFV 416
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLES-GFYLPALVLLIASAISLVGYFRAWYSLFFGKPKSGEEVEHKESPSMSVVILV 477
|
410
....*....|....*
gi 49619221 417 LCFFVLISGNFMFWL 431
Cdd:PRK12667 478 LALAVLILGILALFL 492
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
46-362 |
2.21e-23 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 104.20 E-value: 2.21e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 46 FYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKI--SFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLV 123
Cdd:PRK06521 74 FHLRLDALSAFFLLVISLLGAAASLYSLGYFREYEGKGpgAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLV 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 124 IYYQSINSYNS-GMMTIISNRVGDVMIILSL-IFFVNFGSFDLISLNKIEL---ICGVMILIAAF---TKSAQIPFSAWL 195
Cdd:PRK06521 154 IANHREAEIRRaGFLYLLMAHAGALAILLAFgLLARESGSYDFAAMRAAHLspfWASLVFLLALFgfgAKAGLVPLHVWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 196 PAAM-AAPTPVSSLVhSSTLVTAGVYLLMRFNFLF---KMNFYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQL 271
Cdd:PRK06521 234 PRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLlgaPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 272 SMMMITISLG--------------SMELAFFHLIMHAFFKSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMIIS 337
Cdd:PRK06521 313 GIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHA-TGTRDMEKLGGLIRRMPWTAWAFLIG 391
|
330 340
....*....|....*....|....*
gi 49619221 338 LFSLMGFPFIGGFYSKDLIVEFFFF 362
Cdd:PRK06521 392 CLAISALPPLNGFVSEWLLLQSLLS 416
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
44-358 |
6.98e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 98.49 E-value: 6.98e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 44 FKFYFLFDWMSILFSITVLMISSMVIMYSKsymnEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLV 123
Cdd:PRK07234 59 FGVTLRADALSGYFILTNALVTLAVIFYCW----ESAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLV 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 124 IYYQSINSYNSGM-MTIISNRVGDVMIILSLIFFVNFGSFDLISLNKIELICGVMILIAAFTKSAQIPFSAWLPAAMAAP 202
Cdd:PRK07234 135 AYPRTDRAIWVGLrYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFALIALGLLVKGGIFVSGLWLPLTHSEA 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 203 TPVSSLVHSSTLVTAGVYLLMRFNFLFkmNFYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGs 282
Cdd:PRK07234 215 EPPVSALLSGVVVKAGVFPLVRCALDV--PGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG- 291
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 49619221 283 melAFFHLiMHAFFKSLLFLCAGlVIHSFFGIQDIRMLGNFFKLSPfistsMIISLFSLMGFPFIGGFYSKDLIVE 358
Cdd:PRK07234 292 ---GLYAL-AHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
44-361 |
3.79e-21 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 97.49 E-value: 3.79e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 44 FKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNE---DKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSY 120
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHmssNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 121 CLVIY-YQSINSYNSGMMTIISNRVGDVMIILSLI-FFVNFGSFDLISLNKIELICGVMILIAAFT---KSAQIPFSAWL 195
Cdd:PRK08667 149 FLVMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIvLFIQTGSFELSPLGASAGILSLVFLLLFLGfgiKAGIIPFHKWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 196 PAAM-AAPTPVSSLVhSSTLVTAGVYLLMRF--NFLFKMNFYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLS 272
Cdd:PRK08667 229 PYAHpASPSNVSALM-SGVMLKVAVYGLVRFlmDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIG 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 273 MMMI--------------TISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMIISL 338
Cdd:PRK08667 308 IILMgiglyvifgvygldTLALLALGGALFHSLNHALFKSLLFLTAGSVVHA-TGTRNIEKMGGLVKLMPYTSALFLVGA 386
|
330 340
....*....|....*....|...
gi 49619221 339 FSLMGFPFIGGFYSKDLIVEFFF 361
Cdd:PRK08667 387 VSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
52-305 |
3.49e-20 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 93.61 E-value: 3.49e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 52 WMSILfsitVLMISSMVIMYSKSYMNEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQsins 131
Cdd:PRK08168 73 VMAAL----VQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYP---- 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 132 yNSGMMTI------ISNRVGDVMIIL-SLIFFVNFGSFdliSLNKI------------ELICGVMILIAAFTKSAQIPFS 192
Cdd:PRK08168 145 -DRPFARLaahkkfIADRLAELLLLAaAALAYLEVGSL---SLSALwahlaaqgaspsLQAAALLLVLAVILKTAQLPVH 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 193 AWLPAAMAAPTPVSSLVHSStLVTAGVYLLMRFNFLFKMNFYC-LILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQL 271
Cdd:PRK08168 221 GWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQM 299
|
250 260 270
....*....|....*....|....*....|....
gi 49619221 272 SMMMITISLGSMELAFFHLIMHAFFKSLLFLCAG 305
Cdd:PRK08168 300 GFMLLECGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
48-433 |
1.01e-17 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 85.94 E-value: 1.01e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 48 FLFDWMSILFSITVLMISSMVIMYSKSYM-NEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLV-IY 125
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLeRRGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 126 YQSINSYNSGMMTIISNRVGDVMII--LSLIFFVnFGSFDLISL---------NKIELICGVMILIAAFT-KSAQIPFSA 193
Cdd:COG1007 146 RDDRRSSEAALKYFLLGALSSGFLLygISLLYGA-TGSLNLAGIaaalaaggaNSPLLLLGLVLVLAGLAfKLSAVPFHM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 194 WLP-AAMAAPTPVSSLVhsSTLV-TAGVYLLMRF---NFLFKMNFYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTL 268
Cdd:COG1007 225 WTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLlveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 269 SQLSMMMITISLGS---MELAFFHLIMHAFFKSLLFLCAGLVIHSFFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFP 345
Cdd:COG1007 303 AHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIP 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 346 FIGGFYSKdliveFFFF----KINNIILFMIFILG-ILSTFlYCLRMAYMMLFKGIKNLILIKFNFDffMKFSIFVLCFF 420
Cdd:COG1007 383 PTAGFFGK-----FYVFsaavEAGLYWLAVIAVLNsVISAY-YYLRVVKAMYFDEPEEEAPISAPPG--LRVALVIAALL 454
|
410
....*....|...
gi 49619221 421 VLISGNFMFWLIS 433
Cdd:COG1007 455 VLLLGIFPGPLLD 467
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
5-436 |
2.43e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 85.15 E-value: 2.43e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 5 WSIMLMFMVFIFSFVYIFSFYMNSIyiMEYYFNSIQ----------NMDFKFYFLFDWMSILFSITVLMISSMVIMYSKS 74
Cdd:PRK08376 35 WAVLISFLTLIVALLVFYEVWNNGT--IVYVLGAESptltlpfgsgGFPIRIIWEVDLFGAFMALIATIVSFLAVLYSIS 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 75 YMNEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQSI-NSYNSGMMTIISNRVGDVMIILSL 153
Cdd:PRK08376 113 YMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTwEAIEAGIKYMFVGSLASSMVLLGI 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 154 -IFFVNFGSFDL------ISLN--KIELICGVMILIAAFTKSAQIPFSAWLPAAM-AAPTPVSSLVHSSTLvtAGVYLLM 223
Cdd:PRK08376 193 aLLYGQYGTLNMaylavkMSENptVVAKIALALFIAGLAMKSGAVPVHMWLPDAYpAAPSSISAMLLVIKQ--AGLYALA 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 224 RFNF-----LFKMNFYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLG---------------SM 283
Cdd:PRK08376 271 RVLFsiygpAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGVGlaalgdpamasygeiAL 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 284 ELAFFHLIMHAFFKSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFfk 363
Cdd:PRK08376 351 AGGIYHIVNHALYKALLFLTAGAVIYE-TGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSA-- 427
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 49619221 364 INNIILFMIFILGILSTFLYCLRMAYMMLFKGIKNLILIKFNFDFFMKFSIFVLCFFVLISGNFMfWLISSNL 436
Cdd:PRK08376 428 LFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVKEPPKPMLVPMLILAIAIIGMGLFP-WQISDKL 499
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
175-311 |
3.92e-16 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 81.24 E-value: 3.92e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 175 GVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSStLVTAGVYLLMRFNFLFKMNFYCLILIKISLMTMMM-AGISa 253
Cdd:PRK08601 207 NLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLIgTGIS- 284
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 49619221 254 FFETDFKKIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSF 311
Cdd:PRK08601 285 LVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRF 342
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
4-393 |
6.26e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 80.81 E-value: 6.26e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 4 NWSIMLMFMVFIFSFVYIFSFYMNSIYIMEYYFNSIqnmDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNedKNKI 83
Cdd:PRK08668 24 NEKIGVIGNALPLLFLIKLYFTLKVGTGEKLTLFFG---GFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKT--KNDA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 84 SFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRVGDVMIILSLIFFVNFGSFD 163
Cdd:PRK08668 99 YFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFD 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 164 LISL---------NKIELICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVY-------------L 221
Cdd:PRK08668 179 FADIsqglindtsTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYgfllvlyvlpgtkL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 222 LMRFNFLFKMNFYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLG---SMELAFFHLIMHAFFKS 298
Cdd:PRK08668 259 FSEFGTYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKG 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 299 LLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGIL 378
Cdd:PRK08668 339 LFFLIFAAVIYR-TGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIG 417
|
410
....*....|....*
gi 49619221 379 StFLYCLRMAYMMLF 393
Cdd:PRK08668 418 S-FLYVFRPLAGVFL 431
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
51-406 |
7.07e-16 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 80.37 E-value: 7.07e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 51 DWMSILFSITVLMISSMVIMYSKsymNEDKNKISFCFIVLLFVSSMII-LILMPNMFMIILGWDGLGLVSYCLVIYYQSI 129
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASW---ESIQKRVKEFYALLLLLEAGVIgVFLALDLFLFYVFWEAMLIPMYLLIGVWGGP 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 130 NSYNSGMMTIISNRVGDVMIILSLI--FFVNFGSFDLISLN------KIELICGVMILIAAFTKSAQIPFSAWLPAAMA- 200
Cdd:TIGR01972 153 NRIYAAMKFFLYTLAGSLLMLLAILglYFLGGGTFDLLELLnlplpfGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVe 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 201 APTPVSSLVhSSTLVTAGVYLLMRFNF-LF--KMNFYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMIT 277
Cdd:TIGR01972 233 APTAGSVIL-AGVLLKMGTYGFLRFNLpLFpdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 278 ISLG---SMELAFFHLIMHAFFKSLLFLCAGlVIHSFFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKD 354
Cdd:TIGR01972 312 IFSFnelGISGAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 49619221 355 LIVEFFFFKinNIILFMIFILGILSTFLYCLRMAYMMLFKGIKNLILIKFNF 406
Cdd:TIGR01972 391 LILLGSFKV--NPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPD 440
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
150-425 |
1.01e-14 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 76.66 E-value: 1.01e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 150 ILSLIFFVNFGSFDLISLNKI------ELICGVMILIAAFTKSAQIPFSAWLP-AAMAAPTPVsSLVHSSTLVTAGVYLL 222
Cdd:COG1008 181 ILALYFLAGALTFDIAELAAAplpltaQLLLFLAFFIAFAVKVPMFPFHTWLPdAHVEAPTAG-SVLLAGVLLKMGGYGL 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 223 MRFNF-LFK--MNFYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLG---SMELAFFHLIMHAFF 296
Cdd:COG1008 260 LRFALpLFPeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALnplGLQGAVLQMVSHGLI 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 297 KSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFfkINNIILFMIFILG 376
Cdd:COG1008 340 TAALFLLVGVLYDR-THTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAF--QVNPWLAILAALG 416
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 49619221 377 ILSTFLYCLRMAYMMLFKGIKNLILIKFNFDFFMKFSIFVLCFFVLISG 425
Cdd:COG1008 417 LILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLG 465
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-382 |
1.04e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 76.78 E-value: 1.04e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 48 FLFDWMSILFSITVLMISSMVIMYSKSYM--NEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIY 125
Cdd:PRK06589 79 LHLEPLGLIFLLLIGFLWICALLYTPKYLaiNNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGH 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 126 YQSINSYNSG-------MMTIISNRVGDVMIILSLIFFVNFGSFDLISLNKIELIcgVMILIAAFTKSAQIPFSAWLPAA 198
Cdd:PRK06589 159 TRNNISLSGGykylkilMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIIL--LLMFIYGIAKTAIFPVHSWLPAA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 199 MAAPTPVSSLVHSSTLVTAGVYLLMRFN-FLFKMNFYCLI------LIKISLMTMMMAGISAFFETDFKKIIAFSTLSQL 271
Cdd:PRK06589 237 MVAHYPVSALLHAVIVVKTGLFCIYKILlYIFGLSYLQRIfaefnwLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQL 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 272 SMMMITISL---GSMELAFFHLIMHAFFKSLLFLCAGlVIHSFFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIG 348
Cdd:PRK06589 317 SLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMG-SIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFS 395
|
330 340 350
....*....|....*....|....*....|....
gi 49619221 349 GFYSKDLIVEFFFFKINNIILFMIFILGILSTFL 382
Cdd:PRK06589 396 GFISKFLILLAASEQNQPWLSIIVMLVVIASSIL 429
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
189-378 |
3.26e-14 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 75.25 E-value: 3.26e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 189 IPFSAWLPAAMA-APTPVSSLVhSSTLVTAGVYLLMRFNFLFKMN--FYCLILIKISLMTMMMAGISAFFETDFKKIIAF 265
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAplWWGVALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 266 STLSQLSMMMITISLGSMELA--------------FFHLIMHAFFKSLLFLCAGLVIHSFfGIQDIRMLGNFFKLSPFIS 331
Cdd:PRK08042 276 HTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFRT-GHRDIEKLGGIGKKMPVIS 354
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 49619221 332 TSMIISLFSLMGFPFIGGFYSKDLIVEfFFFKINNIILFMIFILGIL 378
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQ-SFFKLSNSGAFVARLLGPL 400
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
166-395 |
6.84e-14 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 74.03 E-value: 6.84e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 166 SLNKIELICGVMILIAAFTKSAQI-PFSAWLPAA-MAAPTPVSSLVhSSTLVTAGVYLLMRFNFLFKM-----NFYCLIL 238
Cdd:PRK08377 199 TIDPTVAQVGLALLIFGLAVEAELfPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLMQNangwsSVLKLVI 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 239 IkISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGS---MELAFFHLIMHAFFKSLLFLCAGLVIHSFFG-- 313
Cdd:PRK08377 278 I-MATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITLGGte 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 314 IQDIRMLGnffKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVeFFFFKINNIILFMIFILGILSTFLYCLRMAYMMLF 393
Cdd:PRK08377 357 IEKFEGLG---KRMPLTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRLIHTMWF 432
|
..
gi 49619221 394 KG 395
Cdd:PRK08377 433 KG 434
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
176-395 |
1.17e-13 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 73.43 E-value: 1.17e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 176 VMILIAAFTKSAQIPFSAWLPAAMA-APTPVSSLVhSSTLVTAGVYLLMRFNFLFKMNFYCL----ILIKISLMTMMMAG 250
Cdd:PRK06458 218 VFLLIGFGTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSDfpgrLLLIFGLLSVLVAA 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 251 ISAFFETDFKKIIAFSTLSQLSMMMITISLGSmELAFF----HLIMHAFFKSLLFLCAGLVIHsFFGIQDIRMLGNFFKL 326
Cdd:PRK06458 297 FFLLRQRDIKRLFAYSSIEHMGLIAFALGIGG-PLGIFaallHMLNHSLTKSAIFFASGNVLQ-KYGTRDINVIRGLLKV 374
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 49619221 327 SPFISTSMIISLFSLMGFPFIGGFYSKDLIVEfFFFKINNIILFMIFILGILSTFLYCLRMAYMMLFKG 395
Cdd:PRK06458 375 SPLTGWGLMLGALAIAGMPPFGVFISEFLILT-AGLARGPLLIAILLLLLLTLAFAALVRRVAGMVFGE 442
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
108-357 |
7.03e-13 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 71.08 E-value: 7.03e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 108 IILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRVGDVMIILSLIF-FVNFGSFDLISLNKIELICGVMILIAAFTKS 186
Cdd:PRK12668 118 LFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSFAFGAIAGLGGTAAWLILIGFGVNA 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 187 AQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRfnfLFKMNfycLILIKI-SLMTMMMAgISAFFETDFKKIIAF 265
Cdd:PRK12668 198 AFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR---AFPGT---ELLIYIgAAMAVYGV-FFALLENDLRRLLSY 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 266 STLSQLSMMMITISLGSmEL----AFFHLIMHAFFKSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMIISLFSL 341
Cdd:PRK12668 271 HIVSQVGYMVAGIGIGT-ALaingAVAHAFNHILYKGLLFMSAGAVLYR-TGTEKLTELGGLYRSMPLTALFCLVGALSI 348
|
250
....*....|....*.
gi 49619221 342 MGFPFIGGFYSKDLIV 357
Cdd:PRK12668 349 SAFPLFSGFVSKSMII 364
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
179-352 |
1.05e-12 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 70.71 E-value: 1.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 179 LIAAFT-KSAQIPFSAWLPAAMAAPTPvSSLVHSSTLVTAGVYLLMRFNFLFKMNFYCL-ILIKISLMTMMMAGISAFFE 256
Cdd:PRK07390 227 LIAGPTgKCAQFPLHLWLDEAMEGPNP-ASILRNSVVVATGAWVLIKLQPVLALSPVALtVLIVIGTVTAIGASLVAIAQ 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 257 TDFKKIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSFFGiQDIRMLGNFFKLSPFISTSMII 336
Cdd:PRK07390 306 IDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTIT-QDLTELGGLWSRMPATTLAFLV 384
|
170
....*....|....*.
gi 49619221 337 SLFSLMGFPFIGGFYS 352
Cdd:PRK07390 385 GSAGLVALLPLGGFWA 400
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
175-353 |
3.54e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 68.84 E-value: 3.54e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 175 GVMILIAAFTKSAQIPFSAWLPAAM-AAPTPVSSlVHSSTLVTAGVYLLMRFN-FLFKMNFYCLILIKISLMTMMMAGIS 252
Cdd:PRK12665 212 FAVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHtLLFPGGGLDTLLMVVALLTMVVGILG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 253 AFFETDFKKIIAFSTLSQLSMMMITISLGS---MELAFFHLIMHAFFKSLLFLCAGLvIHSFFGIQDIRMLGNFFKLSPF 329
Cdd:PRK12665 291 AIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGL-IERQAGSSSLRRLGGLAKASPL 369
|
170 180
....*....|....*....|....
gi 49619221 330 ISTSMIISLFSLMGFPFIGGFYSK 353
Cdd:PRK12665 370 LAVLFFVPALNLGGIPPFSGFIGK 393
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
172-353 |
1.95e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 66.32 E-value: 1.95e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 172 LICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMN----FYCLILIKISLMTMM 247
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaaeQFSNVLIGLGIFSIA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 248 MAGISAFFETDFKKIIAFSTLSQLSMMMITISLGS---MELAFFHLIMHAFFKSLLFLCAGlVIHSFFGIQDIRMLGNFF 324
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTplaLFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVF 364
|
170 180
....*....|....*....|....*....
gi 49619221 325 KLSPFISTSMIISLFSLMGFPFIGGFYSK 353
Cdd:PRK08676 365 RLQPVAAWGVILGSAAIIGMPPFPLFLSK 393
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
173-381 |
7.39e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 64.58 E-value: 7.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 173 ICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLF---KMNFYCLILIKISLMTMMMA 249
Cdd:PRK07691 210 VVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFfshDTSFTHYLILILALLTIIFG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 250 GISAFFETDFKKIIAFSTLSQLSMMMITISLG---SMELAFFHLIMHAFFKSLLFLCAGLVIHsFFGIQDIRMLGNFFKL 326
Cdd:PRK07691 290 VIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKR 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 49619221 327 SPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTF 381
Cdd:PRK07691 369 YPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLY 423
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
176-381 |
1.01e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 64.20 E-value: 1.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 176 VMILIAAFT-KSAQIPFSaWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFnflFKMNFYC------LILIKISLMTMMM 248
Cdd:PRK12663 210 ALLFLLAFGmKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRV---FTLLFPQerellhPLLATMAAITMVI 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 249 AGISAFFETDFKKIIAFSTLSQLSMMMITISLGS---MELAFFHLIMHAFFKSLLFLCAGLVIHsFFGIQDIRMLGNFFK 325
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFILLGLALGTpagINGAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYR 364
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 49619221 326 LSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTF 381
Cdd:PRK12663 365 KEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMY 420
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
48-353 |
1.64e-10 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 63.30 E-value: 1.64e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 48 FLFDWMSILFSITVLMISSMVIMYSKSYMnEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIY-Y 126
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYL-EDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALrR 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 127 QSINSYNSGMMTIISNRVGDVMIILSLIFFVNF-GSFDLISL---------NKIELICG-VMILIAAFTKSAQIPFSAWL 195
Cdd:PRK05777 148 DRRRSLEAAIKYFVLGALASGFLLYGMSLLYGAtGSLSFAGIakaladgsgNSLLLLFGlVFLLVGLAFKLSAVPFHMWT 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 196 PAAM-AAPTPVSSLVHSSTLVtAGVYLLMRFNFLFKMNFYC---LILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQL 271
Cdd:PRK05777 228 PDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGLSEdwqQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 272 SMMMITISLGS---MELAFFHLIMHAFFKSLLFLCAGLVIHSFFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIG 348
Cdd:PRK05777 307 GYLLVGLAAGTaegYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTA 386
|
....*
gi 49619221 349 GFYSK 353
Cdd:PRK05777 387 GFWGK 391
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
6-398 |
5.10e-10 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 61.76 E-value: 5.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 6 SIMLMFMVFIFSFVYIFSF-YMNSIYIMEYYFNSIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSksyMNEDKNKIS 84
Cdd:PRK05846 35 ALIGTLLTLLLSLVLWIGFdSSNAGFQFVEKHPWIPRFGISYHLGVDGISLLLVVLTALLTPLAVLAS---WEEIKKRVK 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 85 FCFIVLLFVSSMII----------------LILMPnMFMIILGWDGLGLV--SYCLVIYyqsiNSYNSGMMTIisnrvgd 146
Cdd:PRK05846 112 FYMAALLWLEGGVIgvfaaldlllfyvffeAMLIP-MYFLIGVWGGKNRIyaATKFFLY----TLLGSLLMLV------- 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 147 VMIILSLIFFVNFGSFDLISLNKIELICGVMILI-----AAFT-KSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVY 220
Cdd:PRK05846 180 AIIYLVVVYYNATGTFDIADLLNLPLPPGVQYWLflaffIAFAvKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAY 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 221 LLMRFNF-LFK--MNFYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQlsMMMITISLGSM-----ELAFFHLIM 292
Cdd:PRK05846 260 GLLRFSLpLFPdaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH--MGFVTLGIFAGnqlgiQGAIFQMIS 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 293 HAFFKSLLFLCAGlVIHSFFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVeFFFFKINNIILFmI 372
Cdd:PRK05846 338 HGLSSAALFLLVG-VLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL-LGSFQVNPVIAF-I 414
|
410 420
....*....|....*....|....*.
gi 49619221 373 FILGILSTFLYCLRMAYMMLFKGIKN 398
Cdd:PRK05846 415 ATTGLILAAVYSLWLYQRVMFGPVKN 440
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
48-440 |
4.58e-09 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 58.89 E-value: 4.58e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 48 FLFDWMSILFSITVLMISSMVIMyskSYMNEDKNKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQ 127
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 128 SINSYNSGMMTIISNRVGDVMIILSLIFFVNFGSFDLIS----------LNKIELICGVMILIAAFTKSAQIPFSAWLPA 197
Cdd:PRK06277 145 TEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITdihnallvnpTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSD 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 198 AMAAPTPVSSLVHSS----TLVTAGVYLLMRFNFLFKMNFYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSM 273
Cdd:PRK06277 225 IYAKAKPFGSALLQTfskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGY 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 274 MMITISLG---SMELAFFHLIMHAFFKSLLFLCAGLVIHSfFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGF 350
Cdd:PRK06277 305 VAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIVSYR-TKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGF 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 351 YSKDLIVEfFFFKINNIILFMIFILGILSTFLYCLRMAYMMLFK-GIKNLILIKFNFDFFMKFSIFVLCFFVLISGNFMf 429
Cdd:PRK06277 384 QSKLMLAQ-AAMQANMPELAIIMIIVSIGTFVSMMKAFYLIYLKpKPEELEYKNKKVPKYAVFSLAVLTILCIILGLFP- 461
|
410
....*....|.
gi 49619221 430 WLISSNLSAFF 440
Cdd:PRK06277 462 DLVTNYLYPFA 472
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
168-425 |
1.02e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 57.82 E-value: 1.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 168 NKIELICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMR-FNFLFKMNFYCL------ILIK 240
Cdd:PRK12662 205 NRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRiVYDVFKANFVFTtlpfnnVFMI 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 241 ISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGS---MELAFFHLIMHAFFKSLLFLCAGlVIHSFFGIQDI 317
Cdd:PRK12662 285 LAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTyygLAAAVAYIVNHSIVKSALFMVSG-SISYHFGTTKL 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 318 RMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEfFFFKINNIILFMIFILGILSTFLYCLRMAYMMLFKG-- 395
Cdd:PRK12662 364 EDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILD-AFIKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFESrm 442
|
250 260 270
....*....|....*....|....*....|.
gi 49619221 396 -IKNLILIKFNFDFFMKFSIFVLCFFVLISG 425
Cdd:PRK12662 443 vESKANDKAFKTPNAMVLCIWIMAILSIIVG 473
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
80-433 |
2.93e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 52.52 E-value: 2.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 80 KNKISFCFIVLLFVSSMIIlILMPNMFMIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRVGDVMIILSLIFFvnf 159
Cdd:MTH00160 3 MNSSKLLFLSTLIMGTLIS-ISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILN--- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 160 gsfdLISLNKIELICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMrfnflfkMNFYCLILI 239
Cdd:MTH00160 79 ----MLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLS-------YLINNNFII 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 240 KISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLGSMeLAFFHLIMHAFFKSLLFLcaglvIHSFFGIQDIRM 319
Cdd:MTH00160 148 IIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISEN-LWLIYFLIYSIISLSIIL-----LFNKFNIFFLNQ 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 320 LGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTFLYcLRMAYMMLFKGIKNL 399
Cdd:MTH00160 222 LFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFY-LRISYSSLMLNYNKN 300
|
330 340 350
....*....|....*....|....*....|....
gi 49619221 400 ILIKFNFDFFMKFSIFVLCFFVLISGNFMFWLIS 433
Cdd:MTH00160 301 KWNLKKKKNKFSLILNFLSFISLFGLILSSLLFL 334
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
151-363 |
2.95e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 50.08 E-value: 2.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 151 LSLIFFVNFGSFDLISLN------KIELICGVMILIAAFTKSAQIPFSAWLP-AAMAAPTPVSSLVhSSTLVTAGVYLLM 223
Cdd:PRK06473 178 LGLVWLSGASSFDYEPLRshtlplSTQLLLLAPILVGFGIKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 224 RFN---FLFKMNFYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITISLG---SMELAFFHLIMHAFFK 297
Cdd:PRK06473 257 RFGvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLIS 336
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 49619221 298 SLLFLCAGlVIHSFFGIQDI---RMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFyskdlIVEFFFFK 363
Cdd:PRK06473 337 ALLFLLVG-VVYKKTGSRDVdvlRGLLNPERGLPITGSLMILGVMASAGIPGMVGF-----IAEFLVFR 399
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
48-432 |
3.67e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 49.56 E-value: 3.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 48 FLFDWMSILFSITVLMISSMVIMYSKSYMNEDK-NKISFCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIY- 125
Cdd:TIGR01770 66 FIVDNFALLIKLILLLSTLLTFFFALSYLSKEKiNKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLk 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 126 YQSINSYNSGMMTIISNRVGDVMIILSLIFFVNF-GSFDLISLNKIELICG----------VMILIAAFTKSAQIPFSAW 194
Cdd:TIGR01770 146 RKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFtGSLNFEDLLLFLSNGMlnisllllgiVLILVGLLFKLSAVPFHMW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 195 LPAAM-AAPTPVSSLVHSSTLVtAGVYLLMRFNFLFKMNFYC---LILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQ 270
Cdd:TIGR01770 226 VPDVYeGAPTPVTAFFSIVPKI-AIFAVFLRLFLYILFGFSEawqIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 271 LSMMMITISLGSMEL---AFFHLIMHAFFKSLLFLC-AGLVIHSFFGIQDIRMLGNFFKLSPFISTSMIISLFSLMGFPF 346
Cdd:TIGR01770 305 VGYILIGLLAGTLEGikaVLFYIFIYALMSLGAFGVlSLLRSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPP 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 347 IGGFYSKdLIVEFFFFKINNIILFMIFILGILSTFLYCLRMAYMMLFKGiKNLILIKFNFDFFMKFSIFVLCFFVLISGN 426
Cdd:TIGR01770 385 LAGFFGK-FYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVVKVMYFDK-PERRIPSNPQSKAQSLLLSISALFILFLGL 462
|
....*.
gi 49619221 427 FMFWLI 432
Cdd:TIGR01770 463 FPSLIL 468
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
177-391 |
1.43e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 47.12 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 177 MILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLmrfnFLFKMNFYCLILIKISLMTMMMAGISAFFE 256
Cdd:MTH00112 97 LLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL----LMTSNSLNPTLLLTLAILSTLIGGWGGLNQ 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 257 TDFKKIIAFSTLSQLSMMMITISLgSMELAFFHLIMHAFFKSLLFLCagLVIHSFFGIQDirmLGNFFKLSPFISTSMII 336
Cdd:MTH00112 173 TQLRKIMAFSSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFLT--LNTTSTKTLKD---MMTSWTKSPTLNTTLML 246
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 49619221 337 SLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTFLYcLRMAYMM 391
Cdd:MTH00112 247 TLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFY-LRLTYIS 300
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
185-353 |
2.66e-04 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 43.45 E-value: 2.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 185 KSAQIPFSAWLPAAM-AAPTPVSSLVhSSTLVTAGVYLLMRF---NFLFKMNFYCLILIKISLMTMMMAGISAFFETDFK 260
Cdd:CHL00049 227 KLSLAPFHQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRIfdiPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMK 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 261 KIIAFSTLSQLSMMMITISLGSMELAFFHLIMHAFFKSLLFLCAGLVIHSF---FGIQDIRMLGNFFKLSPFISTSMIIS 337
Cdd:CHL00049 306 RMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFglrTGTDNIRDYAGLYTKDPFLALSLALC 385
|
170
....*....|....*.
gi 49619221 338 LFSLMGFPFIGGFYSK 353
Cdd:CHL00049 386 LLSLGGIPPLAGFFGK 401
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
176-391 |
1.03e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 41.45 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 176 VMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMNfyclILIKISLMTMMMAGISAFF 255
Cdd:MTH00070 96 IMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN----LLIIMGLLSTLIGGWGGLN 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 256 ETDFKKIIAFSTLSQLSMMMITISLgSMELAFFHLIMHAFFKSLLFLcagLVIHsfFGIQDIRMLGNFFKLSPFISTSMI 335
Cdd:MTH00070 172 QTQLRKIMAYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL---MLMN--LNSTNINKLSSSWSKNPTLTSMMM 245
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 49619221 336 ISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTFLYcLRMAYMM 391
Cdd:MTH00070 246 LTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFY-LRLSYAM 300
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
5-304 |
1.60e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 41.26 E-value: 1.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 5 WSIMLMFMVFIFSFVYIFSFYMNSIYIMeyyfnsiqnmdFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKNKIS 84
Cdd:MTH00014 23 WALTFSTLLLLSLFTLLNLYPMSAPYSM-----------FTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKT 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 85 FCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIY--YQSINSYNSGMMTIISNRVGDVMIILSLIFFVNFGSF 162
Cdd:MTH00014 92 FMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGwgYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 163 DLISLNK------IELICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMNFYCL 236
Cdd:MTH00014 172 SMLMSSMeppsiyLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHINKSL 251
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 49619221 237 --ILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMM---MITISLGSMELAFFHLIMHAFFKSLLFLCA 304
Cdd:MTH00014 252 saPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMtagIMSNTSWGWQGALAMMIAHGLCSSALFALA 324
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
85-305 |
1.68e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 41.23 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 85 FCFIVLLFVSSMIILILMPNMFMIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRVGDVMII---LSLIFFVNFGS 161
Cdd:PRK02546 117 FYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILlaaLAMAFYGDTPT 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 162 FDLISLN------KIELICGVMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLF---KMN 232
Cdd:PRK02546 197 FDMTALAakdfglGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMlpdAHA 276
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 49619221 233 FYCLILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITI----SLGsMELAFFHLIMHAFFKSLLFLCAG 305
Cdd:PRK02546 277 QFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIgsftDLG-TSGAMLQMISHGLIGASLFFLVG 352
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
185-442 |
1.70e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 41.20 E-value: 1.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 185 KSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFN---FLFKMNFYCLILIKISLMTMMMAGISAFFETDFKK 261
Cdd:MTH00204 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSwplFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 262 IIAFSTLSQLSMMMITISLGSME---LAFFHLIMHAFFKSLLFLcAGLVIHSFFGIQDIRMLGNFFKLSPFISTSMIISL 338
Cdd:MTH00204 302 LIAYSSVAHMGLVPLGLFTHTIEglvAAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLS 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 339 FSLMGFP----FIGGFYSKDLIVEFfffkinNIILFMIFILGILSTFLYCLRMAYMMLFKGIKNLILIKFNFDFFMKFSI 414
Cdd:MTH00204 381 LANMGFPlscnFVGEFFSLLAAFEY------SLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAI 454
|
250 260
....*....|....*....|....*...
gi 49619221 415 FVLCFFVLISGNFMFWLISSNLSAFFIS 442
Cdd:MTH00204 455 LPLIIAIFLLGIVPFIIIDLVKNSLVFS 482
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
170-305 |
2.01e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 40.79 E-value: 2.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 170 IELICGVMILIAAFTKSAQIPFSAWLPAAMA-APTPVSSLVhSSTLVTAGVYLLMRFNFLFKMN---FYCLILIKISLMT 245
Cdd:PRK12561 183 LELLLYAGFLIAFGVKLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVQMLPDahvYFAPALAILGVVN 261
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 49619221 246 MMMAGISAFFETDFKKIIAFSTLSQLSMMMITIS----LGsMELAFFHLIMHAFFKSLLFLCAG 305
Cdd:PRK12561 262 IIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAaftdLG-ISGAMLQMISHGLIAAALFFLTG 324
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
176-440 |
4.10e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 39.57 E-value: 4.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 176 VMILIAAFTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYLLMRFNFLFKMNfyclILIKISLMTMMMAGISAFF 255
Cdd:MTH00200 96 TLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSN----ILLLLGLLSVLVGGWGGLN 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 256 ETDFKKIIAFSTLSQLSMMMITISLGSMeLAFFHLIMHAFFKSLLFLcaglvIHSFFGIQDIRMLGNFFKLSPFISTSMI 335
Cdd:MTH00200 172 QTQLRKILAYSSIAHLGWLLSGLVYSPN-LALLYLLLYVIITLTVFL-----LLNLLNSTKINSLSSSKTKNPILSMLLG 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 336 ISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTFLYcLRMAYMMLFKGIKNLILIKFNFDFFMKFSIF 415
Cdd:MTH00200 246 LTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFY-LRLSYLTLLTLSPNQINMMSSWRTKSNSNLL 324
|
250 260
....*....|....*....|....*
gi 49619221 416 VLCFFVLisgNFMFWLISSNLSAFF 440
Cdd:MTH00200 325 VGLLLLL---SILGLPLTPQLLFLF 346
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
38-81 |
7.52e-03 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 34.71 E-value: 7.52e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 49619221 38 SIQNMDFKFYFLFDWMSILFSITVLMISSMVIMYSKSYMNEDKN 81
Cdd:pfam00662 3 SVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPG 46
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
237-383 |
8.07e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 38.76 E-value: 8.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 237 ILIKISLMTMMMAGISAFFETDFKKIIAFSTLSQLSMMMITiSLGSMELAFFHLIMHAFFKSLLFLcaglvIHSFFGIQD 316
Cdd:MTH00041 153 ILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIIT-SAYSPNASIIMFLIYIIINTSIFL-----IGNNFSLST 226
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 49619221 317 IRMLGNFFKLSPFISTSMIISLFSLMGFPFIGGFYSKDLIVEFFFFKINNIILFMIFILGILSTFLY 383
Cdd:MTH00041 227 LSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFY 293
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
185-353 |
9.96e-03 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 38.49 E-value: 9.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 185 KSAQIPFSAWLPAAM-AAPTPVSSLVhSSTLVTAGVYLLMRF---NFLFKMNFYCLILIKISLMTMMMAGISAFFETDFK 260
Cdd:PRK02504 223 KISAVPFHQWTPDVYeGSPTPVVAFL-SVGSKAAGFALAIRLlvtAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 49619221 261 KIIAFSTLSQLSMMMITISLGSME---LAFFHLIMHAFFKSLLFLCagLVIHSF-FGIQDIRMLGNFFKLSPFISTSMII 336
Cdd:PRK02504 302 RMLAYSSIGQAGFVMIGLVAGTEAgyaSMVFYLLAYLFMNLGAFAC--VILFSLrTGTDQISDYAGLYQKDPLLTLGLSL 379
|
170
....*....|....*..
gi 49619221 337 SLFSLMGFPFIGGFYSK 353
Cdd:PRK02504 380 CLLSLGGIPPLAGFFGK 396
|
|
| |
