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Conserved domains on  [gi|496082569|ref|WP_008807076|]
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MULTISPECIES: nuclear transport factor 2 family protein [Klebsiella]

Protein Classification

nuclear transport factor 2 family protein( domain architecture ID 10007626)

nuclear transport factor 2 (NTF2) family protein with a SnoaL-like polyketide cyclase domain

CATH:  3.10.450.50
SCOP:  4001306|3000472

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YesE COG3631
Ketosteroid isomerase-related protein [General function prediction only];
30-124 7.21e-16

Ketosteroid isomerase-related protein [General function prediction only];


:

Pssm-ID: 442849  Cd Length: 126  Bit Score: 68.80  E-value: 7.21e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496082569  30 YHPDATLSDPF----GQHQGLFAIQRYFTHLLANVEQCRFTIDTPLCDGQRFAVTWTMHWSHPriAGGETLALPGCSVVD 105
Cdd:COG3631   25 LAEDVVWEDPGgpgaGTYRGKEAVRAFFARLAAAFEDLRFEVRRVVADGDRVVVEGTVRGTVL--ATGKPYENRYADVFT 102

                         90
                 ....*....|....*....
gi 496082569 106 IAGEQILHQRDYYDAGEMI 124
Cdd:COG3631  103 VRDGKIVRVREYFDTAALA 121
 
Name Accession Description Interval E-value
YesE COG3631
Ketosteroid isomerase-related protein [General function prediction only];
30-124 7.21e-16

Ketosteroid isomerase-related protein [General function prediction only];


Pssm-ID: 442849  Cd Length: 126  Bit Score: 68.80  E-value: 7.21e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496082569  30 YHPDATLSDPF----GQHQGLFAIQRYFTHLLANVEQCRFTIDTPLCDGQRFAVTWTMHWSHPriAGGETLALPGCSVVD 105
Cdd:COG3631   25 LAEDVVWEDPGgpgaGTYRGKEAVRAFFARLAAAFEDLRFEVRRVVADGDRVVVEGTVRGTVL--ATGKPYENRYADVFT 102

                         90
                 ....*....|....*....
gi 496082569 106 IAGEQILHQRDYYDAGEMI 124
Cdd:COG3631  103 VRDGKIVRVREYFDTAALA 121
SnoaL_2 pfam12680
SnoaL-like domain; This family contains a large number of proteins that share the SnoaL fold.
 30-111 2.36e-14

SnoaL-like domain; This family contains a large number of proteins that share the SnoaL fold.


Pssm-ID: 432716 [Multi-domain]  Cd Length: 100  Bit Score: 64.23  E-value: 2.36e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496082569   30 YHPDATLSDPFGQHQGLFAIQRYFTHLLANVEQCRFTIDTPLCDGQRFAVTWTMHWSHPriAGGETLALPGCSVVDIAGE 109
Cdd:pfam12680  20 FAPDAVFHDPGGPLRGRDAIRAFFAALFAAFPDLRFEIHDVIADGDRVAVRWTVTGTIP--PTGRGVRVRGVDVFRFRDG 97


                  ..
gi 496082569  110 QI 111
Cdd:pfam12680  98 KI 99
 
Name Accession Description Interval E-value
YesE COG3631
Ketosteroid isomerase-related protein [General function prediction only];
30-124 7.21e-16

Ketosteroid isomerase-related protein [General function prediction only];


Pssm-ID: 442849  Cd Length: 126  Bit Score: 68.80  E-value: 7.21e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496082569  30 YHPDATLSDPF----GQHQGLFAIQRYFTHLLANVEQCRFTIDTPLCDGQRFAVTWTMHWSHPriAGGETLALPGCSVVD 105
Cdd:COG3631   25 LAEDVVWEDPGgpgaGTYRGKEAVRAFFARLAAAFEDLRFEVRRVVADGDRVVVEGTVRGTVL--ATGKPYENRYADVFT 102

                         90
                 ....*....|....*....
gi 496082569 106 IAGEQILHQRDYYDAGEMI 124
Cdd:COG3631  103 VRDGKIVRVREYFDTAALA 121
SnoaL_2 pfam12680
SnoaL-like domain; This family contains a large number of proteins that share the SnoaL fold.
 30-111 2.36e-14

SnoaL-like domain; This family contains a large number of proteins that share the SnoaL fold.


Pssm-ID: 432716 [Multi-domain]  Cd Length: 100  Bit Score: 64.23  E-value: 2.36e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496082569   30 YHPDATLSDPFGQHQGLFAIQRYFTHLLANVEQCRFTIDTPLCDGQRFAVTWTMHWSHPriAGGETLALPGCSVVDIAGE 109
Cdd:pfam12680  20 FAPDAVFHDPGGPLRGRDAIRAFFAALFAAFPDLRFEIHDVIADGDRVAVRWTVTGTIP--PTGRGVRVRGVDVFRFRDG 97


                  ..
gi 496082569  110 QI 111
Cdd:pfam12680  98 KI 99
NTF2 pfam02136
Nuclear transport factor 2 (NTF2) domain; This family includes the NTF2-like ...
 7-85 5.03e-05

Nuclear transport factor 2 (NTF2) domain; This family includes the NTF2-like Delta-5-3-ketosteroid isomerase proteins.


Pssm-ID: 396625  Cd Length: 116  Bit Score: 40.03  E-value: 5.03e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 496082569    7 VIRRFVE-YYAGLDAQPPAALAALYHPDATLSDPFG--QHQGLFAIQRYFTHLLANveQCRFTIDTplCDGQRFAVTWTM 83
Cdd:pfam02136   1 VGNAFVQqYYAALDAHDPEGLHALYADDASMLTPPGsdPVVGLEAINEFFDSLPFT--RIQHKITS--VDSQPASLKDGV 76


                  ..
gi 496082569   84 HW 85
Cdd:pfam02136  77 LV 78
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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