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Conserved domains on  [gi|492596255|ref|WP_005898549|]
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MULTISPECIES: SemiSWEET family transporter [Fusobacterium]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SWEET super family cl46783
Sugar transporter, SemiSWEET family, contains PQ motif [Carbohydrate transport and metabolism]; ...
 8-79 3.88e-03

Sugar transporter, SemiSWEET family, contains PQ motif [Carbohydrate transport and metabolism];


The actual alignment was detected with superfamily member COG4095:

Pssm-ID: 481123  Cd Length: 83  Bit Score: 32.85  E-value: 3.88e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 492596255  8 IIGWIGTTLAILMYVSYIPQIIGNLNGNKT---SFIQPLVAAINCIVWVCYGLFKkdRDLPLVFANLPGIIFGLI 79
Cdd:COG4095   2 LIEIIGLLAGILTTISFLPQVIKTWKTKSTkdiSLGMYLIFTTGVALWLIYGILI--GDLPIILANAITLVLALI 74
 
Name Accession Description Interval E-value
SWEET COG4095
Sugar transporter, SemiSWEET family, contains PQ motif [Carbohydrate transport and metabolism]; ...
 8-79 3.88e-03

Sugar transporter, SemiSWEET family, contains PQ motif [Carbohydrate transport and metabolism];


Pssm-ID: 443271  Cd Length: 83  Bit Score: 32.85  E-value: 3.88e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 492596255  8 IIGWIGTTLAILMYVSYIPQIIGNLNGNKT---SFIQPLVAAINCIVWVCYGLFKkdRDLPLVFANLPGIIFGLI 79
Cdd:COG4095   2 LIEIIGLLAGILTTISFLPQVIKTWKTKSTkdiSLGMYLIFTTGVALWLIYGILI--GDLPIILANAITLVLALI 74
 
Name Accession Description Interval E-value
SWEET COG4095
Sugar transporter, SemiSWEET family, contains PQ motif [Carbohydrate transport and metabolism]; ...
 8-79 3.88e-03

Sugar transporter, SemiSWEET family, contains PQ motif [Carbohydrate transport and metabolism];


Pssm-ID: 443271  Cd Length: 83  Bit Score: 32.85  E-value: 3.88e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 492596255  8 IIGWIGTTLAILMYVSYIPQIIGNLNGNKT---SFIQPLVAAINCIVWVCYGLFKkdRDLPLVFANLPGIIFGLI 79
Cdd:COG4095   2 LIEIIGLLAGILTTISFLPQVIKTWKTKSTkdiSLGMYLIFTTGVALWLIYGILI--GDLPIILANAITLVLALI 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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