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MULTISPECIES: phage minor head protein [Bacteroidales]
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
COG2369 | COG2369 | Uncharacterized protein, contains phage Mu head morphogenesis gpF-like domain [Mobilome: ... |
95-204 | 2.53e-25 | |||
Uncharacterized protein, contains phage Mu head morphogenesis gpF-like domain [Mobilome: prophages, transposons]; : Pssm-ID: 441936 [Multi-domain] Cd Length: 201 Bit Score: 102.03 E-value: 2.53e-25
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LPD3 | pfam18798 | Large polyvalent protein-associated domain 3; This domain is predicted to adopt an alpha and ... |
284-381 | 1.74e-12 | |||
Large polyvalent protein-associated domain 3; This domain is predicted to adopt an alpha and beta fold. The secondary structure arrangement suggests it to be a member of the BECR fold. The domain is found in polyvalent proteins of both conjugative elements and phages/prophages. : Pssm-ID: 436745 Cd Length: 110 Bit Score: 63.49 E-value: 1.74e-12
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Name | Accession | Description | Interval | E-value | |||
COG2369 | COG2369 | Uncharacterized protein, contains phage Mu head morphogenesis gpF-like domain [Mobilome: ... |
95-204 | 2.53e-25 | |||
Uncharacterized protein, contains phage Mu head morphogenesis gpF-like domain [Mobilome: prophages, transposons]; Pssm-ID: 441936 [Multi-domain] Cd Length: 201 Bit Score: 102.03 E-value: 2.53e-25
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Phage_Mu_F | pfam04233 | Phage Mu protein F like protein; Members of this family are found in double-stranded DNA ... |
122-195 | 5.68e-13 | |||
Phage Mu protein F like protein; Members of this family are found in double-stranded DNA bacteriophages, and in some bacteria. A member of this family is required for viral head morphogenesis in bacteriophage SPP1. This family is possibly a minor head protein. This family may be related to the family TT_ORF1 (pfam02956). Pssm-ID: 309383 Cd Length: 110 Bit Score: 64.71 E-value: 5.68e-13
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LPD3 | pfam18798 | Large polyvalent protein-associated domain 3; This domain is predicted to adopt an alpha and ... |
284-381 | 1.74e-12 | |||
Large polyvalent protein-associated domain 3; This domain is predicted to adopt an alpha and beta fold. The secondary structure arrangement suggests it to be a member of the BECR fold. The domain is found in polyvalent proteins of both conjugative elements and phages/prophages. Pssm-ID: 436745 Cd Length: 110 Bit Score: 63.49 E-value: 1.74e-12
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phageSPP1_gp7 | TIGR01641 | phage putative head morphogenesis protein, SPP1 gp7 family; This model describes a region of ... |
121-198 | 4.70e-10 | |||
phage putative head morphogenesis protein, SPP1 gp7 family; This model describes a region of about 110 amino acids found exclusively in phage-related proteins, internally or toward the C-terminus. One member, gp7 of phage SPP1, appears involved in head morphogenesis. [Mobile and extrachromosomal element functions, Prophage functions] Pssm-ID: 213641 Cd Length: 108 Bit Score: 56.62 E-value: 4.70e-10
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Name | Accession | Description | Interval | E-value | |||
COG2369 | COG2369 | Uncharacterized protein, contains phage Mu head morphogenesis gpF-like domain [Mobilome: ... |
95-204 | 2.53e-25 | |||
Uncharacterized protein, contains phage Mu head morphogenesis gpF-like domain [Mobilome: prophages, transposons]; Pssm-ID: 441936 [Multi-domain] Cd Length: 201 Bit Score: 102.03 E-value: 2.53e-25
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Phage_Mu_F | pfam04233 | Phage Mu protein F like protein; Members of this family are found in double-stranded DNA ... |
122-195 | 5.68e-13 | |||
Phage Mu protein F like protein; Members of this family are found in double-stranded DNA bacteriophages, and in some bacteria. A member of this family is required for viral head morphogenesis in bacteriophage SPP1. This family is possibly a minor head protein. This family may be related to the family TT_ORF1 (pfam02956). Pssm-ID: 309383 Cd Length: 110 Bit Score: 64.71 E-value: 5.68e-13
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LPD3 | pfam18798 | Large polyvalent protein-associated domain 3; This domain is predicted to adopt an alpha and ... |
284-381 | 1.74e-12 | |||
Large polyvalent protein-associated domain 3; This domain is predicted to adopt an alpha and beta fold. The secondary structure arrangement suggests it to be a member of the BECR fold. The domain is found in polyvalent proteins of both conjugative elements and phages/prophages. Pssm-ID: 436745 Cd Length: 110 Bit Score: 63.49 E-value: 1.74e-12
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phageSPP1_gp7 | TIGR01641 | phage putative head morphogenesis protein, SPP1 gp7 family; This model describes a region of ... |
121-198 | 4.70e-10 | |||
phage putative head morphogenesis protein, SPP1 gp7 family; This model describes a region of about 110 amino acids found exclusively in phage-related proteins, internally or toward the C-terminus. One member, gp7 of phage SPP1, appears involved in head morphogenesis. [Mobile and extrachromosomal element functions, Prophage functions] Pssm-ID: 213641 Cd Length: 108 Bit Score: 56.62 E-value: 4.70e-10
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Blast search parameters | ||||
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