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Conserved domains on  [gi|489996657|ref|WP_003899668|]
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DUF2237 family protein [Mycobacterium tuberculosis]

Protein Classification

DUF2237 family protein( domain architecture ID 10165)

DUF2237 family protein similar to Thermosynechococcus elongatus Tll1086 protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2237 super family cl01467
Uncharacterized protein conserved in bacteria (DUF2237); This domain, found in various ...
 5-64 2.07e-36

Uncharacterized protein conserved in bacteria (DUF2237); This domain, found in various hypothetical bacterial proteins, has no known function.


The actual alignment was detected with superfamily member COG3651:

Pssm-ID: 470217  Cd Length: 124  Bit Score: 117.94  E-value: 2.07e-36
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 489996657   5 NVLGGALEQGGTDPLTGFYRDGCCATGPEDLGWHTICAVMTTEFLAHQRSVGNDLSIARP 64
Cdd:COG3651    8 NVLGEPLEPCSTDPLTGFYRDGCCNTGPEDLGSHTVCAVMTAEFLAFSKARGNDLSTPRP 67
 
Name Accession Description Interval E-value
COG3651 COG3651
Uncharacterized conserved protein, DUF2237 family [Function unknown];
5-64 2.07e-36

Uncharacterized conserved protein, DUF2237 family [Function unknown];


Pssm-ID: 442868  Cd Length: 124  Bit Score: 117.94  E-value: 2.07e-36
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 489996657   5 NVLGGALEQGGTDPLTGFYRDGCCATGPEDLGWHTICAVMTTEFLAHQRSVGNDLSIARP 64
Cdd:COG3651    8 NVLGEPLEPCSTDPLTGFYRDGCCNTGPEDLGSHTVCAVMTAEFLAFSKARGNDLSTPRP 67
DUF2237 pfam09996
Uncharacterized protein conserved in bacteria (DUF2237); This domain, found in various ...
 5-64 7.42e-35

Uncharacterized protein conserved in bacteria (DUF2237); This domain, found in various hypothetical bacterial proteins, has no known function.


Pssm-ID: 462939  Cd Length: 108  Bit Score: 113.74  E-value: 7.42e-35
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 489996657    5 NVLGGALEQGGTDPLTGFYRDGCCATGPEDLGWHTICAVMTTEFLAHQRSVGNDLSIARP 64
Cdd:pfam09996   2 NVLGGPLEPCSTDPLTGFYRDGCCRTGPEDLGSHTVCAVVTEEFLEFSKSQGNDLSTPRP 61
 
Name Accession Description Interval E-value
COG3651 COG3651
Uncharacterized conserved protein, DUF2237 family [Function unknown];
5-64 2.07e-36

Uncharacterized conserved protein, DUF2237 family [Function unknown];


Pssm-ID: 442868  Cd Length: 124  Bit Score: 117.94  E-value: 2.07e-36
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 489996657   5 NVLGGALEQGGTDPLTGFYRDGCCATGPEDLGWHTICAVMTTEFLAHQRSVGNDLSIARP 64
Cdd:COG3651    8 NVLGEPLEPCSTDPLTGFYRDGCCNTGPEDLGSHTVCAVMTAEFLAFSKARGNDLSTPRP 67
DUF2237 pfam09996
Uncharacterized protein conserved in bacteria (DUF2237); This domain, found in various ...
 5-64 7.42e-35

Uncharacterized protein conserved in bacteria (DUF2237); This domain, found in various hypothetical bacterial proteins, has no known function.


Pssm-ID: 462939  Cd Length: 108  Bit Score: 113.74  E-value: 7.42e-35
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 489996657    5 NVLGGALEQGGTDPLTGFYRDGCCATGPEDLGWHTICAVMTTEFLAHQRSVGNDLSIARP 64
Cdd:pfam09996   2 NVLGGPLEPCSTDPLTGFYRDGCCRTGPEDLGSHTVCAVVTEEFLEFSKSQGNDLSTPRP 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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