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Conserved domains on  [gi|489956389|ref|WP_003859696|]
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MULTISPECIES: flagellar motor stator protein MotA [Enterobacter]

Protein Classification

flagellar motor stator protein MotA( domain architecture ID 10013143)

motility protein A (MotA) is a flagellar motor stator protein which is energized by a proton (H(+)) motive force

Gene Symbol:  motA
Gene Ontology:  GO:0120101|GO:1902600|GO:0006935
PubMed:  6090403|32931735

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK09110 PRK09110
flagellar motor stator protein MotA;
1-283 0e+00

flagellar motor stator protein MotA;


:

Pssm-ID: 181655 [Multi-domain]  Cd Length: 283  Bit Score: 503.54  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389   1 MLILLGYLVVLGTVFGGYMMTGGHLGALYQPAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKSMYMDLLA 80
Cdd:PRK09110   1 MLIIIGYIVVLGSVFGGYLLAGGHLGALIQPAELLIIGGAALGAFIVGNPGKAIKATLKALPKLFKGPKYKKADYMDLLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389  81 LLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAMMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESESEV 160
Cdd:PRK09110  81 LLYELLRKARQEGMMALEAHIENPEESPIFAKYPKILKDHHLVDFICDYLRLMISGNMNPHEIEALMDEEIETHHHEAEV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389 161 PANSLALVGDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQC 240
Cdd:PRK09110 161 PAHALQKVADALPAFGIVAAVLGVVKTMGSIDQPPAVLGALIGAALVGTFLGILLAYGFVGPLAARLEQVVEEDTKMYQC 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 489956389 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAV 283
Cdd:PRK09110 241 IKVTLLASLNGYAPQIAVEFGRKTLPSTERPSFAELEEHVRGV 283
 
Name Accession Description Interval E-value
PRK09110 PRK09110
flagellar motor stator protein MotA;
1-283 0e+00

flagellar motor stator protein MotA;


Pssm-ID: 181655 [Multi-domain]  Cd Length: 283  Bit Score: 503.54  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389   1 MLILLGYLVVLGTVFGGYMMTGGHLGALYQPAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKSMYMDLLA 80
Cdd:PRK09110   1 MLIIIGYIVVLGSVFGGYLLAGGHLGALIQPAELLIIGGAALGAFIVGNPGKAIKATLKALPKLFKGPKYKKADYMDLLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389  81 LLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAMMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESESEV 160
Cdd:PRK09110  81 LLYELLRKARQEGMMALEAHIENPEESPIFAKYPKILKDHHLVDFICDYLRLMISGNMNPHEIEALMDEEIETHHHEAEV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389 161 PANSLALVGDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQC 240
Cdd:PRK09110 161 PAHALQKVADALPAFGIVAAVLGVVKTMGSIDQPPAVLGALIGAALVGTFLGILLAYGFVGPLAARLEQVVEEDTKMYQC 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 489956389 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAV 283
Cdd:PRK09110 241 IKVTLLASLNGYAPQIAVEFGRKTLPSTERPSFAELEEHVRGV 283
MotA1 TIGR03818
flagellar motor stator protein MotA; The MotA protein, along with its partner MotB, comprise ...
 1-282 8.51e-159

flagellar motor stator protein MotA; The MotA protein, along with its partner MotB, comprise the stator complex of the bacterial flagellar motor. MotAB span the cytoplasmic membrane and undergo conformational changes powered by the translocation of protons. These conformational changes in turn are communicated to the rotor assembly, producing torque. This model represents one family of MotA proteins which are often not identified by the "transporter, MotA/TolQ/ExbB proton channel family" model, pfam01618.


Pssm-ID: 274801 [Multi-domain]  Cd Length: 282  Bit Score: 443.49  E-value: 8.51e-159
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389    1 MLILLGYLVVLGTVFGGYMMTGGHLGALYQPAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKSMYMDLLA 80
Cdd:TIGR03818   1 MLKIIGLVVVLGSVFGGYALAGGHLAALWQPAELLIIGGAALGAFIIANPPKVLKETLKGLPAVFKGSKYGKADYLDLLS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389   81 LLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAMMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESESEV 160
Cdd:TIGR03818  81 LLYELLRKARREGLMAIESHIENPEESSIFSKYPKILKDHHLVEFICDYLRLMVMGNMNPHELEALMEEEIETHHHELLK 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389  161 PANSLALVGDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQC 240
Cdd:TIGR03818 161 PAHALQKVADALPGFGIVAAVLGVVITMGSIDGPPEVLGHHIAAALVGTFLGILLCYGFVGPLAAALEQRVEEEIKFLEC 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 489956389  241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRA 282
Cdd:TIGR03818 241 VKVVLVAFLNGYAPQLAVEFGRKVIPSDVRPSFAELEEWVRG 282
MotA COG1291
Flagellar motor component MotA [Cell motility];
1-275 9.24e-98

Flagellar motor component MotA [Cell motility];


Pssm-ID: 440902 [Multi-domain]  Cd Length: 258  Bit Score: 287.74  E-value: 9.24e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389   1 MLILLGYLVVLGTVFGGYMMTGGHLGALYQPAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYtksMYMDLLA 80
Cdd:COG1291    1 MATIIGLVVGLGAVLGGFLLEGGSLGALIQPPSLLIVFGGTLGAVLISFPLKVLKAALKALKKAFKGKKA---DYEELIE 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389  81 LLYRLMAKSRQQGMFSLERDIENPKEseifasypriladammlDFIVDYLRLIISGnMNTFEIEALMDEEIETHESESEV 160
Cdd:COG1291   78 LLVELAEKARKEGLLALESDIEEIDD-----------------PFLRDGLRLVVDG-TDPEEIRELLETEIEAMEERHEA 139

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389 161 PANSLALVGDSLPAFGIVAAVMGVVHALASADRPAAeLGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQC 240
Cdd:COG1291  140 GAKVFEAMGDYAPAFGIIGTVLGLIQMLGNLDDPSA-LGPGIAVALVTTFYGVLLANLFFLPIANKLKRRSEEEVLLREM 218

                        250       260       270
                 ....*....|....*....|....*....|....*
gi 489956389 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIE 275
Cdd:COG1291  219 IIEGLLAIQAGENPRIIEEKLRSFLPPSERPSFEE 253
MotA_N pfam20560
Motility protein A N-terminal; This entry represents the N-terminal domain of Motility protein ...
 4-93 2.74e-42

Motility protein A N-terminal; This entry represents the N-terminal domain of Motility protein A (MotA). MotA is a membrane protein that forms the stator element of the flagellar motor complex together with MotB with 5:2 stoichiometry, which couples ion flow across the cytoplasmic membrane to generate torque, and thus, it is required for rotation of the flagellar motor. This domain contains conserved torque-generating charged residues at the C-terminal and is adjacent pfam01618, which represents MotA TMH3 and TMH4.


Pssm-ID: 466709 [Multi-domain]  Cd Length: 91  Bit Score: 140.61  E-value: 2.74e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389    4 LLGYLVVLGTVFGGYMMTGGHLGALYQ-PAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKSMYMDLLALL 82
Cdd:pfam20560   1 IIGIVVVLGCVFGGYALAGGHLGVLWQlPFELLIIGGAAIGAFIIANPMKVLKATLKALPKAFKGSKYKKADYLDLLALL 80

                          90
                  ....*....|.
gi 489956389   83 YRLMAKSRQQG 93
Cdd:pfam20560  81 YELLRKARKEG 91
MFS_SpdSyn NF037959
fused MFS/spermidine synthase; Proteins of this family are fusion of a N-terminal MFS (Major ...
 172-227 3.26e-03

fused MFS/spermidine synthase; Proteins of this family are fusion of a N-terminal MFS (Major Facilitator Superfamily) transporter domain and a C-terminal spermidine synthase (SpdSyn)-like domain. The encoding genes usually near the genes encoding S-adenosylmethionine decarboxylase (AdoMetDC) on many bacterial genomes. It has been shown in Shewanella oneidensis that the fused protein aminopropylates a substrate other than putrescine, and has a role outside of polyamine biosynthesis.


Pssm-ID: 468290 [Multi-domain]  Cd Length: 480  Bit Score: 38.67  E-value: 3.26e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 489956389 172 LPAF--GIVAAVMGVVhALASADRPAAELGALIAHAMVGTFLGILLA-YGFISPLASVL 227
Cdd:NF037959 105 LPSLfaGVPAPVLTQL-AVRGAERSGRALGAMFAAGAIGAIAGTLLAgFLFISWLGSAG 162
 
Name Accession Description Interval E-value
PRK09110 PRK09110
flagellar motor stator protein MotA;
1-283 0e+00

flagellar motor stator protein MotA;


Pssm-ID: 181655 [Multi-domain]  Cd Length: 283  Bit Score: 503.54  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389   1 MLILLGYLVVLGTVFGGYMMTGGHLGALYQPAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKSMYMDLLA 80
Cdd:PRK09110   1 MLIIIGYIVVLGSVFGGYLLAGGHLGALIQPAELLIIGGAALGAFIVGNPGKAIKATLKALPKLFKGPKYKKADYMDLLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389  81 LLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAMMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESESEV 160
Cdd:PRK09110  81 LLYELLRKARQEGMMALEAHIENPEESPIFAKYPKILKDHHLVDFICDYLRLMISGNMNPHEIEALMDEEIETHHHEAEV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389 161 PANSLALVGDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQC 240
Cdd:PRK09110 161 PAHALQKVADALPAFGIVAAVLGVVKTMGSIDQPPAVLGALIGAALVGTFLGILLAYGFVGPLAARLEQVVEEDTKMYQC 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 489956389 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAV 283
Cdd:PRK09110 241 IKVTLLASLNGYAPQIAVEFGRKTLPSTERPSFAELEEHVRGV 283
MotA1 TIGR03818
flagellar motor stator protein MotA; The MotA protein, along with its partner MotB, comprise ...
 1-282 8.51e-159

flagellar motor stator protein MotA; The MotA protein, along with its partner MotB, comprise the stator complex of the bacterial flagellar motor. MotAB span the cytoplasmic membrane and undergo conformational changes powered by the translocation of protons. These conformational changes in turn are communicated to the rotor assembly, producing torque. This model represents one family of MotA proteins which are often not identified by the "transporter, MotA/TolQ/ExbB proton channel family" model, pfam01618.


Pssm-ID: 274801 [Multi-domain]  Cd Length: 282  Bit Score: 443.49  E-value: 8.51e-159
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389    1 MLILLGYLVVLGTVFGGYMMTGGHLGALYQPAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKSMYMDLLA 80
Cdd:TIGR03818   1 MLKIIGLVVVLGSVFGGYALAGGHLAALWQPAELLIIGGAALGAFIIANPPKVLKETLKGLPAVFKGSKYGKADYLDLLS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389   81 LLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAMMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESESEV 160
Cdd:TIGR03818  81 LLYELLRKARREGLMAIESHIENPEESSIFSKYPKILKDHHLVEFICDYLRLMVMGNMNPHELEALMEEEIETHHHELLK 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389  161 PANSLALVGDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQC 240
Cdd:TIGR03818 161 PAHALQKVADALPGFGIVAAVLGVVITMGSIDGPPEVLGHHIAAALVGTFLGILLCYGFVGPLAAALEQRVEEEIKFLEC 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 489956389  241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRA 282
Cdd:TIGR03818 241 VKVVLVAFLNGYAPQLAVEFGRKVIPSDVRPSFAELEEWVRG 282
MotA COG1291
Flagellar motor component MotA [Cell motility];
1-275 9.24e-98

Flagellar motor component MotA [Cell motility];


Pssm-ID: 440902 [Multi-domain]  Cd Length: 258  Bit Score: 287.74  E-value: 9.24e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389   1 MLILLGYLVVLGTVFGGYMMTGGHLGALYQPAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYtksMYMDLLA 80
Cdd:COG1291    1 MATIIGLVVGLGAVLGGFLLEGGSLGALIQPPSLLIVFGGTLGAVLISFPLKVLKAALKALKKAFKGKKA---DYEELIE 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389  81 LLYRLMAKSRQQGMFSLERDIENPKEseifasypriladammlDFIVDYLRLIISGnMNTFEIEALMDEEIETHESESEV 160
Cdd:COG1291   78 LLVELAEKARKEGLLALESDIEEIDD-----------------PFLRDGLRLVVDG-TDPEEIRELLETEIEAMEERHEA 139

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389 161 PANSLALVGDSLPAFGIVAAVMGVVHALASADRPAAeLGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQC 240
Cdd:COG1291  140 GAKVFEAMGDYAPAFGIIGTVLGLIQMLGNLDDPSA-LGPGIAVALVTTFYGVLLANLFFLPIANKLKRRSEEEVLLREM 218

                        250       260       270
                 ....*....|....*....|....*....|....*
gi 489956389 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIE 275
Cdd:COG1291  219 IIEGLLAIQAGENPRIIEEKLRSFLPPSERPSFEE 253
PRK12482 PRK12482
flagellar motor stator protein MotA;
1-283 3.12e-75

flagellar motor stator protein MotA;


Pssm-ID: 171532 [Multi-domain]  Cd Length: 287  Bit Score: 231.56  E-value: 3.12e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389   1 MLILLGYLVVLGTVFGGYMMTGGHLGALYQPAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKSMYMDLLA 80
Cdd:PRK12482   1 MQKLFGLLVVMGCVFGGYLMSGGSLSSIWQPGEIIIILGAGIGAMILGNPKSVLKEMWHQIKGVIRRKEYGVEFQRQLLL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389  81 LLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAMMLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESESEV 160
Cdd:PRK12482  81 LLYELLEMVQEGGLKRLDQHIEIPEESSLFQKYPLILQQKRLITFISDNFRLMAMGKINQHELEGILDQELDAVEEELLQ 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389 161 PANSLALVGDSLPAFGIVAAVMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQC 240
Cdd:PRK12482 161 PSRSLQRIAEAMPGFGICAAVLGIIITMQSIDGSIAEIGLKVAAALVGTFLGVFICYCLMDPLANAMEQEIKKELSLLEC 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 489956389 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAV 283
Cdd:PRK12482 241 VRTVLVAHVAGKPTLLAVDAGRKLLPLDNKPTFATLDSWINAM 283
MotA_N pfam20560
Motility protein A N-terminal; This entry represents the N-terminal domain of Motility protein ...
 4-93 2.74e-42

Motility protein A N-terminal; This entry represents the N-terminal domain of Motility protein A (MotA). MotA is a membrane protein that forms the stator element of the flagellar motor complex together with MotB with 5:2 stoichiometry, which couples ion flow across the cytoplasmic membrane to generate torque, and thus, it is required for rotation of the flagellar motor. This domain contains conserved torque-generating charged residues at the C-terminal and is adjacent pfam01618, which represents MotA TMH3 and TMH4.


Pssm-ID: 466709 [Multi-domain]  Cd Length: 91  Bit Score: 140.61  E-value: 2.74e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389    4 LLGYLVVLGTVFGGYMMTGGHLGALYQ-PAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKSMYMDLLALL 82
Cdd:pfam20560   1 IIGIVVVLGCVFGGYALAGGHLGVLWQlPFELLIIGGAAIGAFIIANPMKVLKATLKALPKAFKGSKYKKADYLDLLALL 80

                          90
                  ....*....|.
gi 489956389   83 YRLMAKSRQQG 93
Cdd:pfam20560  81 YELLRKARKEG 91
PRK08124 PRK08124
flagellar motor protein MotA; Validated
 4-278 5.61e-21

flagellar motor protein MotA; Validated


Pssm-ID: 181238 [Multi-domain]  Cd Length: 263  Bit Score: 89.63  E-value: 5.61e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389   4 LLGYLVVLGTVFGGYMMTGGHLGALYQPAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKsmYMDLLALLY 83
Cdd:PRK08124   6 IIGLILGLIAVVVGMVVKGASLAVLLNPAAILIIIVGTIAAVMIAFPMSELKKVPKLFKVLFKEKKDPS--KEELIEQFV 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389  84 RLMAKSRQQGMFSLER---DIENPkeseifasypriladammldFIVDYLRLIISGNMNTFeIEALMDEEIETHESESEV 160
Cdd:PRK08124  84 EWASESRREGLLALEAqldEIDDP--------------------FLKRGLKMVIDGQSPEF-IRDVLEEEIEAMEERHAA 142

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389 161 PANSLALVGDSLPAFGIVAAVMGVVHALASADRPAAeLGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQC 240
Cdd:PRK08124 143 GAAIFTQAGTYAPTLGVLGAVIGLIAALGNLSDIEK-LGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEIELKYI 221

                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 489956389 241 VKITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEE 278
Cdd:PRK08124 222 IIEGVLAIQEGNAPRVIEEKLLGYLSPKERKKLEEGAE 259
motC PRK09109
flagellar motor protein; Reviewed
 2-228 1.26e-14

flagellar motor protein; Reviewed


Pssm-ID: 181654 [Multi-domain]  Cd Length: 246  Bit Score: 71.90  E-value: 1.26e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389   2 LILLGYLVVLGTVFGGYMMTGGHLGALYQPAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFrrskytKSMYMDLLAL 81
Cdd:PRK09109   4 LSLIGLILAFVAIIGGQVLEGGHLGSLLNGPAFLIVIGGTLGAVLLQTPLAVFKRAFKILRWVF------FPPRSDLEGG 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389  82 LYRLM---AKSRQQGMFSLERDIENPKESeifasypriladammldFIVDYLRLIISGNmNTFEIEALMDEEIETHESES 158
Cdd:PRK09109  78 IDRIVewsNTARKEGLLGLEDVADREPDP-----------------FARKGLQLLVDGA-EPESIRSVLEVEIDTQEHRD 139

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389 159 EVPANSLALVGDSLPAFGIVAAVMGVVHALASADRPAaELGALIAHAMVGTFLGILLAYGFISPLASVLR 228
Cdd:PRK09109 140 LQAAKVFESMGGYAPTIGIIGAVMGLIHVMENLADPS-QLGSGIAVAFVATIYGVASANLLFLPVANKLK 208
PRK08456 PRK08456
flagellar motor protein MotA; Validated
 4-254 7.91e-14

flagellar motor protein MotA; Validated


Pssm-ID: 181434 [Multi-domain]  Cd Length: 257  Bit Score: 69.75  E-value: 7.91e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389   4 LLGYLVVLGTVFGGYMMTGGH-LGALYQPAELVIIGGAGVGAfIVGNNGKSIKGTLKAIPLLFRRSKYTKSmymDLLALL 82
Cdd:PRK08456   6 ILGMVLAVASISVGDILEGGNpLHVIHLSSFIIVVPTALFAA-MTATHKKYVKAAYKELKIVFKNPGVNLN---ERIKQL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389  83 YRLMAKSRQQGMFSLERDIENPKEseifasypriladammlDFIVDYLRLIISGnMNTFEIEALMDEEIETHESESEVPA 162
Cdd:PRK08456  82 VELATLARKDGVLALEGRVAQIED-----------------EFLKNGLSMLVDG-KDLEEIKESMEIQIEEMEEYYHGAA 143

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389 163 NSLALVGDSLPAFGIVAAVMGVVHALASADRPaAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQCVK 242
Cdd:PRK08456 144 HYWITAGETCPTMGLVGAVMGLMLALQKLDNP-AEMAAGIAGAFTATVTGIMGSYALFGPWGHKLKAKSKDIIKEKTVIL 222

                        250
                 ....*....|..
gi 489956389 243 ITLLSNLNGYAP 254
Cdd:PRK08456 223 EGILGIAEGANP 234
PRK06743 PRK06743
flagellar motor protein MotP; Reviewed
 5-224 2.50e-07

flagellar motor protein MotP; Reviewed


Pssm-ID: 136027  Cd Length: 254  Bit Score: 50.74  E-value: 2.50e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389   5 LGYLVVLGTVFGGYMMTGGHLGAL---YQPAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKSMYMDLLAL 81
Cdd:PRK06743   1 VGIIVGFAIVIAAIMLGGGGIKAFknfLDVSSILIVIGGTTATIVVAYRFGEIKKYTKSIFTVLHRREEDLEQLTDLFVD 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389  82 LYRlmaKSRQQGMFSLERD---IENPkeseifasypriladammldFIVDYLRLIISGnMNTFEIEALMDEEIETHESES 158
Cdd:PRK06743  81 FSK---KSKKHGLLSLEVDgeqVDNP--------------------FIQKGIRLMLSG-YDEDELKEVLMKDVETEVYEL 136

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489956389 159 EVPANSLALVGDSLPAFGIVAAVMGVVHALASAdRPAAELGALIAHAMVGTFLGILLAYGFISPLA 224
Cdd:PRK06743 137 RKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNL-QDTSQIGTGMAVAMLTTLYGSVLANMIAIPLA 201
PRK06926 PRK06926
flagellar motor protein MotP; Reviewed
 3-233 1.48e-06

flagellar motor protein MotP; Reviewed


Pssm-ID: 180755 [Multi-domain]  Cd Length: 271  Bit Score: 48.56  E-value: 1.48e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389   3 ILLGYLVVLGTVFGGYMMTGghLGALYQPAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKSmymDLLALL 82
Cdd:PRK06926  12 IFLGITIVVLGVISNSGLSG--FLSFIDLTSILIVTGGLCAALFISFSPKDLKLAPRVLKQAFQSQEDDVE---ELVQTF 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389  83 YRLMAKSRQQGMFSLE---RDIENPkeseifasypriladammldFIVDYLRLIISGnMNTFEIEALMDEEIETHESESE 159
Cdd:PRK06926  87 VSLSEKARREGLLSLEaelEEVKDP--------------------FIKKGLLLAIDG-WEPETIRDIMMAEIAAMEERHR 145

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489956389 160 VPANSLALVGDSLPAFGIVAAVMGVVHALASADRPAAeLGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAE 233
Cdd:PRK06926 146 KGRRIFEKAGEYAPAWGMIGTLVGLVLMLKNLNDPST-LGPNMAIALLTTLYGTLLANLVFLPIAAKLEEKTEE 218
MotA_ExbB pfam01618
MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins ...
 118-216 7.14e-05

MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.


Pssm-ID: 460268  Cd Length: 120  Bit Score: 41.69  E-value: 7.14e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489956389  118 ADAMMLDFIVDYLRLIISGNmNTFEIEALMDEEIETHESESEVPANSLALVGDSLPAFGIVAAVMGVVHA---LASADRP 194
Cdd:pfam01618   2 ANSPEDRFLKKGLQLVVDGT-DPEEIRRALEEAIDREEERLERGLSILATIGSLAPLLGLLGTVLGLIHAfqnLGDAGPG 80

                          90       100
                  ....*....|....*....|..
gi 489956389  195 AAELGALIAHAMVGTFLGILLA 216
Cdd:pfam01618  81 LSALAPGIAEALIATAYGLFVA 102
MFS_SpdSyn NF037959
fused MFS/spermidine synthase; Proteins of this family are fusion of a N-terminal MFS (Major ...
 172-227 3.26e-03

fused MFS/spermidine synthase; Proteins of this family are fusion of a N-terminal MFS (Major Facilitator Superfamily) transporter domain and a C-terminal spermidine synthase (SpdSyn)-like domain. The encoding genes usually near the genes encoding S-adenosylmethionine decarboxylase (AdoMetDC) on many bacterial genomes. It has been shown in Shewanella oneidensis that the fused protein aminopropylates a substrate other than putrescine, and has a role outside of polyamine biosynthesis.


Pssm-ID: 468290 [Multi-domain]  Cd Length: 480  Bit Score: 38.67  E-value: 3.26e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 489956389 172 LPAF--GIVAAVMGVVhALASADRPAAELGALIAHAMVGTFLGILLA-YGFISPLASVL 227
Cdd:NF037959 105 LPSLfaGVPAPVLTQL-AVRGAERSGRALGAMFAAGAIGAIAGTLLAgFLFISWLGSAG 162
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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