|
Name |
Accession |
Description |
Interval |
E-value |
| flgK |
PRK08147 |
flagellar hook-associated protein FlgK; Validated |
1-547 |
0e+00 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236165 [Multi-domain] Cd Length: 547 Bit Score: 912.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQT 80
Cdd:PRK08147 1 MSSLINTAMSGLNAAQAALNTVSNNISNYNVAGYTRQTTILAQAGSTLTAGGWIGNGVYVSGVQREYDAFITNQLRAAQT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 81 QSSGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNI 160
Cdd:PRK08147 81 QSSGLTTRYEQMSKIDNLLSDSTNSLSTTMQDFFTSLQTLVSNAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKGVNT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 161 AIGASVDQINNYAKQIASLNDQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGST 240
Cdd:PRK08147 161 AIGSSVDQINNYAKQIASLNDQITRLTGVGAGASPNDLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGST 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 241 ARQLAAVPSSADPSRTTVAYVDGTTGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDAN 320
Cdd:PRK08147 241 AYQLAAVPSSADPTRTTVAYVDGTAGNIEIPEKLLTTGSLGGLLTFRSQDLDQTRNQLGQLALAFADAFNTQHKAGFDAN 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 321 GDAGEDFFAIGKPAVLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVTRLASNTTFTVTPDANGK-VAFDGLEL 399
Cdd:PRK08147 321 GDAGEDFFSIGKPAVLSNSKNTGTASLTAEYTDASAVKATDYKISFDGTNWQVTRLSDNTTFTVTPDANGKtLEFDGLKV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 400 TFTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMASAEDAGDSDNRNGQALLDLQsNSKTVGGAKSFNDAYASLVSDI 479
Cdd:PRK08147 401 TVTGTPAANDSFTLKPVSDAIVNMDVLITDESKIAMASEADGGDSDNRNGQALLDLQ-NKKLVGGKKSFNDAYASLVSDV 479
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 486159210 480 GNKTATLKTSSTTQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR 547
Cdd:PRK08147 480 GNQTATLKTSSTTQANVVTQLTNQQQSVSGVNLDEEYGNLQRFQQYYLANAQVLQTASTLFDALLNIR 547
|
|
| flgK |
PRK06945 |
flagellar hook-associated protein FlgK; Validated |
1-547 |
1.36e-169 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 235895 [Multi-domain] Cd Length: 651 Bit Score: 495.31 E-value: 1.36e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQT 80
Cdd:PRK06945 1 SSSLLNIGLSGLNAAQWGLTTTGHNISNAATPGYSRQRVVQAEAGGQYTGSGYLGQGVNVVTVKRQYSQYLSAQLNNAQA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 81 QSSGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNI 160
Cdd:PRK06945 81 ASSSLSTYYSQISQLNNYLADPTAGLSPAITSFFTGLQNVANNPSDPSARQTMLSNAQTLASQFNAAGQQLDQLRQSVNT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 161 AIGASVDQINNYAKQIASLNDQISRLTGVGaGASPNNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGST 240
Cdd:PRK06945 161 QLTSSVTQINSYTKQIAQLNDQIAKAESSQ-GQPPNDLLDQRDQLVSELSKLVGVTVVQQDDGGYNVFVGNGQPLVVGNQ 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 241 ARQLAAVPSSADPSRTTVAYVDGTTGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDAN 320
Cdd:PRK06945 240 SYQLTTVPSPSDPSRLTVAGYKPPGTTQELPDSSLTGGTLGGLLAFRSQTLDPAQNQLGRLAASLAAQFNAQNALGIDLN 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 321 GDAGEDFFAIGKPAVLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVTRLASNTTFTVTPDANGKVAF--DGLE 398
Cdd:PRK06945 320 GNLGGDLFSVAGPTVYANANNTGSATLTASITNASALTTSDYTLSYDGTNYTLTRLSDGSVVGTATSLPTPPPTtiDGLS 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 399 LTFTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMAS----------------------------------------- 437
Cdd:PRK06945 400 LSLSGTMNAGDSFLVQPTRNAANGFSVATTDGSAIAAASpvrasagstntgtgaisqgsvssgyplpsgtttltydaatg 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 438 --------------------------------------------------------------AEDAGDSDNRNGQALLDL 455
Cdd:PRK06945 480 tlsgfpagttvtvagtpptsvtitpattpvpytsgagislvfngvsvtlsgtpadgdtftigPNTGGTNDGRNALALAKL 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 456 QSNSKTVGGAKSFNDAYASLVSDIGNKTATLKTSSTTQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQT 535
Cdd:PRK06945 560 QNAKTLDGGTATYTGAYAQLVNQVGNKASQLKVSSAAQTALLGQITAAQQSVSGVNLDEEAANLLRYQQAYQANAKVIQT 639
|
650
....*....|..
gi 486159210 536 ANAIFDALINIR 547
Cdd:PRK06945 640 ASTLFDTLLGIF 651
|
|
| FlgK |
COG1256 |
Flagellar hook-associated protein FlgK [Cell motility]; |
1-547 |
1.93e-153 |
|
Flagellar hook-associated protein FlgK [Cell motility];
Pssm-ID: 440868 [Multi-domain] Cd Length: 479 Bit Score: 447.79 E-value: 1.93e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQT 80
Cdd:COG1256 2 LFSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVVLSAAGPTATGAGQVGTGVRVTGIRRIRDEFLDAQLRSANS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 81 QSSGLTARYEQMSKIDNMLS-TSTSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVN 159
Cdd:COG1256 82 DLGYAEARADALSQLEALLGePSDTGLSTALDDFFNALQELASNPESSAARQAVLEAAQALADRFNSLSSQLQDLRADAD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 160 IAIGASVDQINNYAKQIASLNDQISRLTgvGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGS 239
Cdd:COG1256 162 SQIASTVDEINSLLSQIADLNKQIVKAE--AGGQDANDLLDQRDQLLDELSELVGVTVVEQDDGTVNVSTGNGQTLVDGD 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 240 TARQLAAVPSSADPSRTTVAYVDgTTGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDA 319
Cdd:COG1256 240 TASELSFTPSAGDPGGLSTVTLD-DSGVPSDATSSITGGSLGGLLELRDETLPEYQAQLDELARGLADAFNAVHAQGYDL 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 320 NGDAGEDFFAIgkpavlqntknkgDVAI-GATVTDASAVLATDYKISfdnnqwqvtrlasnttftvtpdangkvafdgle 398
Cdd:COG1256 319 NGNPGGDLFDI-------------DPSItGGTLTPFDTVGAGNISVN--------------------------------- 352
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 399 ltftgtpavndsftlkpvsdaivnmDVLITDEAKIAMASAEDAGDSDNRNGQALLDLQSNSKTV--GGAKSFNDAYASLV 476
Cdd:COG1256 353 -------------------------PAVIGDPSLLAAANSDGGGAGDNTNALALAALQDAKLVFdsGGSGTLSDYYASLV 407
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 486159210 477 SDIGNKTATLKTSSTTQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR 547
Cdd:COG1256 408 SDLGVDAQQAKTEAEAQEALLDQLENQRQSVSGVNLDEEMANLIKFQQAYQANARVITTADEMLDTLLNIV 478
|
|
| flgK |
PRK05683 |
flagellar hook-associated protein FlgK; Validated |
2-545 |
1.12e-109 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 235558 [Multi-domain] Cd Length: 676 Bit Score: 341.71 E-value: 1.12e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 2 SSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQ 81
Cdd:PRK05683 1 MSLISIGLSGLGASQTALAVTGNNIANVDTAGYSRQQTVQTTKASQQSGAGYIGTGTTLADVRRIYNSFLDTQLRTATSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 82 SSGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIA 161
Cdd:PRK05683 81 NSDASAYLGQISQLDKLLSDSTTGISPALQRFFTALQTAAANPTDTAARQLLLTQAQGLSKRFNSLSSQLNQQNSNINSQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 162 IGASVDQINNYAKQIASLNDQISRLTgvGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDgGTYNITMANGYSLVQGSTA 241
Cdd:PRK05683 161 LSAMTDQVNNLTTSIASYNKQIAQAS--ASGATPNDLLDARDEAVRQLNELVGVTVVERD-GNYDVYIGSGQPLVVGNTA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 242 RQLAAVPSSADPSRTTVAYVDG-TTGNIeipEKLLNTGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDAN 320
Cdd:PRK05683 238 NTLSVVPGPSDPSRYNVQLNRGsSTQDV---TSVVSGGEIGGLLRYRSDVLDPAMNELGRLALVVADQINSQLGQGIDLN 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 321 GDAGEDFF-------AIGKPAVLQNTKNKGDVAIGATVTDASAVLATDYKISFDN-NQWQVTRLASNT---TFTVTpdAN 389
Cdd:PRK05683 315 GNFGSSLFgdinsadAISQRSLAKNGNSAGSGNLNVTIKDTSKLTTSDYEVTFTSaTNYTVRRLSDGTdmgSFDLS--DN 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 390 GKVAFDGLELTFT-GTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMA-------------------------------- 436
Cdd:PRK05683 393 PAPVIDGFSLSLNgGTLAAGDSFKVTPTRNAASDIETVLTDPKKLAFAapltaeagsgnsgtgsitqptltskldiydpa 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 --------------------------------------------------------------------------------
Cdd:PRK05683 473 qtadlqnaiknstpvklvfgadssgpqsytlvdakgnaigsgtivpgqsntltlavpmpdasgnpindatftfemtisgs 552
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 437 ---------SAEDAGDSDNRNGQALLDLQSNSkTVGGAK-----SFNDAYASLVSDIGNKTATLKTSSTTQGNVVTQLSN 502
Cdd:PRK05683 553 pqagdsftvSFNGAGSSDNRNALALLGLQTKS-TVGVGSggkgtSLTDAYGKLVERVGTLASQARADATATAAVLKQAKD 631
|
650 660 670 680
....*....|....*....|....*....|....*....|...
gi 486159210 503 QQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALIN 545
Cdd:PRK05683 632 SRDSLSGVSLDEEAANLIKFQQYYTASSQIIKAAQETFSTLIN 674
|
|
| flgK |
PRK12714 |
flagellar hook-associated protein FlgK; Provisional |
2-544 |
2.48e-75 |
|
flagellar hook-associated protein FlgK; Provisional
Pssm-ID: 183697 [Multi-domain] Cd Length: 624 Bit Score: 250.64 E-value: 2.48e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 2 SSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGVQREYDAFITNQLraaqTQ 81
Cdd:PRK12714 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKITDVGRVADQLAISRL----LD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 82 SSGLTARYEQMS----KIDNMLSTSTSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQ 157
Cdd:PRK12714 77 SGGELSRLQQLSslsnRVDALYSNTATNVAGLWSNFFDSTSALSSNASSTAERQSMLDSGNSLATRFKQLNGQMDSLSNE 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 158 VNIAIGASVDQINNYAKQIASLNDQIsrltGVGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQ 237
Cdd:PRK12714 157 VNSGLTSSVDEVNRLTQQIAKINGTI----GSSAQNAAPDLLDQRDALVSKLVGYTGGTAVIQDGGFMNVFTAGGQALVV 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 238 GSTARQLAAVPSSADPSRTTVAyVDGTTGNIEIPEKLLNtGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGF 317
Cdd:PRK12714 233 GTTASKLTTVADPYQPTKLQVA-MQTQGQNVSLSPSSLG-GQIGGLLEFRSSVLEPTQAELGRLAVGMASSFNAGHSQGM 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 318 DANGDAGEDFFAIGKPAVLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVTR--LASNTTFTVTPDANGKVAFD 395
Cdd:PRK12714 311 DLYGAMGGNFFNIGSPTVAANPSNTGTASLSASFSNLSAVDGQNVTLSFDGTNWKATRadTGSAVPMTGTGTAADPLVLN 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 396 GLELTFTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMASA------------------------------------- 438
Cdd:PRK12714 391 GVSMVVGGTPASGDKFLLQPTAGLAGSLSVAITDPSRIAAATPvkatatlanqgtgkisdvkvtnaqnpalltpssiefi 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 439 --------------------------------------------EDAGDSDNRNGQALLDLQSNSKTVGGAKSFNDAYAS 474
Cdd:PRK12714 471 danqytidgagpfaytagqtisangwsfaldgapkagdtfgvgpTGAGSSDNGNAKLLAKVDDAKALNGGTVTLNGALSG 550
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 475 LVSDIGNKTATLKTSSTTQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALI 544
Cdd:PRK12714 551 LTTSVGSAARAANYSADAQKVINDQAQASRDSISGVNLDEEAANMLKLQQAYQAAAQMISTADTMFQAIL 620
|
|
| flgK_ends |
TIGR02492 |
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ... |
3-323 |
5.38e-71 |
|
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274162 [Multi-domain] Cd Length: 323 Bit Score: 230.31 E-value: 5.38e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 3 SLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQS 82
Cdd:TIGR02492 1 SLLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAVLTAVPAGGQGGKQIGTGVKVTSIRRIQDQFLDNQYRRANSSA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 83 SGLTARYEQMSKIDNMLS-TSTSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIA 161
Cdd:TIGR02492 81 GYADSRASGLSKIEQIFNdLDGSGLGTYLNNFFNALQELAKNPDSEALRQAVLESAQALANSFNQTSNELQDLRKGINAE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 162 IGASVDQINNYAKQIASLNDQIsrLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGSTA 241
Cdd:TIGR02492 161 IKSAVTEINSLLKQIASLNKEI--KQVEASGQDANDLLDQRDLLLKELSQLIGISVSENENGTVNVYTGSGQVLVDGATV 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 242 RQLAAVPSSADPSRTTVA----YVDGTTGNIEIPEKlLNTGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGF 317
Cdd:TIGR02492 239 TGSSTSPLTADTTGGKVGgdgvYLPSGSSKVTISSD-LQGGKLGGLLDLRDGVLPDLQSQLDQLAKTLADEFNEVHQSGA 317
|
....*.
gi 486159210 318 DANGDA 323
Cdd:TIGR02492 318 DLTGSA 323
|
|
| flgK |
PRK07191 |
flagellar hook-associated protein FlgK; Validated |
3-546 |
4.41e-66 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180871 [Multi-domain] Cd Length: 456 Bit Score: 221.62 E-value: 4.41e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 3 SLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQS 82
Cdd:PRK07191 2 NFIRTAFSGMQAAQAHLNATSMNIANMHTPGYSRQGVEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWQANSQQ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 83 SGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIAI 162
Cdd:PRK07191 82 GYYDAGEQYFNALELVVGNKSTSLATGLNNFFSALSAATQLPDSPPMRQQVIESANAMALRFNNVNNFIVQQKKSIGQQR 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 163 GASVDQINNYAKQIASLNDQIsrLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGSTAR 242
Cdd:PRK07191 162 DATVKQINSLTRSIADYNQKI--LKNRSDGNNISDLLDQRDLQIKKLSGLIEVRVVQQEDGTYRVSVKNGQPLVNGAVAA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 243 QLAAVPSSADPSRTTVAYvdgttGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDANGD 322
Cdd:PRK07191 240 ELAVDTSSVGTQKLTLHF-----SGATQGMNMSCGGQLGGLNDYELTTLKPLQDSTQEMAKTVADKFNDQLTKGFDMNGA 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 323 AGEDFFaigkpavlqnTKNKGDVAIGATVTDasavlatdykisfdnnqwqvtrlasnttftVTPDangkvafdglELTFT 402
Cdd:PRK07191 315 PGKPLF----------TFNPSDPNGMLQLSA------------------------------IKPE----------ELALS 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 403 GTPAvndsftlkpvsdaivnmdvlitdeakiamasaeDAGDSDNRngQALLDLQSNSKTVGGAK--SFNDAYASLVSDIG 480
Cdd:PRK07191 345 GDPK---------------------------------PPGDNSNL--FELLEIRSQKTDLPGMGnvSLGDAATALVGYIA 389
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 486159210 481 NKTATLKTSSTTQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINI 546
Cdd:PRK07191 390 ITSNQNHSELENAENVRNQAERYWESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLLAL 455
|
|
| flgK |
PRK07739 |
flagellar hook-associated protein FlgK; Validated |
8-545 |
7.07e-65 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236084 [Multi-domain] Cd Length: 507 Bit Score: 219.50 E-value: 7.07e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 8 AMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAG-------GWVGNGVYVSGVQREYDAFITNQLRAAQT 80
Cdd:PRK07739 11 ARRGLFAQQAALYVTGHNIANANTPGYTRQRVNLAATPPYPTPGmnrpkipGQMGTGVEAGSVERIRDQFLDIQYRRENN 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 81 QSSGLTARYEQMSKIDN-MLSTSTSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVN 159
Cdd:PRK07739 91 KLGYWETKADALSQMEDiMNEPSDTGLNKVLDQFWNSLQELSKNPENLGARSVVRQRAQALAETFNYLSQSLTDIQNDLK 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 160 IAIGASVDQINNYAKQIASLNDQISRLtgVGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDG---------GTYNITMA 230
Cdd:PRK07739 171 SEIDVTVKEINSLASQISDLNKQIAKV--EPNGYLPNDLYDQRDLLLDELSKIVNITVEYNKSggnaledaeGTFRIDIL 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 231 NGYS---LVQGSTArqlAAVPSSADPSRTTVAYVDGTTGNIEIPEKLLNT------GSLGGILTFRSQDLDQTRNT---- 297
Cdd:PRK07739 249 GGNGkgtLVDGKDS---TVNELSVNKDDVTGLVTDLSLGGTTVSWDDTGQpvnpssGKLKGLLEMYGYMSGNGEEKglyp 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 298 -----LGQLALAFAEAFNTQHKAGFDANGDAGEDFFaigkpavlqntknkgdvaigatvtdasavlatdykisfdnnqwq 372
Cdd:PRK07739 326 emlndLDKLAYTFATAFNEVHKQGYGLNGSTGIDFF-------------------------------------------- 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 373 vtrlasnttftvtpdangkvafdglelTFTGTPAVNDSFTLKpVSDAIVNmdvlitDEAKIAmASAEDAGDSDNRNGQAL 452
Cdd:PRK07739 362 ---------------------------DGTGDSTKGAAKTIK-VSDDILA------DLNNIA-AASDDGELGDGSNALNL 406
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 453 LDLQSNSKTVGGAK-SFNDAYASLVSDIGNKTATLKTSSTTQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQ 531
Cdd:PRK07739 407 ANLKDFKLNSGLDTtTFDDFYQSLIGNLGVDAQEANRMAENQEVLVDQVDNRRQSVSGVSLDEEMTNMIKFQHAYNAAAR 486
|
570
....*....|....
gi 486159210 532 VLQTANAIFDALIN 545
Cdd:PRK07739 487 MITAIDEMLDKIIN 500
|
|
| flgK |
PRK08871 |
flagellar hook-associated protein FlgK; Validated |
2-547 |
3.24e-64 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 181572 [Multi-domain] Cd Length: 626 Bit Score: 220.87 E-value: 3.24e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 2 SSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQ 81
Cdd:PRK08871 3 SDLLNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNDPRQFGGSTYGMGVHVENVRRSWDQFAVNELNLSTTN 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 82 SSGLTARYEQMSKIDNMLSTSTSS-LATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGL---VNQFKTTdqyLRDQDKQ 157
Cdd:PRK08871 83 LANKTDTEANLDMLSSMLSSVASKkIPENLNEWFDAVKTLADSPNDLGARKVVLEKAKLIsqtLNDFHET---VRQQKDV 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 158 VNIAIGASVDQINNYAKQIASLNDQISRLTGvgagaSPNNLLDQRDQLVSELNQIVGVEVSVQDGG-TYNITMANGYSLV 236
Cdd:PRK08871 160 TNKKLDLGVERINQIALEIRDIHRLMMRTPG-----PHNDLMDQHEKLVKELSQYTKVTVTPRKNAeGFNVHIGNGHTLV 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 237 QGSTARQLAAVPSSADPSRTTVAYVDGttGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAG 316
Cdd:PRK08871 235 SGTEASQLKMIDGYPDPHQRRLAMVEG--KGLKAIKADDIGGKLGALLDMRDEHIPYLMDELGRLATGFSSEVNTLQSQG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 317 FDANGDAGEDFF------AIGKPAVLQNTKNKGDVAIgaTVTDASAVLATDYKISFDNNQWQVTRLASNTTFTVTPDANG 390
Cdd:PRK08871 313 LDLRGNVGGNLFtdvnseVIARSRVVTAPNSKADVAV--FIDDISQLKGGEYALRYDGSQYTVTKPSGEQQSLDPDGNPS 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 391 KVAFDGLELTFTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMASAE---------------DAGD------------ 443
Cdd:PRK08871 391 AFYLDGMRVEVRNPPQAGERILLRPTRNGAAQIKLETNDAKKIAAQSYEasttfaqgkakfkilQAGDlrefevivsptg 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 444 ----------------------------------------------------SDNRNGQALLDLQSNSKTVGGAKSFNDA 471
Cdd:PRK08871 471 dqfavtdtkgnillqpqpyppkgpvtvggttfeltegalandkftanlvpseGDNGNLRKMQNLQTDKVMDDGESTIIDL 550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 472 YASLVSDIGnktatLKTSSTTQGNVVTQLSNQQ-----QSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINI 546
Cdd:PRK08871 551 YHNLNTEVG-----LKKATATRLADVARLEKEAaqsrvASISGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTILQL 625
|
.
gi 486159210 547 R 547
Cdd:PRK08871 626 R 626
|
|
| flgK |
PRK12715 |
flagellar hook-associated protein FlgK; Provisional |
3-546 |
1.33e-59 |
|
flagellar hook-associated protein FlgK; Provisional
Pssm-ID: 183698 [Multi-domain] Cd Length: 649 Bit Score: 208.82 E-value: 1.33e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 3 SLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQS 82
Cdd:PRK12715 2 SILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPIASNRYAGSYIGAGVSVSSIYRNVDQFANAQVRSTLSYR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 83 SGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIAI 162
Cdd:PRK12715 82 TQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQLNSTPDNIATRGVVLKQSQLLAQQFNSLQTKLEEYERNSTLQV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 163 GASVDQINNYAKQIASLNDQIsrltgVGAGASPnNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGSTAR 242
Cdd:PRK12715 162 TESVKIINRITKELAEVNGKL-----LGNNNIP-ELLDHRDELLKQLSGYTDLSIFDQGDGTISVGIASGDMLVAGTQQR 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 243 QLAAVPSSADPSRTTVAYVDGTTGNIEIPEKlLNTGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDANGD 322
Cdd:PRK12715 236 DLVVGTGKDSIFGTKIFLSSGGNNQVDITDR-LTTGMLGGLIDYEKNVLGQASQLIGQMAIGLAQTFNAQHKLGMDMNSQ 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 323 AGEDFFA-IGKPAVL-----QNTKNKGDVAIGATVTDASAVLATDYKISFDN---NQWQVTRLASNTTFTVTPDAN---- 389
Cdd:PRK12715 315 IGKDFFTdFNSPGQMlkrstASADNSGTAVLSVNISDISQVKLSDYDLIISDtgaNELRLIRKSDGTSTTLTWSSSppap 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 390 --GKVAFDGLELTFTGTP--AVNDSFTLKPVSDAIVNMDVLITDEAKIAMASA--------------------------- 438
Cdd:PRK12715 395 paGQVVIDGMTITVNDLSqlANNDHYTLTPTRGAARDFALEIKDAYEIALASPvkttaslnntgqgqiilgpvlntasvn 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 439 -----------------------------------------------------------------EDAGDSDNRNGQALL 453
Cdd:PRK12715 475 kqfridfisdtqynlvnvtdsttagpfafvpntnnviqipdgitpsysvvlsgipksgdqfttdyNTGGFGDNRNGLILG 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 454 DLQSNSKTVGGAKSFNDAYASLVSDIGNKTATLKTSSTTQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVL 533
Cdd:PRK12715 555 NIQQNKIFSNGSETLFDRYGSLLAEVGGRTNQAKTSFESADILHKQALDFQDSKSGVNLDEEGANLLVFQQAYQAAGKLM 634
|
650
....*....|...
gi 486159210 534 QTANAIFDALINI 546
Cdd:PRK12715 635 EISNQIMNLLFDI 647
|
|
| flgK |
PRK06665 |
flagellar hook-associated protein FlgK; Validated |
11-545 |
2.21e-52 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180650 [Multi-domain] Cd Length: 627 Bit Score: 188.72 E-value: 2.21e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 11 GLNAAQAALNTASNNISSYNVAGYTRQTTIM-------AQANSTLGAGGWVGNGVYVSGVQREYDAFITNQLrAAQTQSS 83
Cdd:PRK06665 14 SLFAHKQALQTTGHNISNASTKGYSRQRVTMktfdplyAPSLNRAEKPGQIGQGVEIQSIERIRDELLDSRI-IEESGRL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 84 GL-TARYEQMSKIDNMLSTST-SSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIA 161
Cdd:PRK06665 93 GYwKTKDKYLSQLEQVYNEPEdQSLRTRLDDFWDSWQDLSNYPEGLAERQVVLERAQSLGERIHDRYRSLERIRDMANDE 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 162 IGASVDQINNYAKQIASLNDQISRLTGVGAgaSPNNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMAnGYSLVQGSTA 241
Cdd:PRK06665 173 IEITVEEINNILRNIADLNEQIVKSQAMGD--NPNDLLDRRDLLVDKLSSLIDVSIERSDPDEFMIHIG-GRHLVQGNIA 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 242 RQLAAVPSSadPSRTTVAYVDGTTGNieipEKLLNTGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDANG 321
Cdd:PRK06665 250 NELDLEANP--PNEGYWDILWSANGD----PALLRTGKLGALIELRDTDIRDEINELDTLAINIVDLVNEIHRSGFGLNG 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 322 DAGEDFFAIGKPA-----------------------------------------VLQNTKNKGDVAIGATVTD------- 353
Cdd:PRK06665 324 KTGRDFFTQEYKLtntrgnydsngdgqfdsthifrvngtnsidpdekigisgtlRFQASNKNGTVEIPYNATDtvndvik 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 354 --------ASAVLATDYKISF--------DNNQWQVTRLASNTTFTVT----------------PDANGKVAFDGLELTF 401
Cdd:PRK06665 404 rinnsnaqVTAYLNHNNKLVLkatkadddENPDFVIRHIEDSGDFLVGytgilnasgpegaydyQRIDTINKLQGNGADY 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 402 TGTPAVNDSFTLKpVSDAIVNmdvlitDEAKIAMASAED---AGDSDNRNGQALLDLQSNSKTVGGAKSFNDAYASLVSD 478
Cdd:PRK06665 484 TVSPLKHPASWIK-VNDIIRN------DPSNIAAGIGDPtnpNGIGDGRAALAIASLRNSPVMVGKSKTFDDFFANTISN 556
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 486159210 479 IGNKTATLKTSSTTQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALIN 545
Cdd:PRK06665 557 IGIKGETAEIEKESQNQIMKELEDLRQSVSGVNLDEELANMIEFQHGYNASARFISVSNELLDTIIN 623
|
|
| flgK |
PRK08471 |
flagellar hook-associated protein FlgK; Validated |
2-547 |
5.85e-36 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236270 [Multi-domain] Cd Length: 613 Bit Score: 142.11 E-value: 5.85e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 2 SSLiNNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQ 81
Cdd:PRK08471 6 SSL-NTGYTGLQAAQVMVDTTGNNISNASSEFYTRQRVVQSAQAALNTGGGNVGTGTDIETIVRIHDEFVYSRYKKASTE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 82 ssgltarYEQMSKIDNMLSTSTS--------SLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRD 153
Cdd:PRK08471 85 -------LEYTDYEFSTLQEASQyfpdlddtGILKDLQDYFNAWNDFASNPKDSAQKQALAQKTETLTNNIKDTRERLDT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 154 QDKQVNIAIGASVDQINNYAKQIASLNDQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVSVQD------------ 221
Cdd:PRK08471 158 LQKKVNEELKVTVDEINSLGKQIAEINKQIKEVEAGKTLKHANELRDKRDELELTLSKLVGANVFKSSiksdsrldttsa 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 222 --GGTYNITMaNGYSLVQGSTARQLAAVPSSADPSRTTVAYV--DGTTgnIEIPEKlLNTGSLGGILTFRSQDLD----- 292
Cdd:PRK08471 238 dfGESYNLNI-GGFNIVDGSNFHPLVLDEDENKGGFNQIYYEsdDFKR--IDITDK-ISGGKVGALLDLRGRNYDggsgg 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 293 -------QTRNTLGQLALAFAEAFN------TQHKA--------------GFDANGDAGEdfFAIgkpaVLQNTKN---- 341
Cdd:PRK08471 314 tldgkiqDYIDNLDTFAKTLIESTNniyaqsATESIesdplslksdealvDTNYNIQNGS--FDL----VVYDTDGkeva 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 342 KGDVAIGATVT--DASAVLATDYKISFDNN-----------QWQVTRLASNTTFTVTPD--ANG-KVAFDGLELTFTGTP 405
Cdd:PRK08471 388 RKTINIDVITTmnDIVQQINANTDDNNDNNanndvddyftaSFNNDTKTGDGLFQIQPKnaSQGyTVSIEDKGTNFPGAL 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 406 AVNDSFTLKPVSDAIVNMDvLITDEAKIAMASAEDAGDSDNRNGQALLDLQSNSKTVGGAKSFNDA----YASLVSDIGN 481
Cdd:PRK08471 468 GLNRFFDGDDASNISLNSS-YKKDPTTIRAWLAPVDGNNDVANKMQQLQYDKVNFYNNKGTIKNMTieeyYRFLTTKIAS 546
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 486159210 482 KTATLKTSSTTQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR 547
Cdd:PRK08471 547 DTEKNNRINDTNKALLNSVKKEYQSISGVSTDEELVNLIKFQSSYGAAAKIITTIDQMLDTLLGIK 612
|
|
| flgK |
PRK07521 |
flagellar hook-associated protein FlgK; Validated |
2-546 |
8.55e-33 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236038 [Multi-domain] Cd Length: 483 Bit Score: 131.21 E-value: 8.55e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 2 SSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTtimaqanSTLGAGGwvgNGVYVSGVQREYDAFITNQLRAAQTQ 81
Cdd:PRK07521 4 SSALNTAQSGLTATSRQTSVVSRNIANAGTPGYSRRE-------ASLVSGP---AGGQVVGISRAQDPALLAQRLLATSA 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 82 SSGLTARYEQMSKIDNMLS--TSTSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVN 159
Cdd:PRK07521 74 AAAQDTLADGLERLASTVGdnDYEGSPSARLSDFQAALQTAASSPDNTTLAQAAVDAAQDLANSLNDASDAVQSARADAD 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 160 IAIGASVDQINNYAKQIASLNDQISRLTGVGAGASPnnLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGs 239
Cdd:PRK07521 154 AEIADSVDTLNDLLAQFEDANNAVVSGTATGRDASD--ALDQRDKLLKQISQIVGVTTVTRDNNDMALYTDGGVTLFET- 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 240 TARQLAAVPSSADPSRTTVA--YVDGTTGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFntqhkAGF 317
Cdd:PRK07521 231 TPRTVTFTPTATYTAGTTGNavYIDGVPLTGGSGVMPLAGGSLAALLQLRDEIAPTYQAQLDEIARGLITRF-----AES 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 318 DANGDAGEdffaigkPAVLQNTknkgdvaiGATVTDASAvlatdykisfdnnqwqVTRLASntTFTVTPdangkvAFDgl 397
Cdd:PRK07521 306 DPTGAAGD-------PGLFTDS--------GAPADPAAG----------------EAGLAG--RISVNA------AVD-- 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 398 eltftgTPAVNDSFTLKpvsdaivnmDVLITDEAKIAMASAEDAGDSDNRNgqALLDLQSNSKTV------GGAKSFNDA 471
Cdd:PRK07521 345 ------PSQGGDPWLLR---------DGGINGAAYLGANTTGAAGFSTRLN--ALVDALSAPRTFdsaaglSGSSSLMDL 407
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 486159210 472 YASLVSDIGNKTATLKTSSTTQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINI 546
Cdd:PRK07521 408 AASSLSWLEQQRSSASSEASYASALLSRADEALSNATGVDTDDEMALLLDLEQSYAASAKVISTVDEMLDSLLDA 482
|
|
| flgK |
PRK06799 |
flagellar hook-associated protein FlgK; Validated |
6-546 |
1.94e-25 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180699 [Multi-domain] Cd Length: 431 Bit Score: 108.82 E-value: 1.94e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 6 NNAMSGLNAAQAALNTASNNISSYNVAGYTRQttiMAQANSTLGAGGW-----VGNGVYVSGVQREYDAFITNQLRAAQT 80
Cdd:PRK06799 7 NTPLSGMLAAQMGLQTTQQNLSNIHTPGYVRQ---MVNYGSVGASGGLlpeqqIGYGVQTLGVDRITDEVKTKQYNDQLS 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 81 QSSGLTARYEQMSKIDNMLSTS-TSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVN 159
Cdd:PRK06799 84 QLSYYNYMNSALSRVESMVGTTgKNSLSSLMDGFFNAFREVAKNPEQANYYDTLISETGKFTSQLNRLAKGLDELEAQTT 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 160 IAIGASVDQINNYAKQIASLNDQIsrltGVGAGASPNNLLDQRDQLVSELNQIVGVEVsvqdggtynitmangyslvqgs 239
Cdd:PRK06799 164 EDIEAHVNEFNRLAKSLAEANKKI----GQAGTQVPNQLLDERDRILTEMSKYANIEV---------------------- 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 240 tarqlaavpsSADPSRTTVAYVdgttgnieipekllntgSLGGILTFRSQDLDQTRNTLGQLALAFAeafntqhKAGFDA 319
Cdd:PRK06799 218 ----------SYESMNPNIASV-----------------RMNGVLTVNGQDTYPLQLNKTKEPMEFE-------IYGSEI 263
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 320 NGDAGEDFFAIGKPAVLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVtrlasnttftvtpdangkvafdglel 399
Cdd:PRK06799 264 PLPSGAIISAIDTKAKIKSYKKNLEELMSSLKKAVNTVMGKSFFVGDSAKKWKL-------------------------- 317
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 400 tftgTPAVNDSFTLKPVSdaivnmdvlitdeakiAMASAEDAGDSDNRNGQALldlqsnsktvggakSFNDAYASLVSDI 479
Cdd:PRK06799 318 ----NPEFAKDVSKMKIS----------------AETANKLAAITDDKYKEGL--------------SYKQALDQFIVGV 363
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 486159210 480 GNKTATLKTSSTTQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINI 546
Cdd:PRK06799 364 ASDKSAVNAYQKIHTDLLEGIQQEKMSLEGVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLFSI 430
|
|
| flgE |
PRK05682 |
flagellar hook protein FlgE; Validated |
6-64 |
2.92e-06 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 235557 [Multi-domain] Cd Length: 407 Bit Score: 49.83 E-value: 2.92e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 486159210 6 NNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQ--ANSTLGAGGWVGNGVYVSGVQ 64
Cdd:PRK05682 4 NTAVSGLNAASNRLDVIGNNIANANTTGFKSSRAEFADlyANSAGTNPTQVGSGVKVAGVA 64
|
|
| flgL |
PRK08870 |
flagellar hook-associated protein FlgL; Reviewed |
319-453 |
5.74e-06 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 236345 [Multi-domain] Cd Length: 404 Bit Score: 48.75 E-value: 5.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 319 ANGDAGEDFF-----AIGKPAVLQNTKNKGDVAIG-ATVTDASAVLATD-YKISFDNNQW-----QVTRLASNTTFTVTP 386
Cdd:PRK08870 174 ATNDPGDEVFmsvpnGGGDYVPNANASNTGTGLLGsASITDPSDPVNGDtYTITFTDNGAggtntYVTDSSTGTVVTAQA 253
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 486159210 387 -DANGKVAFDGLELTFTGTPAVNDSFTLKPVSdaivNMDVLITDEAKIAMASAEDAGDSDNRNGQALL 453
Cdd:PRK08870 254 yDAGQPINFNGVEVQISGAPAAGDSFTLTPAP----QASIFDTLDDAIAALESPVSTPAADAALQNAL 317
|
|
| FlgE |
COG1749 |
Flagellar hook protein FlgE [Cell motility]; |
1-64 |
1.10e-04 |
|
Flagellar hook protein FlgE [Cell motility];
Pssm-ID: 441355 [Multi-domain] Cd Length: 414 Bit Score: 44.78 E-value: 1.10e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 486159210 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQ--ANSTLGAGGW-VGNGVYVSGVQ 64
Cdd:COG1749 1 MMMSFNTGVSGLNAASTALDVIGNNIANSNTVGFKSSRAEFADlvAQSLSGANPTqVGGGVRVASVA 67
|
|
| FlgEFG_subfam |
TIGR03506 |
flagellar hook-basal body protein; This model encompasses three closely related flagellar ... |
3-65 |
8.45e-04 |
|
flagellar hook-basal body protein; This model encompasses three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. The names have often been mis-assigned, however. Three equivalog models, TIGR02489, TIGR02490 and TIGR02488, respectively, separate the individual forms into three genome-context consistent groups. The major differences between these genes are architectural, with variable central sections between relatively conserved N- and C-terminal domains. More distantly related are two other flagellar apparatus familis, FlgC (TIGR01395) which consists of little else but the N-and C-terminal domains and FlgK (TIGR02492) with a substantial but different central domain.
Pssm-ID: 274616 [Multi-domain] Cd Length: 231 Bit Score: 41.08 E-value: 8.45e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 486159210 3 SLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQA-NSTLGAGGWVGNGVYVSGVQR 65
Cdd:TIGR03506 1 MALYTALSGLNAQSSALDVIANNIANANTTGFKRSRAEFQDLlSQSVSGSGQVGGGVRTSGVAT 64
|
|
| Flg_bb_rod |
pfam00460 |
Flagella basal body rod protein; |
5-34 |
9.62e-04 |
|
Flagella basal body rod protein;
Pssm-ID: 459821 [Multi-domain] Cd Length: 30 Bit Score: 36.78 E-value: 9.62e-04
10 20 30
....*....|....*....|....*....|
gi 486159210 5 INNAMSGLNAAQAALNTASNNISSYNVAGY 34
Cdd:pfam00460 1 LYTAVSALNAQQIRLDVIANNIANANTPGY 30
|
|
| Flg_bbr_C |
pfam06429 |
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ... |
499-546 |
6.26e-03 |
|
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.
Pssm-ID: 428939 [Multi-domain] Cd Length: 74 Bit Score: 35.70 E-value: 6.26e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 486159210 499 QLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINI 546
Cdd:pfam06429 27 RVQQGYLEGSNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTANQL 74
|
|
| PRK08026 |
PRK08026 |
FliC/FljB family flagellin; |
345-516 |
6.47e-03 |
|
FliC/FljB family flagellin;
Pssm-ID: 236140 [Multi-domain] Cd Length: 529 Bit Score: 39.34 E-value: 6.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 345 VAIGATVTDASAvlATDYKISFDNNQWQVTRLAS-----------------NTTFTVTPDANGKVAFDG--LELTFTGTP 405
Cdd:PRK08026 222 LGDGDKVTATAT--GGDYTYNAKSGKYQAADLAAtltpdvggtagasytikDGTYEVNVDSDGKITLGGsaLYIDATGNL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 486159210 406 AVNDSFTLKP--VSDAIVNMDVLITDEAKIAMASAEDAGDSDNRNGQALLDLQSNSKTV--GGAKSFNDAYASLVSDIGN 481
Cdd:PRK08026 300 TTNNAGAATKatLDALKKTASEGAATAKAALAAAGVTVADGVTAKTVKMSYTDKNGKVIdgGYAVKTGDDYYAADYDEIT 379
|
170 180 190
....*....|....*....|....*....|....*
gi 486159210 482 KTATLKTSSTTQGNVVTQlsNQQQSISGVNLDEEY 516
Cdd:PRK08026 380 GAISATTTYYTAKDGTTK--TAANKLGGADGKTEV 412
|
|
| |
