MULTISPECIES: ATP-binding protein, partial [Enterobacterales]
P-loop NTPase family protein( domain architecture ID 1562424)
P-loop NTPase (nucleoside triphosphate hydrolase) family protein contains two conserved sequence signatures, the Walker A motif (the P-loop proper) and Walker B motif which bind, respectively, the beta and gamma phosphate moieties of the bound nucleotide (typically ATP or GTP), and a Mg(2+) cation
List of domain hits
Name | Accession | Description | Interval | E-value | ||
P-loop_NTPase super family | cl38936 | P-loop containing Nucleoside Triphosphate Hydrolases; Members of the P-loop NTPase domain ... |
1-52 | 1.78e-32 | ||
P-loop containing Nucleoside Triphosphate Hydrolases; Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a hydrophobic residue). The Walker A and B motifs bind the beta-gamma phosphate moiety of the bound nucleotide (typically ATP or GTP) and the Mg2+ cation, respectively. The P-loop NTPases are involved in diverse cellular functions, and they can be divided into two major structural classes: the KG (kinase-GTPase) class which includes Ras-like GTPases and its circularly permutated YlqF-like; and the ASCE (additional strand catalytic E) class which includes ATPase Binding Cassette (ABC), DExD/H-like helicases, 4Fe-4S iron sulfur cluster binding proteins of NifH family, RecA-like F1-ATPases, and ATPases Associated with a wide variety of Activities (AAA). Also included are a diverse set of nucleotide/nucleoside kinase families. The actual alignment was detected with superfamily member PRK09183: Pssm-ID: 476819 Cd Length: 259 Bit Score: 111.34 E-value: 1.78e-32
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Name | Accession | Description | Interval | E-value | ||
PRK09183 | PRK09183 | transposase/IS protein; Provisional |
1-52 | 1.78e-32 | ||
transposase/IS protein; Provisional Pssm-ID: 181681 Cd Length: 259 Bit Score: 111.34 E-value: 1.78e-32
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IstB_IS21 | pfam01695 | IstB-like ATP binding protein; This protein contains an ATP/GTP binding P-loop motif. It is ... |
1-43 | 2.15e-19 | ||
IstB-like ATP binding protein; This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function. Pssm-ID: 426385 [Multi-domain] Cd Length: 238 Bit Score: 76.72 E-value: 2.15e-19
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IS21_help_AAA | NF038214 | IS21-like element helper ATPase IstB; This protein family model resembles PF01695, but was ... |
1-39 | 4.55e-18 | ||
IS21-like element helper ATPase IstB; This protein family model resembles PF01695, but was built to hit full-length AAA+ ATPases of IS21 family IS (insertion sequence) elements. Pssm-ID: 439516 Cd Length: 232 Bit Score: 73.27 E-value: 4.55e-18
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DnaC | COG1484 | DNA replication protein DnaC [Replication, recombination and repair]; |
1-40 | 8.21e-16 | ||
DNA replication protein DnaC [Replication, recombination and repair]; Pssm-ID: 441093 [Multi-domain] Cd Length: 242 Bit Score: 67.50 E-value: 8.21e-16
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Name | Accession | Description | Interval | E-value | ||
PRK09183 | PRK09183 | transposase/IS protein; Provisional |
1-52 | 1.78e-32 | ||
transposase/IS protein; Provisional Pssm-ID: 181681 Cd Length: 259 Bit Score: 111.34 E-value: 1.78e-32
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IstB_IS21 | pfam01695 | IstB-like ATP binding protein; This protein contains an ATP/GTP binding P-loop motif. It is ... |
1-43 | 2.15e-19 | ||
IstB-like ATP binding protein; This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function. Pssm-ID: 426385 [Multi-domain] Cd Length: 238 Bit Score: 76.72 E-value: 2.15e-19
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IS21_help_AAA | NF038214 | IS21-like element helper ATPase IstB; This protein family model resembles PF01695, but was ... |
1-39 | 4.55e-18 | ||
IS21-like element helper ATPase IstB; This protein family model resembles PF01695, but was built to hit full-length AAA+ ATPases of IS21 family IS (insertion sequence) elements. Pssm-ID: 439516 Cd Length: 232 Bit Score: 73.27 E-value: 4.55e-18
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DnaC | COG1484 | DNA replication protein DnaC [Replication, recombination and repair]; |
1-40 | 8.21e-16 | ||
DNA replication protein DnaC [Replication, recombination and repair]; Pssm-ID: 441093 [Multi-domain] Cd Length: 242 Bit Score: 67.50 E-value: 8.21e-16
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PRK06526 | PRK06526 | transposase; Provisional |
1-40 | 4.86e-09 | ||
transposase; Provisional Pssm-ID: 180607 Cd Length: 254 Bit Score: 49.10 E-value: 4.86e-09
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PRK08181 | PRK08181 | transposase; Validated |
1-44 | 8.88e-06 | ||
transposase; Validated Pssm-ID: 136670 [Multi-domain] Cd Length: 269 Bit Score: 40.30 E-value: 8.88e-06
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Blast search parameters | ||||
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