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Conserved domains on  [gi|484593532|gb|AGK62175|]
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K+ transport systems, NAD-binding component [Archaeoglobus sulfaticallidus PM70-1]

Protein Classification

potassium channel family protein( domain architecture ID 11426271)

potassium channel family protein spans the cell membrane to form a conduction pathway or pore, through which selective ions such as potassium, sodium, and calcium translocate across cell membranes, similar to Trk system potassium uptake protein TrkA

CATH:  1.20.5.870|3.30.70.1450|3.40.50.720
Gene Ontology:  GO:0016020|GO:0022857|GO:0030001|GO:0034220
PubMed:  15816170|9525859|11836519|1772658|11178249
SCOP:  4000005|4000027
TCDB:  1.A.1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TrkA COG0569
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion ...
 22-307 5.52e-64

Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];


:

Pssm-ID: 440335 [Multi-domain]  Cd Length: 296  Bit Score: 204.14  E-value: 5.52e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532  22 GTIGFTVIEGWSLFDSFYMTVITITTTGYKEVYDLSYNGRFLAIFLMFFGIGVFFYSINLIIPTIV------QRRLERWR 95
Cdd:COG0569    9 VLLFAMGIEGLVLLDALYGLLITLTTVTTLGGGLLDPVTLVAAIFLIGVVIIPLGYTLITFGDAVLfgglleALRRRRME 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532  96 KLLEKISDHYIICGYGVMGREIAQELVKvtNKDKIVIIDENMEKVSLARENGYIAIQGDSVEEDVLERARIKHAKALIAC 175
Cdd:COG0569   89 RGIKKLKMHVIIIGAGRVGRSLARELEE--EGHDVVVIDKDPERVERLAEEDVLVIVGDATDEEVLEEAGIEDADAVIAA 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532 176 MN-DSSNAFAIMSAKEMNPnIYTMAVARTPSGVKNTKRAGADYVLSPYSDTAKKAMVILSRQSAADFLEIIskvGKRFLL 254
Cdd:COG0569  167 TGdDEANILACLLAKELGV-PRIIARANDPEYADLLERLGADVVISPERLAARRIARLLLRPGVLDVLELA---DGDAEI 242

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 484593532 255 EKVQLSNK-NLDGKKIKDLDLRRKTGATIVAVERKGDILIPDADLSLKFGDNLY 307
Cdd:COG0569  243 VEVTVPEGsPLVGKTLKELDLRERYGVTVVAIKRGGEVIIPSGDTVLEAGDELI 296
 
Name Accession Description Interval E-value
TrkA COG0569
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion ...
 22-307 5.52e-64

Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];


Pssm-ID: 440335 [Multi-domain]  Cd Length: 296  Bit Score: 204.14  E-value: 5.52e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532  22 GTIGFTVIEGWSLFDSFYMTVITITTTGYKEVYDLSYNGRFLAIFLMFFGIGVFFYSINLIIPTIV------QRRLERWR 95
Cdd:COG0569    9 VLLFAMGIEGLVLLDALYGLLITLTTVTTLGGGLLDPVTLVAAIFLIGVVIIPLGYTLITFGDAVLfgglleALRRRRME 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532  96 KLLEKISDHYIICGYGVMGREIAQELVKvtNKDKIVIIDENMEKVSLARENGYIAIQGDSVEEDVLERARIKHAKALIAC 175
Cdd:COG0569   89 RGIKKLKMHVIIIGAGRVGRSLARELEE--EGHDVVVIDKDPERVERLAEEDVLVIVGDATDEEVLEEAGIEDADAVIAA 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532 176 MN-DSSNAFAIMSAKEMNPnIYTMAVARTPSGVKNTKRAGADYVLSPYSDTAKKAMVILSRQSAADFLEIIskvGKRFLL 254
Cdd:COG0569  167 TGdDEANILACLLAKELGV-PRIIARANDPEYADLLERLGADVVISPERLAARRIARLLLRPGVLDVLELA---DGDAEI 242

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 484593532 255 EKVQLSNK-NLDGKKIKDLDLRRKTGATIVAVERKGDILIPDADLSLKFGDNLY 307
Cdd:COG0569  243 VEVTVPEGsPLVGKTLKELDLRERYGVTVVAIKRGGEVIIPSGDTVLEAGDELI 296
TrkA_N pfam02254
TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include ...
 105-221 2.44e-31

TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.


Pssm-ID: 426679 [Multi-domain]  Cd Length: 115  Bit Score: 113.77  E-value: 2.44e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532  105 YIICGYGVMGREIAQELVKvtnKDKIVIIDENMEKVSLARENGYIAIQGDSVEEDVLERARIKHAKALIACM-NDSSNAF 183
Cdd:pfam02254   1 IIIIGYGRVGRSLAEELSE---GGDVVVIDKDEERVEELREEGVPVVVGDATDEEVLEEAGIEEADAVIAATgDDEANIL 77

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 484593532  184 AIMSAKEMNPNIYTMAVARTPSGVKNTKRAGADYVLSP 221
Cdd:pfam02254  78 IVLLARELNPDKKIIARANDPEHAELLRRLGADHVISP 115
PRK10537 PRK10537
voltage-gated potassium channel protein;
33-221 2.37e-23

voltage-gated potassium channel protein;


Pssm-ID: 236711 [Multi-domain]  Cd Length: 393  Bit Score: 98.94  E-value: 2.37e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532  33 SLFDSFYMTVITITTTGYKEVYDLSYNGRFLAIFLMFFGIGVFFYSINLIIPTIVQRRLERW---RKLLEKISDHYIICG 109
Cdd:PRK10537 168 SLSTAFYFSIVTMSTVGYGDIVPVSESARLFTISVIILGITVFATSISAIFGPVIRGNLKRLvkgRISHMHRKDHFIICG 247

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532 110 YGVMGREIAQELVKvtNKDKIVIIdenmekVSLARENGYIA----IQGDSVEEDVLERARIKHAKALIA-CMNDSSNAFA 184
Cdd:PRK10537 248 HSPLAINTYLGLRQ--RGQAVTVI------VPLGLEHRLPDdadlIPGDSSDSAVLKKAGAARARAILAlRDNDADNAFV 319

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 484593532 185 IMSAKEMNPNIYTMAVARTPSGVKNTKRAGADYVLSP 221
Cdd:PRK10537 320 VLAAKEMSSDVKTVAAVNDSKNLEKIKRVHPDMIFSP 356
 
Name Accession Description Interval E-value
TrkA COG0569
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion ...
 22-307 5.52e-64

Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];


Pssm-ID: 440335 [Multi-domain]  Cd Length: 296  Bit Score: 204.14  E-value: 5.52e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532  22 GTIGFTVIEGWSLFDSFYMTVITITTTGYKEVYDLSYNGRFLAIFLMFFGIGVFFYSINLIIPTIV------QRRLERWR 95
Cdd:COG0569    9 VLLFAMGIEGLVLLDALYGLLITLTTVTTLGGGLLDPVTLVAAIFLIGVVIIPLGYTLITFGDAVLfgglleALRRRRME 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532  96 KLLEKISDHYIICGYGVMGREIAQELVKvtNKDKIVIIDENMEKVSLARENGYIAIQGDSVEEDVLERARIKHAKALIAC 175
Cdd:COG0569   89 RGIKKLKMHVIIIGAGRVGRSLARELEE--EGHDVVVIDKDPERVERLAEEDVLVIVGDATDEEVLEEAGIEDADAVIAA 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532 176 MN-DSSNAFAIMSAKEMNPnIYTMAVARTPSGVKNTKRAGADYVLSPYSDTAKKAMVILSRQSAADFLEIIskvGKRFLL 254
Cdd:COG0569  167 TGdDEANILACLLAKELGV-PRIIARANDPEYADLLERLGADVVISPERLAARRIARLLLRPGVLDVLELA---DGDAEI 242

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 484593532 255 EKVQLSNK-NLDGKKIKDLDLRRKTGATIVAVERKGDILIPDADLSLKFGDNLY 307
Cdd:COG0569  243 VEVTVPEGsPLVGKTLKELDLRERYGVTVVAIKRGGEVIIPSGDTVLEAGDELI 296
TrkA_N pfam02254
TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include ...
 105-221 2.44e-31

TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.


Pssm-ID: 426679 [Multi-domain]  Cd Length: 115  Bit Score: 113.77  E-value: 2.44e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532  105 YIICGYGVMGREIAQELVKvtnKDKIVIIDENMEKVSLARENGYIAIQGDSVEEDVLERARIKHAKALIACM-NDSSNAF 183
Cdd:pfam02254   1 IIIIGYGRVGRSLAEELSE---GGDVVVIDKDEERVEELREEGVPVVVGDATDEEVLEEAGIEEADAVIAATgDDEANIL 77

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 484593532  184 AIMSAKEMNPNIYTMAVARTPSGVKNTKRAGADYVLSP 221
Cdd:pfam02254  78 IVLLARELNPDKKIIARANDPEHAELLRRLGADHVISP 115
Kch COG1226
Voltage-gated potassium channel Kch [Inorganic ion transport and metabolism];
62-226 3.24e-28

Voltage-gated potassium channel Kch [Inorganic ion transport and metabolism];


Pssm-ID: 440839 [Multi-domain]  Cd Length: 279  Bit Score: 110.59  E-value: 3.24e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532  62 FLAIFLMFFGIGVFFYSINLIIPTIVQRRLERWRKLLEKI--SDHYIICGYGVMGREIAQELVkvTNKDKIVIIDENMEK 139
Cdd:COG1226   82 LLVLLLLLLLLLLLLLLALLLLLLALAAREEEAEAAEDAIdlEGHVIIAGFGRVGQIVARLLR--AEGIPFVVIDLDPER 159

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532 140 VSLARENGYIAIQGDSVEEDVLERARIKHAKALIACMNDSSNAFAIMS-AKEMNPNIYTMAVARTPSGVKNTKRAGADYV 218
Cdd:COG1226  160 VEELRRFGIKVYYGDATRPDVLEAAGIERARALVVAIDDPEAALRIVElARELNPDLKIIARARDREHAEELRQAGADEV 239


                 ....*...
gi 484593532 219 LSPYSDTA 226
Cdd:COG1226  240 VRETFESA 247
PRK10537 PRK10537
voltage-gated potassium channel protein;
33-221 2.37e-23

voltage-gated potassium channel protein;


Pssm-ID: 236711 [Multi-domain]  Cd Length: 393  Bit Score: 98.94  E-value: 2.37e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532  33 SLFDSFYMTVITITTTGYKEVYDLSYNGRFLAIFLMFFGIGVFFYSINLIIPTIVQRRLERW---RKLLEKISDHYIICG 109
Cdd:PRK10537 168 SLSTAFYFSIVTMSTVGYGDIVPVSESARLFTISVIILGITVFATSISAIFGPVIRGNLKRLvkgRISHMHRKDHFIICG 247

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532 110 YGVMGREIAQELVKvtNKDKIVIIdenmekVSLARENGYIA----IQGDSVEEDVLERARIKHAKALIA-CMNDSSNAFA 184
Cdd:PRK10537 248 HSPLAINTYLGLRQ--RGQAVTVI------VPLGLEHRLPDdadlIPGDSSDSAVLKKAGAARARAILAlRDNDADNAFV 319

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 484593532 185 IMSAKEMNPNIYTMAVARTPSGVKNTKRAGADYVLSP 221
Cdd:PRK10537 320 VLAAKEMSSDVKTVAAVNDSKNLEKIKRVHPDMIFSP 356
trkA PRK09496
Trk system potassium transporter TrkA;
106-315 2.15e-19

Trk system potassium transporter TrkA;


Pssm-ID: 236541 [Multi-domain]  Cd Length: 453  Bit Score: 88.26  E-value: 2.15e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532 106 IICGYGVMGREIAQELVkVTNKDkIVIIDENMEKVSLARENGYI-AIQGDSVEEDVLERARIKHAKALIACMN-DSSNAF 183
Cdd:PRK09496   4 IIVGAGQVGYTLAENLS-GENND-VTVIDTDEERLRRLQDRLDVrTVVGNGSSPDVLREAGAEDADLLIAVTDsDETNMV 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532 184 AIMSAKEMNPNIYTMAVARTPS-----GVKNTKRAGADYVLSPYSDTAKKAMVILSRQSAADFLEiiskvgkrFLLEKVQ 258
Cdd:PRK09496  82 ACQIAKSLFGAPTTIARVRNPEyaeydKLFSKEALGIDLLISPELLVAREIARLIEYPGALDVEE--------FADGRVQ 153

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 484593532 259 L------SNKNLDGKKIKDLD-LRRKTGATIVAVERKGDILIPDADLSLKFGDNLYLMGSEDQL 315
Cdd:PRK09496 154 LvevkvyEGSPLVGKPLSDLReHFPDIDVRVVAIFRGGRLIIPRGDTVIEAGDEVYFIGAREHI 217
Ion_trans_2 pfam07885
Ion channel; This family includes the two membrane helix type ion channels found in bacteria.
 22-83 4.96e-13

Ion channel; This family includes the two membrane helix type ion channels found in bacteria.


Pssm-ID: 462301 [Multi-domain]  Cd Length: 78  Bit Score: 63.44  E-value: 4.96e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 484593532   22 GTIGFTVIEGW--SLFDSFYMTVITITTTGYKEVYDLSYNGRFLAIFLMFFGIGVFFYSINLII 83
Cdd:pfam07885  10 GTVYYLLEEGWewSFLDALYFSFVTLTTVGYGDIVPLTDAGRLFTIFYILIGIPLFAIFLAVLG 73
KhtT COG0490
K+/H+ antiporter KhtSTU, c-di-AMP-binding regulatory subunit KhtT, contains RCK_C (TrkA_C) ...
 264-315 7.12e-12

K+/H+ antiporter KhtSTU, c-di-AMP-binding regulatory subunit KhtT, contains RCK_C (TrkA_C) domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];


Pssm-ID: 440256 [Multi-domain]  Cd Length: 140  Bit Score: 62.25  E-value: 7.12e-12
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 484593532 264 LDGKKIKDLDLRRKTGATIVAVERKGDILI-PDADLSLKFGDNLYLMGSEDQL 315
Cdd:COG0490   81 LVGKTLGELNLRQRTGVTVVAIRRGGEVILsPGPDTVLEAGDTLVVVGTREQL 133
TrkA_C pfam02080
TrkA-C domain; This domain is often found next to the pfam02254 domain. The exact function of ...
 260-315 1.42e-11

TrkA-C domain; This domain is often found next to the pfam02254 domain. The exact function of this domain is unknown. It has been suggested that it may bind an unidentified ligand. The domain is predicted to adopt an all beta structure.


Pssm-ID: 460440 [Multi-domain]  Cd Length: 70  Bit Score: 59.16  E-value: 1.42e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 484593532  260 SNKNLDGKKIKDLDLRRKTGATIVAVERKGDILIPDADLSLKFGDNLYLMGSEDQL 315
Cdd:pfam02080   8 ENSPLVGKTLKELNLPERFGVRIVAIRRGGRLIIPSGDTVLEAGDRLLVIGTPDDL 63
trkA PRK09496
Trk system potassium transporter TrkA;
91-308 1.76e-10

Trk system potassium transporter TrkA;


Pssm-ID: 236541 [Multi-domain]  Cd Length: 453  Bit Score: 61.68  E-value: 1.76e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532  91 LERWRKLLEKISDHY---IICGYGVMGREIAQELVKvtNKDKIVIIDENMEK-VSLARE-NGYIAIQGDSVEEDVLERAR 165
Cdd:PRK09496 217 IRAVMSEFGRLEKPVkrvMIVGGGNIGYYLAKLLEK--EGYSVKLIERDPERaEELAEElPNTLVLHGDGTDQELLEEEG 294

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532 166 IKHAKALIACMNDS-SNAFAIMSAKEMNPNIyTMAVARTPSGVKNTKRAGADYVLSPYSDTAKK-----------AMVIL 233
Cdd:PRK09496 295 IDEADAFIALTNDDeANILSSLLAKRLGAKK-VIALVNRPAYVDLVEGLGIDIAISPRQATASEilrhvrrgdivAVHSL 373

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 484593532 234 sRQSAADFLEIISKvgkrfllekvqlSNKNLDGKKIKDLDLRRktGATIVAVERKGDILIPDADLSLKFGDNLYL 308
Cdd:PRK09496 374 -RRGAAEAIEAVAH------------ETSKVVGKPLKDLKLPK--GVLIGAIVRGGEVIIPTGDTVIEPGDHVIV 433
PRK03818 PRK03818
putative transporter; Validated
 185-313 4.11e-10

putative transporter; Validated


Pssm-ID: 179654 [Multi-domain]  Cd Length: 552  Bit Score: 60.65  E-value: 4.11e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532 185 IMSAKEMNPNIYTMAVARTPSGVKNT------KRAgaDYVLSPYSDT----------------AKKAMVILSRQSAADfl 242
Cdd:PRK03818 206 TINIRVENPNLHGKAIKDVPILNGDKfvcsrlKRG--DTLMVPSPDTiiqlgdllhlvgqpedLHKAQLVIGEEVDTS-- 281

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 484593532 243 eiISKVGKRFLLEKVQLSNKNLDGKKIKDLDLRRKTGATIVAVERKGDILIPDADLSLKFGDNLYLMGSED 313
Cdd:PRK03818 282 --LSTRGTDLRSERVVVTNEKVLGKKLRDLHLKNKYGVVISRLNRAGVELVASPDLSLQFGDILNLVGRPE 350
YbjL COG2985
Uncharacterized membrane protein YbjL, putative transporter [General function prediction only]; ...
 259-322 2.84e-09

Uncharacterized membrane protein YbjL, putative transporter [General function prediction only];


Pssm-ID: 442224 [Multi-domain]  Cd Length: 543  Bit Score: 57.83  E-value: 2.84e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 484593532 259 LSNKNLDGKKIKDLDLRRKTGATIVAVERKGDILIPDADLSLKFGDNLYLMGSEDQLIIAGKYL 322
Cdd:COG2985  293 VTNKEVAGKTLGELNLRNRFGVVITRVRRGGVELPATPDTVLQLGDRLTVVGPKEDVERVAKLL 356
COG3273 COG3273
Uncharacterized protein, contains PhoU and TrkA_C domains [General function prediction only];
223-315 7.95e-08

Uncharacterized protein, contains PhoU and TrkA_C domains [General function prediction only];


Pssm-ID: 442504 [Multi-domain]  Cd Length: 387  Bit Score: 53.13  E-value: 7.95e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532 223 SDTAKKAMVILSRQSAAD--FLEIISKVGKRFLLEKVQlSNKNLDGKKIKDLDLRRKTGATIVAVERKGD-ILIPDADLS 299
Cdd:COG3273  284 SDAALDIAEGVLRGLEDHpvVAEAVRESDERIVRVTVP-PGSPLVGKTLGELKLETETGVRVIAIRRGGGwIYDPDGDTR 362

                         90
                 ....*....|....*.
gi 484593532 300 LKFGDNLYLMGSEDQL 315
Cdd:COG3273  363 LRAGDVLIVKGTREGL 378
YbjL COG2985
Uncharacterized membrane protein YbjL, putative transporter [General function prediction only]; ...
 257-326 8.41e-07

Uncharacterized membrane protein YbjL, putative transporter [General function prediction only];


Pssm-ID: 442224 [Multi-domain]  Cd Length: 543  Bit Score: 50.51  E-value: 8.41e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532 257 VQLSNKNLDGKKIKDLDLRRKTGATIVAVERKGDILIPDADLSLKFGDNLYLMGSEDQLIIAGKYLSEGV 326
Cdd:COG2985  207 YRVTNPNLVGKTVAELEALLGTRVVISRIRRGGEIIVPTPDTVLQEGDIVLVVGTREALEAAEALLGEEV 276
PRK10669 PRK10669
putative cation:proton antiport protein; Provisional
 86-240 1.83e-06

putative cation:proton antiport protein; Provisional


Pssm-ID: 182633 [Multi-domain]  Cd Length: 558  Bit Score: 49.33  E-value: 1.83e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532  86 IVQRRLERWRKLLEKISDHYIICGYGVMGREIAQELVKvtNKDKIVIIDENMEKVSLARENGYIAIQGDSVEEDVLERAR 165
Cdd:PRK10669 401 TLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLA--AGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAH 478

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 484593532 166 IKHAKALIACMNDSSNAFAIM-SAKEMNPNIYTMAVARTPSGVKNTKRAGADYVLSPYSDTAKKAMVILSRQSAAD 240
Cdd:PRK10669 479 LDCARWLLLTIPNGYEAGEIVaSAREKRPDIEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLETPPAGE 554
PRK03659 PRK03659
glutathione-regulated potassium-efflux system protein KefB; Provisional
 106-202 2.14e-06

glutathione-regulated potassium-efflux system protein KefB; Provisional


Pssm-ID: 179625 [Multi-domain]  Cd Length: 601  Bit Score: 49.26  E-value: 2.14e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532 106 IICGYGVMGREIAQELVkvTNKDKIVIIDENMEKVSLARENGYIAIQGDSVEEDVLERARIKHAKALIACMNDSSNAFAI 185
Cdd:PRK03659 404 IIVGFGRFGQVIGRLLM--ANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPEDTMKI 481

                         90
                 ....*....|....*...
gi 484593532 186 MS-AKEMNPNIYTMAVAR 202
Cdd:PRK03659 482 VElCQQHFPHLHILARAR 499
PRK05326 PRK05326
potassium/proton antiporter;
226-324 4.34e-06

potassium/proton antiporter;


Pssm-ID: 235410 [Multi-domain]  Cd Length: 562  Bit Score: 48.27  E-value: 4.34e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532 226 AKKAMVILSRQSAAD---FLEIISKVGKRFLLEKVQlSNKNLDGKKIKDLDLRRktGATIVAVERKGDILIPDADLSLKF 302
Cdd:PRK05326 387 ARKLGVVVPPEARPVsrvELDPLEESDAELLEYRVP-AGSWLVGKALRDLRLPR--GALIALIIRDGKLLVPTGSTRLKA 463

                         90       100
                 ....*....|....*....|..
gi 484593532 303 GDNLYLMGSEDQLIIAGKYLSE 324
Cdd:PRK05326 464 GDVLLVLGPERDLPALERLFSQ 485
PRK03562 PRK03562
glutathione-regulated potassium-efflux system protein KefC; Provisional
 106-202 8.66e-04

glutathione-regulated potassium-efflux system protein KefC; Provisional


Pssm-ID: 235131 [Multi-domain]  Cd Length: 621  Bit Score: 41.13  E-value: 8.66e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 484593532 106 IICGYGVMGREIAQELVkvTNKDKIVIIDENMEKVSLARENGYIAIQGDSVEEDVLERARIKHAKALIACMNDSSNAFAI 185
Cdd:PRK03562 404 IIAGFGRFGQIVGRLLL--SSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTSLQL 481

                         90
                 ....*....|....*...
gi 484593532 186 MS-AKEMNPNIYTMAVAR 202
Cdd:PRK03562 482 VElVKEHFPHLQIIARAR 499
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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