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Conserved domains on  [gi|482651044|ref|YP_007890018|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Gomphocerus sibiricus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 1.33e-147

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 416.86  E-value: 1.33e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   5 LLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  85 LMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 165 SFNMLDFMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 482651044 245 TLIFLGGDFYSYSFFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGFKILL 310
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 1.33e-147

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 416.86  E-value: 1.33e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   5 LLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  85 LMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 165 SFNMLDFMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 482651044 245 TLIFLGGDFYSYSFFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGFKILL 310
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-297 1.70e-94

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 282.05  E-value: 1.70e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   13 LLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNLMISLIVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   93 MIFPYLTYM--CSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMLD 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  171 FMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSMLLTLIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 482651044  251 GDFYSYS------FFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:pfam00146 243 GWLGPFPlpgllwFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-297 9.06e-90

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 270.85  E-value: 9.06e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   4 DLLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIF 83
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  84 NLMISLIVWMIFPYLTYMC--SFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005   87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 162 LIGSFNMLDFMNYQF-YCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:COG1005  167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 482651044 241 SMLLTLIFLGG--------DFYSYS----FFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:COG1005  247 SALATTLFLGGwlgpfpilPLGGLPgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 1.33e-147

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 416.86  E-value: 1.33e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   5 LLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  85 LMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 165 SFNMLDFMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 482651044 245 TLIFLGGDFYSYSFFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGFKILL 310
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 6-298 6.85e-127

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 364.36  E-value: 6.85e-127
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   6 LMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNL 85
Cdd:MTH00225   1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  86 MISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00225  81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 166 FNMLDFMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSMLLT 245
Cdd:MTH00225 161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 482651044 246 LIFLGGDFYSYSFF--IKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLN 298
Cdd:MTH00225 241 ILFFGGFFVTIDLFliLKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLA 295
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-298 1.36e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 338.38  E-value: 1.36e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   6 LMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNL 85
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  86 MISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 166 FNMLDFMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSMLLT 245
Cdd:MTH00143 161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 482651044 246 LIFLGGDFYSY-----SFFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLN 298
Cdd:MTH00143 241 VLFFGGSSVLFllggvVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLS 298
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 5-297 1.13e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 305.68  E-value: 1.13e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   5 LLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00218   1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  85 LMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00218  81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 165 SFNMLDFMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00218 161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 482651044 245 TLIFLGGDFYSYSFFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00218 241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSL 293
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 5-297 2.66e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 302.05  E-value: 2.66e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   5 LLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00195   1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  85 LMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00195  81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 165 SFNMLDFMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00195 161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 482651044 245 TLIFLGGDfYSYSFFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00195 241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLIL 292
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-297 4.48e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 301.92  E-value: 4.48e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   5 LLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00071   4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  85 LMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00071  84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 165 SFNMLDFMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00071 164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 245 TLIFLGGDFYSY-------SFFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00071 244 TILFLGSTYNHLqpelstmNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITL 303
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-297 5.62e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 301.54  E-value: 5.62e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   7 MFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNLM 86
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  87 ISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSF 166
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 167 NMLDFMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSMLLTL 246
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 482651044 247 IFLGG-------DFYSYSFFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00104 241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 5-297 1.68e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 295.65  E-value: 1.68e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   5 LLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00111   4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  85 LMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00111  84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 165 SFNMLDFMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00111 164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 245 TLIFLG-------GDFYSYSFFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00111 244 TILFLNpstlnlpPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-297 1.17e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 288.43  E-value: 1.17e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   1 MYYDLLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFS 80
Cdd:MTH00134   1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  81 PIFNLMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00134  81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 161 ILIGSFNMLDFMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:MTH00134 161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 482651044 241 SMLLTLIFLGGDFY-------SYSFFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00134 241 NTLSAILFLGASHIptlpeltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTL 304
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-310 7.07e-96

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 286.10  E-value: 7.07e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   3 YDLLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPI 82
Cdd:MTH00040   1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  83 FNLMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00040  81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 163 IGSFNMLDFMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSM 242
Cdd:MTH00040 161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 482651044 243 LLTLIFLGGDFYSYSFF--------IKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGFKILL 310
Cdd:MTH00040 241 LSVILFLGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NADHdh pfam00146
NADH dehydrogenase;
13-297 1.70e-94

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 282.05  E-value: 1.70e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   13 LLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNLMISLIVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   93 MIFPYLTYM--CSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMLD 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  171 FMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSMLLTLIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 482651044  251 GDFYSYS------FFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:pfam00146 243 GWLGPFPlpgllwFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-297 9.06e-90

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 270.85  E-value: 9.06e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   4 DLLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIF 83
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  84 NLMISLIVWMIFPYLTYMC--SFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005   87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 162 LIGSFNMLDFMNYQF-YCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:COG1005  167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 482651044 241 SMLLTLIFLGG--------DFYSYS----FFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:COG1005  247 SALATTLFLGGwlgpfpilPLGGLPgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-311 1.66e-89

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 269.73  E-value: 1.66e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   8 FILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNLMI 87
Cdd:MTH00010   5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  88 SLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFN 167
Cdd:MTH00010  85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 168 MLDFMNYQfYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSMLLTLI 247
Cdd:MTH00010 165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 482651044 248 FLG----GDFYSYSFFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGFKILLI 311
Cdd:MTH00010 244 FTSfipsIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 6.96e-85

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 258.20  E-value: 6.96e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   5 LLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:PRK06076   9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  85 LMISLIVWMIFPYLTY--MCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:PRK06076  89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 163 IGSFNMLDFMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSM 242
Cdd:PRK06076 169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 482651044 243 LLTLIFLGG--DFYSYS--------FFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:PRK06076 249 LITTLFLGGwlPPFPLGggipgaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 5-297 1.61e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 257.35  E-value: 1.61e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   5 LLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00054   1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  85 LMISLIVWMIFPYLT--YMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00054  81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 163 IGSFNMLDFMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSM 242
Cdd:MTH00054 161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 482651044 243 LLTLIFLGGDFYSYS----------FFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00054 241 FGVILFLGGWLVISGptsyfsnfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSL 305
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-297 1.85e-82

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 252.35  E-value: 1.85e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   1 MYYDLLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFS 80
Cdd:MTH00216   1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  81 PIFNLMISLIVWMIFPYL--TYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216  81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 159 LIILIGSFNMLDFMNYQF-YCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSI 237
Cdd:MTH00216 161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 482651044 238 VFMSMLLTLIFLGG--------DFYSYSFFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00216 241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSL 308
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 3-297 2.34e-67

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 214.11  E-value: 2.34e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   3 YDLLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPI 82
Cdd:MTH00029   4 YSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPI 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  83 FNLMISLIVWMIFPYL--TYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00029  84 ISFTLAILAWAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVI 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 161 ILIGSFNMLDFMNYQFYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:MTH00029 164 LCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILM 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 241 SMLLTLIFLGG-----------------------DFYSYSFFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00029 244 SCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSL 323
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-297 2.20e-58

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 188.95  E-value: 2.20e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  11 NFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNLMISLI 90
Cdd:MTH00090   1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  91 VWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFnmld 170
Cdd:MTH00090  81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSF---- 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 171 FMNYQFYCWFIIISFPLalccFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSMLLTLIFLG 250
Cdd:MTH00090 157 SFVSSFSLSLFVIYLPF----LIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 482651044 251 gdfysYSFFIkIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00090 233 -----FSFLM-LFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 6-297 1.09e-46

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 158.93  E-value: 1.09e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   6 LMFILNFLLLIICVLIsVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIfnL 85
Cdd:MTH00058   2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVF--L 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  86 MISLIVWMIFPY-LTYMCSF-SYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILI 163
Cdd:MTH00058  79 LVLLVVFYCFIYgSYYSGSYsSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCY 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 164 GSFNMLDFMnyqFYCWFIIISFPLALCCFASC-LAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFMSM 242
Cdd:MTH00058 159 GSYSLVDFY---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSW 235

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 482651044 243 LLTLIFLGGDFYSysffIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00058 236 LGSVLFFGGGFVS----IMLLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-297 3.25e-31

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 120.06  E-value: 3.25e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   3 YDLLMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPI 82
Cdd:CHL00032  24 YGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPS 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  83 FNLMISLIVWMIFP--YLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:CHL00032 104 IAVISILLSYLVIPfgYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSIS 183

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 161 ILIGSFNMLDFMN----YQFYCWFII---ISFplaLCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAE 233
Cdd:CHL00032 184 LLSNSLSTVDIVEaqskYGFWGWNLWrqpIGF---IVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVAS 260

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 234 YTSIVFMSMLLTLIFLGGDFYSYSFFIKIAFMS-----------------------FLFIWV--RGTLPRFRYDKLMYLA 288
Cdd:CHL00032 261 YLNLLVSSLFVTVLYLGGWNLSIPYIFIPELFEinktggvfgttigifitlaktylFLFISIttRWTLPRLRMDQLLNLG 340


                 ....*....
gi 482651044 289 WKSFLPLSL 297
Cdd:CHL00032 341 WKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-293 1.74e-23

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 97.95  E-value: 1.74e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044   6 LMFILNFLLLIICVLISVAFLTLLERKVFGYIQIRKGPnkvgfvGIPQPFSDAIKLVCKEQPIPIMSNyLLYYFSPIFNL 85
Cdd:COG0650    1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044  86 MISLIVWMIFPYLTYMCSFSYG--FLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILI 163
Cdd:COG0650   74 AAMLLAALLVPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 482651044 164 GSFNMLDFMNYQ---FYCWFIIISFPLALCCFASCLAETNRTPFDFAEGESEPFTGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:COG0650  154 GSTSLSDIVAYQaahGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 482651044 241 SMLLTLIFLGGDFYSYS------FFIKIAFMSFLFIWVRGTLPRFRYDKLMYLAWKSFL 293
Cdd:COG0650  234 LSLFVNLFLPWGIALTLllalllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFL 292
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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