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Conserved domains on  [gi|481023838|ref|WP_001295318|]
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MULTISPECIES: 5-(carboxyamino)imidazole ribonucleotide mutase [Enterobacteriaceae]

Protein Classification

AIR carboxylase family protein( domain architecture ID 10000490)

AIR carboxylase family protein such as phosphoribosylaminoimidazole carboxylase, which catalyzes the reversible conversion of 5-aminoimidazole ribonucleotide (AIR) and carbon dioxide to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR), and to N5-CAIR mutase, which catalyzes the conversion of N5-CAIR to CAIR

Gene Ontology:  GO:0006164|GO:0003824
PubMed:  10574791
SCOP:  4003688

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PurE COG0041
Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; ...
8-166 1.18e-80

Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase is part of the Pathway/BioSystem: Purine biosynthesis


:

Pssm-ID: 439811  Cd Length: 161  Bit Score: 235.72  E-value: 1.18e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838   8 ARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVP 87
Cdd:COG0041    1 PKVGIIMGSDSDWPTMKKAAKILDEFGIPYEVRVVSAHRTPDRLFEYAKTAEERGLKVIIAGAGGAAHLPGMVAAKTTLP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838  88 VLGVPVQSAALSGVDSLYSIVQMPRGIPVGT----------------LaigkagaanaallaaqilATHDKELHQRLNDW 151
Cdd:COG0041   81 VIGVPVKSKALDGLDSLLSIVQMPPGVPVATvaiggaknaallaaqiL------------------ALKDPELAEKLKAY 142
                        170
                 ....*....|....*
gi 481023838 152 RKAQTDEVLENPDPR 166
Cdd:COG0041  143 REEQTEKVLAKDEEL 157
 
Name Accession Description Interval E-value
PurE COG0041
Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; ...
8-166 1.18e-80

Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 439811  Cd Length: 161  Bit Score: 235.72  E-value: 1.18e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838   8 ARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVP 87
Cdd:COG0041    1 PKVGIIMGSDSDWPTMKKAAKILDEFGIPYEVRVVSAHRTPDRLFEYAKTAEERGLKVIIAGAGGAAHLPGMVAAKTTLP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838  88 VLGVPVQSAALSGVDSLYSIVQMPRGIPVGT----------------LaigkagaanaallaaqilATHDKELHQRLNDW 151
Cdd:COG0041   81 VIGVPVKSKALDGLDSLLSIVQMPPGVPVATvaiggaknaallaaqiL------------------ALKDPELAEKLKAY 142
                        170
                 ....*....|....*
gi 481023838 152 RKAQTDEVLENPDPR 166
Cdd:COG0041  143 REEQTEKVLAKDEEL 157
purE TIGR01162
phosphoribosylaminoimidazole carboxylase, PurE protein; Phosphoribosylaminoimidazole ...
10-166 1.45e-68

phosphoribosylaminoimidazole carboxylase, PurE protein; Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 273474  Cd Length: 156  Bit Score: 205.16  E-value: 1.45e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838   10 VAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVL 89
Cdd:TIGR01162   1 VGIIMGSDSDLPTMKKAADILEEFGIPYELRVVSAHRTPELMLEYAKTAEERGIKVIIAGAGGAAHLPGMVAALTPLPVI 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 481023838   90 GVPVQSAALSGVDSLYSIVQMPRGIPVGTLaiGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPR 166
Cdd:TIGR01162  81 GVPVPSKALSGLDSLLSIVQMPSGVPVATV--AIGNAGNAALLAAQILGIKDPELAEKLKEYRENQKEEVLKKNKKL 155
AIRC smart01001
AIR carboxylase; Members of this family catalyse the decarboxylation of 1-(5-phosphoribosyl) ...
8-159 1.82e-68

AIR carboxylase; Members of this family catalyse the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyse the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.


Pssm-ID: 214965  Cd Length: 152  Bit Score: 204.69  E-value: 1.82e-68
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838     8 ARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVP 87
Cdd:smart01001   1 PLVGIIMGSTSDLPVMEEAAKTLEEFGIPYEVGVASAHRTPDRLFEYAKEAEDRGIKVIIAGAGGAAHLPGVVAALTTLP 80
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 481023838    88 VLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEV 159
Cdd:smart01001  81 VIGVPVSSGYLGGLDSLLSIVQMPSGIPVATVAIGIDGAFNAALLAAQILALNDPELAAKLAAYRINQTEEV 152
AIRC pfam00731
AIR carboxylase; Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl) ...
10-158 2.43e-68

AIR carboxylase; Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.


Pssm-ID: 459917  Cd Length: 147  Bit Score: 204.14  E-value: 2.43e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838   10 VAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVL 89
Cdd:pfam00731   1 VGIIMGSDSDLPVMKKAAKILKEFGIPYEVRVVSAHRTPERLLEYAKEAEERGLKVIIAGAGGAAHLPGMVAALTTLPVI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838   90 GVPVQSAALSGVDSLYSIVQMPRGIPVGT----------------LaigkagaanaallaaqilATHDKELHQRLNDWRK 153
Cdd:pfam00731  81 GVPVKSSALDGLDSLLSIVQMPSGVPVATvaiggaknaallaaqiL------------------ALSDPELAEKLKEYRE 142

                  ....*
gi 481023838  154 AQTDE 158
Cdd:pfam00731 143 EMAEK 147
PLN02948 PLN02948
phosphoribosylaminoimidazole carboxylase
7-118 8.11e-56

phosphoribosylaminoimidazole carboxylase


Pssm-ID: 178534 [Multi-domain]  Cd Length: 577  Bit Score: 184.11  E-value: 8.11e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838   7 PARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLV 86
Cdd:PLN02948 410 TPLVGIIMGSDSDLPTMKDAAEILDSFGVPYEVTIVSAHRTPERMFSYARSAHSRGLQVIIAGAGGAAHLPGMVASMTPL 489
                         90       100       110
                 ....*....|....*....|....*....|..
gi 481023838  87 PVLGVPVQSAALSGVDSLYSIVQMPRGIPVGT 118
Cdd:PLN02948 490 PVIGVPVKTSHLDGLDSLLSIVQMPRGVPVAT 521
 
Name Accession Description Interval E-value
PurE COG0041
Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; ...
8-166 1.18e-80

Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 439811  Cd Length: 161  Bit Score: 235.72  E-value: 1.18e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838   8 ARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVP 87
Cdd:COG0041    1 PKVGIIMGSDSDWPTMKKAAKILDEFGIPYEVRVVSAHRTPDRLFEYAKTAEERGLKVIIAGAGGAAHLPGMVAAKTTLP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838  88 VLGVPVQSAALSGVDSLYSIVQMPRGIPVGT----------------LaigkagaanaallaaqilATHDKELHQRLNDW 151
Cdd:COG0041   81 VIGVPVKSKALDGLDSLLSIVQMPPGVPVATvaiggaknaallaaqiL------------------ALKDPELAEKLKAY 142
                        170
                 ....*....|....*
gi 481023838 152 RKAQTDEVLENPDPR 166
Cdd:COG0041  143 REEQTEKVLAKDEEL 157
purE TIGR01162
phosphoribosylaminoimidazole carboxylase, PurE protein; Phosphoribosylaminoimidazole ...
10-166 1.45e-68

phosphoribosylaminoimidazole carboxylase, PurE protein; Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 273474  Cd Length: 156  Bit Score: 205.16  E-value: 1.45e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838   10 VAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVL 89
Cdd:TIGR01162   1 VGIIMGSDSDLPTMKKAADILEEFGIPYELRVVSAHRTPELMLEYAKTAEERGIKVIIAGAGGAAHLPGMVAALTPLPVI 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 481023838   90 GVPVQSAALSGVDSLYSIVQMPRGIPVGTLaiGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPR 166
Cdd:TIGR01162  81 GVPVPSKALSGLDSLLSIVQMPSGVPVATV--AIGNAGNAALLAAQILGIKDPELAEKLKEYRENQKEEVLKKNKKL 155
AIRC smart01001
AIR carboxylase; Members of this family catalyse the decarboxylation of 1-(5-phosphoribosyl) ...
8-159 1.82e-68

AIR carboxylase; Members of this family catalyse the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyse the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.


Pssm-ID: 214965  Cd Length: 152  Bit Score: 204.69  E-value: 1.82e-68
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838     8 ARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVP 87
Cdd:smart01001   1 PLVGIIMGSTSDLPVMEEAAKTLEEFGIPYEVGVASAHRTPDRLFEYAKEAEDRGIKVIIAGAGGAAHLPGVVAALTTLP 80
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 481023838    88 VLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEV 159
Cdd:smart01001  81 VIGVPVSSGYLGGLDSLLSIVQMPSGIPVATVAIGIDGAFNAALLAAQILALNDPELAAKLAAYRINQTEEV 152
AIRC pfam00731
AIR carboxylase; Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl) ...
10-158 2.43e-68

AIR carboxylase; Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.


Pssm-ID: 459917  Cd Length: 147  Bit Score: 204.14  E-value: 2.43e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838   10 VAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVL 89
Cdd:pfam00731   1 VGIIMGSDSDLPVMKKAAKILKEFGIPYEVRVVSAHRTPERLLEYAKEAEERGLKVIIAGAGGAAHLPGMVAALTTLPVI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838   90 GVPVQSAALSGVDSLYSIVQMPRGIPVGT----------------LaigkagaanaallaaqilATHDKELHQRLNDWRK 153
Cdd:pfam00731  81 GVPVKSSALDGLDSLLSIVQMPSGVPVATvaiggaknaallaaqiL------------------ALSDPELAEKLKEYRE 142

                  ....*
gi 481023838  154 AQTDE 158
Cdd:pfam00731 143 EMAEK 147
PLN02948 PLN02948
phosphoribosylaminoimidazole carboxylase
7-118 8.11e-56

phosphoribosylaminoimidazole carboxylase


Pssm-ID: 178534 [Multi-domain]  Cd Length: 577  Bit Score: 184.11  E-value: 8.11e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 481023838   7 PARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLV 86
Cdd:PLN02948 410 TPLVGIIMGSDSDLPTMKDAAEILDSFGVPYEVTIVSAHRTPERMFSYARSAHSRGLQVIIAGAGGAAHLPGMVASMTPL 489
                         90       100       110
                 ....*....|....*....|....*....|..
gi 481023838  87 PVLGVPVQSAALSGVDSLYSIVQMPRGIPVGT 118
Cdd:PLN02948 490 PVIGVPVKTSHLDGLDSLLSIVQMPRGVPVAT 521
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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