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Conserved domains on  [gi|47589437|gb|AAT36111|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Lepilemur mustelinus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.10e-68

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 201.32  E-value: 1.10e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437    1 MNFPLTLMTDTLLIMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 47589437   81 TNNLKLTLTMALTVISILAAGLTYEWLQKGLEWEE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.10e-68

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 201.32  E-value: 1.10e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437    1 MNFPLTLMTDTLLIMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 47589437   81 TNNLKLTLTMALTVISILAAGLTYEWLQKGLEWEE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 2.66e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 103.66  E-value: 2.66e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437    18 VMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLT-LTMALTVIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 47589437    97 ILAAGLTYEWLQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-113 7.17e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.86  E-value: 7.17e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437   3 FPLTLMTDTLLIMILVM--VAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQ 80
Cdd:COG0838   6 LPILIFLLVALGLALAMllLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVV 83

                        90       100       110
                ....*....|....*....|....*....|....
gi 47589437  81 TNNLKLT-LTMALTVISILAAGLTYEWLQKGLEW 113
Cdd:COG0838  84 FRELGWFgLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.10e-68

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 201.32  E-value: 1.10e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437    1 MNFPLTLMTDTLLIMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 47589437   81 TNNLKLTLTMALTVISILAAGLTYEWLQKGLEWEE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 9.67e-50

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 153.54  E-value: 9.67e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437    1 MNFPLTLMTDTLLI-MILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAT 79
Cdd:MTH00136   1 MNLITTILTITIALsLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 47589437   80 QTNNLKLTLTMALTVISILAAGLTYEWLQKGLEWEE 115
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 5-115 7.72e-48

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 148.60  E-value: 7.72e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437    5 LTLMTDTLLIMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNL 84
Cdd:MTH00069   4 LMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTP 83

                         90       100       110
                 ....*....|....*....|....*....|.
gi 47589437   85 KLTLTMALTVISILAAGLTYEWLQKGLEWEE 115
Cdd:MTH00069  84 TNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-113 5.23e-44

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 138.86  E-value: 5.23e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437    1 MNFPLTLMTDTLLIMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 47589437   81 TNNLKLTLTMALTVISILAAGLTYEWLQKGLEW 113
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 3.31e-36

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 119.32  E-value: 3.31e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437    1 MNFPLTLMTDTLLIMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQ 80
Cdd:MTH00042   2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 47589437   81 TNNLKLTLTMALTVISILAAGLTYEWLQKGLEWEE 115
Cdd:MTH00042  82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 12-113 1.47e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 112.68  E-value: 1.47e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437   12 LLIMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNlkLTLTMA 91
Cdd:MTH00203  13 LLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSS--LSLLLA 90

                         90       100
                 ....*....|....*....|..
gi 47589437   92 LTVISILAAGLTYEWLQKGLEW 113
Cdd:MTH00203  91 FLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 2.66e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 103.66  E-value: 2.66e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437    18 VMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLT-LTMALTVIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 47589437    97 ILAAGLTYEWLQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 5-113 5.92e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 95.61  E-value: 5.92e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437    5 LTLMTDTLLIMILVMVAFWL--PQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTN 82
Cdd:MTH00161   3 LIILLIILLISIILMILASLlsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTS 82

                         90       100       110
                 ....*....|....*....|....*....|.
gi 47589437   83 NLKLTLTMALTVISILAAGLTYEWLQKGLEW 113
Cdd:MTH00161  83 NMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 2.12e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 94.54  E-value: 2.12e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437    1 MNFPLTLMTDTLLIMILVMVAFWLPQLNVY-TEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAT 79
Cdd:MTH00148   2 LSILLSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 47589437   80 QTNNLKLTLTMALTVISILAAGLTYEWLQKGLEWEE 115
Cdd:MTH00148  82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 7-113 7.19e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 85.43  E-value: 7.19e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437    7 LMTDTLLIMILVMVAFWLPQLNVYT-EKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLK 85
Cdd:MTH00202   8 SILSILISSLLFLVSWMLSFRSLMDrEKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSK 87

                         90       100
                 ....*....|....*....|....*...
gi 47589437   86 LTLTMALTVISILAAGLTYEWLQKGLEW 113
Cdd:MTH00202  88 GGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 31-114 3.02e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 83.99  E-value: 3.02e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437   31 TEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQTNNLKLTLTMALTVIsILAAGLTYEWLQKG 110
Cdd:MTH00055  36 SEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFLI-ILTIGLIYEWVKGG 114


                 ....
gi 47589437  111 LEWE 114
Cdd:MTH00055 115 LEWE 118
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-113 7.17e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.86  E-value: 7.17e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437   3 FPLTLMTDTLLIMILVM--VAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQ 80
Cdd:COG0838   6 LPILIFLLVALGLALAMllLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVV 83

                        90       100       110
                ....*....|....*....|....*....|....
gi 47589437  81 TNNLKLT-LTMALTVISILAAGLTYEWLQKGLEW 113
Cdd:COG0838  84 FRELGWFgLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-113 7.22e-22

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 82.98  E-value: 7.22e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437    1 MNFPLTLMTDTLLIMILVMVAFWL--PQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVlaARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 47589437   79 TQTNNLKLTLTMALTVISILAAGLTYEWLQKGLEW 113
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 32-114 4.61e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 78.37  E-value: 4.61e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437   32 EKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKLT-LTMALTVISILAAGLTYEWLQKG 110
Cdd:PRK06602  40 EKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGWLgFVEAMIFILVLLVGLVYLWRKGA 117


                 ....
gi 47589437  111 LEWE 114
Cdd:PRK06602 118 LDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-114 2.14e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 76.64  E-value: 2.14e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437    1 MNFPLTLMTDTLLIMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQ 80
Cdd:MTH00018   1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVL 78

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 47589437   81 TNNLKL--TLTMALTVIsILAAGLTYEWLQKGLEWE 114
Cdd:MTH00018  79 YNQIAPfgFWTMVGFLF-ILTLGLIYEWIKGGLEWE 113
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 13-114 2.51e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 74.20  E-value: 2.51e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437   13 LIMILVMVAFWLPQLNVY-----TEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKL- 86
Cdd:MTH00030  18 IILLLVSISFTLGNSRIGltkpdSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLf 95

                         90       100
                 ....*....|....*....|....*...
gi 47589437   87 TLTMALTVISILAAGLTYEWLQKGLEWE 114
Cdd:MTH00030  96 SFWIVYTFLIVLAIGLAYEWIKGGLEWD 123
ndhC CHL00022
NADH dehydrogenase subunit 3
 12-113 5.56e-13

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 60.39  E-value: 5.56e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437   12 LLIMILV-MVAFWLPQL----NVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKL 86
Cdd:CHL00022  14 LIISSLIpILAFLISGLlapiSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGV 91

                         90       100
                 ....*....|....*....|....*...
gi 47589437   87 TLTM-ALTVISILAAGLTYEWLQKGLEW 113
Cdd:CHL00022  92 SAFIeALIFVLILIVGLVYAWRKGALEW 119
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-114 1.39e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 53.91  E-value: 1.39e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437   33 KYKPYECGFDPMGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWATQTNNLKL--TLTMALTVISILAAgLTYEWLQ 108
Cdd:PRK07928  37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVfgLVEMALFMLTVFVA-YAYVWRR 113


                 ....*.
gi 47589437  109 KGLEWE 114
Cdd:PRK07928 114 GGLEWD 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-113 2.59e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 50.90  E-value: 2.59e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437   32 EKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPlpWATQTNNLKL-TLTMALTVISILAAGLTYEWLQKG 110
Cdd:PRK07756  41 AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGLfALIEMLIFVVMLLVGLAYAWKKKV 118


                 ...
gi 47589437  111 LEW 113
Cdd:PRK07756 119 LQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 12-73 1.09e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 46.43  E-value: 1.09e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47589437   12 LLIMILVMVAFWLPQLNVYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLL 73
Cdd:MTH00092  13 LLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
31-114 1.10e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 41.58  E-value: 1.10e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589437   31 TEKYK--PYECGFDPMGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWATQTNNLKL-TLTMALTVISILAAGLTYEWL 107
Cdd:PRK08489  43 TEKLKlaIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLLGLfGLIEMLLFIVLLTIGFIYAWK 119


                 ....*..
gi 47589437  108 QKGLEWE 114
Cdd:PRK08489 120 KGALEWQ 126
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 34-76 2.37e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.57  E-value: 2.37e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 47589437   34 YKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060  38 VSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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