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Conserved domains on  [gi|47589013|gb|AAT36040|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Lepilemur microdon]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 3.52e-68

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 200.17  E-value: 3.52e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013    1 MNFPLTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 47589013   81 TDNLKLTLTTALMLISILAAGLTYEWFQKGLEWEE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 3.52e-68

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 200.17  E-value: 3.52e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013    1 MNFPLTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 47589013   81 TDNLKLTLTTALMLISILAAGLTYEWFQKGLEWEE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 2.91e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 103.66  E-value: 2.91e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013    18 VTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNLKLT-LTTALMLIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 47589013    97 ILAAGLTYEWFQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 5-113 6.55e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.56  E-value: 6.55e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013   5 LTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNL 84
Cdd:COG0838  10 IFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFREL 87

                        90       100       110
                ....*....|....*....|....*....|
gi 47589013  85 KLT-LTTALMLISILAAGLTYEWFQKGLEW 113
Cdd:COG0838  88 GWFgLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 3.52e-68

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 200.17  E-value: 3.52e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013    1 MNFPLTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 47589013   81 TDNLKLTLTTALMLISILAAGLTYEWFQKGLEWEE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 2.47e-46

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 145.06  E-value: 2.47e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013    1 MNFPLTLITDALLVTT-LVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAI 79
Cdd:MTH00136   1 MNLITTILTITIALSLiLAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 47589013   80 QTDNLKLTLTTALMLISILAAGLTYEWFQKGLEWEE 115
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 5-115 3.49e-45

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 142.06  E-value: 3.49e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013    5 LTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTDNL 84
Cdd:MTH00069   4 LMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTP 83

                         90       100       110
                 ....*....|....*....|....*....|.
gi 47589013   85 KLTLTTALMLISILAAGLTYEWFQKGLEWEE 115
Cdd:MTH00069  84 TNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-113 4.09e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 134.24  E-value: 4.09e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013    1 MNFPLTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 47589013   81 TDNLKLTLTTALMLISILAAGLTYEWFQKGLEW 113
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 2.43e-34

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 114.69  E-value: 2.43e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013    1 MNFPLTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQ 80
Cdd:MTH00042   2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 47589013   81 TDNLKLTLTTALMLISILAAGLTYEWFQKGLEWEE 115
Cdd:MTH00042  82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 11-113 6.44e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 110.76  E-value: 6.44e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013   11 ALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTDNLKLTLtt 90
Cdd:MTH00203  12 LLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSLSLLL-- 89

                         90       100
                 ....*....|....*....|...
gi 47589013   91 ALMLISILAAGLTYEWFQKGLEW 113
Cdd:MTH00203  90 AFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 2.91e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 103.66  E-value: 2.91e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013    18 VTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNLKLT-LTTALMLIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 47589013    97 ILAAGLTYEWFQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 4.31e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 93.77  E-value: 4.31e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013    1 MNFPLTLITDALLVTTLVTIAFWMPQLNIY-TEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAI 79
Cdd:MTH00148   2 LSILLSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 47589013   80 QTDNLKLTLTTALMLISILAAGLTYEWFQKGLEWEE 115
Cdd:MTH00148  82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 32-113 5.24e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 93.30  E-value: 5.24e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013   32 EKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTDNLKLTLTTALMLISILAAGLTYEWFQKGL 111
Cdd:MTH00161  32 EKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQGAL 111


                 ..
gi 47589013  112 EW 113
Cdd:MTH00161 112 EW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 11-113 2.79e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 91.59  E-value: 2.79e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013   11 ALLVTTLVTIAFWM--PQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTDNLKLTL 88
Cdd:MTH00202  11 SILISSLLFLVSWMlsFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGL 90

                         90       100
                 ....*....|....*....|....*
gi 47589013   89 TTALMLISILAAGLTYEWFQKGLEW 113
Cdd:MTH00202  91 LGGTIFLLILIGGLIHEWKEGSLDW 115
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 5-113 6.55e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.56  E-value: 6.55e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013   5 LTLITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNL 84
Cdd:COG0838  10 IFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFREL 87

                        90       100       110
                ....*....|....*....|....*....|
gi 47589013  85 KLT-LTTALMLISILAAGLTYEWFQKGLEW 113
Cdd:COG0838  88 GWFgLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 32-113 1.44e-22

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 84.91  E-value: 1.44e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013   32 EKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTDNLKLTLTTALMLISILAAGLTYEWFQKGL 111
Cdd:MTH00012  34 EKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIHEWREGSL 113


                 ..
gi 47589013  112 EW 113
Cdd:MTH00012 114 DW 115
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 31-114 2.87e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 81.68  E-value: 2.87e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013   31 TEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTDNLKLTLTTALMLIsILAAGLTYEWFQKG 110
Cdd:MTH00055  36 SEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFLI-ILTIGLIYEWVKGG 114


                 ....
gi 47589013  111 LEWE 114
Cdd:MTH00055 115 LEWE 118
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 32-114 5.67e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 78.37  E-value: 5.67e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013   32 EKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNLKLT-LTTALMLISILAAGLTYEWFQKG 110
Cdd:PRK06602  40 EKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGWLgFVEAMIFILVLLVGLVYLWRKGA 117


                 ....
gi 47589013  111 LEWE 114
Cdd:PRK06602 118 LDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 32-114 2.65e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 73.94  E-value: 2.65e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013   32 EKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNLKL-TLTTALMLISILAAGLTYEWFQKG 110
Cdd:MTH00018  32 EKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVLYNQIAPfGFWTMVGFLFILTLGLIYEWIKGG 109


                 ....
gi 47589013  111 LEWE 114
Cdd:MTH00018 110 LEWE 113
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 31-114 7.57e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 70.35  E-value: 7.57e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013   31 TEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNLKL-TLTTALMLISILAAGLTYEWFQK 109
Cdd:MTH00030  41 SEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLfSFWIVYTFLIVLAIGLAYEWIKG 118


                 ....*
gi 47589013  110 GLEWE 114
Cdd:MTH00030 119 GLEWD 123
ndhC CHL00022
NADH dehydrogenase subunit 3
 12-113 1.41e-12

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 59.23  E-value: 1.41e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013   12 LLVTTLVTI-AFWMPQL----NIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNLKL 86
Cdd:CHL00022  14 LIISSLIPIlAFLISGLlapiSKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGV 91

                         90       100
                 ....*....|....*....|....*...
gi 47589013   87 -TLTTALMLISILAAGLTYEWFQKGLEW 113
Cdd:CHL00022  92 sAFIEALIFVLILIVGLVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
7-113 8.54e-11

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 54.75  E-value: 8.54e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013    7 LITDALLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPlpWAIQTDNLKL 86
Cdd:PRK07756  16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGL 93

                         90       100
                 ....*....|....*....|....*...
gi 47589013   87 -TLTTALMLISILAAGLTYEWFQKGLEW 113
Cdd:PRK07756  94 fALIEMLIFVVMLLVGLAYAWKKKVLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-114 2.45e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 53.52  E-value: 2.45e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013   33 KYKPYECGFDPMGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWAIQTDNLKL--TLTTALMLISILAAgLTYEWFQ 108
Cdd:PRK07928  37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVfgLVEMALFMLTVFVA-YAYVWRR 113


                 ....*.
gi 47589013  109 KGLEWE 114
Cdd:PRK07928 114 GGLEWD 119
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 12-113 2.36e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 45.66  E-value: 2.36e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013   12 LLVTTLVTIAFWMPQLNIYTEKYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLpwaIQTDNLKLTLTta 91
Cdd:MTH00092  13 LLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL---LVSDFSSLISF-- 87

                         90       100
                 ....*....|....*....|..
gi 47589013   92 LMLISILAAGLTYEWFQKGLEW 113
Cdd:MTH00092  88 FMLMIFIFFGFYMEWWYGKLIW 109
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
31-114 7.40e-07

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 44.66  E-value: 7.40e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47589013   31 TEKYK--PYECGFDPMGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWAIQTDNLKL-TLTTALMLISILAAGLTYEWF 107
Cdd:PRK08489  43 TEKLKlaIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLLGLfGLIEMLLFIVLLTIGFIYAWK 119


                 ....*..
gi 47589013  108 QKGLEWE 114
Cdd:PRK08489 120 KGALEWQ 126
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 34-76 2.20e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.57  E-value: 2.20e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 47589013   34 YKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060  38 VSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
PRK06073 PRK06073
NADH dehydrogenase subunit A; Validated
 33-104 6.92e-03

NADH dehydrogenase subunit A; Validated


Pssm-ID: 235690  Cd Length: 124  Bit Score: 33.81  E-value: 6.92e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47589013   33 KYKPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQTDNLKLTLTTALMLIsILAAGLTY 104
Cdd:PRK06073  40 KVSRYEAGNPPTGPAKLWLPMQYYGYLLLFLTLEPIVVLLLLIAFAPYYTFRDLLLLIVVALV-LMYPVLYY 110
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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