|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 732.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 1 MLKIIMPTAMLLPVTWYSTNPMIWINITLHSLTISLVSLLLFKQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTVMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 81 QYHLTKESWERKKHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 161 LVALCHIQDSMGTLSLFMMTYWLQELPSSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 241 YGMMRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 321 LTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 47588962 401 LITATYSLYMLTTTQRGKPSYHTQNFSPSLTRENTLMSMHILPLLLLTLNPKILMGQTY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 599.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 1 MLKIIMPTAMLLPVTWYSTNPMIWINITLHSLTISLVSLLLFKQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTVMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 81 QYHLTKESWERKKHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 161 LVALCHIQDSMGTLSLFMMTYWLQELPSSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 241 YGMMRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 321 LTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNM 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 47588962 401 LITATYSLYMLTTTQRGKPSYHTQNFSPSLTRENTLMSMHILPLLLLTLNPKILMGQ 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 558.76 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 1 MLKIIMPTAMLLPVTWYSTNPMIWINITLHSLTISLVSLLLFKQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTVMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 81 QYHLTKESWERKKHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 161 LVALCHIQDSMGTLSLFMMTYWLQELPSSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 241 YGMMRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 321 LTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNM 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 47588962 401 LITATYSLYMLTTTQRGKPSYHTQNFSPSLTRENTLMSMHILPLLLLTLNPKILMG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
1.79e-168 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 481.76 E-value: 1.79e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 1 MLKIIMPTAMLLPVTWYSTNPMIWINITLHSLTISLVSLLLFKQ-ADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTVMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNlSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 80 SQYHLTKESWERKKHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 160 LLVALCHIQDSMGTLSLFMMTYWLQELPSSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 240 GYGMMRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 320 GLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 47588962 400 MLITATYSLYMLTTTQRGKPSYHTQNFSPSLTRENTLMSMHILPLLLLTLNPKILMG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
2.07e-159 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 458.25 E-value: 2.07e-159
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 3 KIIMPTAMLLPVTWYSTNPMIWINITLHSLTISLVSLLLFK-QADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTVMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKwSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 82 YHLTKESWERKKHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 162 VALCHIQDSMGTLSLFMMTYwlqELPSSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYF---SKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 242 GMMRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 322 TSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNML 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 47588962 402 ITATYSLYMLTTTQRGKPSYHTQNFSPSLTRENTLMSMHILPLLLLTLNPKIL 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
2.72e-142 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 415.14 E-value: 2.72e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 1 MLKIIMPTAMLLPVTWYSTNPMIWINITLHSLTISLVSLLLFkQADTNS--NNFSLTFFSDPLSSPLLILTTWLFPLTVM 78
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLL-NNHWSSswHNLSLSLATDSLSSPLIILSCWLAPLSLL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 79 ASQYHLTKESWERKKHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSL 158
Cdd:MTH00044 80 ASINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 159 PLLVALCHIQDSMGTLSLFMMTYWLQELPSSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKL 238
Cdd:MTH00044 160 PLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 239 GGYGMMRIIMILN-PLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMV 317
Cdd:MTH00044 240 GGYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMI 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 318 AHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTG 397
Cdd:MTH00044 320 AHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 47588962 398 LNMLITATYSLYMLTTTQRGKPSYHTQNFSPSLTRENTLMSMHILPLLLLTLNPKILM 455
Cdd:MTH00044 400 LATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-441 |
2.56e-113 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 340.59 E-value: 2.56e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 1 MLKIIMPTAMLLPVTWYSTNpmiWINITLHSLTISLVSLLLFKQaDTNSNNFSLTFFSDPLSSPLLILTTWLFPLTVMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNS---WWLVQSLLFLLSFLFMLLFSL-SFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 81 QyhLTKESWERKKHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00163 77 E--SVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 161 LVALCHIQDSMGTLSLFMMTYwlqelpSSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 241 YGMMRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 321 LTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNM 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 47588962 401 LITATYSLYMLTTTQRGKPSYHTQNFSPSLTRENTLMSMHI 441
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHW 429
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
37-441 |
1.01e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 335.66 E-value: 1.01e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 37 VSLLLFKQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTVMASQYHLTKESWERKkhFLSTLISLQLFLIMTFTATELI 116
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSS--FSLLVLLLCLILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 117 MFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMTYWLQELPSSWsnyLLW 196
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 197 TACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPLTKFMAYPFLMMCLWGMIMTSLIC 276
Cdd:MTH00150 156 LLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLIC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 277 LRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMN 356
Cdd:MTH00150 236 LRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 357 TWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTTQRGKPSYHTQNFSPSLTRENTL 436
Cdd:MTH00150 316 LWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLL 395
|
....*
gi 47588962 437 MSMHI 441
Cdd:MTH00150 396 LLLHW 400
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
21-455 |
1.30e-105 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 321.16 E-value: 1.30e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 21 PMIWINITLHSLTISLVSLLLFKQADTNSNNF-SLTFFSDPLSSPLLILTTWLFPLTVMASQYHLTKESweRKKHFLSTL 99
Cdd:MTH00205 17 KFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFiSSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNK--NSKLFTVSV 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 100 ISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMM 179
Cdd:MTH00205 95 IMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFN 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 180 TYWLQelpSSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPLTKFMAY 259
Cdd:MTH00205 175 FPLNF---SDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSE 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 260 PFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYERIHS 339
Cdd:MTH00205 252 LFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNS 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 340 RTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTTQRGKP 419
Cdd:MTH00205 332 RSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKV 411
|
410 420 430
....*....|....*....|....*....|....*.
gi 47588962 420 SYHTQNFSPSLTRENTLMSMHILPLLLLTLNPKILM 455
Cdd:MTH00205 412 SSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
2.30e-105 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 320.53 E-value: 2.30e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 1 MLKIIMPTAMLLPVTWYsTNPMIWINITLHSLTISLVSLLLFKQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTVMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLI-KYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 81 qyHLTKESWERKKHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00014 80 --FKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 161 LVALCHIQDSMGTLSLFMMTYWLqelPSSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEP---PSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 241 YGMMRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 321 LTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNM 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 47588962 401 LITATYSLYMLTTTQRGKPSYHTQNFSPSLTRENTLMSMHILPLLLLTLNPKIL 454
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
36-411 |
8.12e-76 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 245.38 E-value: 8.12e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 36 LVSLLLFKQADTNSNNFSLTFFS--------------DPLSSPLLILTTWLFPLTVMASqyhlTKESWERKKHFLSTLIS 101
Cdd:COG1008 44 LLSLYLLAGFDPGTGGFQFVESYpwipslgisyhlgvDGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLL 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 102 LQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQtERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSlFMMTY 181
Cdd:COG1008 120 LEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGE-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALT-FDIAE 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 182 WLQELPSSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPL-TKFMAYP 260
Cdd:COG1008 198 LAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 261 FLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYERIHSR 340
Cdd:COG1008 278 LAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTR 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47588962 341 TMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYML 411
Cdd:COG1008 358 DIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
31-420 |
4.16e-71 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 232.91 E-value: 4.16e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 31 SLTISLVSLLLFKQADTNSNNFSLTFFS--------------DPLSSPLLILTTWLFPLTVMASQYHLTKesweRKKHFL 96
Cdd:TIGR01972 34 ALATLLLSLLLLFQFDPTGSGFQFTEDIpwipalgisyhlgvDGISLLLVLLTALLTLLAILASWESIQK----RVKEFY 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 97 STLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTeRLNAGLYFLFYTLAGSLPLLVALCHIQ-DSMGTLS 175
Cdd:TIGR01972 110 ALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFD 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 176 LfmmTYWLQELPSSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNP-LT 254
Cdd:TIGR01972 189 L---LELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdAS 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 255 KFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNY 334
Cdd:TIGR01972 266 LYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLY 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 335 ERIHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTT 414
Cdd:TIGR01972 346 ERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRV 425
|
....*.
gi 47588962 415 QRGKPS 420
Cdd:TIGR01972 426 FFGELS 431
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
36-410 |
5.22e-70 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 230.47 E-value: 5.22e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 36 LVSLLLFKQADTNSNNFSLTFFS--------------DPLSSPLLILTTWLFPLTVMASqyhlTKESWERKKHFLSTLIS 101
Cdd:PRK05846 44 LLSLVLWIGFDSSNAGFQFVEKHpwiprfgisyhlgvDGISLLLVVLTALLTPLAVLAS----WEEIKKRVKFYMAALLW 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 102 LQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGnQTERLNAGLYFLFYTLAGSLPLLVALC----HIQDSMGTLSLf 177
Cdd:PRK05846 120 LEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG-GKNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDI- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 178 mmTYWLQELPSSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPL-TKF 256
Cdd:PRK05846 198 --ADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHE 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 257 MAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYER 336
Cdd:PRK05846 276 FAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDR 355
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47588962 337 IHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYM 410
Cdd:PRK05846 356 LHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWL 429
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
53-432 |
3.49e-68 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 225.33 E-value: 3.49e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 53 SLTFFSDPLSSPLLILTTWLFPLTVMASQ---YHLTKEswerkkhFLSTLISLQLFLIMTFTATELIMFYILFESTLIPT 129
Cdd:MTH00204 76 PLVFAVDGVSLFFILLTTLLIPICILISWksiKFLFKE-------FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 130 LIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMTywLQELPSSWSNYLLwTACIMAFMVKMPL 209
Cdd:MTH00204 149 FLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILL--NIKLPLSIQKWLL-VGFFLSLAVKIPQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 210 YGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPLTKFMAYPF-LMMCLWGMIMTSLICLRQTDLKSLIAY 288
Cdd:MTH00204 226 IPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLiVMLSVIAVIYGSLTTCRQVDFKRLIAY 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 289 SSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLA 368
Cdd:MTH00204 306 SSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMG 385
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47588962 369 LPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTTQRGKPSYHTQnFSPSLTR 432
Cdd:MTH00204 386 FPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLL-FSRDLNR 448
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
53-432 |
2.14e-67 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 223.01 E-value: 2.14e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 53 SLTFFSDPLSSPLLILTTWLFPLTVMASqyhltkesWERK----KHFLSTLISLQLFLIMTFTATELIMFYILFESTLIP 128
Cdd:MTH00217 73 PVVFAVDGISIFFLILTALLTPICILIS--------WNSIkfliKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIP 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 129 TLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSlfMMTYWLQELPSSWsNYLLWTACIMAFMVKMP 208
Cdd:MTH00217 145 MFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTD--YQALCCLKIEKEL-QYFIFLGFFLSLAIKIP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 209 LYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPL-TKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIA 287
Cdd:MTH00217 222 KIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEaSEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 288 YSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNL 367
Cdd:MTH00217 302 YSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANA 381
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47588962 368 ALPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTTQRGKPSYHTqNFSPSLTR 432
Cdd:MTH00217 382 SIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYL-YFSRDLNR 445
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
1.47e-63 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 207.17 E-value: 1.47e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 112 ATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMTYWLQELPSSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 192 NYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPLTKFMAYPFLMMCLWGMIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 272 TSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANS-NYERIHSRTMLLARGLQA 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 47588962 351 LLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTGL 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
54-420 |
1.51e-59 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 203.23 E-value: 1.51e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 54 LTFFSDPLSSPLLILTTWLFPLTVMASQYHLTKESwerkKHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIII 133
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWHSVKYLT----KSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 134 TRWGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGT---LSLFMMTYWLQELPSSWsnylLWTACIMAFMVKMPLY 210
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTtdyLTLASCSHVVSEQTQKW----IFLGIFLAMAVKIPIF 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 211 GLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPL-TKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYS 289
Cdd:MTH00226 248 PFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYS 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 290 SISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLAL 369
Cdd:MTH00226 328 SVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAV 407
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 47588962 370 PPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTTQRGKPS 420
Cdd:MTH00226 408 PPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPG 458
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
102-418 |
2.45e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 159.69 E-value: 2.45e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 102 LQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALCHiqdsmgtlSLFMMTY 181
Cdd:MTH00094 71 LILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK--------NFFFFSL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 182 WLQELPSSWSNYLLwtaCIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRiimILNPLTKFMAYPF 261
Cdd:MTH00094 143 CYFDFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR---ILGSLNFVYNNFW 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 262 LMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYERIHSRT 341
Cdd:MTH00094 217 IIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRL 296
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47588962 342 MLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTTQRGK 418
Cdd:MTH00094 297 IYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGK 373
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-411 |
1.96e-40 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 151.34 E-value: 1.96e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 59 DPLSSPLLILTTWLFPLTVMASqYHLTKESwerkKHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFAS-WKVTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 139 QtERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMTYWLQELPSSWSnYLLWTACIMAFMVKMPLYGLHMWLPK 218
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALE-LLLYAGFLIAFGVKLPIFPLHTWLPD 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 219 AHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPLTKFMAYPFLMMC-LWGMIMTSLICLRQTDLKSLIAYSSISHMALV 297
Cdd:PRK12561 211 AHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILgVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 298 TMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIG 377
Cdd:PRK12561 291 LLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 47588962 378 ELLV-----TMAAFSWS--NTTIILTGLNMLITATYSLYML 411
Cdd:PRK12561 371 ELTVflgitSSDVYSSTfrTITILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-387 |
1.23e-39 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 147.60 E-value: 1.23e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 1 MLKIIMP--TAMLLPVTWYSTNPMIWINItLHSLTISLVSLLLFKQADTN----------SNNFSLTFFSDPLSSPLLIL 68
Cdd:COG0651 6 ILPVLLPllAAALLLLLGRRRRLQRALSL-LASLALLALALALLLQVLAGgplvyalggwPAPFGIVLVADRLSALFLLL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 69 TTWLFPLTVMASQYHLtkeSWERKKHFLSTLISLQLF-LIMTFTATELIMFYILFESTLIPTLIIITRWGNQtERLNAGL 147
Cdd:COG0651 85 TALVALAVLLYSIGYM---RHERRGRRFYPLFLLLLAgMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK-EALRAGL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 148 YFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMTYWLQELPSSWSnYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAG 227
Cdd:COG0651 161 KYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLL-LAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 228 SMILAAILLKLGGYGMMRIIMILNP--LTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQT 305
Cdd:COG0651 240 SALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGT 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 306 PWSLMGATTLMVAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAA 385
Cdd:COG0651 320 PLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAA 399
|
..
gi 47588962 386 FS 387
Cdd:COG0651 400 LE 401
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
59-411 |
8.73e-36 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 138.29 E-value: 8.73e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 59 DPLSSPLLILTTWLFPLTVMASQyhltkESWERKKHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 139 QtERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMTYWLQELPSSwSNYLLWTACIMAFMVKMPLYGLHMWLPK 218
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 219 AHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPLTKFMAYPFLmmCLWGMIMT---SLICLRQTDLKSLIAYSSISHMA 295
Cdd:PRK06473 231 AHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWL--ATWAVVSVlygASCAIAQKDMKKMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 296 LVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYERIHSRTMLLARGL---QALLPLMNTWWLLASLSNLALPPS 372
Cdd:PRK06473 309 YILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGM 388
|
330 340 350
....*....|....*....|....*....|....*....
gi 47588962 373 INLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYML 411
Cdd:PRK06473 389 VGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLV 427
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
58-411 |
3.43e-34 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 134.06 E-value: 3.43e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 58 SDPLSSPLLILTTWLFPLTVMASqyhltkesWE---RKKHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIIT 134
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAA--------WPvtfKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 135 RWGNQtERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMTYWLQELPSSWSNyLLWTACIMAFMVKMPLYGLHM 214
Cdd:PRK02546 157 IWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQL-LCYAGLLIAYGVKLPIVPLHT 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 215 WLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPLTKFMAYPFLMMC-LWGMIMTSLICLRQTDLKSLIAYSSISH 293
Cdd:PRK02546 235 WLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLgVVNIIYAALTSFAQRNLKRKIAYSSISH 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 294 MALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSI 373
Cdd:PRK02546 315 MGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMS 394
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 47588962 374 NLIGELLV-----TMAAFSWSNTTII--LTGLNMLITATYSLYML 411
Cdd:PRK02546 395 GFVAELMVfvgfaTSDAYTLPFRVVVvfLAAVGVILTPIYLLSML 439
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
59-411 |
2.73e-31 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 125.44 E-value: 2.73e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 59 DPLSSPLLILTTWLFPLTVMASqYHLTKESweRKKHFLS-TLISLQlflIMTFTATELIMFYILFESTLIPTLIIITRWG 137
Cdd:CHL00011 83 DGLSIGPILLTGFITTLATLAA-WPVTRNS--RLFYFLMlAMYSGQ---IGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 138 NQtERLNAGLYFLFYTLAGSLPLLVALCHIQDSM-GTLSLFMMTYWLQELPSSWSnYLLWTACIMAFMVKMPLYGLHMWL 216
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGsNEPTLNFETLANQSYPVALE-ILFYIGFLIAYAVKLPIIPLHTWL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 217 PKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPLTKFMAYPFLMMC-LWGMIMTSLICLRQTDLKSLIAYSSISHMA 295
Cdd:CHL00011 235 PDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVgAIQIIYAASTSLGQRNLKKRIAYSSVSHMG 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 296 LVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYERIhsRTMLLAR--GLQALLPLMNTWWLLASLSNLALPPSI 373
Cdd:CHL00011 315 FIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASLALPGMS 392
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 47588962 374 NLIGELLV-----TMAAFSWSNTTII--LTGLNMLITATYSLYML 411
Cdd:CHL00011 393 GFVAELIVffgiiTSQKYLLMPKILItfVMAIGMILTPIYLLSML 437
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
59-435 |
3.50e-30 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 122.51 E-value: 3.50e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 59 DPLSSPLLILTTWLFPLTVMASQyhltkESWERKKHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 139 QtERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMTYWLQELPSSwSNYLLWTACIMAFMVKMPLYGLHMWLPK 218
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 219 AHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPLTKFMAYPFLmmCLWGMIMT---SLICLRQTDLKSLIAYSSISHMA 295
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGL--AIIGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 296 LVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYERIHSRTMLLARGLQAL---LPLMNTWWLLASLSNLALPPS 372
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGL 388
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47588962 373 INLIGELLVTMAAFSWSNTTIILTGLNMLITATYSLYMLTTTQRGKPSYHTQNFSPSLTRENT 435
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYYPKVLWSEKI 451
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-387 |
3.52e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 95.72 E-value: 3.52e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 53 SLTFFSDPLSSPLLILTTWLFPLTVMASQyhLTKESWERKKHFLsTLISLQLFLIMTFTATeLIMFYILFESTLIPTLII 132
Cdd:PRK08375 70 GIELRADSLSALFLLVTSILAIAALLYAI--GYGEHRQTRFYAL-FLLLLAGLLGALLTAD-LFNLFVFLEIMSLSSYAL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 133 ITRWGNQtERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMTYWLQELPsswsnyLLWTA---CIMAFMVKMPL 209
Cdd:PRK08375 146 VAMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENP------TVVTAfgfVLLALALKAAV 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 210 YGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPLTKF----MAYPFLMMCLWGMIMTSLICLRQTDLKSL 285
Cdd:PRK08375 219 FPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRfalgLGWLLAVLALLSMLVGSLAALGQDDVKRV 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 286 IAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLS 365
Cdd:PRK08375 299 LAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLS 378
|
330 340
....*....|....*....|..
gi 47588962 366 NLALPPSINLIGELLVTMAAFS 387
Cdd:PRK08375 379 LIGVPPTSGFVSKWYLVVGAVE 400
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-408 |
5.09e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 95.42 E-value: 5.09e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 27 ITLHSLTISLV----SLLLFKQADTNSN-----------NFSLTFFSDPLSSPLLILTTWLFPLTVMASQYHLTKESweR 91
Cdd:PRK12667 34 QKIYALLVSLItlilSILLFIQVYSSNKpivylfggwpaPIGIVYEVDLLGALLGLLTALVMFLILIYSYWYLEHES--G 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 92 KKHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSM 171
Cdd:PRK12667 112 PEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATF 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 172 GTL-----SLFMMTYWLQELPSSWSNYLLWTACIMA-----FMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGY 241
Cdd:PRK12667 192 GTLnmadlSAKIRGLSFPLTGGLAGNPPLALGVALAlalwaFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAY 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 242 GMMRIIMI-------LNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATT 314
Cdd:PRK12667 272 AIIRFLYTifgispsLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALF 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 315 LMVAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSnttII 394
Cdd:PRK12667 352 HIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESG---FY 428
|
410
....*....|....
gi 47588962 395 LTGLNMLITATYSL 408
Cdd:PRK12667 429 LPALVLLIASAISL 442
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
1.37e-20 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 86.42 E-value: 1.37e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 1 MLKIIMPTAMLLPVTWYSTNPMIWINITLHSLTISLVSLLLFKQADTNS-NNFSLTFFSDPLSSPLLILTTWLFPLTVMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSwSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 47588962 80 SQYHLTKESWERKKHFLSTLISLQLFLIMT 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-398 |
3.31e-17 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 83.83 E-value: 3.31e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 206 KMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMIL--NPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 284 SLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLAS 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190
....*....|....*....|....*....|....*...
gi 47588962 364 LSNLALPPSINLIGELLVTMAAFS---WSNTTIILTGL 398
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLL 424
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
104-344 |
1.06e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 78.81 E-value: 1.06e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 104 LFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMTYWL 183
Cdd:MTH00062 82 IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDD 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 184 QElpSSWSNYLLWtaciMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPLTKFMAYPFLM 263
Cdd:MTH00062 162 SV--SLIVYYVLS----FMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 264 MCLWGMIMTSLICLrqtDLKSLIAYSSISHMaLVTMAILIQTPWSLMGATTLM-VAHGLTSSVLFCLANSNYERIHSRTM 342
Cdd:MTH00062 236 LFSVFFLITACSEL---DGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFYEVSGSRNW 311
|
..
gi 47588962 343 LL 344
Cdd:MTH00062 312 VL 313
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
52-386 |
5.96e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 77.08 E-value: 5.96e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 52 FSLTFFSDPLSSPLLILTTWLFPLTVMASQYHLTKESWERKKHFLSTLISLQLF-LIMTFTATELIMFYILFESTLIPTL 130
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 131 IIITRWGNQTERLNAGLYFLFYTLAGSLPLLValchiqdsmGTLSLFMMTYWLQELPSSWSNYLLWTACIMAFM---VKM 207
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLML---------GIIVLFIQTGSFELSPLGASAGILSLVFLLLFLgfgIKA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 208 PLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILnpLTKFMAYPFLMMCLwGMIMTSL---ICLRQTDLKS 284
Cdd:PRK08667 220 GIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDV--LSPELWWGVLILLA-GSISALLgviYALKEHDLKG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 285 LIAYSSISHMALVTMAILIQTPWSLMGATTLM-----------VAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLP 353
Cdd:PRK08667 297 LLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMP 376
|
330 340 350
....*....|....*....|....*....|...
gi 47588962 354 LMNTWWLLASLSNLALPPSINLIGELLVTMAAF 386
Cdd:PRK08667 377 YTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-327 |
7.40e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 70.38 E-value: 7.40e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 95 FLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRwGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTL 174
Cdd:PRK12665 113 FLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTL 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 175 SLFMMTYWLQELPSSWSNyLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPlT 254
Cdd:PRK12665 192 NMADLAVRLDELPSGTRT-ALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-G 269
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47588962 255 KFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLF 327
Cdd:PRK12665 270 GGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF 342
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
102-327 |
7.45e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 70.17 E-value: 7.45e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 102 LQLFLIMTFTATELIMFYILFE-STLIPTLIIITRwgNQTERLNAGLYFLFYTLAG------SLPLLVALCHIQDSMGTL 174
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAElTTVFSAMLIAIL--SARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 175 SLFMMTYWLQELPSSWSnYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPLT 254
Cdd:PRK08676 189 NWTELAAHASLLSPSVL-GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSG 267
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47588962 255 KFMAYPFLMMCLwGMIMTSLIC---LRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLF 327
Cdd:PRK08676 268 AAEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLF 342
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
8.25e-13 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 70.41 E-value: 8.25e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 110 FTATELIMFYILFESTLIPTLIIITRwGNQTERLNAGLYFLFYTLaGSLPLLVALCHIQDSMGTLSLFMMTYWLQELPSS 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDFADISQGLINDTST 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 190 WSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGM---MRIIM---ILNPLTKFMAYP--- 260
Cdd:PRK08668 193 GFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFllvLYVLPgtkLFSEFGTYRGVPlfn 272
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47588962 261 FLMMCLWGM--IMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLF 327
Cdd:PRK08668 273 YILAWLGNIsiIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-339 |
2.81e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 68.44 E-value: 2.81e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 51 NFSLTFFSDPLSSpLLILTTWLfpLTVMASQYhltkeSWERKK--HFLSTLISLQLFLIMTFTATELIMFYILFESTLIP 128
Cdd:PRK07234 58 NFGVTLRADALSG-YFILTNAL--VTLAVIFY-----CWESAKtrFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIA 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 129 TLIIITrWGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLfmmtYWLQELPSSWSNYLlwtacIMAFMVKMP 208
Cdd:PRK07234 130 TFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAF----SGLATADPEAFALI-----ALGLLVKGG 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 209 LYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPLTKFMAYPFLMMCLWGmimtSLICLRQTDLKSLIAY 288
Cdd:PRK07234 200 IFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLAF 275
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 47588962 289 SSISHMALVTMAILIqtpwslmgATTLMVAHGLTSSVLFCLANSNYERIHS 339
Cdd:PRK07234 276 STISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSRNFT 318
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
111-420 |
4.65e-12 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 67.69 E-value: 4.65e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 111 TATELIMFYILFESTLIPTLIIITRWGNQtERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMtywlQELPSSw 190
Cdd:PRK06525 131 YSSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSAL----SGLHGS- 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 191 SNYLLWTACIMAFMVKMPLYGLHMWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRIIMILNPLTKFMAYPFLMMCLWGM 269
Cdd:PRK06525 205 LKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTL 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 270 IMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQ---TPWSLMGATTLMVAHGLTSSVLFCLANSNYERIHSRTMLLAR 346
Cdd:PRK06525 284 LYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLR 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 347 GLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSNTTIILTGLNMLITA------TYSLYMLTTTQRGKPS 420
Cdd:PRK06525 364 GVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIesvasfAWFLRWFGRVVFGEPS 443
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
16-411 |
1.35e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 66.38 E-value: 1.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 16 WYSTNPMIWINITLHSLTISLVSLLLFKQAD------TNSNNFSLTFFSDPLSSPLLILTTWLFPLTVMASQYHLTKESW 89
Cdd:PRK06589 33 DSFIRNFLLITISIFFFGNILLIDLLFLKGIraqfelMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNI 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 90 ERKKHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITrWGNQTERLNAGLYFL-FYTLAGSLPLLVALCHIQ 168
Cdd:PRK06589 113 DSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIG-HTRNNISLSGGYKYLkILMISALLLFLPAVILIY 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 169 DSMGTLSLFMMTYWlqelpsSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIM 248
Cdd:PRK06589 192 TKTGNLDFVSGGLF------SKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILL 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 249 I---LNPLTKF--MAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTS 323
Cdd:PRK06589 266 YifgLSYLQRIfaEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAK 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 324 SVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMAAFSWSN--TTIILTGLNML 401
Cdd:PRK06589 346 ICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQpwLSIIVMLVVIA 425
|
410
....*....|
gi 47588962 402 ITATYSLYML 411
Cdd:PRK06589 426 SSILSALYLL 435
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
104-327 |
1.59e-11 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 65.94 E-value: 1.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 104 LFLIMTFTATELIM------FYILFESTLIpTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLF 177
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 178 MmtywLQELPSSWSNYLL---WTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPLT 254
Cdd:PRK08377 192 H----IAQLAGTIDPTVAqvgLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNAN 267
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47588962 255 KFMAYPFLM--MCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLF 327
Cdd:PRK08377 268 GWSSVLKLViiMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLF 342
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-354 |
4.18e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 65.33 E-value: 4.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 115 LIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMtYWLQELPSSWSNYL 194
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSEL-LASGDVIREHPLYL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 195 LWTACIM--AFmVKMPLYGLHMWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRiimiLNPLTKFMAYPFLMMCLWG--- 268
Cdd:PRK12647 196 AILLLVLggAF-TKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGglt 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 269 MIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANSNYERIHSRTMLLARGL 348
Cdd:PRK12647 270 MLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGL 349
|
....*.
gi 47588962 349 QALLPL 354
Cdd:PRK12647 350 RRAMPI 355
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
27-327 |
8.37e-11 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 63.60 E-value: 8.37e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 27 ITLHSLTISLVsLLLFKQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTVMASQYHLTKESWERKKHFLSTLISLqLFL 106
Cdd:COG1007 38 LALLGLLLALA-LLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFAT-LGM 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 107 IMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGL-YFLFYTLAGSLpLLVALCHIQDSMGTLSLFMMTYWLQE 185
Cdd:COG1007 116 MLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGF-LLYGISLLYGATGSLNLAGIAAALAA 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 186 LPSSwsNYLLWTACIM---AFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILlKLGGYGM-MRIIMI-LNPLTKFMAYP 260
Cdd:COG1007 195 GGAN--SPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLVEaFPGLAADWQLL 271
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47588962 261 FLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLF 327
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAF 338
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
105-330 |
5.65e-10 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 61.60 E-value: 5.65e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 105 FLIMT-FTATEL--------IMFYILFESTLIPTLIIITRWGNQTErlNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLS 175
Cdd:PRK12650 113 YLLMTaFMAAMLllvladdvVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTS 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 176 LFMMTYwlqelPSSWSNYLLWTACI-----MAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMIL 250
Cdd:PRK12650 191 LSGILH-----SDVWAEKPGLTTVVavliaVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVF 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 251 NPLTKFMAypFLMMClwGM---IMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLF 327
Cdd:PRK12650 266 HDVAVWNW--LLIIV--GMitaLMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLF 341
|
...
gi 47588962 328 CLA 330
Cdd:PRK12650 342 MLI 344
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-330 |
7.14e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 60.73 E-value: 7.14e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 52 FSLTFFSDPLSSPLLILTTWLFPLTVMASQYHLTKEsweRKKHFLSTLIslqLFLIM----TFTATELIMFYILFESTLI 127
Cdd:PRK07691 69 FGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIE---RERYYYYPSV---LFMLAgvngAFLTGDIFNLFVFFEVMLM 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 128 PTLIIITRWGNQTErLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMTYWLQELPSSWSNYLLWTAC--IMAFMV 205
Cdd:PRK07691 143 ASYVLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAIlfLFVFAT 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 206 KMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRII-MILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKS 284
Cdd:PRK07691 222 KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFtLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKK 301
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 47588962 285 LIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLA 330
Cdd:PRK07691 302 IIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLI 347
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
172-332 |
5.83e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.21 E-value: 5.83e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 172 GTLSLFMMTYWLQELPSSWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIM-IL 250
Cdd:PRK12662 188 GTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYdVF 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 251 NPLTKFMAYPF----LMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVL 326
Cdd:PRK12662 268 KANFVFTTLPFnnvfMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSAL 347
|
....*.
gi 47588962 327 FCLANS 332
Cdd:PRK12662 348 FMVSGS 353
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
16-305 |
1.32e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 56.88 E-value: 1.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 16 WYST---NPMIWINITLHSLTISLVSLLLFKQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTVMASQYHLTKESWERK 92
Cdd:TIGR01770 23 FYSRkkrNPLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIVDNFALLIKLILLLSTLLTFFFALSYLSKEKINKF 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 93 KHFLSTLISLQLFLIMTFTaTELIMFYILFESTLIPTLIIITRWGNQTERLNAGL-YFLFYTLAGSLpLLVALCHIQDSM 171
Cdd:TIGR01770 103 EFYILLLFALLGIFLLVSS-NDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGL-LLFGISLIYGFT 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 172 GTLSLFMMTYWLQELPSSWSNYLLWTACIM-AFMVKMPLYGLHMWLPKAHVEAPIAGSmILAAILLKLGGYG-MMRIIMI 249
Cdd:TIGR01770 181 GSLNFEDLLLFLSNGMLNISLLLLGIVLILvGLLFKLSAVPFHMWVPDVYEGAPTPVT-AFFSIVPKIAIFAvFLRLFLY 259
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 47588962 250 LNPLTKFMAYPFLMMC-LWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQT 305
Cdd:TIGR01770 260 ILFGFSEAWQIFLAIIaFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGT 316
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
212-342 |
3.47e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 55.66 E-value: 3.47e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 212 LHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIM-ILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSS 290
Cdd:PRK06521 229 LHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYST 308
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47588962 291 ISHMALVTMA-----ILIQTPWSLMGATTLMVA------HGLTSSVLFCLANSNYERIHSRTM 342
Cdd:PRK06521 309 IENIGIIFVGlglamVFIAYGMPLLAALALTAAlyhllnHALFKSLLFLGAGAVLHATGTRDM 371
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
52-332 |
3.82e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 55.34 E-value: 3.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 52 FSLTFFSDPLSSpLLILTTWLFPLTVMASQYHLTKESWERKkHFLSTLISLQLFLIMTFTATELIMFYILFESTLIPTLI 131
Cdd:PRK12663 69 FGIQFTGDSLSA-LMVTTASFVATAIMAYGFGDIEHSGRRY-GFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFV 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 132 IITrWGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMTYWLQELPSSWSNYLLWTACIMAFMVKMPLYg 211
Cdd:PRK12663 147 LIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALF- 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 212 LHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIIMILNPLTKFMAYPFL--MMCLwGMIMTSLICLRQTDLKSLIAYS 289
Cdd:PRK12663 225 PFMWLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLatMAAI-TMVIGALGALAYKDIRRIAGYQ 303
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 47588962 290 SISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLANS 332
Cdd:PRK12663 304 VISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGS 346
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
111-357 |
4.72e-08 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 55.53 E-value: 4.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 111 TATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLfmmTYWLQELPSSW 190
Cdd:PRK12646 128 LSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNI---TEILGQADHIK 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 191 SNYLLWTACIMAFM---VKMPLYGLHMWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRIIMILNpLTKFMAYPFLMMCL 266
Cdd:PRK12646 205 NHGLFIPMIFMFLLgafTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 267 WGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAI-----LIQTP---------WSLMGATTLMVAHGLTSSVLFCLANS 332
Cdd:PRK12646 283 ITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQqdaiasiyvFVLFAALFHLMNHAIFKCALFMGVGI 362
|
250 260
....*....|....*....|....*
gi 47588962 333 NYERIHSRTMLLARGLQALLPLMNT 357
Cdd:PRK12646 363 IDHEAGTRDIRILSGMRQLFPKMNL 387
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-342 |
5.66e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 55.10 E-value: 5.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 59 DPLSSPLLILTTWLFPLTVMASQYHLTKESWERKKHFLSTLISLQLFLIMTftATELIMFYILFESTLIPTLIIITRWGN 138
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAI--TGDLFNFFVFLEIMSIASYALVAFRND 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 139 QTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMTYWLQELPSSWSNYLLwTACIMAFMVKMPLYGLHMWLPK 218
Cdd:PRK08376 167 TWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIAL-ALFIAGLAMKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 219 AHVEAPIAGSMILAAIllKLGG-YGMMRIIM-ILNPLTKFMAYPFLMMCL--WGMIMTSLICLRQTDLKSLIAYSSIS-- 292
Cdd:PRK08376 246 AYPAAPSSISAMLLVI--KQAGlYALARVLFsIYGPAINLATVGWVIIILgcLTMFVGVAMAVVQKDVKRLLAYHSVSqi 323
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 293 -HMAL---VTMAILIQTPWSLMGATTL------MVAHGLTSSVLFCLANSNYERIHSRTM 342
Cdd:PRK08376 324 gYMLLglgVGLAALGDPAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYETGTRNL 383
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-327 |
2.27e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 53.23 E-value: 2.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 115 LIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLfmmTYWLQELPSSWSNYL 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNF---SELLAAAPTILSSPL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 195 LWTACIMAF---MVKMPLYGLHMWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMRiimiLNPLtkFMAYPFLMMCL---- 266
Cdd:COG1009 210 LTLILLLLLlgaFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLAR----LSPL--FALSPVWLTVVaiig 282
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47588962 267 -WGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQtpwSLMGATTLMVAHGLTSSVLF 327
Cdd:COG1009 283 aITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLF 341
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
102-327 |
8.12e-07 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 51.43 E-value: 8.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 102 LQLFL---IMTFTATELImfyilfestliptliiitrWGNQTER-LNAGL-YFLFYTLAGSLPLLVALCHIQDsMGTLSL 176
Cdd:PRK12668 116 LTLFVfweLMAFTSTFLV-------------------WARGTKAaVRAGFrYLLVHVLGGVLLLAGILLHYAE-TGSFAF 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 177 FMMTywLQELPSSWsnyllwtaCIM-AFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIImilnPLTK 255
Cdd:PRK12668 176 GAIA--GLGGTAAW--------LILiGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAF----PGTE 241
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47588962 256 FMAYPFLMMCLWGMIMTSLiclrQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLF 327
Cdd:PRK12668 242 LLIYIGAAMAVYGVFFALL----ENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
111-327 |
1.70e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 50.69 E-value: 1.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 111 TATELIMFYILFESTLIPTLIIItrwGNQTERLN---AGLYFLFYTLAGSLPLLVALCHIQDSMGTlslfmmtYWLQELP 187
Cdd:PRK12644 124 TSDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGT-------YRLSELL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 188 SSWSNYLLWTACIMAFMV----KMPLYGLHMWLPKAhVEAPIAGSMIL-AAILLKLGGYGMMR-------------IIMI 249
Cdd:PRK12644 194 ADPPTGPAVSVAVVLILVgalsKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARlapgfadvpvwrpTVLV 272
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47588962 250 LNPLTkfmaypflmmclwgMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLF 327
Cdd:PRK12644 273 LGLAT--------------MLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
2.68e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 49.85 E-value: 2.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 137 GNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMTYWLQELPSSwSNYLLWTACIM---AFMVKMPLYGLH 213
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAA-DRALLEAGAALllvVFLIKAAMWPLN 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 214 MWLPKAHVEA--PIAGsmiLAAILLKLGGYGMMRIIMILNPLTKFMAYPFLMMCLWGMIMTSLIC-----LRQTDLKSLI 286
Cdd:PRK12666 231 FWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigvLAAQRLRRLA 307
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 47588962 287 AYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLFCLA 330
Cdd:PRK12666 308 AYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
156-398 |
3.85e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 49.44 E-value: 3.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 156 GSLPLLVALCHIQDSMGTLSLFMMTYWLQELPSswsNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAIL 235
Cdd:PRK08042 146 GTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPL---GSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVV 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 236 LKLGGYGMMRIIMILNPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTM-------AILIQTP-- 306
Cdd:PRK08042 223 MKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLglgagvtGIALEQPal 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 307 --WSLMGATTLMVAHGLTSSVLFCLANSNYERIHSRTMLLARGLQALLPLMNTWWLLASLSNLALPPSINLIGELLVTMA 384
Cdd:PRK08042 303 iaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQS 382
|
250
....*....|....
gi 47588962 385 AFSWSNTTIILTGL 398
Cdd:PRK08042 383 FFKLSNSGAFVARL 396
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
112-327 |
4.68e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 48.49 E-value: 4.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 112 ATELIMFYILFESTLIPTLIIITRWGNQTERLNAGL-YFLFYTLAGSLPLL--VALCHIQDSMgTLSLFMMTYWLQELPS 188
Cdd:MTH00196 12 SSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGLFLFgcALLCGTTGGL-HLSYINLVLNSGQSFS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 189 SWSNYLLWTACIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAaILLKLGgygMMRIIMILNPLTKFmaypFLMMCLWG 268
Cdd:MTH00196 91 SVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLG---IFSILVSIGLNVNI----LLIGGLFS 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 47588962 269 MIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTSSVLF 327
Cdd:MTH00196 163 LFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
17-323 |
6.62e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 48.28 E-value: 6.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 17 YSTNPMIWINITLHSLTISLVSLLLFKQADTNSNNFSLTFFSDPLSSPLLILTTWLFPLTVMASQYHLTKESWErkKHFL 96
Cdd:PRK05777 30 FVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLARPYLEDRGRG--EFYL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 97 STLISLQLFLIMTFtATELIMFYILFESTLIPTLIIITRWGNQTERLNAGL-YFLFYTLAGSLpLLVALCHIQDSMGTLS 175
Cdd:PRK05777 108 LVLFALLGMMVMVS-ANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIkYFVLGALASGF-LLYGMSLLYGATGSLS 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 176 LFMMTYWLQElpSSWSNYLLWTACIM---AFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILlKLGGYGM-MRI-IMIL 250
Cdd:PRK05777 186 FAGIAKALAD--GSGNSLLLLFGLVFllvGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLlVVAF 262
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47588962 251 NPLTKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILIQTPWSLMGATTLMVAHGLTS 323
Cdd:PRK05777 263 GGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
82-299 |
8.63e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 45.20 E-value: 8.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 82 YHLTKESWERKKHFLstLISLQLFLIMTFTATELIMFyILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLL 161
Cdd:PRK12649 103 YMSHKEDLPRYYQYL--LLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMF 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 162 VALCHIQDSMGTLSLFMMTYWLQELPSSWSNYLLWTACIMAFM---VKMPLYGLHMWLPKAhVEAPIAGSMIL-AAILLK 237
Cdd:PRK12649 180 AGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVK 258
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47588962 238 LGGYGMMRIIMILNPLTKFmaypFLMMCLWGMI---MTSLICLRQTDLKSLIAYSSISHMA-LVTM 299
Cdd:PRK12649 259 AGVYLVARIHPIFSGTEAW----FILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQLAyLMTM 320
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
22-300 |
1.09e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 44.68 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 22 MIWINITLHSLTISLvSLLLFKQADTNSNNFSLTFfsDPLSSPLLILTT------WLFPLTVMASQYHLTKeswerkkhF 95
Cdd:MTH00020 45 LIFYEILFNSSTTYI-KLWRWLDSDLLTVYFGLQF--DGLVAIMLLVVTtvstlvHIFSTAYMRGDPHIPR--------F 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 96 LSTLISLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTL- 174
Cdd:MTH00020 114 MSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLd 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 175 --SLFMMtywlqeLPSSWSNYLLWTaCIMAF---MVKMPLYGLHMWLPKAhVEAPIAGS-MILAAILLKLGGYGMMR--- 245
Cdd:MTH00020 194 fsSVFNM------VVSAPSSDITLI-CLFLFigaVGKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRssp 265
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47588962 246 ----------IIMILNPLTKFMAypflmmclwgmimtSLICLRQTDLKSLIAYSSISHMALVTMA 300
Cdd:MTH00020 266 lfeqaplaliIVTIVGSLTVFFA--------------ATVGLVQNDLKKVIAYSTCSQLGYMVVA 316
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-304 |
3.02e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 39.94 E-value: 3.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 59 DPLSSPLLILTTWLFPLTVMASQYHLTKESweRKKHFLSTLiSLQLFLIMTF-TATELIMFYILFESTLIPTLIIITRWG 137
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDP--HVPRFLCYL-SLFTFLMMVLvTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 138 NQTERLNAGLYFLFYTLAGSLPLLVALCHIQDSMGTLSLFMMT-------------YWLQELPSSWSNY-----LLWTAC 199
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsvgsgimdrgyYGGGAYESPLAPFaiigiLLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 200 IMafmvKMPLYGLHMWLPKAHVEAPIAGSMILAAILLKLGGYGMMRIImilnPLTKFMAYPFLMMCLWGMI---MTSLIC 276
Cdd:MTH00032 236 IG----KSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVG 307
|
250 260
....*....|....*....|....*...
gi 47588962 277 LRQTDLKSLIAYSSISHMALVTMAILIQ 304
Cdd:MTH00032 308 LVQNDLKKVIAYSTCSQLGYMVLIIGIE 335
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
88-291 |
5.20e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.39 E-value: 5.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 88 SWERKKHFLSTLISLQ-LFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTErlnAGLYFLFYTLAGSLPLLVALCH 166
Cdd:PRK06459 66 EYDHYGKWLSSLYILTiLGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAW 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 167 IQDSMGTLSLfmmtywlQELPSSWSNYLLwtacIMAFMVKMPLYGLHM--WLPKAHVEAPIAGSMILAAILLKLGGYGMM 244
Cdd:PRK06459 143 AFIISGTTNF-------SYLPSPVPLILA----SFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGIL 211
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 47588962 245 RIIMILNPL-TKFMAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSI 291
Cdd:PRK06459 212 KMTILTQTIpIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTI 259
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
177-303 |
5.27e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 38.71 E-value: 5.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 177 FMMTYWLQElpSSWSNYLLwtacIMAFMVKMPLYGLHMWLPKAHVEAPIAGSMILAAILlKLGGYGMMRIIMILNpltkF 256
Cdd:MTH00144 74 SLIMYNLSF--SWFSMSLL----LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLSNFLDLY----W 142
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 47588962 257 MAYPFLMMCLWGMIMTSLICLRQTDLKSLIAYSSISHMALVTMAILI 303
Cdd:MTH00144 143 LAYLLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILH 189
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
23-307 |
7.73e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 38.80 E-value: 7.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 23 IWINITLHSLTISLVSLLlfkqaDTNSNNFSLTFFSDPLSspLLILTTWLFPL--TVMASQYHLTKESweRKKHFLSTLI 100
Cdd:MTH00208 75 IWILLGCPNINISLSNWL-----SNTLFNFSLSFIFDFYF--ILFFSVALFVTwsIIEFSHYYMSNDP--NKNAFFRLLI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 101 SLQLFLIMTFTATELIMFYILFESTLIPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLV--ALCHIQDSMGTLSLFm 178
Cdd:MTH00208 146 IFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILflSLSLINFNSWNLNEI- 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 179 mtYWLQELPSSWSNYLLWTAcIMAFMVKMPLYGLHMWLPKAhVEAPIAGS-------MILAAILLklggygMMRIIMILN 251
Cdd:MTH00208 225 --LSLNNSNSFLINILLFGI-LLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLIS 294
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 47588962 252 PLTKFmaypfLMMCLWGMIMTSL----ICLRQTDLKSLIAYSSISHMALVTMAILIQTPW 307
Cdd:MTH00208 295 NSPWF-----LSLCLILGSLTALfaasTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPN 349
|
|
| |
