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Conserved domains on  [gi|470226485|ref|YP_007624509|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Tragopan temminckii]

Protein Classification

ND4L family protein( domain architecture ID 10009575)

ND4L family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 9.07e-45

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177184  Cd Length: 98  Bit Score: 139.60  E-value: 9.07e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485  1 MSPMHFSFYSAFTFSALGLAFHRTHLISALLCLESMMLSMFIPLSIWTVENQTPSFALVPILMLAFSACEAGTGLAMLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 470226485 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 9.07e-45

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 139.60  E-value: 9.07e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485  1 MSPMHFSFYSAFTFSALGLAFHRTHLISALLCLESMMLSMFIPLSIWTVENQTPSFALVPILMLAFSACEAGTGLAMLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 470226485 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-98 5.56e-13

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 59.11  E-value: 5.56e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485   3 PMHFSFYSAFTFSALGLAFHRtHLISALLCLESMMLSMFIPLSIWTVENQTPSFALVPILMLAFSACEAGTGLAMLVAST 82
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|....*.
gi 470226485  83 RTHGSDHLHNLNLLQC 98
Cdd:pfam00420 80 RTHGTDDVDSLNLLKG 95
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 1-96 1.50e-04

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 37.35  E-value: 1.50e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485  1 MSPMHFSFYSAFTFsALGL--AFHRTHLISALLCLESMMLSMFIPLSIWTVENQTPSFALVPILMLAFSACEAGTGLAML 78
Cdd:COG0713   1 IPLEHYLILAAILF-AIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAII 79

                        90
                ....*....|....*...
gi 470226485 79 VASTRTHGSDHLHNLNLL 96
Cdd:COG0713  80 VALYRNRGTIDVDDLNEL 97
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 9.07e-45

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 139.60  E-value: 9.07e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485  1 MSPMHFSFYSAFTFSALGLAFHRTHLISALLCLESMMLSMFIPLSIWTVENQTPSFALVPILMLAFSACEAGTGLAMLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 470226485 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 1-98 5.16e-43

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 135.09  E-value: 5.16e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485  1 MSPMHFSFYSAFTFSALGLAFHRTHLISALLCLESMMLSMFIPLSIWTVENQTPSFALVPILMLAFSACEAGTGLAMLVA 80
Cdd:MTH00126  1 MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVA 80

                        90
                ....*....|....*...
gi 470226485 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00126 81 TARTHGTDRLQNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.06e-40

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 128.57  E-value: 2.06e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485  1 MSPMHFSFYSAFTFSALGLAFHRTHLISALLCLESMMLSMFIPLSIWTVENQTPSFALVPILMLAFSACEAGTGLAMLVA 80
Cdd:MTH00067  1 MSPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLPMFMLTFSACEASTGLALMVA 80

                        90
                ....*....|....*...
gi 470226485 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00067 81 TTRTHGTDHLKNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.44e-26

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 93.84  E-value: 1.44e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485  1 MSPMHFSFYSAFTFSALGLAFHRTHLISALLCLESMMLSMFIPLSIWTVENQTPSFALVPILMLAFSACEAGTGLAMLVA 80
Cdd:MTH00107  1 MSLIYMNIMLAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAAVGLALLVM 80

                        90
                ....*....|....*...
gi 470226485 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00107 81 VSNTYGTDYVQNLNLLQC 98
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 4-96 7.20e-20

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 76.52  E-value: 7.20e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485  4 MHFSFYSAFTFSALGLAFHRTHLISALLCLESMMLSMFIPLSIWTVENQTPSFALVPILMLAFSACEAGTGLAMLVASTR 83
Cdd:MTH00181  1 MMFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNR 80

                        90
                ....*....|...
gi 470226485 84 THGSDHLHNLNLL 96
Cdd:MTH00181 81 THGSDHLLKFNLL 93
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 1-97 7.74e-17

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 68.79  E-value: 7.74e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485  1 MSPMHFSFYSAFTFSALGLAFHRTHLISALLCLESMMLSMFIPLSIWTVENQTPSFALVPILMLAFSACEAGTGLAMLVA 80
Cdd:MTH00043  1 MNIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNLSFSLLLLTLSACEASIGLSLMVL 80

                        90
                ....*....|....*..
gi 470226485 81 STRTHGSDHLHNLNLLQ 97
Cdd:MTH00043 81 LSRNHNSDLVASLNLLQ 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-98 5.56e-13

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 59.11  E-value: 5.56e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485   3 PMHFSFYSAFTFSALGLAFHRtHLISALLCLESMMLSMFIPLSIWTVENQTPSFALVPILMLAFSACEAGTGLAMLVAST 82
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|....*.
gi 470226485  83 RTHGSDHLHNLNLLQC 98
Cdd:pfam00420 80 RTHGTDDVDSLNLLKG 95
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 4-98 1.08e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 53.05  E-value: 1.08e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485  4 MHFSFYSAFTFSALGLAFHRTHLISALLCLESMMLSMFIPLSIWTVEnqTPSFALVPILMLAFSACEAGTGLAMLVASTR 83
Cdd:MTH00188  5 MILVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSY--MEKELYLSLVLLTFAACEASVGLALLVSLIR 82

                        90
                ....*....|....*
gi 470226485 84 THGSDHLHNLNLLQC 98
Cdd:MTH00188 83 SHGSDYVSSLNLIKC 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-98 5.25e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 46.38  E-value: 5.25e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485  1 MSPMHFSFYSAFTFSALGLAFHRTHLISALLCLESMMLSMFIpLSIWTVENQTPSFALVPILmLAFSACEAGTGLAMLVA 80
Cdd:MTH00149  2 MFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLV-MMFSSSGLISFSSYLFLII-LTFGACEASLGLSLLVS 79

                        90
                ....*....|....*...
gi 470226485 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00149 80 LIRLHGNDYVSSLSSLKF 97
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 1-98 5.32e-08

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 46.28  E-value: 5.32e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485  1 MSPMHFSFYSAFTFSALGLAFHRTHLISALLCLESMMLSM--FIPLSIWTVENQTPSFAlvpILMLAFSACEAGTGLAML 78
Cdd:MTH00013  1 MMSPLFILSISPFISMFNLSLQRKHLLMSLLSLEAMILSLalFIPLSLMFANQVNGMLA---IVLLTFGACEASLGLSLL 77

                        90       100
                ....*....|....*....|
gi 470226485 79 VASTRTHGSDHLHNLNLLQC 98
Cdd:MTH00013 78 VLMTRSYGNDMLKSLTSNKC 97
ND4L MTH00180
NADH dehydrogenase subunit 4L; Provisional
 12-97 3.84e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177231  Cd Length: 99  Bit Score: 44.25  E-value: 3.84e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485 12 FTFSALGLAFHRTHLISALLCLESMMLSMFIPLSIWTVENQTPSFALVPILMLAFSACEAGTGLAMLVASTRTHGSDHLH 91
Cdd:MTH00180 13 FILGVLGIVLNRSNLIIMLMSIELMLLAISLLFLINSVAIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTIAVK 92


                ....*.
gi 470226485 92 NLNLLQ 97
Cdd:MTH00180 93 SLNLLR 98
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 4-92 1.65e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 42.06  E-value: 1.65e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485  4 MHFSFYSAFTFSALGLAFHRTHLISALLCLESMMLSMFIPLSIWTVENQTPSFalVPILMLAFSACEAGTGLAMLVASTR 83
Cdd:MTH00162  3 MLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELY--FLLFFLTFSVCEGALGLSILVSMIR 80


                ....*....
gi 470226485 84 THGSDHLHN 92
Cdd:MTH00162 81 SHGNDYFSS 89
ND4L MTH00001
NADH dehydrogenase subunit 4L; Provisional
 12-97 7.14e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177099  Cd Length: 99  Bit Score: 40.82  E-value: 7.14e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485 12 FTFSALGLAFHRTHLISALLCLESMMLSMFIPLSIWTVENQTPSFALVPILMLAFSACEAGTGLAMLVASTRTHGSDHLH 91
Cdd:MTH00001 13 FLLGIWGIILNRGHFIIMLVSIELVLLSTFFLFLINSIEIDLLIEQIFTIMGLTIAAAESAIGLAIMVAYYRIRGTISLK 92


                ....*.
gi 470226485 92 NLNLLQ 97
Cdd:MTH00001 93 SLNSLR 98
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
 61-98 9.81e-05

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 39.55  E-value: 9.81e-05
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 470226485  61 ILMLAFSACEAGTGLAMLVASTRTHGSDHLHNLNLLQC 98
Cdd:MTH00127 395 ALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHT 432
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 1-96 1.50e-04

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 37.35  E-value: 1.50e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485  1 MSPMHFSFYSAFTFsALGL--AFHRTHLISALLCLESMMLSMFIPLSIWTVENQTPSFALVPILMLAFSACEAGTGLAML 78
Cdd:COG0713   1 IPLEHYLILAAILF-AIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAII 79

                        90
                ....*....|....*...
gi 470226485 79 VASTRTHGSDHLHNLNLL 96
Cdd:COG0713  80 VALYRNRGTIDVDDLNEL 97
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
1-96 3.85e-04

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 36.31  E-value: 3.85e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 470226485   1 MSPMHFSFYSA--FTFSALGLaFHRTHLISALLCLESMMLSMFIPLSIWTVENQTPSFALVPILMLAFSACEAGTGLAML 78
Cdd:PRK05715   2 IPLQHYLILAAilFCIGLVGL-LLRRNAIVVLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAFFVITVAAAEAAIGLAIL 80

                         90
                 ....*....|....*...
gi 470226485  79 VASTRTHGSDHLHNLNLL 96
Cdd:PRK05715  81 LQLYRNRGTIDVDDLNEL 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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