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Conserved domains on  [gi|466042163|ref|XP_004276561|]
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tachykinin-3 isoform X2 [Orcinus orca]

Protein Classification

Neurokinin_B domain-containing protein( domain architecture ID 10510854)

Neurokinin_B domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Neurokinin_B pfam03823
Neurokinin B;
1-58 2.31e-35

Neurokinin B;


:

Pssm-ID: 461065  Cd Length: 58  Bit Score: 116.08  E-value: 2.31e-35
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 466042163    1 MRSALLFAVILALSLARSFGAVCEESQEQVVPGGSHSKKDSNLYQLPPSLLRRLYDSR 58
Cdd:pfam03823   1 MRSTLLFAAILALSLAQSFGAVCEESQEQVVPGGGHSKKDSDLYQLPPSLLRRLYDSR 58
 
Name Accession Description Interval E-value
Neurokinin_B pfam03823
Neurokinin B;
1-58 2.31e-35

Neurokinin B;


Pssm-ID: 461065  Cd Length: 58  Bit Score: 116.08  E-value: 2.31e-35
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 466042163    1 MRSALLFAVILALSLARSFGAVCEESQEQVVPGGSHSKKDSNLYQLPPSLLRRLYDSR 58
Cdd:pfam03823   1 MRSTLLFAAILALSLAQSFGAVCEESQEQVVPGGGHSKKDSDLYQLPPSLLRRLYDSR 58
 
Name Accession Description Interval E-value
Neurokinin_B pfam03823
Neurokinin B;
1-58 2.31e-35

Neurokinin B;


Pssm-ID: 461065  Cd Length: 58  Bit Score: 116.08  E-value: 2.31e-35
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 466042163    1 MRSALLFAVILALSLARSFGAVCEESQEQVVPGGSHSKKDSNLYQLPPSLLRRLYDSR 58
Cdd:pfam03823   1 MRSTLLFAAILALSLAQSFGAVCEESQEQVVPGGGHSKKDSDLYQLPPSLLRRLYDSR 58
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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