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Conserved domains on  [gi|460404152|ref|XP_004247548|]
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LRR receptor-like serine/threonine-protein kinase ERL1 [Solanum lycopersicum]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 1000136)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN00113 super family cl33413
leucine-rich repeat receptor-like protein kinase; Provisional
 1-373 9.91e-29

leucine-rich repeat receptor-like protein kinase; Provisional


The actual alignment was detected with superfamily member PLN00113:

Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 118.41  E-value: 9.91e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152   1 MKFLLWMCLFQFHviviqqcgaMLHPIDFLALQAIRKTLNDlpGSSFFASWDFTSDPCSFAGVYCAG-DKVIALNLGdpr 79
Cdd:PLN00113  12 LIFMLFFLFLNFS---------MLHAEELELLLSFKSSIND--PLKYLSNWNSSADVCLWQGITCNNsSRVVSIDLS--- 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152  80 agSPGLIGRLNPAIGKLSALAEFTVVPGKIFGALPES-FSQLNNLRFLGVSRNFLSGRIPAglGKLRRLQTLDLSFNQLT 158
Cdd:PLN00113  78 --GKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDiFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLS 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 159 GNIPWAIGTLPALNNVILCHNHLSGSVPPFVSlKLTRLD---LKHNALSGSL-LPMSLPSSLQYLSLSSNQLTGPVDHLL 234
Cdd:PLN00113 154 GEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLT-NLTSLEfltLASNQLVGQIpRELGQMKSLKWIYLGYNNLSGEIPYEI 232

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 235 TRLNRLNYLDLSLNRFTGCIP---GNLfrfpiTNLQ---LQRNQFTGRIYPA--GLVTIPVVDLSFNRFYGEISPLFSGV 306
Cdd:PLN00113 233 GGLTSLNHLDLVYNNLTGPIPsslGNL-----KNLQylfLYQNKLSGPIPPSifSLQKLISLDLSDNSLSGEIPELVIQL 307

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 460404152 307 Q---ILYMNNNRFMGQVPGIM--VDRLlsaniHVLYLQHNFLTGiainpaaEIPvrSSLCLQYNCMVLPVQT 373
Cdd:PLN00113 308 QnleILHLFSNNFTGKIPVALtsLPRL-----QVLQLWSNKFSG-------EIP--KNLGKHNNLTVLDLST 365
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 1-373 9.91e-29

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 118.41  E-value: 9.91e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152   1 MKFLLWMCLFQFHviviqqcgaMLHPIDFLALQAIRKTLNDlpGSSFFASWDFTSDPCSFAGVYCAG-DKVIALNLGdpr 79
Cdd:PLN00113  12 LIFMLFFLFLNFS---------MLHAEELELLLSFKSSIND--PLKYLSNWNSSADVCLWQGITCNNsSRVVSIDLS--- 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152  80 agSPGLIGRLNPAIGKLSALAEFTVVPGKIFGALPES-FSQLNNLRFLGVSRNFLSGRIPAglGKLRRLQTLDLSFNQLT 158
Cdd:PLN00113  78 --GKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDiFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLS 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 159 GNIPWAIGTLPALNNVILCHNHLSGSVPPFVSlKLTRLD---LKHNALSGSL-LPMSLPSSLQYLSLSSNQLTGPVDHLL 234
Cdd:PLN00113 154 GEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLT-NLTSLEfltLASNQLVGQIpRELGQMKSLKWIYLGYNNLSGEIPYEI 232

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 235 TRLNRLNYLDLSLNRFTGCIP---GNLfrfpiTNLQ---LQRNQFTGRIYPA--GLVTIPVVDLSFNRFYGEISPLFSGV 306
Cdd:PLN00113 233 GGLTSLNHLDLVYNNLTGPIPsslGNL-----KNLQylfLYQNKLSGPIPPSifSLQKLISLDLSDNSLSGEIPELVIQL 307

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 460404152 307 Q---ILYMNNNRFMGQVPGIM--VDRLlsaniHVLYLQHNFLTGiainpaaEIPvrSSLCLQYNCMVLPVQT 373
Cdd:PLN00113 308 QnleILHLFSNNFTGKIPVALtsLPRL-----QVLQLWSNKFSG-------EIP--KNLGKHNNLTVLDLST 365
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
86-275 2.23e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 80.36  E-value: 2.23e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152  86 IGRLNPAIGKLSALAEFTVVPGKIfGALPESFSQLNNLRFLGVSRNFLSGrIPAGLGKLRRLQTLDLSFNQLTgNIPWAI 165
Cdd:COG4886  125 LTDLPEELANLTNLKELDLSNNQL-TDLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQIT-DLPEPL 201

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 166 GTLPALNNVILCHNHLSgSVP-PFVSLK-LTRLDLKHNALSGslLPmslpsslqylslssnqltgpvdhLLTRLNRLNYL 243
Cdd:COG4886  202 GNLTNLEELDLSGNQLT-DLPePLANLTnLETLDLSNNQLTD--LP-----------------------ELGNLTNLEEL 255

                        170       180       190
                 ....*....|....*....|....*....|..
gi 460404152 244 DLSLNRFTGcIPGNLFRFPITNLQLQRNQFTG 275
Cdd:COG4886  256 DLSNNQLTD-LPPLANLTNLKTLDLSNNQLTD 286
LRRNT_2 pfam08263
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
 28-65 1.79e-06

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


Pssm-ID: 462411 [Multi-domain]  Cd Length: 41  Bit Score: 44.21  E-value: 1.79e-06
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 460404152   28 DFLALQAIRKTLNDLPGssFFASWD-FTSDPCSFAGVYC 65
Cdd:pfam08263   4 DGQALLAFKSSLNDPPG--ALSSWNsSSSDPCSWTGVTC 40
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 1-373 9.91e-29

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 118.41  E-value: 9.91e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152   1 MKFLLWMCLFQFHviviqqcgaMLHPIDFLALQAIRKTLNDlpGSSFFASWDFTSDPCSFAGVYCAG-DKVIALNLGdpr 79
Cdd:PLN00113  12 LIFMLFFLFLNFS---------MLHAEELELLLSFKSSIND--PLKYLSNWNSSADVCLWQGITCNNsSRVVSIDLS--- 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152  80 agSPGLIGRLNPAIGKLSALAEFTVVPGKIFGALPES-FSQLNNLRFLGVSRNFLSGRIPAglGKLRRLQTLDLSFNQLT 158
Cdd:PLN00113  78 --GKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDiFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLS 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 159 GNIPWAIGTLPALNNVILCHNHLSGSVPPFVSlKLTRLD---LKHNALSGSL-LPMSLPSSLQYLSLSSNQLTGPVDHLL 234
Cdd:PLN00113 154 GEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLT-NLTSLEfltLASNQLVGQIpRELGQMKSLKWIYLGYNNLSGEIPYEI 232

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 235 TRLNRLNYLDLSLNRFTGCIP---GNLfrfpiTNLQ---LQRNQFTGRIYPA--GLVTIPVVDLSFNRFYGEISPLFSGV 306
Cdd:PLN00113 233 GGLTSLNHLDLVYNNLTGPIPsslGNL-----KNLQylfLYQNKLSGPIPPSifSLQKLISLDLSDNSLSGEIPELVIQL 307

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 460404152 307 Q---ILYMNNNRFMGQVPGIM--VDRLlsaniHVLYLQHNFLTGiainpaaEIPvrSSLCLQYNCMVLPVQT 373
Cdd:PLN00113 308 QnleILHLFSNNFTGKIPVALtsLPRL-----QVLQLWSNKFSG-------EIP--KNLGKHNNLTVLDLST 365
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 85-345 2.13e-28

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 117.64  E-value: 2.13e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152  85 LIGRLNPAIGKLSALAEFTVVPGKIFGALPESFSQLNNLRFLGVSRNFLSGRIPAGLGKLRRLQTLDLSFNQLTGNIPWA 164
Cdd:PLN00113 176 LVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSS 255

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 165 IGTLPALNNVILCHNHLSGSVPP--FVSLKLTRLDLKHNALSGSLLPMSLPSSLQYLS-LSSNQLTGPVDHLLTRLNRLN 241
Cdd:PLN00113 256 LGNLKNLQYLFLYQNKLSGPIPPsiFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILhLFSNNFTGKIPVALTSLPRLQ 335

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 242 YLDLSLNRFTGCIP------------------------------GNLFRF-------------------PITNLQLQRNQ 272
Cdd:PLN00113 336 VLQLWSNKFSGEIPknlgkhnnltvldlstnnltgeipeglcssGNLFKLilfsnslegeipkslgacrSLRRVRLQDNS 415

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 460404152 273 FTGRIyPAGLVTIPVV---DLSFNRFYGEISPL---FSGVQILYMNNNRFMGQVPgimvDRLLSANIHVLYLQHNFLTG 345
Cdd:PLN00113 416 FSGEL-PSEFTKLPLVyflDISNNNLQGRINSRkwdMPSLQMLSLARNKFFGGLP----DSFGSKRLENLDLSRNQFSG 489
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 81-365 1.06e-23

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 103.39  E-value: 1.06e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152  81 GSPGLIGRLNPAIGKLSALAEFTVVPGKIFGALPESFSQLNNLRFLGVSRNFLSGRIPAGLGKLRRLQTLDLSFNQL--- 157
Cdd:PLN00113 220 GYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLsge 299

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 158 ---------------------TGNIPWAIGTLPALNNVILCHNHLSGSVPPFVSLK--LTRLDLKHNALSGSlLP--MSL 212
Cdd:PLN00113 300 ipelviqlqnleilhlfsnnfTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHnnLTVLDLSTNNLTGE-IPegLCS 378

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 213 PSSLQYLSLSSNQLTGPVDHLLTRLNRLNYLDLSLNRFTGCIPGNLFRFPITN-LQLQRNQFTGRIYPAG--LVTIPVVD 289
Cdd:PLN00113 379 SGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYfLDISNNNLQGRINSRKwdMPSLQMLS 458

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 290 LSFNRFYGEISPLFSGVQI--LYMNNNRFMGQVP--------------------GIMVDRLLSA-NIHVLYLQHNFLTGI 346
Cdd:PLN00113 459 LARNKFFGGLPDSFGSKRLenLDLSRNQFSGAVPrklgslselmqlklsenklsGEIPDELSSCkKLVSLDLSHNQLSGQ 538

                        330
                 ....*....|....*....
gi 460404152 347 AINPAAEIPVRSSLCLQYN 365
Cdd:PLN00113 539 IPASFSEMPVLSQLDLSQN 557
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 82-321 4.13e-21

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 95.69  E-value: 4.13e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152  82 SPGLIGRLNPAIGKLSALAEFTVVPGKIFGALPESFSQLNNLRFLGVSRNFLSGRIPAGLGKLRRLQTLDLSFNQLTGNI 161
Cdd:PLN00113 317 SNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEI 396

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 162 PWAIGTLPALNNVILCHNHLSGSVP------PFVSL--------------------KLTRLDLKHNALSGSLLPMSLPSS 215
Cdd:PLN00113 397 PKSLGACRSLRRVRLQDNSFSGELPseftklPLVYFldisnnnlqgrinsrkwdmpSLQMLSLARNKFFGGLPDSFGSKR 476

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 216 LQYLSLSSNQLTGPVDHLLTRLNRLNYLDLSLNRFTGCIPGNLFRFP-ITNLQLQRNQFTGRIyPAGLVTIPV---VDLS 291
Cdd:PLN00113 477 LENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKkLVSLDLSHNQLSGQI-PASFSEMPVlsqLDLS 555

                        250       260       270
                 ....*....|....*....|....*....|...
gi 460404152 292 FNRFYGEISPLFSGVQILY---MNNNRFMGQVP 321
Cdd:PLN00113 556 QNQLSGEIPKNLGNVESLVqvnISHNHLHGSLP 588
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
86-275 2.23e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 80.36  E-value: 2.23e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152  86 IGRLNPAIGKLSALAEFTVVPGKIfGALPESFSQLNNLRFLGVSRNFLSGrIPAGLGKLRRLQTLDLSFNQLTgNIPWAI 165
Cdd:COG4886  125 LTDLPEELANLTNLKELDLSNNQL-TDLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQIT-DLPEPL 201

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 166 GTLPALNNVILCHNHLSgSVP-PFVSLK-LTRLDLKHNALSGslLPmslpsslqylslssnqltgpvdhLLTRLNRLNYL 243
Cdd:COG4886  202 GNLTNLEELDLSGNQLT-DLPePLANLTnLETLDLSNNQLTD--LP-----------------------ELGNLTNLEEL 255

                        170       180       190
                 ....*....|....*....|....*....|..
gi 460404152 244 DLSLNRFTGcIPGNLFRFPITNLQLQRNQFTG 275
Cdd:COG4886  256 DLSNNQLTD-LPPLANLTNLKTLDLSNNQLTD 286
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
114-316 1.57e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 74.58  E-value: 1.57e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 114 PESFSQLNNLRFLGVSRNFLSgRIPAGLGKLRRLQTLDLSFNQLTgNIPWAIGTLPALNNVILCHNHLSgSVPPFVSL-- 191
Cdd:COG4886  106 NEELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQLT-DLPEELGNlt 182

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 192 KLTRLDLKHNALSGslLPMSlpsslqylslssnqltgpvdhlLTRLNRLNYLDLSLNRFTGcIPGNLFRFP-ITNLQLQR 270
Cdd:COG4886  183 NLKELDLSNNQITD--LPEP----------------------LGNLTNLEELDLSGNQLTD-LPEPLANLTnLETLDLSN 237

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 460404152 271 NQFTGRIYPAGLVTIPVVDLSFNRFyGEISPL--FSGVQILYMNNNRF 316
Cdd:COG4886  238 NQLTDLPELGNLTNLEELDLSNNQL-TDLPPLanLTNLKTLDLSNNQL 284
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 93-187 2.65e-14

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 74.88  E-value: 2.65e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152  93 IGKLSALAEFTVVPGKIFGALPESFSQLNNLRFLGVSRNFLSGRIPAGLGKLRRLQTLDLSFNQLTGNIPWAIGTLPALN 172
Cdd:PLN00113 495 LGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLV 574

                         90
                 ....*....|....*
gi 460404152 173 NVILCHNHLSGSVPP 187
Cdd:PLN00113 575 QVNISHNHLHGSLPS 589
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
86-208 4.59e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 73.04  E-value: 4.59e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152  86 IGRLNPAIGKLSALAEFTVVPGKIfGALPESFSQLNNLRFLGVSRNFLSgRIPAGLGKLRRLQTLDLSFNQLTgNIPWaI 165
Cdd:COG4886  171 LTDLPEELGNLTNLKELDLSNNQI-TDLPEPLGNLTNLEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQLT-DLPE-L 246

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 460404152 166 GTLPALNNVILCHNHLSgSVPPFVSL-KLTRLDLKHNALSGSLL 208
Cdd:COG4886  247 GNLTNLEELDLSNNQLT-DLPPLANLtNLKTLDLSNNQLTDLKL 289
PLN03150 PLN03150
hypothetical protein; Provisional
 111-186 6.31e-13

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 70.23  E-value: 6.31e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 460404152 111 GALPESFSQLNNLRFLGVSRNFLSGRIPAGLGKLRRLQTLDLSFNQLTGNIPWAIGTLPALNNVILCHNHLSGSVP 186
Cdd:PLN03150 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVP 507
PLN03150 PLN03150
hypothetical protein; Provisional
 31-169 2.01e-12

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 68.69  E-value: 2.01e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152  31 ALQAIRKTLNdLPgSSFfaSWDftSDPCS-----FAGVYCAGDKVI------ALNLGDPragspGLIGRLNPAIGKLSAL 99
Cdd:PLN03150 376 ALQTLKSSLG-LP-LRF--GWN--GDPCVpqqhpWSGADCQFDSTKgkwfidGLGLDNQ-----GLRGFIPNDISKLRHL 444

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 100 AEFTVVPGKIFGALPESFSQLNNLRFLGVSRNFLSGRIPAGLGKLRRLQTLDLSFNQLTGNIPWAIGTLP 169
Cdd:PLN03150 445 QSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRL 514
PLN03150 PLN03150
hypothetical protein; Provisional
 126-207 1.91e-11

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 65.61  E-value: 1.91e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 126 LGVSRNFLSGRIPAGLGKLRRLQTLDLSFNQLTGNIPWAIGTLPALNNVILCHNHLSGSVPPFVSL--KLTRLDLKHNAL 203
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQltSLRILNLNGNSL 502


                 ....
gi 460404152 204 SGSL 207
Cdd:PLN03150 503 SGRV 506
LRRNT_2 pfam08263
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
 28-65 1.79e-06

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


Pssm-ID: 462411 [Multi-domain]  Cd Length: 41  Bit Score: 44.21  E-value: 1.79e-06
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 460404152   28 DFLALQAIRKTLNDLPGssFFASWD-FTSDPCSFAGVYC 65
Cdd:pfam08263   4 DGQALLAFKSSLNDPPG--ALSSWNsSSSDPCSWTGVTC 40
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
112-385 2.00e-04

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 43.53  E-value: 2.00e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 112 ALPESFSqlNNLRFLGVSRNFLSgRIPAGLGKlrRLQTLDLSFNQLTgnipwaigTLPalnnvilchNHLSGSvppfvsl 191
Cdd:PRK15370 213 SLPENLQ--GNIKTLYANSNQLT-SIPATLPD--TIQEMELSINRIT--------ELP---------ERLPSA------- 263

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 192 kLTRLDLKHNALSGslLPMSLPsslqylslssnqltgpvdhlltrlNRLNYLDLSLNRFTGcIPGNLfrfP--ITNLQLQ 269
Cdd:PRK15370 264 -LQSLDLFHNKISC--LPENLP------------------------EELRYLSVYDNSIRT-LPAHL---PsgITHLNVQ 312

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 270 RNQFTG--RIYPAGLVTIPVVDLSFNRFYGEISPlfsGVQILYMNNNRFMgqvpgiMVDRLLSANIHVLYLQHNFLTGIA 347
Cdd:PRK15370 313 SNSLTAlpETLPPGLKTLEAGENALTSLPASLPP---ELQVLDVSKNQIT------VLPETLPPTITTLDVSRNALTNLP 383

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 460404152 348 IN-PAAEIPVRSSlclqYNCMV-LPVQTPCPLKAGKQKSR 385
Cdd:PRK15370 384 ENlPAALQIMQAS----RNNLVrLPESLPHFRGEGPQPTR 419
PLN03150 PLN03150
hypothetical protein; Provisional
 243-329 3.06e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 42.88  E-value: 3.06e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 460404152 243 LDLSLNRFTGCIPGNLFRFP-ITNLQLQRNQFTGRIyPAGLVTIP---VVDLSFNRFYGEISP---LFSGVQILYMNNNR 315
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRhLQSINLSGNSIRGNI-PPSLGSITsleVLDLSYNSFNGSIPEslgQLTSLRILNLNGNS 501

                         90
                 ....*....|....
gi 460404152 316 FMGQVPGIMVDRLL 329
Cdd:PLN03150 502 LSGRVPAALGGRLL 515
LRR_8 pfam13855
Leucine rich repeat;
114-157 2.60e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 35.96  E-value: 2.60e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 460404152  114 PESFSQLNNLRFLGVSRNFLSGRIPAGLGKLRRLQTLDLSFNQL 157
Cdd:pfam13855  18 DGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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