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Conserved domains on  [gi|459667910|gb|AGG80974|]
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Sly1-like protein, partial [Lutzomyia longipalpis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Sec1 super family cl15415
Sec1 family;
1-60 1.23e-18

Sec1 family;


The actual alignment was detected with superfamily member pfam00995:

Pssm-ID: 472804  Cd Length: 506  Bit Score: 76.98  E-value: 1.23e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 459667910    1 ELRELGVTLHVQLHSDRDSIPDVPAIYFCAPTDENLGRICQDFQN--GLYDVYHLNFISPIS 60
Cdd:pfam00995  21 DLLEEGVTLVEKIEKLREPLPDVPAIYFVRPTKENIDRIAADFISsrPKYKSYHIFFTSRLS 82
 
Name Accession Description Interval E-value
Sec1 pfam00995
Sec1 family;
1-60 1.23e-18

Sec1 family;


Pssm-ID: 460020  Cd Length: 506  Bit Score: 76.98  E-value: 1.23e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 459667910    1 ELRELGVTLHVQLHSDRDSIPDVPAIYFCAPTDENLGRICQDFQN--GLYDVYHLNFISPIS 60
Cdd:pfam00995  21 DLLEEGVTLVEKIEKLREPLPDVPAIYFVRPTKENIDRIAADFISsrPKYKSYHIFFTSRLS 82
SEC1 COG5158
Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular ...
 1-57 1.03e-09

Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular trafficking and secretion];


Pssm-ID: 227487  Cd Length: 582  Bit Score: 51.65  E-value: 1.03e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 459667910   1 ELRELGVTLHVQLHSDRDSIPDVPAIYFCAPTDENLGRICQDFQNGlyDVYHLNFIS 57
Cdd:COG5158   46 ELLEHGITLVDLIENKREPISDLPAIYFVRPTKENIDLILEDLEQW--DPFYLNYHI 100
 
Name Accession Description Interval E-value
Sec1 pfam00995
Sec1 family;
1-60 1.23e-18

Sec1 family;


Pssm-ID: 460020  Cd Length: 506  Bit Score: 76.98  E-value: 1.23e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 459667910    1 ELRELGVTLHVQLHSDRDSIPDVPAIYFCAPTDENLGRICQDFQN--GLYDVYHLNFISPIS 60
Cdd:pfam00995  21 DLLEEGVTLVEKIEKLREPLPDVPAIYFVRPTKENIDRIAADFISsrPKYKSYHIFFTSRLS 82
SEC1 COG5158
Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular ...
 1-57 1.03e-09

Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular trafficking and secretion];


Pssm-ID: 227487  Cd Length: 582  Bit Score: 51.65  E-value: 1.03e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 459667910   1 ELRELGVTLHVQLHSDRDSIPDVPAIYFCAPTDENLGRICQDFQNGlyDVYHLNFIS 57
Cdd:COG5158   46 ELLEHGITLVDLIENKREPISDLPAIYFVRPTKENIDLILEDLEQW--DPFYLNYHI 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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