|
Name |
Accession |
Description |
Interval |
E-value |
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
214-278 |
1.53e-34 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 126.36 E-value: 1.53e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 4506751 214 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKV 278
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
60-124 |
5.42e-31 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 116.35 E-value: 5.42e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 4506751 60 VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRPSKL 124
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
214-279 |
4.42e-28 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 108.06 E-value: 4.42e-28
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 4506751 214 IGDRVLVGGT-KAGVVRFLGETDFAKGEWCGVELDEPL-GKNDGAVAGTRYFQCQPKYGLFAPVHKVT 279
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPLrGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
60-125 |
2.29e-27 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 106.13 E-value: 2.29e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 4506751 60 VGERVWVNGN-KPGFIQFLGETQFAPGQWAGIVLDEP-IGKNDGSVAGVRYFQCEPLKGIFTRPSKLT 125
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPlRGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
352-1153 |
1.87e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 101.67 E-value: 1.87e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 352 ALQEALKEKQ-----QHIEQLLAERDLERAEVAKATSHVGEIEQELAlardghdqhvlELEAKMDQLRTMVEAADREKVE 426
Cdd:TIGR02168 217 ELKAELRELElallvLRLEELREELEELQEELKEAEEELEELTAELQ-----------ELEEKLEELRLEVSELEEEIEE 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 427 LLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEK 506
Cdd:TIGR02168 286 LQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEA 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 507 DLALRVQEVAELRRRLESNKPAgdvdmSLSLLQEISSLQEKLEVTRTdhqrEITSLKEHFG-AREETHQKEIKALYTATE 585
Cdd:TIGR02168 366 ELEELESRLEELEEQLETLRSK-----VAQLELQIASLNNEIERLEA----RLERLEDRRErLQQEIEELLKKLEEAELK 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 586 KLSKENESLKSKLEHANKENSDVIAlwksKLETAIASHQQAMEELkVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIEN 665
Cdd:TIGR02168 437 ELQAELEELEEELEELQEELERLEE----ALEELREELEEAEQAL-DAAERELAQLQARLDSLERLQENLEGFSEGVKAL 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 666 LQNQQD------------SERAAHAKEME-ALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEdtLNKLQEAEIKVK 732
Cdd:TIGR02168 512 LKNQSGlsgilgvlseliSVDEGYEAAIEaALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLP--LDSIKGTEIQGN 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 733 ELEVLQAK--CNEQTKVIDNFTSQLKATEEKLLDL--------DALRKASSEGKSEM-------------------KKLR 783
Cdd:TIGR02168 590 DREILKNIegFLGVAKDLVKFDPKLRKALSYLLGGvlvvddldNALELAKKLRPGYRivtldgdlvrpggvitggsAKTN 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 784 QQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSM 863
Cdd:TIGR02168 670 SSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERI 749
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 864 QETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKfrekdereeqlikaKEKLENDIAEIMKMSGDNSSQLTKMNDELRLK 943
Cdd:TIGR02168 750 AQLSKELTELEAEIEELEERLEEAEEELAEAEAE--------------IEELEAQIEQLKEELKALREALDELRAELTLL 815
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 944 ERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQeaakkheeEKKELERKLSDLEKKMETSHNQCQELKARYERAtS 1023
Cdd:TIGR02168 816 NEEAANLRERLESLERRIAATERRLEDLEEQIEELSE--------DIESLAAEIEELEELIEELESELEALLNERASL-E 886
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1024 ETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKA------AQTAEDAMQIMEQMTKEKTETLAS 1097
Cdd:TIGR02168 887 EALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVridnlqERLSEEYSLTLEEAEALENKIEDD 966
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*.
gi 4506751 1098 LEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQA 1153
Cdd:TIGR02168 967 EEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEA 1022
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
693-1311 |
1.50e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 95.51 E-value: 1.50e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 693 KEKENSLEAIRSKLDKAEDQhLVEMEDTLNKLQ------------EAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEE 760
Cdd:TIGR02168 175 KETERKLERTRENLDRLEDI-LNELERQLKSLErqaekaerykelKAELRELELALLVLRLEELREELEELQEELKEAEE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 761 KLLDLDA-----------LRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLS 829
Cdd:TIGR02168 254 ELEELTAelqeleekleeLRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLD 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 830 EVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLI 909
Cdd:TIGR02168 334 ELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLE 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 910 KAKEKLENDIAEIMKMSGDNSSQLTKMndELRLKERDVEELQLKLTKANENASFLQKSIEdmtvKAEQSQQEAAKKHEEE 989
Cdd:TIGR02168 414 DRRERLQQEIEELLKKLEEAELKELQA--ELEELEEELEELQEELERLEEALEELREELE----EAEQALDAAERELAQL 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 990 KKELERKLSDLEKKMETSHNQCQELKARYERA------------TSETKTKHEEILQ-NLQKTLLDTEDKLKGA----RE 1052
Cdd:TIGR02168 488 QARLDSLERLQENLEGFSEGVKALLKNQSGLSgilgvlselisvDEGYEAAIEAALGgRLQAVVVENLNAAKKAiaflKQ 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1053 ENSG-----LLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLE---------DTKQTNAKLQNELD----- 1113
Cdd:TIGR02168 568 NELGrvtflPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSyllggvlvvDDLDNALELAKKLRpgyri 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1114 -TL------------KENNLKNVEELNKSKELLTVEnQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRD 1180
Cdd:TIGR02168 648 vTLdgdlvrpggvitGGSAKTNSSILERRREIEELE-EKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSR 726
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1181 EVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAK---- 1256
Cdd:TIGR02168 727 QISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALReald 806
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 4506751 1257 SLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQ 1311
Cdd:TIGR02168 807 ELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEI 861
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
428-1225 |
3.52e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 91.27 E-value: 3.52e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 428 LNQLEEEKRKVEDLQFRVEEESITKGDLETqtklehARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKD 507
Cdd:TIGR02168 202 LKSLERQAEKAERYKELKAELRELELALLV------LRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 508 LALRVQEVAELRRRLesnkpagdvdmsLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEkL 587
Cdd:TIGR02168 276 VSELEEEIEELQKEL------------YALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAE-L 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 588 SKENESLKSKLEHANKENSDVIALWKSkLETAIASHQQAMEELKVSFSKGLGTETAEFAEL------KTQIEKMRLDYQH 661
Cdd:TIGR02168 343 EEKLEELKEELESLEAELEELEAELEE-LESRLEELEEQLETLRSKVAQLELQIASLNNEIerlearLERLEDRRERLQQ 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 662 EIE-NLQNQQDSERAAHAKEMEALRAKLMKVIKEKENsLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAK 740
Cdd:TIGR02168 422 EIEeLLKKLEEAELKELQAELEELEEELEELQEELER-LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQEN 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 741 cneqtkvIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAA-EKQIKHLEIEKNAESSKA-SSITRELQGR- 817
Cdd:TIGR02168 501 -------LEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAAlGGRLQAVVVENLNAAKKAiAFLKQNELGRv 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 818 ---ELKLTNLQENLSEVSQVKETLEKELQILKE--KFAEASEEAVS-------VQRSMQETVNKLHQKEEQFNMLSSD-- 883
Cdd:TIGR02168 574 tflPLDSIKGTEIQGNDREILKNIEGFLGVAKDlvKFDPKLRKALSyllggvlVVDDLDNALELAKKLRPGYRIVTLDgd 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 884 -------------------------LEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMND 938
Cdd:TIGR02168 654 lvrpggvitggsaktnssilerrreIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRK 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 939 ELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKkelerklsDLEKKMETSHNQCQELKARY 1018
Cdd:TIGR02168 734 DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIE--------ELEAQIEQLKEELKALREAL 805
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1019 ERATSETKTKHEEiLQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQtaEDAMQIMEQMTKEKTETLASL 1098
Cdd:TIGR02168 806 DELRAELTLLNEE-AANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEI--EELEELIEELESELEALLNER 882
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1099 EDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRS 1178
Cdd:TIGR02168 883 ASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENK 962
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 4506751 1179 RDEvtSHQKLEEERSVLNNQLLEM--------------KKRE---SKFIKDADEEKASLQKSIS 1225
Cdd:TIGR02168 963 IED--DEEEARRRLKRLENKIKELgpvnlaaieeyeelKERYdflTAQKEDLTEAKETLEEAIE 1024
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
549-1302 |
6.73e-18 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 90.59 E-value: 6.73e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 549 EVTRTDHQREITSLKEHFGAREETHQKEIKALytatEKLSKENESLKsKLEHANKENSDVIALWKSKLETAIASHQQAME 628
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAFGKAEEAKKTETGKA----EEARKAEEAKK-KAEDARKAEEARKAEDARKAEEARKAEDAKRV 1154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 629 ELKVSFSKGLGTETAEFAELKTQIEKMRldyqhEIENLQNQQDSERAAHAKEMEALRAKlmkvikEKENSLEAIRSKLDK 708
Cdd:PTZ00121 1155 EIARKAEDARKAEEARKAEDAKKAEAAR-----KAEEVRKAEELRKAEDARKAEAARKA------EEERKAEEARKAEDA 1223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 709 AEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEA 788
Cdd:PTZ00121 1224 KKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKK 1303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 789 AEKQIKHLEIEKNAESSKASSITRELQGRELKL-TNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETV 867
Cdd:PTZ00121 1304 ADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKkAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAA 1383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 868 NKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKE--- 944
Cdd:PTZ00121 1384 KKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEeak 1463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 945 ------RDVEELQLKLTKANEnASFLQKSIEDMTVKAEQSQQEAAKKH-EEEKKELERKLSDLEKKMETSHNQCQELKAR 1017
Cdd:PTZ00121 1464 kkaeeaKKADEAKKKAEEAKK-ADEAKKKAEEAKKKADEAKKAAEAKKkADEAKKAEEAKKADEAKKAEEAKKADEAKKA 1542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1018 YERATSETKTKHEEILQNLQKTLLDTEDKlkgAREENSGLLQELEELRkQADKAKaaqtAEDAMQIMEQMTKEKTETLAS 1097
Cdd:PTZ00121 1543 EEKKKADELKKAEELKKAEEKKKAEEAKK---AEEDKNMALRKAEEAK-KAEEAR----IEEVMKLYEEEKKMKAEEAKK 1614
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1098 LEDTKQTNAKLQNEldtlkENNLKNVEELNKSKElltVENQKMEEFRKEIETLKQAAAQKSQQlsalQEENVKLAEELGR 1177
Cdd:PTZ00121 1615 AEEAKIKAEELKKA-----EEEKKKVEQLKKKEA---EEKKKAEELKKAEEENKIKAAEEAKK----AEEDKKKAEEAKK 1682
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1178 SRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASlQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKS 1257
Cdd:PTZ00121 1683 AEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKA-EEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAH 1761
|
730 740 750 760
....*....|....*....|....*....|....*....|....*
gi 4506751 1258 LHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQAD 1302
Cdd:PTZ00121 1762 LKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDN 1806
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
352-922 |
1.56e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 88.84 E-value: 1.56e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 352 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDG---HDQHVLELEAKMDQLRTMVEAADREKVELL 428
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEeyeLLAELARLEQDIARLEERRRELEERLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 429 NQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDL 508
Cdd:COG1196 323 EELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQL 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 509 ALRVQEVAELRRRLESNKpagdvDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLS 588
Cdd:COG1196 403 EELEEAEEALLERLERLE-----EELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEA 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 589 KENESLKSKLEHANKENSDVIALWK--SKLETAIASHQQA-MEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIEN 665
Cdd:COG1196 478 ALAELLEELAEAAARLLLLLEAEADyeGFLEGVKAALLLAgLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDE 557
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 666 -LQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQ 744
Cdd:COG1196 558 vAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALR 637
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 745 TKVIDNFTsqlkaTEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNL 824
Cdd:COG1196 638 RAVTLAGR-----LREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEA 712
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 825 QENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnmLSSDLEKLRENLADM---------- 894
Cdd:COG1196 713 EEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEE---LERELERLEREIEALgpvnllaiee 789
|
570 580 590
....*....|....*....|....*....|..
gi 4506751 895 ----EAKFREKDEREEQLIKAKEKLENDIAEI 922
Cdd:COG1196 790 yeelEERYDFLSEQREDLEEARETLEEAIEEI 821
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
649-1344 |
4.30e-16 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 84.40 E-value: 4.30e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 649 KTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKV------IKEKENSLEAIRSKLDKAEDQHLVEMEDTLN 722
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLqtklqeMQMERDAMADIRRRESQSQEDLRNQLQNTVH 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 723 KLQEAE-IKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDAL--RKASSEGKSEMKKLRQQLEAAEKQIKHLEIE 799
Cdd:pfam15921 153 ELEAAKcLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEAsgKKIYEHDSMSTMHFRSLGSAISKILRELDTE 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 800 KNAESSKASSITRELQGRELKLTN-----LQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQ----ETVNKL 870
Cdd:pfam15921 233 ISYLKGRIFPVEDQLEALKSESQNkiellLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEiiqeQARNQN 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 871 HQKEEQFNMLSSDLEKLRENLADMEAKFREK-DEREEQLIKAKEKLENDIAE---IMKMSGDNSSQLTKMNDEL--RLKE 944
Cdd:pfam15921 313 SMYMRQLSDLESTVSQLRSELREAKRMYEDKiEELEKQLVLANSELTEARTErdqFSQESGNLDDQLQKLLADLhkREKE 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 945 RDVEELQLKL-----TKANENASFLQKSIEDMTVKAEQsqqeaakkheeekkelerklsdLEKKMETSHNQCQelkARYE 1019
Cdd:pfam15921 393 LSLEKEQNKRlwdrdTGNSITIDHLRRELDDRNMEVQR----------------------LEALLKAMKSECQ---GQME 447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1020 RATSETKTKHE--EILQNLQKTLLDTEDKLKGAREENSGLLQELEEL-RKQADKAKAAQTAEDAMqimEQMTKEKTETLA 1096
Cdd:pfam15921 448 RQMAAIQGKNEslEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSeRTVSDLTASLQEKERAI---EATNAEITKLRS 524
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1097 SLEDTKQTNAKLQNEldtlkENNLKNVE-ELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEEL 1175
Cdd:pfam15921 525 RVDLKLQELQHLKNE-----GDHLRNVQtECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEI 599
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1176 GRSRDEVTSHQKLEEERsvlNNQLLEMKKReskfIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGE-NAS 1254
Cdd:pfam15921 600 NDRRLELQEFKILKDKK---DAKIRELEAR----VSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNElNSL 672
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1255 AKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQIDFLNSVIVdlQRKNQD-LKMKV 1333
Cdd:pfam15921 673 SEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITA--KRGQIDaLQSKI 750
|
730
....*....|.
gi 4506751 1334 EMMSEAALNGN 1344
Cdd:pfam15921 751 QFLEEAMTNAN 761
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
373-1151 |
5.74e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 83.96 E-value: 5.74e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 373 LERAEVAKATSHVGEIEQELALARDGHD---QHVLELEAKMDQLRTMVE--AADREKVELLNQLEEEKRKVEdlqfrVEE 447
Cdd:TIGR02169 153 VERRKIIDEIAGVAEFDRKKEKALEELEeveENIERLDLIIDEKRQQLErlRREREKAERYQALLKEKREYE-----GYE 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 448 ESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRVQ-EVAELRRRLESNK 526
Cdd:TIGR02169 228 LLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKeKIGELEAEIASLE 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 527 PAgdVDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEhfgaREETHQKEIKALYTATEKLSKENESLKSKLEHANKENs 606
Cdd:TIGR02169 308 RS--IAEKERELEDAEERLAKLEAEIDKLLAEIEELER----EIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEF- 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 607 dviALWK---SKLETAIASHQQAMEELKVSFSKGLGTE---TAEFAELKTQIEKmrldyqheIENLQNQQDSERAAHAKE 680
Cdd:TIGR02169 381 ---AETRdelKDYREKLEKLKREINELKRELDRLQEELqrlSEELADLNAAIAG--------IEAKINELEEEKEDKALE 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 681 MEALRAKLMKVIKEK---ENSLEAIRSKLDKAEDqhlvEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDN------- 750
Cdd:TIGR02169 450 IKKQEWKLEQLAADLskyEQELYDLKEEYDRVEK----ELSKLQRELAEAEAQARASEERVRGGRAVEEVLKAsiqgvhg 525
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 751 FTSQLKATEEK----------------LLDLDALRKASSEGKSEMK----------KLR--------------------- 783
Cdd:TIGR02169 526 TVAQLGSVGERyataievaagnrlnnvVVEDDAVAKEAIELLKRRKagratflplnKMRderrdlsilsedgvigfavdl 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 784 ----QQLEAAEKQI-KHLEIEKNAESS------------------KASSIT---RELQGRELKLTNLQENLSEVSQVKET 837
Cdd:TIGR02169 606 vefdPKYEPAFKYVfGDTLVVEDIEAArrlmgkyrmvtlegelfeKSGAMTggsRAPRGGILFSRSEPAELQRLRERLEG 685
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 838 LEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEN 917
Cdd:TIGR02169 686 LKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEA 765
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 918 DIAEIMKMSGDNSSQLTKMNDELRlkERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKkheeekkelerkl 997
Cdd:TIGR02169 766 RIEELEEDLHKLEEALNDLEARLS--HSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEY------------- 830
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 998 sdLEKKMETSHNQCQELKAR---YERATSETKTKHEEI---LQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKA 1071
Cdd:TIGR02169 831 --LEKEIQELQEQRIDLKEQiksIEKEIENLNGKKEELeeeLEELEAALRDLESRLGDLKKERDELEAQLRELERKIEEL 908
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1072 KAaqTAEDAMQIMEQMT--------------------KEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEE------ 1125
Cdd:TIGR02169 909 EA--QIEKKRKRLSELKaklealeeelseiedpkgedEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEyeevlk 986
|
890 900 910
....*....|....*....|....*....|
gi 4506751 1126 ----LNKSKELLTVENQKMEEFRKEIETLK 1151
Cdd:TIGR02169 987 rldeLKEKRAKLEEERKAILERIEEYEKKK 1016
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
456-1329 |
1.39e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.80 E-value: 1.39e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 456 ETQTKLEHAR---------IKELEQSLLFEKTKADKLQRELEdtrvatvsEKSRIMELEKDL-ALRVQEVAELRRRLESn 525
Cdd:TIGR02168 176 ETERKLERTRenldrlediLNELERQLKSLERQAEKAERYKE--------LKAELRELELALlVLRLEELREELEELQE- 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 526 kpagDVDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEhfgaREETHQKEIKALYTATEKLSKENESLKSKLEHANKEN 605
Cdd:TIGR02168 247 ----ELKEAEEELEELTAELQELEEKLEELRLEVSELEE----EIEELQKELYALANEISRLEQQKQILRERLANLERQL 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 606 SdvialwksKLETAIASHQQAMEELKVSFSKglgtETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAhAKEMEALR 685
Cdd:TIGR02168 319 E--------ELEAQLEELESKLDELAEELAE----LEEKLEELKEELESLEAELEELEAELEELESRLEEL-EEQLETLR 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 686 AKlmkvIKEKENSLEAIRSKLDKAEDQ-----HLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEE 760
Cdd:TIGR02168 386 SK----VAQLELQIASLNNEIERLEARlerleDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEE 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 761 KLldlDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRElKLTNLQENLSEVSQVKETLEK 840
Cdd:TIGR02168 462 AL---EELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQS-GLSGILGVLSELISVDEGYEA 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 841 ELQILKEKFAEASeeAVSVQRSMQETVNKLHQKEEQFNML----SSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLE 916
Cdd:TIGR02168 538 AIEAALGGRLQAV--VVENLNAAKKAIAFLKQNELGRVTFlpldSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLR 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 917 NDIAEIMkmSG----DNSSQLTKMNDELRLKERDV-----------------EELQLKLTKANENASFLQKSIEDMTVKA 975
Cdd:TIGR02168 616 KALSYLL--GGvlvvDDLDNALELAKKLRPGYRIVtldgdlvrpggvitggsAKTNSSILERRREIEELEEKIEELEEKI 693
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 976 EQSQQEAAKKHEEEKKELERKlSDLEKKMETSHNQCQELKARYERATSETKtKHEEILQNLQKTLLDTEDKLKGAREENS 1055
Cdd:TIGR02168 694 AELEKALAELRKELEELEEEL-EQLRKELEELSRQISALRKDLARLEAEVE-QLEERIAQLSKELTELEAEIEELEERLE 771
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1056 GLLQELEELRkqADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTV 1135
Cdd:TIGR02168 772 EAEEELAEAE--AEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEE 849
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1136 ENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELgrsrdevtshQKLEEERSVLNNQLLEMKKRESKFIKDADE 1215
Cdd:TIGR02168 850 LSEDIESLAAEIEELEELIEELESELEALLNERASLEEAL----------ALLRSELEELSEELRELESKRSELRRELEE 919
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1216 EKASLQKSISITSALLTEKDAELEKLRNEVTVLrGENASAKslhsvVQTLESDKVKLELKVKNLELQLKEnkrqlsssSG 1295
Cdd:TIGR02168 920 LREKLAQLELRLEGLEVRIDNLQERLSEEYSLT-LEEAEAL-----ENKIEDDEEEARRRLKRLENKIKE--------LG 985
|
890 900 910
....*....|....*....|....*....|....
gi 4506751 1296 NTDTQADEDERAQESQIDFLNSVIVDLQRKNQDL 1329
Cdd:TIGR02168 986 PVNLAAIEEYEELKERYDFLTAQKEDLTEAKETL 1019
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
643-1291 |
1.74e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 82.42 E-value: 1.74e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 643 AEFAELKTQIEKMRLDYQHEIENLQNQQDsERAaHAKEMEALRAKLMKV-IKEKENSLEAIRSKLDKAEDQhLVEMEDTL 721
Cdd:TIGR02169 177 EELEEVEENIERLDLIIDEKRQQLERLRR-ERE-KAERYQALLKEKREYeGYELLKEKEALERQKEAIERQ-LASLEEEL 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 722 NKLQ-EAEIKVKELEVLQAKCNEQTKVIDNFTS-QLKATEEKLLDLDALRkASSEGKSEMKKlrQQLEAAEKQIKHLEIE 799
Cdd:TIGR02169 254 EKLTeEISELEKRLEEIEQLLEELNKKIKDLGEeEQLRVKEKIGELEAEI-ASLERSIAEKE--RELEDAEERLAKLEAE 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 800 KNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLH-------Q 872
Cdd:TIGR02169 331 IDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINelkreldR 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 873 KEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQL 952
Cdd:TIGR02169 411 LQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQR 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 953 KLTKANENASFLQKS------------------------------------------------IEDMTVKAEQSQQEAAK 984
Cdd:TIGR02169 491 ELAEAEAQARASEERvrggraveevlkasiqgvhgtvaqlgsvgeryataievaagnrlnnvvVEDDAVAKEAIELLKRR 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 985 KHEEEKKELERKLSDLEKKMETSHNQCQ--------ELKARYERATS---------ETKTKHEEILQNLQKTLLDTEDKL 1047
Cdd:TIGR02169 571 KAGRATFLPLNKMRDERRDLSILSEDGVigfavdlvEFDPKYEPAFKyvfgdtlvvEDIEAARRLMGKYRMVTLEGELFE 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1048 K------GAREENSGLL---QELEELRKQADKAKAAQTAEDAMQI-MEQMTKEKTETLASLEDTKQTNAKLQNELDTLKE 1117
Cdd:TIGR02169 651 KsgamtgGSRAPRGGILfsrSEPAELQRLRERLEGLKRELSSLQSeLRRIENRLDELSQELSDASRKIGEIEKEIEQLEQ 730
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1118 NNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSR-DEVTSH-QKLEEERSVL 1195
Cdd:TIGR02169 731 EEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRiPEIQAElSKLEEEVSRI 810
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1196 NNQLLEMKKRESK-----------------FIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGEnasAKSL 1258
Cdd:TIGR02169 811 EARLREIEQKLNRltlekeylekeiqelqeQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESR---LGDL 887
|
730 740 750
....*....|....*....|....*....|...
gi 4506751 1259 HSVVQTLESDKVKLELKVKNLELQLKENKRQLS 1291
Cdd:TIGR02169 888 KKERDELEAQLRELERKIEELEAQIEKKRKRLS 920
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
716-1293 |
2.12e-15 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 81.61 E-value: 2.12e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 716 EMEDTLNKLQ-EAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDL-----------DALRKASSEGKSEMKKLR 783
Cdd:TIGR04523 37 QLEKKLKTIKnELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLndklkknkdkiNKLNSDLSKINSEIKNDK 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 784 QQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEaseeavsvqrsM 863
Cdd:TIGR04523 117 EQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLN-----------I 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 864 QETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLK 943
Cdd:TIGR04523 186 QKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKI 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 944 ERDVEELQLKLTKANENASFLQKSIEDMTVKAE----QSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYE 1019
Cdd:TIGR04523 266 KKQLSEKQKELEQNNKKIKELEKQLNQLKSEISdlnnQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQIS 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1020 RATSETKTKHEEIlQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADK-----AKAAQTAEDAMQIMEQMTKEKTET 1094
Cdd:TIGR04523 346 QLKKELTNSESEN-SEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDleskiQNQEKLNQQKDEQIKKLQQEKELL 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1095 LASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAA-------AQKSQQLSALQEE 1167
Cdd:TIGR04523 425 EKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLeqkqkelKSKEKELKKLNEE 504
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1168 NVKLAEELGRSRDEVTS----HQKLEEERSVLNNQLlemKKRESKFIKDADEEKASLQKSIsitsalLTEKDAELEKLRN 1243
Cdd:TIGR04523 505 KKELEEKVKDLTKKISSlkekIEKLESEKKEKESKI---SDLEDELNKDDFELKKENLEKE------IDEKNKEIEELKQ 575
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 4506751 1244 EVTVLRGENASAKSLhsvVQTLESDKVKLELKVKNLELQLKENKRQLSSS 1293
Cdd:TIGR04523 576 TQKSLKKKQEEKQEL---IDQKEKEKKDLIKEIEEKEKKISSLEKELEKA 622
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
456-1285 |
2.47e-15 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 81.94 E-value: 2.47e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 456 ETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRL-ESNKPAGDVDMS 534
Cdd:pfam02463 173 EALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIdLLQELLRDEQEE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 535 LSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSdvialwks 614
Cdd:pfam02463 253 IESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKK-------- 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 615 KLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQdsERAAHAKEMEALRAKLMKVIKE 694
Cdd:pfam02463 325 KAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKK--LESERLSSAAKLKEEELELKSE 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 695 KENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEikvKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSE 774
Cdd:pfam02463 403 EEKEAQLLLELARQLEDLLKEEKKEELEILEEEE---ESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQL 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 775 GKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKltnlqenlsevsqVKETLEKELQILKEKFAEASE 854
Cdd:pfam02463 480 VKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRII-------------SAHGRLGDLGVAVENYKVAIS 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 855 EAVSVQRSmQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLT 934
Cdd:pfam02463 547 TAVIVEVS-ATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVV 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 935 KMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQEL 1014
Cdd:pfam02463 626 EGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKE 705
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1015 KARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTET 1094
Cdd:pfam02463 706 QREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEK 785
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1095 LASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEE 1174
Cdd:pfam02463 786 LKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITK 865
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1175 LGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALL-TEKDAELEKLRNEVTVLRGENA 1253
Cdd:pfam02463 866 EELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERiKEEAEILLKYEEEPEELLLEEA 945
|
810 820 830
....*....|....*....|....*....|..
gi 4506751 1254 SAKSLhsvvqtLESDKVKLELKVKNLELQLKE 1285
Cdd:pfam02463 946 DEKEK------EENNKEEEEERNKRLLLAKEE 971
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
344-956 |
6.13e-15 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 80.96 E-value: 6.13e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 344 ARKISGTTALQEALKE-----KQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlaRDGHDQHVLELEAKMDQLRtmvE 418
Cdd:PTZ00121 1223 AKKAEAVKKAEEAKKDaeeakKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEA--RKADELKKAEEKKKADEAK---K 1297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 419 AADREKVELLNQLEEEKRKVEDLQFRVEE------------ESITKGDlETQTKLEHARIKELEQSLlfEKTKADKLQRE 486
Cdd:PTZ00121 1298 AEEKKKADEAKKKAEEAKKADEAKKKAEEakkkadaakkkaEEAKKAA-EAAKAEAEAAADEAEAAE--EKAEAAEKKKE 1374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 487 LEDTRVATV----SEKSRIMELEKDLALRVQEVAELRRRLESNKPAGDVDMSLSLLQEISSLQEKLEVTR----TDHQRE 558
Cdd:PTZ00121 1375 EAKKKADAAkkkaEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKkadeAKKKAE 1454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 559 ITSLKEHFGAREETHQKEIKALYTATEKlsKENESLKSKLEHANKENSDviaLWKSKLETAIASHQQAMEELKVSFSKGL 638
Cdd:PTZ00121 1455 EAKKAEEAKKKAEEAKKADEAKKKAEEA--KKADEAKKKAEEAKKKADE---AKKAAEAKKKADEAKKAEEAKKADEAKK 1529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 639 GTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEME 718
Cdd:PTZ00121 1530 AEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKA 1609
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 719 DTLNKLQEAEIKVKELEvlqaKCNEQTKVIDNFTsqlKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEI 798
Cdd:PTZ00121 1610 EEAKKAEEAKIKAEELK----KAEEEKKKVEQLK---KKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKK 1682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 799 EKNAESSKASSITRELQGRElKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFN 878
Cdd:PTZ00121 1683 AEEDEKKAAEALKKEAEEAK-KAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAH 1761
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 4506751 879 MLSSDLEKLRENLADMEAKFrekderEEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTK 956
Cdd:PTZ00121 1762 LKKEEEKKAEEIRKEKEAVI------EEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIK 1833
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
692-1336 |
8.66e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.98 E-value: 8.66e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 692 IKEKENSLEAIRSKLDKAEDqHLVEMEDTLNKLQE------------AEIKVKELEVLQAKCNEQTKVIDNFTSQLKATE 759
Cdd:COG1196 174 KEEAERKLEATEENLERLED-ILGELERQLEPLERqaekaeryrelkEELKELEAELLLLKLRELEAELEELEAELEELE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 760 EKLldlDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLE 839
Cdd:COG1196 253 AEL---EELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELE 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 840 KELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnmlssdLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDI 919
Cdd:COG1196 330 EELEELEEELEELEEELEEAEEELEEAEAELAEAEEA-------LLEAEAELAEAEEELEELAEELLEALRAAAELAAQL 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 920 AEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANEnasflqksiedmtvkAEQSQQEAAKKHEEEKKELERKLSD 999
Cdd:COG1196 403 EELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEE---------------ALEEAAEEEAELEEEEEALLELLAE 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1000 LEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKtllDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAED 1079
Cdd:COG1196 468 LLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGF---LEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAAL 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1080 AMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELnkskelltVENQKMEEFRKEIETLKQAAAQKSQ 1159
Cdd:COG1196 545 AAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAA--------LARGAIGAAVDLVASDLREADARYY 616
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1160 QLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELE 1239
Cdd:COG1196 617 VLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELE 696
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1240 KLRNEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQIDflnsvi 1319
Cdd:COG1196 697 EALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELE------ 770
|
650
....*....|....*..
gi 4506751 1320 vdlqrknqDLKMKVEMM 1336
Cdd:COG1196 771 --------RLEREIEAL 779
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
345-1130 |
1.76e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 78.96 E-value: 1.76e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 345 RKISGTTALQEALKEKQQHIEQLLAE-----RDLERAEVAKATSHVGEIEQELALARDGHD---QHVLELEAKMDQLRTM 416
Cdd:TIGR02169 251 EELEKLTEEISELEKRLEEIEQLLEElnkkiKDLGEEEQLRVKEKIGELEAEIASLERSIAekeRELEDAEERLAKLEAE 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 417 VEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRvatvS 496
Cdd:TIGR02169 331 IDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELK----R 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 497 EKSRIMELEKDLALRVQEVAELRRRLESNKPAGDVDMsLSLLQEISSLQEKLEVTRTDhqreitslkehfgarEETHQKE 576
Cdd:TIGR02169 407 ELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEK-EDKALEIKKQEWKLEQLAAD---------------LSKYEQE 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 577 IKALYTATEKLSKENESLKSKLEHANKEnsdvialwKSKLETAIASHQQAMEELKVSFSKGLGTetaefaelKTQIEKMR 656
Cdd:TIGR02169 471 LYDLKEEYDRVEKELSKLQRELAEAEAQ--------ARASEERVRGGRAVEEVLKASIQGVHGT--------VAQLGSVG 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 657 LDYQHEIE-----NLQN--QQDSERAAHA----KEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQ--HLVEMEDtlnK 723
Cdd:TIGR02169 535 ERYATAIEvaagnRLNNvvVEDDAVAKEAiellKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFavDLVEFDP---K 611
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 724 LQEAEIKVKELEVLQAKCNEQTKVIDNFtsQLKATEEKLLDLDAL----RKASSEGKSEMKKLRQQLEAAEKQIKHLEIE 799
Cdd:TIGR02169 612 YEPAFKYVFGDTLVVEDIEAARRLMGKY--RMVTLEGELFEKSGAmtggSRAPRGGILFSRSEPAELQRLRERLEGLKRE 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 800 KNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNM 879
Cdd:TIGR02169 690 LSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEE 769
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 880 LSSDLEKLRENLADMEAkfREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANE 959
Cdd:TIGR02169 770 LEEDLHKLEEALNDLEA--RLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKE 847
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 960 NASFLQKSIEDMTVKAEQSQQeAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKhEEILQNLQKT 1039
Cdd:TIGR02169 848 QIKSIEKEIENLNGKKEELEE-ELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKK-RKRLSELKAK 925
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1040 LLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMT----KEKTETLASLEDTKQTNAKLQNELDTL 1115
Cdd:TIGR02169 926 LEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNmlaiQEYEEVLKRLDELKEKRAKLEEERKAI 1005
|
810
....*....|....*
gi 4506751 1116 KEnnlkNVEELNKSK 1130
Cdd:TIGR02169 1006 LE----RIEEYEKKK 1016
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
352-922 |
2.84e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 78.05 E-value: 2.84e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 352 ALQEALKEKQqhIEQLLAERDLERAEVAKAtshvgeiEQELAlardghdqhvlELEAKMDQLRTMVEAADREKVELLNQL 431
Cdd:COG1196 217 ELKEELKELE--AELLLLKLRELEAELEEL-------EAELE-----------ELEAELEELEAELAELEAELEELRLEL 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 432 EEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALR 511
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEA 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 512 VQEVAELRRRLESnkpagDVDMSLSLLQEISSLQEKLEvTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKEN 591
Cdd:COG1196 357 EAELAEAEEALLE-----AEAELAEAEEELEELAEELL-EALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEAL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 592 ESLKSKLEHANKENSDvIALWKSKLETAIASHQQAMEELKVSFsKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQD 671
Cdd:COG1196 431 AELEEEEEEEEEALEE-AAEEEAELEEEEEALLELLAELLEEA-ALLEAALAELLEELAEAAARLLLLLEAEADYEGFLE 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 672 SERAAHAKEMEALRAKLMKVIKEKENSLE-AIRSKLDKAEDQHLVEMEDTLNK---------------LQEAEIKVKELE 735
Cdd:COG1196 509 GVKAALLLAGLRGLAGAVAVLIGVEAAYEaALEAALAAALQNIVVEDDEVAAAaieylkaakagratfLPLDKIRARAAL 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 736 VLQAKCNEQTKVIDNFTSQLKATEEK-------LLDLDALRKASSEGKSEMKKLRQQLEAAEKQikhLEIEKNAESSKAS 808
Cdd:COG1196 589 AAALARGAIGAAVDLVASDLREADARyyvlgdtLLGRTLVAARLEAALRRAVTLAGRLREVTLE---GEGGSAGGSLTGG 665
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 809 SITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLR 888
Cdd:COG1196 666 SRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEE 745
|
570 580 590
....*....|....*....|....*....|....
gi 4506751 889 ENLADMEAKFREKDEREEQLIKAKEKLENDIAEI 922
Cdd:COG1196 746 ELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
407-1221 |
4.04e-14 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 77.85 E-value: 4.04e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 407 EAKMDQLRTMVEAADREKVELLnqLEEEKRKVEDLQFRVEEES---------ITKGDLETQTKLEHARIKEleQSLLFEK 477
Cdd:pfam15921 58 EVELDSPRKIIAYPGKEHIERV--LEEYSHQVKDLQRRLNESNelhekqkfyLRQSVIDLQTKLQEMQMER--DAMADIR 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 478 TKADKLQRELEDTRVATVSEKSRIMELEKD-LALRVQEVAELRRRLESNKpagdvdmslSLLQEISSLQEKLEVTRTDHQ 556
Cdd:pfam15921 134 RRESQSQEDLRNQLQNTVHELEAAKCLKEDmLEDSNTQIEQLRKMMLSHE---------GVLQEIRSILVDFEEASGKKI 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 557 REITSLKE-HFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENsdvialwKSKLETAIASHQQAMEELKVSFS 635
Cdd:pfam15921 205 YEHDSMSTmHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSES-------QNKIELLLQQHQDRIEQLISEHE 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 636 KGLGTETAEFAELKTQIEKMrldyQHEIENLQNQQDSERAAHakemealraklMKVIKEKENSLEAIRSKLDKAEDQHlv 715
Cdd:pfam15921 278 VEITGLTEKASSARSQANSI----QSQLEIIQEQARNQNSMY-----------MRQLSDLESTVSQLRSELREAKRMY-- 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 716 emEDTLNKLQeaeikvKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDAlrkassegksEMKKLRQQLEAAEKQIKH 795
Cdd:pfam15921 341 --EDKIEELE------KQLVLANSELTEARTERDQFSQESGNLDDQLQKLLA----------DLHKREKELSLEKEQNKR 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 796 LEIEKNAESSKASSITRELQGRELKLTNLQENLSEV-SQVKETLEKELQILKEKfAEASEEAVSVQRSMQETVNKLHQKE 874
Cdd:pfam15921 403 LWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMkSECQGQMERQMAAIQGK-NESLEKVSSLTAQLESTKEMLRKVV 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 875 EQFNMLSSDLEKLRENLADMEAKFREKDEREE----QLIKAKEKLENDIAEImkmsgdnsSQLTKMNDELRLKERDVEEL 950
Cdd:pfam15921 482 EELTAKKMTLESSERTVSDLTASLQEKERAIEatnaEITKLRSRVDLKLQEL--------QHLKNEGDHLRNVQTECEAL 553
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 951 QLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEkkelerklSDLEKKMETSHNQCQELKARYERATSETKTKHE 1030
Cdd:pfam15921 554 KLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEK--------AQLEKEINDRRLELQEFKILKDKKDAKIRELEA 625
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1031 EILQ-NLQKTLL-----DTEDKLKGAREENSGLLQELEELRKQADkakaaqTAEDAMQIMEQMTKEKTETLASLEDTKQT 1104
Cdd:pfam15921 626 RVSDlELEKVKLvnagsERLRAVKDIKQERDQLLNEVKTSRNELN------SLSEDYEVLKRNFRNKSEEMETTTNKLKM 699
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1105 NAK-LQNELDTLKeNNLKNVEELNKS--------KELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEEL 1175
Cdd:pfam15921 700 QLKsAQSELEQTR-NTLKSMEGSDGHamkvamgmQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQEL 778
|
810 820 830 840
....*....|....*....|....*....|....*....|....*.
gi 4506751 1176 GRSrdeVTSHQKLEEERSVLNNQLLEMKKRESKFikDADEEKASLQ 1221
Cdd:pfam15921 779 STV---ATEKNKMAGELEVLRSQERRLKEKVANM--EVALDKASLQ 819
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
422-917 |
1.52e-13 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 75.87 E-value: 1.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 422 REKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQ----------------R 485
Cdd:PRK03918 217 PELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEekvkelkelkekaeeyI 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 486 ELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPAGDvdmslSLLQEISSLQEKLEVTRTDHQ--REITSLK 563
Cdd:PRK03918 297 KLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLE-----ELKKKLKELEKRLEELEERHElyEEAKAKK 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 564 EhfgaREETHQKEIKALytATEKLSKENESLKSKLEHANKENSDVIALwKSKLETAIASHQQAMEELKvsfsKGLGTETA 643
Cdd:PRK03918 372 E----ELERLKKRLTGL--TPEKLEKELEELEKAKEEIEEEISKITAR-IGELKKEIKELKKAIEELK----KAKGKCPV 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 644 EFAELKTQIEKMRL-DYQHEIENLQNQQdseraahaKEMEALRAKLMKVIKEKENSLEAIR--SKLDKAEDQhLVEMEDT 720
Cdd:PRK03918 441 CGRELTEEHRKELLeEYTAELKRIEKEL--------KEIEEKERKLRKELRELEKVLKKESelIKLKELAEQ-LKELEEK 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 721 LNK--LQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQL--------EAAE 790
Cdd:PRK03918 512 LKKynLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELeelgfesvEELE 591
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 791 KQIKHLE------IEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILK-----EKFAEASEEAVSV 859
Cdd:PRK03918 592 ERLKELEpfyneyLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEkkyseEEYEELREEYLEL 671
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 4506751 860 QRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEakfrEKDEREEQLIKAKEKLEN 917
Cdd:PRK03918 672 SRELAGLRAELEELEKRREEIKKTLEKLKEELEERE----KAKKELEKLEKALERVEE 725
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
673-1280 |
2.71e-13 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 75.08 E-value: 2.71e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 673 ERAAHAkemealRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEmedtlnKLQEAEIKVKELEVLQAKCNEQ----TKVI 748
Cdd:PRK02224 169 ERASDA------RLGVERVLSDQRGSLDQLKAQIEEKEEKDLHE------RLNGLESELAELDEEIERYEEQreqaRETR 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 749 DNFTSQLKATEEKLLDLDALRKASSE--------------GKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITREL 814
Cdd:PRK02224 237 DEADEVLEEHEERREELETLEAEIEDlretiaeterereeLAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARR 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 815 QGRELKLTNLQENLSEVSQVKETLEKELQILKEKFA-------EASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKL 887
Cdd:PRK02224 317 EELEDRDEELRDRLEECRVAAQAHNEEAESLREDADdleeraeELREEAAELESELEEAREAVEDRREEIEELEEEIEEL 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 888 RENLADMEAKFREKDEREEQLIKAKEKLENDIAEimkmsgdnssqltkMNDELRLKERDVEELQLKLTKANenasflqks 967
Cdd:PRK02224 397 RERFGDAPVDLGNAEDFLEELREERDELREREAE--------------LEATLRTARERVEEAEALLEAGK--------- 453
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 968 iedmtvKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTkhEEILQNLQKTLLDTEDKL 1047
Cdd:PRK02224 454 ------CPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEA--EDRIERLEERREDLEELI 525
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1048 KGAREENSGLLQELEELRKQADKAKA-AQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKEnnlknveel 1126
Cdd:PRK02224 526 AERRETIEEKRERAEELRERAAELEAeAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRT--------- 596
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1127 nkSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRdevtshqkLEEERSVLNNQLLEMKKRE 1206
Cdd:PRK02224 597 --LLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEAR--------IEEAREDKERAEEYLEQVE 666
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 4506751 1207 SKfIKDADEEKASLQKSI-SITSALltekdAELEKLRNEVTVLRGENASAKSLHSVVQTLES--DKVKLELKVKNLE 1280
Cdd:PRK02224 667 EK-LDELREERDDLQAEIgAVENEL-----EELEELRERREALENRVEALEALYDEAEELESmyGDLRAELRQRNVE 737
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
348-961 |
2.77e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 75.09 E-value: 2.77e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 348 SGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLEL-EAKMDQLRTMVEAADREKVE 426
Cdd:TIGR02168 372 SRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLeEAELKELQAELEELEEELEE 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 427 LLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSL-----LFEKTKADKLQRELEDTRVATVSEKSRI 501
Cdd:TIGR02168 452 LQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQenlegFSEGVKALLKNQSGLSGILGVLSELISV 531
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 502 ME-----LEKDLALRVQEVAelrrrlesnkpagdVDMSLSLLQEISSLQEK-------LEVTRTDHqREITSLKEHFGAR 569
Cdd:TIGR02168 532 DEgyeaaIEAALGGRLQAVV--------------VENLNAAKKAIAFLKQNelgrvtfLPLDSIKG-TEIQGNDREILKN 596
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 570 EETHQKEIKALYTATEKLSKE----------NESLKSKLEHANKENSDVIALwksKLETAIASHQQAMEELKVSFSKGLG 639
Cdd:TIGR02168 597 IEGFLGVAKDLVKFDPKLRKAlsyllggvlvVDDLDNALELAKKLRPGYRIV---TLDGDLVRPGGVITGGSAKTNSSIL 673
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 640 TETAEFAELKTQIEKMrldyQHEIENLQNQQDSERAAHAkEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHlvemed 719
Cdd:TIGR02168 674 ERRREIEELEEKIEEL----EEKIAELEKALAELRKELE-ELEEELEQLRKELEELSRQISALRKDLARLEAEV------ 742
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 720 tLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEgksEMKKLRQQLEAAEKQIKHLEIE 799
Cdd:TIGR02168 743 -EQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKE---ELKALREALDELRAELTLLNEE 818
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 800 KNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNM 879
Cdd:TIGR02168 819 AANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEE 898
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 880 LSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEImkmsgdnssqLTKMNDELRLKERDVEELQLKLTKANE 959
Cdd:TIGR02168 899 LSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNL----------QERLSEEYSLTLEEAEALENKIEDDEE 968
|
..
gi 4506751 960 NA 961
Cdd:TIGR02168 969 EA 970
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
376-1340 |
6.21e-13 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 74.06 E-value: 6.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 376 AEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVE---AADREKVELLNQLEEEKRKVEDLQFRVEEESITK 452
Cdd:pfam01576 12 EELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETElcaEAEEMRARLAARKQELEEILHELESRLEEEEERS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 453 GDLETQTKLEHARIKELEQSLLFEKTKADKLQREledtrvaTVSEKSRIMELEKD-LALRVQEVAELRRRLESNKPAGDV 531
Cdd:pfam01576 92 QQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLE-------KVTTEAKIKKLEEDiLLLEDQNSKLSKERKLLEERISEF 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 532 DMSLSLLQEISSLQEKLevtRTDHQREITSLkehfgarEETHQKEikalytatEKLSKENESLKSKLEHANKENSDVIAL 611
Cdd:pfam01576 165 TSNLAEEEEKAKSLSKL---KNKHEAMISDL-------EERLKKE--------EKGRQELEKAKRKLEGESTDLQEQIAE 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 612 WKSKLETAIASHQQAMEELKVSFSKgLGTETAEfaelKTQIEKMRLDYQHEIENLQNQQDSERAAhakemealRAKLMKV 691
Cdd:pfam01576 227 LQAQIAELRAQLAKKEEELQAALAR-LEEETAQ----KNNALKKIRELEAQISELQEDLESERAA--------RNKAEKQ 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 692 IKEKENSLEAIRSKLDKAEDQHLVEME---------DTLNKLQEAEIKVKELEVLQAKcNEQTKVIDNFTSQLKATEEKL 762
Cdd:pfam01576 294 RRDLGEELEALKTELEDTLDTTAAQQElrskreqevTELKKALEEETRSHEAQLQEMR-QKHTQALEELTEQLEQAKRNK 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 763 LDLD----ALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETL 838
Cdd:pfam01576 373 ANLEkakqALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEA 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 839 EKelqilkeKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEND 918
Cdd:pfam01576 453 EG-------KNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQ 525
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 919 IAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLT-------KANENASFLQKSIEDMTVKAEQSQQEAakkheeekk 991
Cdd:pfam01576 526 LSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEekaaaydKLEKTKNRLQQELDDLLVDLDHQRQLV--------- 596
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 992 elerklSDLEKKMETSHNQCQELK---ARY----ERATSETKTKHEEILqNLQKTLLDTEDKLKGAREENSGLLQELEEL 1064
Cdd:pfam01576 597 ------SNLEKKQKKFDQMLAEEKaisARYaeerDRAEAEAREKETRAL-SLARALEEALEAKEELERTNKQLRAEMEDL 669
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1065 -RKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQT--NAKLQNE-----LDTLKENNLKNVEELNKSKELLTVe 1136
Cdd:pfam01576 670 vSSKDDVGKNVHELERSKRALEQQVEEMKTQLEELEDELQAteDAKLRLEvnmqaLKAQFERDLQARDEQGEEKRRQLV- 748
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1137 nQKMEEFRKEIETLK----QAAAQKSQQLSALQEENVKLaEELGRSRDE-VTSHQKLEEERSVLNNQLLEMK-KRESKFI 1210
Cdd:pfam01576 749 -KQVRELEAELEDERkqraQAVAAKKKLELDLKELEAQI-DAANKGREEaVKQLKKLQAQMKDLQRELEEARaSRDEILA 826
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1211 KDADEEKASlqKSISITSALLTEKDAELEKLRNEVTVLRGE-------NASAKSLhsvvqtLESDKVKLELKVKNLELQL 1283
Cdd:pfam01576 827 QSKESEKKL--KNLEAELLQLQEDLAASERARRQAQQERDEladeiasGASGKSA------LQDEKRRLEARIAQLEEEL 898
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 4506751 1284 KENKrqlssssGNTDTQADEDERAQeSQIDFLNSVIV--------------DLQRKNQDLKMKVEMMSEAA 1340
Cdd:pfam01576 899 EEEQ-------SNTELLNDRLRKST-LQVEQLTTELAaerstsqksesarqQLERQNKELKAKLQEMEGTV 961
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
212-272 |
7.03e-13 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 73.18 E-value: 7.03e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 4506751 212 LKIGDRVLVGGTKaGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLF 272
Cdd:COG5244 4 LSVNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIF 63
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
357-895 |
1.44e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 72.84 E-value: 1.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 357 LKEKQQHIEQLLAERDLE----RAEVAKATSHVGEIEQELALARDG-------HDQHVLELEAKMDQLRTMVEAADREKV 425
Cdd:pfam15921 262 LQQHQDRIEQLISEHEVEitglTEKASSARSQANSIQSQLEIIQEQarnqnsmYMRQLSDLESTVSQLRSELREAKRMYE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 426 ELLNQLEEE--KRKVEDLQFRVEEESITK--GDLETQTKLEHARIKELEQSLLFEKTK--------------ADKLQREL 487
Cdd:pfam15921 342 DKIEELEKQlvLANSELTEARTERDQFSQesGNLDDQLQKLLADLHKREKELSLEKEQnkrlwdrdtgnsitIDHLRREL 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 488 EDTRVATVSEKSRIM--------ELEKDLAL------RVQEVAELRRRLESNKpagdvDMSLSLLQEISSLQEKLEVTRT 553
Cdd:pfam15921 422 DDRNMEVQRLEALLKamksecqgQMERQMAAiqgkneSLEKVSSLTAQLESTK-----EMLRKVVEELTAKKMTLESSER 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 554 DHQREITSLKEHFGAREETHqKEIKALYTATEKLSKENESLKSKLEHANKENSDVIAL-----WKSKLETAIASHQQAME 628
Cdd:pfam15921 497 TVSDLTASLQEKERAIEATN-AEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALklqmaEKDKVIEILRQQIENMT 575
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 629 ELKVSFSKGLGTETAEFAELKTQIEKMRLDYQhEIENLQNQQDS---ERAAHAKEMEALRAKLMKVIKEKENSLEAIRSK 705
Cdd:pfam15921 576 QLVGQHGRTAGAMQVEKAQLEKEINDRRLELQ-EFKILKDKKDAkirELEARVSDLELEKVKLVNAGSERLRAVKDIKQE 654
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 706 ldkaEDQHLVEMEDTLNKLQEAEikvKELEVLQAKCNEQTKVIDNFTSQLKAteeklldldalrkassegksEMKKLRQQ 785
Cdd:pfam15921 655 ----RDQLLNEVKTSRNELNSLS---EDYEVLKRNFRNKSEEMETTTNKLKM--------------------QLKSAQSE 707
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 786 LEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQE 865
Cdd:pfam15921 708 LEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNK 787
|
570 580 590
....*....|....*....|....*....|
gi 4506751 866 TVNKLHqkeeqfnMLSSDLEKLRENLADME 895
Cdd:pfam15921 788 MAGELE-------VLRSQERRLKEKVANME 810
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
679-1240 |
2.45e-12 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 71.59 E-value: 2.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 679 KEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLvEMEDTLNKLqEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKAT 758
Cdd:TIGR04523 134 KENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKE-ELENELNLL-EKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQ 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 759 EEKLL--DLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKE 836
Cdd:TIGR04523 212 KNKSLesQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLN 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 837 TLEKELQILKEKFA-----EASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKA 911
Cdd:TIGR04523 292 QLKSEISDLNNQKEqdwnkELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNE 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 912 KEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQsQQEAAKKHEEEKK 991
Cdd:TIGR04523 372 IEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIK-NNSEIKDLTNQDS 450
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 992 ELERKLSDLEKKMETSHNQCQELKARYERATSEtktkheeiLQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKA 1071
Cdd:TIGR04523 451 VKELIIKNLDNTRESLETQLKVLSRSINKIKQN--------LEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSL 522
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1072 KAAQTA-EDAMQIMEQMTKEKTETLASLEDTKQTNA------KLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFR 1144
Cdd:TIGR04523 523 KEKIEKlESEKKEKESKISDLEDELNKDDFELKKENlekeidEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLI 602
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1145 KEIETLKQAAAQKSQQLSALQEENVKLAEELgrsRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSI 1224
Cdd:TIGR04523 603 KEIEEKEKKISSLEKELEKAKKENEKLSSII---KNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKIDDII 679
|
570
....*....|....*.
gi 4506751 1225 SITSALLTEKDAELEK 1240
Cdd:TIGR04523 680 ELMKDWLKELSLHYKK 695
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
883-1292 |
3.44e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 71.25 E-value: 3.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 883 DLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENAS 962
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKE 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 963 FL-QKSIEDMTVKAE-QSQQEAAKKHEEEKKELERKLSDLEKKMETShNQCQELKARYERaTSETKTKHEEILQNLQKTL 1040
Cdd:PRK03918 239 EIeELEKELESLEGSkRKLEEKIRELEERIEELKKEIEELEEKVKEL-KELKEKAEEYIK-LSEFYEEYLDELREIEKRL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1041 LDTEDKLKGAREENSGL------LQELEELRKQADKAKA-----AQTAEDAMQIMEQMTKEKTETlasledTKQTNAKLQ 1109
Cdd:PRK03918 317 SRLEEEINGIEERIKELeekeerLEELKKKLKELEKRLEeleerHELYEEAKAKKEELERLKKRL------TGLTPEKLE 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1110 NELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEEN-----VKLAEELGRSRDEVts 1184
Cdd:PRK03918 391 KELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHrkellEEYTAELKRIEKEL-- 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1185 hQKLEEERSVLNNQLLEMKK---RESKFIKD---ADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSL 1258
Cdd:PRK03918 469 -KEIEEKERKLRKELRELEKvlkKESELIKLkelAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKE 547
|
410 420 430
....*....|....*....|....*....|....
gi 4506751 1259 HSVVQTLESDKVKLELKVKNLELQLKENKRQLSS 1292
Cdd:PRK03918 548 LEKLEELKKKLAELEKKLDELEEELAELLKELEE 581
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
345-1067 |
5.29e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 70.87 E-value: 5.29e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 345 RKISGTTALQEALKEKQQH---IEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAK----MDQLRTMV 417
Cdd:TIGR02169 217 LKEKREYEGYELLKEKEALerqKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLgeeeQLRVKEKI 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 418 EAADREKVELLNQLEEEKRKVEDLqfrveEESITKGDLETQTKLEhaRIKELEQSLLFEKTKADKLQRELEDTRVATVSE 497
Cdd:TIGR02169 297 GELEAEIASLERSIAEKERELEDA-----EERLAKLEAEIDKLLA--EIEELEREIEEERKRRDKLTEEYAELKEELEDL 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 498 KSRIMELEKDLALRVQEVAELRRRLESNKPAGDvdmslSLLQEISSLQE---KLEVTRTDHQREITSLKE---HFGAREE 571
Cdd:TIGR02169 370 RAELEEVDKEFAETRDELKDYREKLEKLKREIN-----ELKRELDRLQEelqRLSEELADLNAAIAGIEAkinELEEEKE 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 572 THQKEIKA----LYTATEKLSKENESL---KSKLEHANKENSDVialwKSKLETAIASHQQAMEELKVSFS--KGLGTET 642
Cdd:TIGR02169 445 DKALEIKKqewkLEQLAADLSKYEQELydlKEEYDRVEKELSKL----QRELAEAEAQARASEERVRGGRAveEVLKASI 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 643 AEFAELKTQIEKMRLDYQHEIE-----NLQN--QQDSERAAHA----KEMEALRA------------KLMKVIKEKE--- 696
Cdd:TIGR02169 521 QGVHGTVAQLGSVGERYATAIEvaagnRLNNvvVEDDAVAKEAiellKRRKAGRAtflplnkmrderRDLSILSEDGvig 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 697 --------------------------NSLEAIRSKLDKAE----DQHLVE---------------------MEDTLNKLQ 725
Cdd:TIGR02169 601 favdlvefdpkyepafkyvfgdtlvvEDIEAARRLMGKYRmvtlEGELFEksgamtggsraprggilfsrsEPAELQRLR 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 726 EAEIKVK-ELEVLQAKCNEQTKVIDNFTSQLKATEEKLldlDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAES 804
Cdd:TIGR02169 681 ERLEGLKrELSSLQSELRRIENRLDELSQELSDASRKI---GEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVK 757
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 805 SKASSITRELQGRELKLTNLQENLS----------------EVSQVKET---LEKELQILKEKFAEASEEAVSVQRSMQE 865
Cdd:TIGR02169 758 SELKELEARIEELEEDLHKLEEALNdlearlshsripeiqaELSKLEEEvsrIEARLREIEQKLNRLTLEKEYLEKEIQE 837
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 866 TVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEimkmsgdnssqltkMNDELRLKER 945
Cdd:TIGR02169 838 LQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDE--------------LEAQLRELER 903
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 946 DVEELQLKLTKANENASFLQKSIEdmTVKAEQSQQEAAKKHEEEKKELERKLSDLEKkmetshnQCQELKARYeRATSET 1025
Cdd:TIGR02169 904 KIEELEAQIEKKRKRLSELKAKLE--ALEEELSEIEDPKGEDEEIPEEELSLEDVQA-------ELQRVEEEI-RALEPV 973
|
810 820 830 840
....*....|....*....|....*....|....*....|..
gi 4506751 1026 KTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQ 1067
Cdd:TIGR02169 974 NMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKK 1015
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
687-1280 |
5.40e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 70.86 E-value: 5.40e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 687 KLMKVIKEKENSLEAIRSKLDKAEDQHlvemedtlNKLQEAEikvKELEvlqakcnEQTKVIDNFTSQLKATEEKLldld 766
Cdd:PRK03918 166 NLGEVIKEIKRRIERLEKFIKRTENIE--------ELIKEKE---KELE-------EVLREINEISSELPELREEL---- 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 767 alRKASSEgKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEK--ELQI 844
Cdd:PRK03918 224 --EKLEKE-VKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEyiKLSE 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 845 LKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENdIAEIMK 924
Cdd:PRK03918 301 FYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEE-LERLKK 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 925 MSGDNSsqLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQ-----------SQQEAAKKHEEEKKEL 993
Cdd:PRK03918 380 RLTGLT--PEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEElkkakgkcpvcGRELTEEHRKELLEEY 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 994 ERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEI-LQNLQKTLLDTEDKLKG-AREENSGLLQELEELRKQADKA 1071
Cdd:PRK03918 458 TAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIkLKELAEQLKELEEKLKKyNLEELEKKAEEYEKLKEKLIKL 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1072 KAAQ-TAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNEldtLKENNLKNVEELNKskelltvENQKMEEFRKEIETL 1150
Cdd:PRK03918 538 KGEIkSLKKELEKLEELKKKLAELEKKLDELEEELAELLKE---LEELGFESVEELEE-------RLKELEPFYNEYLEL 607
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1151 KQAaaqkSQQLSALQEENVKLAEELGRSRDEVtshQKLEEERSVLNNQLLEMKKresKFIKDADEEKASLQKSISITSAL 1230
Cdd:PRK03918 608 KDA----EKELEREEKELKKLEEELDKAFEEL---AETEKRLEELRKELEELEK---KYSEEEYEELREEYLELSRELAG 677
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 4506751 1231 LTEKDAELEKLRNEVTvlrgenASAKSLHSVVQTLESDKVKLELKVKNLE 1280
Cdd:PRK03918 678 LRAELEELEKRREEIK------KTLEKLKEELEEREKAKKELEKLEKALE 721
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
352-980 |
6.24e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 70.45 E-value: 6.24e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 352 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELalardghdQHVLELEAKMDQLRTMVEAADREKVELLNQL 431
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERR--------EELETLEAEIEDLRETIAETEREREELAEEV 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 432 EEEKRKVEDLQFRVEeesitkgDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRV---ATVSEKSRIMELEKDL 508
Cdd:PRK02224 282 RDLRERLEELEEERD-------DLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVaaqAHNEEAESLREDADDL 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 509 ALRVQEVAELRRRLESNkpagdvdmslslLQEISSLQEKLEVTRTDHQREITSLKEHFGAREEthqkeikalytATEKLS 588
Cdd:PRK02224 355 EERAEELREEAAELESE------------LEEAREAVEDRREEIEELEEEIEELRERFGDAPV-----------DLGNAE 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 589 KENESLKSKLEHANKENSDVIALWKSkLETAIASHQQAMEELKVSfskglgtetaefaelktqiekmrldyqheiENLQN 668
Cdd:PRK02224 412 DFLEELREERDELREREAELEATLRT-ARERVEEAEALLEAGKCP------------------------------ECGQP 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 669 QQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDqhLVEMEDTLNKLQEAEIKVKELevlqakcneqtkvi 748
Cdd:PRK02224 461 VEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAED--LVEAEDRIERLEERREDLEEL-------------- 524
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 749 dnFTSQLKATEEKLLDLDALRKASSEGKSEMkklRQQLEAAEKQikHLEIEKNAESSKASSITR-ELQGRELKLTNLQEN 827
Cdd:PRK02224 525 --IAERRETIEEKRERAEELRERAAELEAEA---EEKREAAAEA--EEEAEEAREEVAELNSKLaELKERIESLERIRTL 597
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 828 LSEVSQVKETLEkELQILKEKFAEASEEAVSVQRSMQETVNKLHQK--EEQFNMLSSDLEKLRENLADMEAKFREKDERE 905
Cdd:PRK02224 598 LAAIADAEDEIE-RLREKREALAELNDERRERLAEKRERKRELEAEfdEARIEEAREDKERAEEYLEQVEEKLDELREER 676
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 4506751 906 EQLIKAKEKLENDIAEImkmsgdnssqltkmnDELRLKERDVEELQLKLTKANENASFLQKSIedMTVKAEQSQQ 980
Cdd:PRK02224 677 DDLQAEIGAVENELEEL---------------EELRERREALENRVEALEALYDEAEELESMY--GDLRAELRQR 734
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
60-121 |
1.28e-11 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 69.33 E-value: 1.28e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 4506751 60 VGERVWVNGNKpGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRP 121
Cdd:COG5244 6 VNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIFIRP 66
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
571-1290 |
2.12e-11 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 68.59 E-value: 2.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 571 ETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIA------LWKSKLETAIAS----------HQQAMEELKVSF 634
Cdd:pfam05483 109 QENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKennatrHLCNLLKETCARsaektkkyeyEREETRQVYMDL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 635 SKGLGTETAEFAELKTQIEKMRLDYQHEIenlqnQQDSERAAHAKEmealraKLMKVIKEKENSLEAIRSKLDKAEDQhl 714
Cdd:pfam05483 189 NNNIEKMILAFEELRVQAENARLEMHFKL-----KEDHEKIQHLEE------EYKKEINDKEKQVSLLLIQITEKENK-- 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 715 veMEDTLNKLQEAEIKVKELEvlqakcnEQTKVIDNFTSQLKATEEKLL-DLDALRKASSEGKSEMKKLRQQLEAAEKQI 793
Cdd:pfam05483 256 --MKDLTFLLEESRDKANQLE-------EKTKLQDENLKELIEKKDHLTkELEDIKMSLQRSMSTQKALEEDLQIATKTI 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 794 KHLEIEKNA--ESSKASSITRELQGRELKLT--NLQENLSEVSQVKETLEKELQILKEKFAEASEEAvsvqrsmqETVNK 869
Cdd:pfam05483 327 CQLTEEKEAqmEELNKAKAAHSFVVTEFEATtcSLEELLRTEQQRLEKNEDQLKIITMELQKKSSEL--------EEMTK 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 870 LHQKEEqfnmlsSDLEKLRENLADMEAKFREKdereEQLIKAKEKLENDIAEIMKMsgdnssqltkmndeLRLKERDVEE 949
Cdd:pfam05483 399 FKNNKE------VELEELKKILAEDEKLLDEK----KQFEKIAEELKGKEQELIFL--------------LQAREKEIHD 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 950 LQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKlsdlEKKMETSHNQCQELKARYERATSETKTKH 1029
Cdd:pfam05483 455 LEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLEN----KELTQEASDMTLELKKHQEDIINCKKQEE 530
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1030 EEI--LQNLQKTLLDTEDKLKGAREEnsgLLQELEELRKQADKAKaaqtaEDAMQIMEQMTKEKTetlasledtkqtnak 1107
Cdd:pfam05483 531 RMLkqIENLEEKEMNLRDELESVREE---FIQKGDEVKCKLDKSE-----ENARSIEYEVLKKEK--------------- 587
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1108 lQNELDTLKENNLKNVEElNKSKELltvenqkmEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRdevtshQK 1187
Cdd:pfam05483 588 -QMKILENKCNNLKKQIE-NKNKNI--------EELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAK------QK 651
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1188 LEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSAL-------LTEKDAELEKLRNEVTVLRGENASAKSLH- 1259
Cdd:pfam05483 652 FEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIdkrcqhkIAEMVALMEKHKHQYDKIIEERDSELGLYk 731
|
730 740 750
....*....|....*....|....*....|.
gi 4506751 1260 SVVQTLESDKVKLELKVKNLELQLKENKRQL 1290
Cdd:pfam05483 732 NKEQEQSSAKAALEIELSNIKAELLSLKKQL 762
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
567-1150 |
2.64e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 68.53 E-value: 2.64e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 567 GAREETHQKEIKALYTATEKLSKENESLKSKLEHANkENSDVIALWKSKLETAIASHQQAMEELkvsfskglgtetaefA 646
Cdd:PRK02224 191 QLKAQIEEKEEKDLHERLNGLESELAELDEEIERYE-EQREQARETRDEADEVLEEHEERREEL---------------E 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 647 ELKTQIEKMRLDYQheienlqnQQDSERAAHAKEMEALRAKLMKVIKEKENSLEaiRSKLDKAEDQHLVEMEDTLNklqe 726
Cdd:PRK02224 255 TLEAEIEDLRETIA--------ETEREREELAEEVRDLRERLEELEEERDDLLA--EAGLDDADAEAVEARREELE---- 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 727 aeikvKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDA----LRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNA 802
Cdd:PRK02224 321 -----DRDEELRDRLEECRVAAQAHNEEAESLREDADDLEEraeeLREEAAELESELEEAREAVEDRREEIEELEEEIEE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 803 ESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASE--EAVSVQRSMQET-----VNKLHQKEE 875
Cdd:PRK02224 396 LRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAllEAGKCPECGQPVegsphVETIEEDRE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 876 QFNMLSSDLEKLRENLADMEAKFrekdEREEQLIKAKEKLENdiaeimkmSGDNSSQLTKMNDElrlKERDVEELQLKLT 955
Cdd:PRK02224 476 RVEELEAELEDLEEEVEEVEERL----ERAEDLVEAEDRIER--------LEERREDLEELIAE---RRETIEEKRERAE 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 956 KANENASFLQKSIEDMTVKAeQSQQEAAKKHEEEKKELERKLSDLEKKMEtSHNQCQELKARYERATSETKTKHEEiLQN 1035
Cdd:PRK02224 541 ELRERAAELEAEAEEKREAA-AEAEEEAEEAREEVAELNSKLAELKERIE-SLERIRTLLAAIADAEDEIERLREK-REA 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1036 LQKTLLDTEDKLKGAREENSGLLQELEELR---KQADKAKAAQTAEDAMQIMEQMTKEKTEtlasledtkqtnakLQNEL 1112
Cdd:PRK02224 618 LAELNDERRERLAEKRERKRELEAEFDEARieeAREDKERAEEYLEQVEEKLDELREERDD--------------LQAEI 683
|
570 580 590
....*....|....*....|....*....|....*...
gi 4506751 1113 DTLkENNLKNVEELNKSKELLTVENQKMEEFRKEIETL 1150
Cdd:PRK02224 684 GAV-ENELEELEELRERREALENRVEALEALYDEAEEL 720
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
481-1091 |
9.14e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 66.63 E-value: 9.14e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 481 DKLQRELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLEsnKPAGDVDMSLSLLQEISSLQEKLEvtrtDHQREIT 560
Cdd:PRK03918 175 KRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELP--ELREELEKLEKEVKELEELKEEIE----ELEKELE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 561 SLKEHFGAREEthqkEIKALYTATEKLSKENESLKSKLEHANKensdvialwkskletaiashqqaMEELKVSFSKgLGT 640
Cdd:PRK03918 249 SLEGSKRKLEE----KIRELEERIEELKKEIEELEEKVKELKE-----------------------LKEKAEEYIK-LSE 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 641 ETAEFAELKTQIEKMRLDYQHEIENLQnqqdseraahakemealraKLMKVIKEKENSLEAIRSKLDKAEDQhLVEMEDT 720
Cdd:PRK03918 301 FYEEYLDELREIEKRLSRLEEEINGIE-------------------ERIKELEEKEERLEELKKKLKELEKR-LEELEER 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 721 LNKLQEAEIKVKELEVLQAKCNEQTKvidnftsqlkatEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKhlEIEK 800
Cdd:PRK03918 361 HELYEEAKAKKEELERLKKRLTGLTP------------EKLEKELEELEKAKEEIEEEISKITARIGELKKEIK--ELKK 426
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 801 NAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQ--RSMQETVNKLHQKEEQFN 878
Cdd:PRK03918 427 AIEELKKAKGKCPVCGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEkvLKKESELIKLKELAEQLK 506
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 879 MLSSDLEKLreNLADMEAKFREKDEREEQLIKAK-------------EKLENDIAEIMKMSGDNSSQLTKMNDELR-LKE 944
Cdd:PRK03918 507 ELEEKLKKY--NLEELEKKAEEYEKLKEKLIKLKgeikslkkeleklEELKKKLAELEKKLDELEEELAELLKELEeLGF 584
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 945 RDVEELQLKLtkaNENASFLQKSIEDMTVKAE-QSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARY----- 1018
Cdd:PRK03918 585 ESVEELEERL---KELEPFYNEYLELKDAEKElEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYseeey 661
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1019 ERATSETKTKHEEI---------LQNLQKTLLDTEDKLKGAREENSG----------LLQELEELRKQADKAKA------ 1073
Cdd:PRK03918 662 EELREEYLELSRELaglraeleeLEKRREEIKKTLEKLKEELEEREKakkeleklekALERVEELREKVKKYKAllkera 741
|
650
....*....|....*....
gi 4506751 1074 -AQTAEDAMQIMEQMTKEK 1091
Cdd:PRK03918 742 lSKVGEIASEIFEELTEGK 760
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
405-1287 |
1.82e-10 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 65.84 E-value: 1.82e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 405 ELEAKMDQLRTMVEAADREKVELlNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQ 484
Cdd:TIGR00606 225 QITSKEAQLESSREIVKSYENEL-DPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQL 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 485 RELEDTRVATVSEKSR-IMELEKDLALRVQEVAELRRRlesnkpagdvdmSLSLLQEISSLQEKLEVTRtDHQREITSLK 563
Cdd:TIGR00606 304 NDLYHNHQRTVREKEReLVDCQRELEKLNKERRLLNQE------------KTELLVEQGRLQLQADRHQ-EHIRARDSLI 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 564 EHFGAREETHQKEIKALytATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAiashQQAMEELKVSFSKGLGTETA 643
Cdd:TIGR00606 371 QSLATRLELDGFERGPF--SERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLK----QEQADEIRDEKKGLGRTIEL 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 644 EFAELKTQIEKMRldyqHEIENLQNQQDSeraahakemealraklMKVIKEKENSLEAIRSKLDKAEDQHLVEMEdtlnK 723
Cdd:TIGR00606 445 KKEILEKKQEELK----FVIKELQQLEGS----------------SDRILELDQELRKAERELSKAEKNSLTETL----K 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 724 LQEAEIKVKELEVLQAKCNEQTKV--IDNFTSQLKATE----EKLLDLDALRKASSEGKSEM-----------------K 780
Cdd:TIGR00606 501 KEVKSLQNEKADLDRKLRKLDQEMeqLNHHTTTRTQMEmltkDKMDKDEQIRKIKSRHSDELtsllgyfpnkkqledwlH 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 781 KLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQvKETLEKELQILKEKFAEAS------- 853
Cdd:TIGR00606 581 SKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCG-SQDEESDLERLKEEIEKSSkqramla 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 854 ----------EEAVSVQRSMQETVNKLHQKEEQFNMLSSDLE-KLR---ENLADMEAKFREKDEREEQLIKAKEKLENDI 919
Cdd:TIGR00606 660 gatavysqfiTQLTDENQSCCPVCQRVFQTEAELQEFISDLQsKLRlapDKLKSTESELKKKEKRRDEMLGLAPGRQSII 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 920 AEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSD 999
Cdd:TIGR00606 740 DLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSD 819
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1000 LEKKMETSHNQCQELKARYERATSETKtKHEEILQNLQKTLLDTEDKLKgarEENSGLLQELEELRKQADKAKAAQTAED 1079
Cdd:TIGR00606 820 LDRTVQQVNQEKQEKQHELDTVVSKIE-LNRKLIQDQQEQIQHLKSKTN---ELKSEKLQIGTNLQRRQQFEEQLVELST 895
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1080 AMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVE-ELNKSKELLTVENQKMEEFRKEIETLKQAAAQKS 1158
Cdd:TIGR00606 896 EVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQdKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQK 975
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1159 Q--------QLSALQEENVKLAEELGRSRDEVTSHQKLEeerSVLNNQLLEMKKRESkfIKDADEEKASLQKSISitSAL 1230
Cdd:TIGR00606 976 EtelntvnaQLEECEKHQEKINEDMRLMRQDIDTQKIQE---RWLQDNLTLRKRENE--LKEVEEELKQHLKEMG--QMQ 1048
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*..
gi 4506751 1231 LTEKDAELEKLRNEVTVLRGENASAkslHSVVQTLESDKVKLELKVKNLELQLKENK 1287
Cdd:TIGR00606 1049 VLQMKQEHQKLEENIDLIKRNHVLA---LGRQKGYEKEIKHFKKELREPQFRDAEEK 1102
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
574-1370 |
2.25e-10 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 65.84 E-value: 2.25e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 574 QKEIKALYTATEKLSKEN---ESLKSKLEHANKENSDVIALWKS--KLETAIASHQQAMEEL-KVS---FSKGLGTETAE 644
Cdd:TIGR01612 578 EKEIKDLFDKYLEIDDEIiyiNKLKLELKEKIKNISDKNEYIKKaiDLKKIIENNNAYIDELaKISpyqVPEHLKNKDKI 657
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 645 FAELKTQIEKMrldYQHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKL 724
Cdd:TIGR01612 658 YSTIKSELSKI---YEDDIDALYNELSSIVKENAIDNTEDKAKLDDLKSKIDKEYDKIQNMETATVELHLSNIENKKNEL 734
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 725 QEAEIKVKElEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQL--EAAEKQIKHLEIEKNA 802
Cdd:TIGR01612 735 LDIIVEIKK-HIHGEINKDLNKILEDFKNKEKELSNKINDYAKEKDELNKYKSKISEIKNHYndQINIDNIKDEDAKQNY 813
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 803 ESSKASSITRELQGREL-KLTNlqenlsevsqvketlekELQILKEKFAEASEEAVSVQRSMQETVNKLHqkeEQFNMLS 881
Cdd:TIGR01612 814 DKSKEYIKTISIKEDEIfKIIN-----------------EMKFMKDDFLNKVDKFINFENNCKEKIDSEH---EQFAELT 873
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 882 SDL--EKLRENLADMEAKFREKdereeqlikakEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANE 959
Cdd:TIGR01612 874 NKIkaEISDDKLNDYEKKFNDS-----------KSLINEINKSIEEEYQNINTLKKVDEYIKICENTKESIEKFHNKQNI 942
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 960 NASFLQKSIEdmTVKAEQSQQEaakkheeekkelerklSDLEKKMETSHNQCQEL-KARYERATSETKTKHEEILQ---N 1035
Cdd:TIGR01612 943 LKEILNKNID--TIKESNLIEK----------------SYKDKFDNTLIDKINELdKAFKDASLNDYEAKNNELIKyfnD 1004
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1036 LQKTL-LDTEDKLKGAREENSGLLQELEElrKQADKAKAAQTAEDAM-----QIMEQMTKEKTETLASLE-------DTK 1102
Cdd:TIGR01612 1005 LKANLgKNKENMLYHQFDEKEKATNDIEQ--KIEDANKNIPNIEIAIhtsiyNIIDEIEKEIGKNIELLNkeileeaEIN 1082
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1103 QTN-------AKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAeel 1175
Cdd:TIGR01612 1083 ITNfneikekLKHYNFDDFGKEENIKYADEINKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLEDVA--- 1159
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1176 grsrdevtshqkleeERSVLNNQLLEMKKRESKFIKDADEEKASLQksisitsalltekdaELEKLRNEVTvlrgenasa 1255
Cdd:TIGR01612 1160 ---------------DKAISNDDPEEIEKKIENIVTKIDKKKNIYD---------------EIKKLLNEIA--------- 1200
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1256 kslhsvvqTLESDKVKLElKVKNLELQLKENKRQLSSSsgntdtQADEDERAQESQIDFLNSVIVDLQR-KNQDLKMKVE 1334
Cdd:TIGR01612 1201 --------EIEKDKTSLE-EVKGINLSYGKNLGKLFLE------KIDEEKKKSEHMIKAMEAYIEDLDEiKEKSPEIENE 1265
|
810 820 830
....*....|....*....|....*....|....*...
gi 4506751 1335 MMSEAALNGNGDDLNNYDSDDQEKQ--SKKKPRLFCDI 1370
Cdd:TIGR01612 1266 MGIEMDIKAEMETFNISHDDDKDHHiiSKKHDENISDI 1303
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
429-1147 |
7.83e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 63.50 E-value: 7.83e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 429 NQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEkdl 508
Cdd:TIGR04523 47 NELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLE--- 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 509 alrvQEVAELRRRLESNKPAGDVDmslslLQEISSLQEKLEVTRTDHQREItslkehfgarEETHQKEIKALYTATEKLS 588
Cdd:TIGR04523 124 ----VELNKLEKQKKENKKNIDKF-----LTEIKKKEKELEKLNNKYNDLK----------KQKEELENELNLLEKEKLN 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 589 KENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMrldyQHEIENLQN 668
Cdd:TIGR04523 185 IQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNT----QTQLNQLKD 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 669 QQDSE-RAAHAKEMEALRAKlmKVIKEKENSLEAIRSKLDKAEDQhlvEMEDTLNKLQ-EAEIKVKELEVLQAKCNEQTK 746
Cdd:TIGR04523 261 EQNKIkKQLSEKQKELEQNN--KKIKELEKQLNQLKSEISDLNNQ---KEQDWNKELKsELKNQEKKLEEIQNQISQNNK 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 747 VIDNFTSQLKATEEKLLDLDA----LRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLT 822
Cdd:TIGR04523 336 IISQLNEQISQLKKELTNSESenseKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIK 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 823 NLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKD 902
Cdd:TIGR04523 416 KLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKE 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 903 EREEQLIKAKEKLEN-------DIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKAN--ENASFLQKSIEDM-- 971
Cdd:TIGR04523 496 KELKKLNEEKKELEEkvkdltkKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENleKEIDEKNKEIEELkq 575
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 972 ---TVKAEQSQ-QEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSEtKTKHEEILQNLQKTLLDTEDKL 1047
Cdd:TIGR04523 576 tqkSLKKKQEEkQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSI-IKNIKSKKNKLKQEVKQIKETI 654
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1048 KGAREENSGLLQELEELRKQADkakaaqtaeDAMQIMEQMTKEKTETlaslEDTKQTNAKLQNELDTLKENNLKNVEELN 1127
Cdd:TIGR04523 655 KEIRNKWPEIIKKIKESKTKID---------DIIELMKDWLKELSLH----YKKYITRMIRIKDLPKLEEKYKEIEKELK 721
|
730 740
....*....|....*....|
gi 4506751 1128 KSKELLTVENQKMEEFRKEI 1147
Cdd:TIGR04523 722 KLDEFSKELENIIKNFNKKF 741
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
671-1338 |
8.69e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.55 E-value: 8.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 671 DSERAAHAKEMEALRAKLMK---VIKEKENSLEAIRSKLDKAEdqhlvEMEDTLNKLQEAEIKVKELEVLQAKcneqtKV 747
Cdd:TIGR02169 169 DRKKEKALEELEEVEENIERldlIIDEKRQQLERLRREREKAE-----RYQALLKEKREYEGYELLKEKEALE-----RQ 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 748 IDNFTSQLKATEEKLLDLDALRkasSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAEsskassITRELQGRELKLTNLQEN 827
Cdd:TIGR02169 239 KEAIERQLASLEEELEKLTEEI---SELEKRLEEIEQLLEELNKKIKDLGEEEQLR------VKEKIGELEAEIASLERS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 828 LSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQ 907
Cdd:TIGR02169 310 IAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKD 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 908 LIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQeAAKKHE 987
Cdd:TIGR02169 390 YREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAA-DLSKYE 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 988 EEKKELERKLSDLEKKMETSHNQCQELKA---------RYERATSETKTK-----HEEILQ------------------N 1035
Cdd:TIGR02169 469 QELYDLKEEYDRVEKELSKLQRELAEAEAqaraseervRGGRAVEEVLKAsiqgvHGTVAQlgsvgeryataievaagnR 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1036 LQKTLLDTEDKLKGA----REENSG---------------------------------------------------LLQE 1060
Cdd:TIGR02169 549 LNNVVVEDDAVAKEAiellKRRKAGratflplnkmrderrdlsilsedgvigfavdlvefdpkyepafkyvfgdtlVVED 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1061 LEELRKQADKAKAAQTAEDAMQIMEQMT----------KEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSK 1130
Cdd:TIGR02169 629 IEAARRLMGKYRMVTLEGELFEKSGAMTggsraprggiLFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELS 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1131 ELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQK----LEEERSVLNNQLLEMKKRE 1206
Cdd:TIGR02169 709 QELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEArieeLEEDLHKLEEALNDLEARL 788
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1207 S-KFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASA-----------KSLHSVVQTLESDKVKLEL 1274
Cdd:TIGR02169 789 ShSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELqeqridlkeqiKSIEKEIENLNGKKEELEE 868
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 4506751 1275 KVKNLELQLKENKRQLSSSSGNTDtQADEDERAQESQIDFLNSVIVDLQRKNQDLKMKVEMMSE 1338
Cdd:TIGR02169 869 ELEELEAALRDLESRLGDLKKERD-ELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEE 931
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
341-851 |
1.68e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 62.77 E-value: 1.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 341 SRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELaLARDGHDQHVLELEAKMDQLRTMVEAA 420
Cdd:PRK03918 179 ERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEV-KELEELKEEIEELEKELESLEGSKRKL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 421 DREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKAD------KLQRELEDTRvat 494
Cdd:PRK03918 258 EEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRleeeinGIEERIKELE--- 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 495 vSEKSRIMELEKdlalrvqEVAELRRRLESNKPagdvdmSLSLLQEISSLQEKLEvtrtdhqreitSLKEHFGARE-ETH 573
Cdd:PRK03918 335 -EKEERLEELKK-------KLKELEKRLEELEE------RHELYEEAKAKKEELE-----------RLKKRLTGLTpEKL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 574 QKEIKALYTATEKLSKENESLKSKLEHANKENSD----VIALWKSKLETAIASH---QQAMEELKVSFSKGLGTETAEFA 646
Cdd:PRK03918 390 EKELEELEKAKEEIEEEISKITARIGELKKEIKElkkaIEELKKAKGKCPVCGReltEEHRKELLEEYTAELKRIEKELK 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 647 ELKTQIEKMR----------------------LDYQHEIENLQNQQDSERA-AHAKEMEALRAKLMKV------------ 691
Cdd:PRK03918 470 EIEEKERKLRkelrelekvlkkeseliklkelAEQLKELEEKLKKYNLEELeKKAEEYEKLKEKLIKLkgeikslkkele 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 692 -IKEKENSLEAIRSKLDKAEDQhLVEMEDTLNKL-----QEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDL 765
Cdd:PRK03918 550 kLEELKKKLAELEKKLDELEEE-LAELLKELEELgfesvEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEEL 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 766 DALRKASSEGKSEMKKLRQQLEAAEKQI----------KHLEIEKNAESSKASSITRELQGRELK--LTNLQENLSEVSQ 833
Cdd:PRK03918 629 DKAFEELAETEKRLEELRKELEELEKKYseeeyeelreEYLELSRELAGLRAELEELEKRREEIKktLEKLKEELEEREK 708
|
570 580
....*....|....*....|....
gi 4506751 834 VKETLEK------ELQILKEKFAE 851
Cdd:PRK03918 709 AKKELEKlekaleRVEELREKVKK 732
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
345-1148 |
2.49e-09 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 62.05 E-value: 2.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 345 RKISGTTALQEALKEKQQHIEQLLAERDLERAE-VAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADRE 423
Cdd:pfam05483 42 QKLNFLPMLEQVANSGDCHYQEGLKDSDFENSEgLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKA 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 424 KVELlnQLEEEKrkvedLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVAtvseksrIME 503
Cdd:pfam05483 122 IQEL--QFENEK-----VSLKLEEEIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQV-------YMD 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 504 LEKDLALRVQEVAELRRRLESNKpagdVDMSLSLLQE---ISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKAL 580
Cdd:pfam05483 188 LNNNIEKMILAFEELRVQAENAR----LEMHFKLKEDhekIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLL 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 581 YTATEKLSKENESLKSKLEHANKENSDVIALWKSkletaiashqqaMEELKVSFSKGLGTETAEFAELKTQIEKMrldyq 660
Cdd:pfam05483 264 EESRDKANQLEEKTKLQDENLKELIEKKDHLTKE------------LEDIKMSLQRSMSTQKALEEDLQIATKTI----- 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 661 heienlqNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLdKAEDQHLVEMEDTLNKL-QEAEIKVKELEVLQA 739
Cdd:pfam05483 327 -------CQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELL-RTEQQRLEKNEDQLKIItMELQKKSSELEEMTK 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 740 KCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAE-------SSKASSITR 812
Cdd:pfam05483 399 FKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIktseehyLKEVEDLKT 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 813 ELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLA 892
Cdd:pfam05483 479 ELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFI 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 893 DMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKmndELRLKERDVEELQLKLTKANENASFLQKSIEDMT 972
Cdd:pfam05483 559 QKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKK---QIENKNKNIEELHQENKALKKKGSAENKQLNAYE 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 973 VKAEQsqqeaakkheeekkelerklsdLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKgare 1052
Cdd:pfam05483 636 IKVNK----------------------LELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVK---- 689
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1053 ensglLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTlKENNLKNveELNKSKEL 1132
Cdd:pfam05483 690 -----LQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEI-ELSNIKA--ELLSLKKQ 761
|
810
....*....|....*.
gi 4506751 1133 LTVENQKMEEFRKEIE 1148
Cdd:pfam05483 762 LEIEKEEKEKLKMEAK 777
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1046-1340 |
2.93e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.88 E-value: 2.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1046 KLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEE 1125
Cdd:COG1196 217 ELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1126 LNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVtshQKLEEERSVLNNQLLEMKKR 1205
Cdd:COG1196 297 LARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEEL---EEAEAELAEAEEALLEAEAE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1206 ESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQLKE 1285
Cdd:COG1196 374 LAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAE 453
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 4506751 1286 NKRQLSSSSGNTDTQADEDERAQESQIDFLNSVIVDLQRKNQDLKMKVEMMSEAA 1340
Cdd:COG1196 454 LEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLE 508
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
806-1334 |
3.88e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 61.19 E-value: 3.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 806 KASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKfaeaseeavsvqrsMQETVNKLHQKEEQFNMLSSDLE 885
Cdd:TIGR04523 41 KLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQ--------------IKDLNDKLKKNKDKINKLNSDLS 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 886 KLRENLAD----MEAKFREKDEREEQLIKAKEKLENDIAEIMKMSgdnsSQLTKMNDELRLKERDVEELQLKLTKANENA 961
Cdd:TIGR04523 107 KINSEIKNdkeqKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKE----KELEKLNNKYNDLKKQKEELENELNLLEKEK 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 962 SFLQKSIEDMtvkaeQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKaryeratsETKTKHEEILQNLQKTLL 1041
Cdd:TIGR04523 183 LNIQKNIDKI-----KNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLK--------DNIEKKQQEINEKTTEIS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1042 DTEDKLKGAREENSGLLQELEELRKQADKAKaaqtaedamQIMEQMTKEKTETLASLEDTKqtNAKLQNELDTLKENNLK 1121
Cdd:TIGR04523 250 NTQTQLNQLKDEQNKIKKQLSEKQKELEQNN---------KKIKELEKQLNQLKSEISDLN--NQKEQDWNKELKSELKN 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1122 NVEELNKSKELLTVENQKMEEFRKEIETLKQaaaqksqQLSALQEENVKLAEELGRSRDEV-----------TSHQKLEE 1190
Cdd:TIGR04523 319 QEKKLEEIQNQISQNNKIISQLNEQISQLKK-------ELTNSESENSEKQRELEEKQNEIeklkkenqsykQEIKNLES 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1191 ERSVLNNQLLEMKKRESKF---IKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLrgeNASAKSLHSVVQTLES 1267
Cdd:TIGR04523 392 QINDLESKIQNQEKLNQQKdeqIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVK---ELIIKNLDNTRESLET 468
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 4506751 1268 DKVKLELKVKNLELQLKENKRQLSSssgntdtqadederaQESQIDFLNSVIVDLQRKNQDLKMKVE 1334
Cdd:TIGR04523 469 QLKVLSRSINKIKQNLEQKQKELKS---------------KEKELKKLNEEKKELEEKVKDLTKKIS 520
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
456-1074 |
7.43e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.72 E-value: 7.43e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 456 ETQTKLEHAR---------IKELEQSLlfEK--------TKADKLQRELEDTRVATVSekSRIMELEKDLALRVQEVAEL 518
Cdd:COG1196 176 EAERKLEATEenlerlediLGELERQL--EPlerqaekaERYRELKEELKELEAELLL--LKLRELEAELEELEAELEEL 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 519 RRRLESnkpagdvdmslsLLQEISSLQEKLEVTRTDHQREITSLKEHfGAREETHQKEIKALYTATEKLSKENESLKSKL 598
Cdd:COG1196 252 EAELEE------------LEAELAELEAELEELRLELEELELELEEA-QAEEYELLAELARLEQDIARLEERRRELEERL 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 599 EHANKEnsdvIALWKSKLETAIASHQQAMEELKvsfskglgTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHA 678
Cdd:COG1196 319 EELEEE----LAELEEELEELEEELEELEEELE--------EAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAE 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 679 KEMEALRAKLmkVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEvlqakcNEQTKVIDNFTSQLKAT 758
Cdd:COG1196 387 ELLEALRAAA--ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEE------EALEEAAEEEAELEEEE 458
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 759 EEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITR--ELQGRELKLTNLQENLSEVSQVKE 836
Cdd:COG1196 459 EALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAalLLAGLRGLAGAVAVLIGVEAAYEA 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 837 TLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLE 916
Cdd:COG1196 539 ALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVL 618
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 917 NDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERK 996
Cdd:COG1196 619 GDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEA 698
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 4506751 997 LSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKgAREENSGLLQELEELRKQADKAKAA 1074
Cdd:COG1196 699 LLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEE-EALEELPEPPDLEELERELERLERE 775
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
736-962 |
1.26e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 58.62 E-value: 1.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 736 VLQAKCNEQTKVIDNFTSQLKATEEKlldLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEieknaesskassitRELQ 815
Cdd:COG4942 10 LLALAAAAQADAAAEAEAELEQLQQE---IAELEKELAALKKEEKALLKQLAALERRIAALA--------------RRIR 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 816 GRELKLTNLQENLSEVSQVKETLEKELQILKEKFAE------------------ASEEAVSVQRSMQETVNKLHQKEEQF 877
Cdd:COG4942 73 ALEQELAALEAELAELEKEIAELRAELEAQKEELAEllralyrlgrqpplalllSPEDFLDAVRRLQYLKYLAPARREQA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 878 NMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKA 957
Cdd:COG4942 153 EELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
....*
gi 4506751 958 NENAS 962
Cdd:COG4942 233 EAEAA 237
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
364-1333 |
1.51e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 59.75 E-value: 1.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 364 IEQLLAERDlerAEVAKATSHVGEIEQEL-ALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQ 442
Cdd:pfam15921 222 ISKILRELD---TEISYLKGRIFPVEDQLeALKSESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQ 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 443 FRVEeesITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDtrvatvseksRIMELEKDLALRVQEVAELRRRL 522
Cdd:pfam15921 299 SQLE---IIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYED----------KIEELEKQLVLANSELTEARTER 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 523 ESnkpagdvdmslsLLQEISSLQEKLEVTRTD-HQREitslkehfgaREETHQKEI-KALYTATEKLSKENESLKSKLEH 600
Cdd:pfam15921 366 DQ------------FSQESGNLDDQLQKLLADlHKRE----------KELSLEKEQnKRLWDRDTGNSITIDHLRRELDD 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 601 ANKENSDVIALWKskletAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAhake 680
Cdd:pfam15921 424 RNMEVQRLEALLK-----AMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESS---- 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 681 mEALRAKLMKVIKEKENSLEAIRSKLDK---------AEDQHLVEMEDTLNKLQeaeikvKELEVLQAKCNEQTKVIDNF 751
Cdd:pfam15921 495 -ERTVSDLTASLQEKERAIEATNAEITKlrsrvdlklQELQHLKNEGDHLRNVQ------TECEALKLQMAEKDKVIEIL 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 752 TSQLKATEE-----------KLLDLDALRKASSEGKSEMKKLR-------QQLEAAEKQIKHLEIEK----NAESSKASS 809
Cdd:pfam15921 568 RQQIENMTQlvgqhgrtagaMQVEKAQLEKEINDRRLELQEFKilkdkkdAKIRELEARVSDLELEKvklvNAGSERLRA 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 810 ITRELQGRELKLTNLQENLSEVSQVKEtlekELQILKEKFAEASEEavsvqrsMQETVNKLHQkeeQFNMLSSDLEKLRE 889
Cdd:pfam15921 648 VKDIKQERDQLLNEVKTSRNELNSLSE----DYEVLKRNFRNKSEE-------METTTNKLKM---QLKSAQSELEQTRN 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 890 NLADMEAKfrekdereeqlikakeklendIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQK--- 966
Cdd:pfam15921 714 TLKSMEGS---------------------DGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEekn 772
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 967 --SIEDMTVKAEQSQQE-AAKKHEEEKKELERKLSDLEKKMETSHNQ---CQELKARYERATSETKTKHEEILQNLQKTL 1040
Cdd:pfam15921 773 klSQELSTVATEKNKMAgELEVLRSQERRLKEKVANMEVALDKASLQfaeCQDIIQRQEQESVRLKLQHTLDVKELQGPG 852
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1041 LDTEDKLKgareenSGLLQELEELRKQADKAKAAQTAEdamQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNL 1120
Cdd:pfam15921 853 YTSNSSMK------PRLLQPASFTRTHSNVPSSQSTAS---FLSHHSRKTNALKEDPTRDLKQLLQELRSVINEEPTVQL 923
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1121 KNVEELNKSKELLTVENQkmeeFRKEIETLKQAAAQKSQQLSALQEENVKLAEELgrSRDEVTSHQKLEEERSvlnnQLL 1200
Cdd:pfam15921 924 SKAEDKGRAPSLGALDDR----VRDCIIESSLRSDICHSSSNSLQTEGSKSSETC--SREPVLLHAGELEDPS----SCF 993
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1201 EMKKRESKFIKDADEEKASLQKSISITSALLTEkdaelekLRNEVTVLRGENASAKSLHSvvqtleSDKVKlelkvknle 1280
Cdd:pfam15921 994 TFPSTASPSVKNSASRSFHSSPKKSPVHSLLTS-------SAEGSIGSSSQYRSAKTIHS------PDSVK--------- 1051
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|...
gi 4506751 1281 lqlkENKRQLSSSSGNTDtqadedeRAQESQIDFLNSVIVDLQRKNQDLKMKV 1333
Cdd:pfam15921 1052 ----DSQSLPIETTGKTC-------RKLQNRLESLQTLVEDLQLKNQAMSSMI 1093
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
699-1244 |
2.08e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.16 E-value: 2.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 699 LEAIRSKLDKAEDQ--HLVEMEDTLNKLQEAEIKVKELEVLQAKcneqtkvIDNFTSQLKateeklldLDALRKASSEGK 776
Cdd:COG4913 237 LERAHEALEDAREQieLLEPIRELAERYAAARERLAELEYLRAA-------LRLWFAQRR--------LELLEAELEELR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 777 SEMKKLRQQLEAAEKQIKHLEIEK-NAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEE 855
Cdd:COG4913 302 AELARLEAELERLEARLDALREELdELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEE 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 856 AVSVQRSMQETVNKLHQKEEQfnmlssdlekLRENLADMEAKFREKDEREEQLikakeklENDIAEIMKMSGDNSSQLTK 935
Cdd:COG4913 382 FAALRAEAAALLEALEEELEA----------LEEALAEAEAALRDLRRELREL-------EAEIASLERRKSNIPARLLA 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 936 M----NDELRLKERDV----EELQLKltkaNENASFlQKSIE--------DMTVKAEQSQQ----------------EAA 983
Cdd:COG4913 445 LrdalAEALGLDEAELpfvgELIEVR----PEEERW-RGAIErvlggfalTLLVPPEHYAAalrwvnrlhlrgrlvyERV 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 984 KKHEEEKKELERKLSDLEKKMETSHNQCQE-LKARYERATSETKTKHEEILQNLQKTL---------------------- 1040
Cdd:COG4913 520 RTGLPDPERPRLDPDSLAGKLDFKPHPFRAwLEAELGRRFDYVCVDSPEELRRHPRAItragqvkgngtrhekddrrrir 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1041 ------LDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDT 1114
Cdd:COG4913 600 sryvlgFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAELEAELER 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1115 LKENNLKnVEELnkskelltveNQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVtshQKLEEERSV 1194
Cdd:COG4913 680 LDASSDD-LAAL----------EEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRL---EAAEDLARL 745
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 4506751 1195 LNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNE 1244
Cdd:COG4913 746 ELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
401-941 |
2.15e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.16 E-value: 2.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 401 QHVLELEAKMDQLRTMVEAADR--EKVELLNQLEEEKRK--VEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFE 476
Cdd:COG4913 242 EALEDAREQIELLEPIRELAERyaAARERLAELEYLRAAlrLWFAQRRLELLEAELEELRAELARLEAELERLEARLDAL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 477 KTKADKLQRELEDtrvatvSEKSRIMELEKDLALRVQEVAELRRRLESnkpagdvdmslsLLQEISSLQEKLEVTR---T 553
Cdd:COG4913 322 REELDELEAQIRG------NGGDRLEQLEREIERLERELEERERRRAR------------LEALLAALGLPLPASAeefA 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 554 DHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEH--ANKEN--SDVIALwKSKLETAIASHQQAM-- 627
Cdd:COG4913 384 ALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASleRRKSNipARLLAL-RDALAEALGLDEAELpf 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 628 --EELKV---------SFSKGLGT-------ETAEFAELKTQIE----KMRLDYQHEIENLQNQQDSERAAH--AKEME- 682
Cdd:COG4913 463 vgELIEVrpeeerwrgAIERVLGGfaltllvPPEHYAAALRWVNrlhlRGRLVYERVRTGLPDPERPRLDPDslAGKLDf 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 683 -------------ALRAKLMKV------------------IKEKENSLE-----AIRS----------KLDKAEDQhLVE 716
Cdd:COG4913 543 kphpfrawleaelGRRFDYVCVdspeelrrhpraitragqVKGNGTRHEkddrrRIRSryvlgfdnraKLAALEAE-LAE 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 717 MEDTLNKLQEAEIKVK-ELEVLQAKCNEQTKVIDNFTSQL--KATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQI 793
Cdd:COG4913 622 LEEELAEAEERLEALEaELDALQERREALQRLAEYSWDEIdvASAEREIAELEAELERLDASSDDLAALEEQLEELEAEL 701
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 794 KHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELqiLKEKFAEASEEAV------SVQRSMQETV 867
Cdd:COG4913 702 EELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL--LEERFAAALGDAVerelreNLEERIDALR 779
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 868 NKLHQKEEQ-----------FNMLSSD--------------LEKLREN-LADMEAKFRE-KDEREEQLIKA-KEKLENDI 919
Cdd:COG4913 780 ARLNRAEEEleramrafnreWPAETADldadleslpeylalLDRLEEDgLPEYEERFKElLNENSIEFVADlLSKLRRAI 859
|
650 660
....*....|....*....|..
gi 4506751 920 AEImkmsgdnSSQLTKMNDELR 941
Cdd:COG4913 860 REI-------KERIDPLNDSLK 874
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
777-980 |
2.85e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 57.47 E-value: 2.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 777 SEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEA 856
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 857 VSVQRSMQETVNKLHQKEEQ----FNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQ 932
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQpplaLLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 4506751 933 LTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQ 980
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
410-971 |
3.67e-08 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 58.37 E-value: 3.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 410 MDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELeQSLLFEKTKADKLQRELED 489
Cdd:PRK01156 185 IDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNEL-SSLEDMKNRYESEIKTAES 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 490 TRVATVSEKSRIMELEKDLalrvqevaelrRRLESNKPAGDVDMSLSLLQEISSLQEKLEVtrtdhqreITSLKEHFGAR 569
Cdd:PRK01156 264 DLSMELEKNNYYKELEERH-----------MKIINDPVYKNRNYINDYFKYKNDIENKKQI--------LSNIDAEINKY 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 570 EETHQK--EIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKS--KLETAIASHQQAMEELKVSFSKGLGTETAEF 645
Cdd:PRK01156 325 HAIIKKlsVLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSieSLKKKIEEYSKNIERMSAFISEILKIQEIDP 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 646 AELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKvikEKENSLEAIRSKLDKAEDQHLVEmeDTLNKLQ 725
Cdd:PRK01156 405 DAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEML---NGQSVCPVCGTTLGEEKSNHIIN--HYNEKKS 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 726 EAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATE--------EKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLE 797
Cdd:PRK01156 480 RLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEinksineyNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLK 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 798 IEkNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQF 877
Cdd:PRK01156 560 LE-DLDSKRTSWLNALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEI 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 878 NMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLeNDIAEIMKMSgdnSSQLTKMNDELRLKERDVEELQLKLTKA 957
Cdd:PRK01156 639 QENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRI-NDIEDNLKKS---RKALDDAKANRARLESTIEILRTRINEL 714
|
570
....*....|....
gi 4506751 958 NENASFLQKSIEDM 971
Cdd:PRK01156 715 SDRINDINETLESM 728
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
662-1090 |
4.21e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 57.86 E-value: 4.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 662 EIENLQNQQDSERAAHAKEMEALRAKL------MKVIKEKENSLEAIRSKLDKAEDQ--HLVEMEDTLNKLQEAEIKVKE 733
Cdd:COG4717 54 EADELFKPQGRKPELNLKELKELEEELkeaeekEEEYAELQEELEELEEELEELEAEleELREELEKLEKLLQLLPLYQE 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 734 LEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQL-EAAEKQIKHLEIEKNAESSKASSITR 812
Cdd:COG4717 134 LEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLsLATEEELQDLAEELEELQQRLAELEE 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 813 ELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEE------------QFNML 880
Cdd:COG4717 214 ELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAgvlflvlgllalLFLLL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 881 SSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANEN 960
Cdd:COG4717 294 AREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 961 ASFLQ---KSIEDMTVKAEQSQQEAakkheeekkelerklsDLEKKMETSHNQCQEL-KARYERATSETKTKHEEILQNL 1036
Cdd:COG4717 374 ALLAEagvEDEEELRAALEQAEEYQ----------------ELKEELEELEEQLEELlGELEELLEALDEEELEEELEEL 437
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 4506751 1037 QKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKE 1090
Cdd:COG4717 438 EEELEELEEELEELREELAELEAELEQLEEDGELAELLQELEELKAELRELAEE 491
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
779-1205 |
4.83e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 57.47 E-value: 4.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 779 MKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFaeaseEAVS 858
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREEL-----EKLE 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 859 VQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEndiAEIMKMSGDNSSQLTKMND 938
Cdd:COG4717 123 KLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELE---ELLEQLSLATEEELQDLAE 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 939 ELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLE----------------- 1001
Cdd:COG4717 200 ELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLglggsllsliltiagvl 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1002 --------------KKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQ 1067
Cdd:COG4717 280 flvlgllallflllAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEEL 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1068 ADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKEnnlkNVEELNKSKELLTVENQKmEEFRKEI 1147
Cdd:COG4717 360 EEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEE----QLEELLGELEELLEALDE-EELEEEL 434
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 4506751 1148 ETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEvTSHQKLEEERSVLNNQLLEMKKR 1205
Cdd:COG4717 435 EELEEELEELEEELEELREELAELEAELEQLEED-GELAELLQELEELKAELRELAEE 491
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
428-959 |
6.12e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 57.34 E-value: 6.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 428 LNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTK----ADKLQRELEDTRVATVSEKSRIME 503
Cdd:TIGR04523 126 LNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLlekeKLNIQKNIDKIKNKLLKLELLLSN 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 504 LE------KDLALRVQEVAELRRRLESNKPAGDVDMSlSLLQEISSLQEKLEVTRTDHQREITSLKEhfgareetHQKEI 577
Cdd:TIGR04523 206 LKkkiqknKSLESQISELKKQNNQLKDNIEKKQQEIN-EKTTEISNTQTQLNQLKDEQNKIKKQLSE--------KQKEL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 578 KALYTATEKLSKENESLKSKLEHANKENSDVialWKSKLETAIASHQQAMEELKVSFSKglgtETAEFAELKTQIEKMRl 657
Cdd:TIGR04523 277 EQNNKKIKELEKQLNQLKSEISDLNNQKEQD---WNKELKSELKNQEKKLEEIQNQISQ----NNKIISQLNEQISQLK- 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 658 dyqHEIENLQNQQDSeraahakemealrakLMKVIKEKENSLEairsKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVL 737
Cdd:TIGR04523 349 ---KELTNSESENSE---------------KQRELEEKQNEIE----KLKKENQSYKQEIKNLESQINDLESKIQNQEKL 406
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 738 QAKCNEQTKVIDnftsqlKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGR 817
Cdd:TIGR04523 407 NQQKDEQIKKLQ------QEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKI 480
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 818 ELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENL--ADME 895
Cdd:TIGR04523 481 KQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELkkENLE 560
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 4506751 896 AKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANE 959
Cdd:TIGR04523 561 KEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKK 624
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
1405-1421 |
1.04e-07 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 49.00 E-value: 1.04e-07
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
332-702 |
1.46e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 56.23 E-value: 1.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 332 RTGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKAtshvgeieqelalardghDQHVLELEAKMD 411
Cdd:TIGR02169 651 KSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRI------------------ENRLDELSQELS 712
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 412 QLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTR 491
Cdd:TIGR02169 713 DASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSR 792
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 492 VATVSEKSRimELEKDLALRVQEVAELRRRLESNKPagDVDMSLSLLQEISSLQEKLEVTRTDHQREITSL---KEHFGA 568
Cdd:TIGR02169 793 IPEIQAELS--KLEEEVSRIEARLREIEQKLNRLTL--EKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLngkKEELEE 868
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 569 REETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDV---IALWKSKLETAIASHQQAMEELK-VSFSKGLGTETAE 644
Cdd:TIGR02169 869 ELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELeaqIEKKRKRLSELKAKLEALEEELSeIEDPKGEDEEIPE 948
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 4506751 645 FAELKTQIEKMRLDYQHEIE-----NLQNQQDSERAahAKEMEALRAKLMKVIKEKENSLEAI 702
Cdd:TIGR02169 949 EELSLEDVQAELQRVEEEIRalepvNMLAIQEYEEV--LKRLDELKEKRAKLEEERKAILERI 1009
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1021-1225 |
1.51e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.54 E-value: 1.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1021 ATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQ-ADKAKAAQTAEDAMQIMEQ----MTKEKTETL 1095
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRiAALARRIRALEQELAALEAelaeLEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1096 ASLEDTKQTNAKLQNELDTLKENN----LKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKL 1171
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPplalLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 4506751 1172 AEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSIS 1225
Cdd:COG4942 177 EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIA 230
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
353-1215 |
1.61e-07 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 56.60 E-value: 1.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 353 LQEALKEKQQHIEQLLAERDLERAEVAKATSHV-GEIEQELALARDGhdqhvlELEAKMDQLRTMVEAADREKVEllnql 431
Cdd:TIGR01612 625 LKKIIENNNAYIDELAKISPYQVPEHLKNKDKIySTIKSELSKIYED------DIDALYNELSSIVKENAIDNTE----- 693
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 432 eeEKRKVEDLQFRVEEESITKGDLETQTKLEHArikeleqsllfekTKADKLQRELEDTRVATvsEKSRIMELEKDLALR 511
Cdd:TIGR01612 694 --DKAKLDDLKSKIDKEYDKIQNMETATVELHL-------------SNIENKKNELLDIIVEI--KKHIHGEINKDLNKI 756
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 512 VQEVAELRRRLESN-----KPAGDVDMSLSLLQEISSlqeklevtRTDHQREITSLKEHFGAREETHQKE-IKALYTATE 585
Cdd:TIGR01612 757 LEDFKNKEKELSNKindyaKEKDELNKYKSKISEIKN--------HYNDQINIDNIKDEDAKQNYDKSKEyIKTISIKED 828
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 586 KLSKENESLKS-------------KLEHANKENSDV----IALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAEL 648
Cdd:TIGR01612 829 EIFKIINEMKFmkddflnkvdkfiNFENNCKEKIDSeheqFAELTNKIKAEISDDKLNDYEKKFNDSKSLINEINKSIEE 908
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 649 KTQIEKMRLDYQHEIENLQNQQDSERAAHAKEmEALRAKLMKVIKEKENSLEAIRSKLDKaedqhlveMEDTL-NKLQEA 727
Cdd:TIGR01612 909 EYQNINTLKKVDEYIKICENTKESIEKFHNKQ-NILKEILNKNIDTIKESNLIEKSYKDK--------FDNTLiDKINEL 979
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 728 EIKVKELEV--LQAKCNEQTKVIDNFTSQLkateeklldldalrkasseGKSEMKKLRQQLEAAEKQIKHLEieknaesS 805
Cdd:TIGR01612 980 DKAFKDASLndYEAKNNELIKYFNDLKANL-------------------GKNKENMLYHQFDEKEKATNDIE-------Q 1033
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 806 KASSITRELQGRELKLTNLQENLSEvsQVKETLEKELQILKEKFAEASEEAVSvqrsmqeTVNKLHQKEEQFNMlsSDLE 885
Cdd:TIGR01612 1034 KIEDANKNIPNIEIAIHTSIYNIID--EIEKEIGKNIELLNKEILEEAEINIT-------NFNEIKEKLKHYNF--DDFG 1102
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 886 KlrenladmEAKFREKDEreeqlikaKEKLENDIAEIMKMSGDNSSQLTKMN-------DELRLKERDVEELQLKlTKAN 958
Cdd:TIGR01612 1103 K--------EENIKYADE--------INKIKDDIKNLDQKIDHHIKALEEIKkksenyiDEIKAQINDLEDVADK-AISN 1165
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 959 ENASFLQKSIEDMTVKAEQSQQ--EAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNL 1036
Cdd:TIGR01612 1166 DDPEEIEKKIENIVTKIDKKKNiyDEIKKLLNEIAEIEKDKTSLEEVKGINLSYGKNLGKLFLEKIDEEKKKSEHMIKAM 1245
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1037 QKTLLDTED-KLKGAREENSGLLQ-----ELEELRKQADKAKAAQTA------------EDAMQIMEQMTKE------KT 1092
Cdd:TIGR01612 1246 EAYIEDLDEiKEKSPEIENEMGIEmdikaEMETFNISHDDDKDHHIIskkhdenisdirEKSLKIIEDFSEEsdindiKK 1325
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1093 ETLASLEDTKQTNAKLQNELDTLkeNNLKNVEELNKSKELLtvenQKMEEFRKEIETLKQ---AAAQKSQQLSALQEENV 1169
Cdd:TIGR01612 1326 ELQKNLLDAQKHNSDINLYLNEI--ANIYNILKLNKIKKII----DEVKEYTKEIEENNKnikDELDKSEKLIKKIKDDI 1399
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|
gi 4506751 1170 KLAEelGRSRDEVTSHQKLEEE----RSVLNNQLLEMKKRESKFIKDADE 1215
Cdd:TIGR01612 1400 NLEE--CKSKIESTLDDKDIDEcikkIKELKNHILSEESNIDTYFKNADE 1447
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
650-1325 |
2.10e-07 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 55.85 E-value: 2.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 650 TQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIR--SKLDKAE--DQHLVEMEDTLNKLQ 725
Cdd:COG5022 806 LGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKrfSLLKKETiyLQSAQRVELAERQLQ 885
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 726 EAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATE--------EKLLDL-DALRKASSEGKSEMK----KLRQQLEAAEKQ 792
Cdd:COG5022 886 ELKIDVKSISSLKLVNLELESEIIELKKSLSSDLienlefktELIARLkKLLNNIDLEEGPSIEyvklPELNKLHEVESK 965
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 793 IKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQ 872
Cdd:COG5022 966 LKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKIISSESTELSIL 1045
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 873 KEEQfnmlssDLEKLrenladMEAKFREKDEREEQLIKAKEKLENDIAEImkmsgdnSSQLTKMNDELRLKERDVEELQL 952
Cdd:COG5022 1046 KPLQ------KLKGL------LLLENNQLQARYKALKLRRENSLLDDKQL-------YQLESTENLLKTINVKDLEVTNR 1106
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 953 KLTKAnenASFLQKSIedmtvkaeqSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEI 1032
Cdd:COG5022 1107 NLVKP---ANVLQFIV---------AQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPF 1174
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1033 LQNLQKTLLD---TEDKLKGAREENSGLLQELEELRKQ-------ADKAKAAQTAEDAMqimeqmtkekTETLASLEDTK 1102
Cdd:COG5022 1175 AALSEKRLYQsalYDEKSKLSSSEVNDLKNELIALFSKifsgwprGDKLKKLISEGWVP----------TEYSTSLKGFN 1244
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1103 QTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKME-EFRKEIETLKQAAAQK-SQQLSALqeeNVKLAEELGRSRD 1180
Cdd:COG5022 1245 NLNKKFDTPASMSNEKLLSLLNSIDNLLSSYKLEEEVLPaTINSLLQYINVGLFNAlRTKASSL---RWKSATEVNYNSE 1321
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1181 EVtSHQKLEEERSVLNNQLLEMKKRESKFIKDadeeKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKslhS 1260
Cdd:COG5022 1322 EL-DDWCREFEISDVDEELEELIQAVKVLQLL----KDDLNKLDELLDACYSLNPAEIQNLKSRYDPADKENNLPK---E 1393
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1261 VVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQAD-----EDERAQESQIDFLNSVIVDLQRK 1325
Cdd:COG5022 1394 ILKKIEALLIKQELQLSLEGKDETEVHLSEIFSEEKSLISLDrnsiyKEEVLSSLSALLTKEKIALLDRK 1463
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
532-1290 |
2.14e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 55.75 E-value: 2.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 532 DMSLSLLQEISSLQEKLEVTRTDHQREITSLKEhfgaREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSdvial 611
Cdd:TIGR00618 187 AKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHE----RKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLK----- 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 612 WKSKLETAIASHQQAMEELKVSfskglgTETAEFAELKTQIEKMRLDYQHEIEnlQNQQDSERAAHAKEMEALRAKLM-- 689
Cdd:TIGR00618 258 KQQLLKQLRARIEELRAQEAVL------EETQERINRARKAAPLAAHIKAVTQ--IEQQAQRIHTELQSKMRSRAKLLmk 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 690 -KVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQaKCNEQTKVIDNFTSQLKATEEKLLDLDAL 768
Cdd:TIGR00618 330 rAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQ-HIHTLQQQKTTLTQKLQSLCKELDILQRE 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 769 RKASSEGKSEMKKLRQQLEAAEKQIkhlEIEKNAESSKASSITRELQGRELKLTNLQEnLSEVSQVKETLEKELQILKEK 848
Cdd:TIGR00618 409 QATIDTRTSAFRDLQGQLAHAKKQQ---ELQQRYAELCAAAITCTAQCEKLEKIHLQE-SAQSLKEREQQLQTKEQIHLQ 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 849 FAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKfrekDEREEQLIKAKEKLENDIAEIMKmsgd 928
Cdd:TIGR00618 485 ETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRG----EQTYAQLETSEEDVYHQLTSERK---- 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 929 nssQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMtvkaeqsQQEAAKKHEEEKKELERKLSDLEKKMETSH 1008
Cdd:TIGR00618 557 ---QRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRL-------QDLTEKLSEAEDMLACEQHALLRKLQPEQD 626
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1009 NQcqelkaryeratsETKTKHEEILQNLQKTLLdtedklkgareensGLLQELEELRKQADKAKAAQTAEDAMQIMEQmt 1088
Cdd:TIGR00618 627 LQ-------------DVRLHLQQCSQELALKLT--------------ALHALQLTLTQERVREHALSIRVLPKELLAS-- 677
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1089 kektetlasledtkqtNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEEN 1168
Cdd:TIGR00618 678 ----------------RQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDAL 741
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1169 VKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKREskfIKDADEEKASLQKSISITSALLTEKDAELEKLRNEvtvl 1248
Cdd:TIGR00618 742 NQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAE---LSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPS---- 814
|
730 740 750 760
....*....|....*....|....*....|....*....|....*...
gi 4506751 1249 rGENASAKSLHSVVQTLESDKVKLELK------VKNLELQLKENKRQL 1290
Cdd:TIGR00618 815 -DEDILNLQCETLVQEEEQFLSRLEEKsatlgeITHQLLKYEECSKQL 861
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
345-630 |
2.86e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 55.45 E-value: 2.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 345 RKISGTTALQEALKEKQQHIEQLLAERDLERAEVAkatshvgEIEQELALARDGHDQHVLELEAKMDQLRTMVEAA---- 420
Cdd:TIGR02168 726 RQISALRKDLARLEAEVEQLEERIAQLSKELTELE-------AEIEELEERLEEAEEELAEAEAEIEELEAQIEQLkeel 798
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 421 ---DREKVELLNQLEEEKR-------KVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDT 490
Cdd:TIGR02168 799 kalREALDELRAELTLLNEeaanlreRLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAL 878
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 491 RVATVSEKSRIMELEKDLALRVQEVAELRRRL--------ESNKPAGDVDMSLS-LLQEISSLQEKLEVTRTDHQREITS 561
Cdd:TIGR02168 879 LNERASLEEALALLRSELEELSEELRELESKRselrreleELREKLAQLELRLEgLEVRIDNLQERLSEEYSLTLEEAEA 958
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 4506751 562 LKEHFGAREETHQKEIKALYTATEKLSKEN-------ESLKSKLEHANKENSDvialwkskLETAIASHQQAMEEL 630
Cdd:TIGR02168 959 LENKIEDDEEEARRRLKRLENKIKELGPVNlaaieeyEELKERYDFLTAQKED--------LTEAKETLEEAIEEI 1026
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
405-860 |
6.85e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.00 E-value: 6.85e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 405 ELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLlfEKTKADKLQ 484
Cdd:COG4717 50 RLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREEL--EKLEKLLQL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 485 RELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLEsnkpagdvdmslSLLQEISSLQEKLE----VTRTDHQREIT 560
Cdd:COG4717 128 LPLYQELEALEAELAELPERLEELEERLEELRELEEELE------------ELEAELAELQEELEelleQLSLATEEELQ 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 561 SLKEHFG---AREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKG 637
Cdd:COG4717 196 DLAEELEelqQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTI 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 638 LGTETAEFAELKTQIEKMRLdyqheiENLQNQQDSERAAHAKEMEALRAKlmkvikekenSLEAIRSKLDKAEDQHLVEM 717
Cdd:COG4717 276 AGVLFLVLGLLALLFLLLAR------EKASLGKEAEELQALPALEELEEE----------ELEELLAALGLPPDLSPEEL 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 718 EDTLNKLQEAEIKVKELEVL--QAKCNEQTKVIDNFTSQLKAT-EEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIK 794
Cdd:COG4717 340 LELLDRIEELQELLREAEELeeELQLEELEQEIAALLAEAGVEdEEELRAALEQAEEYQELKEELEELEEQLEELLGELE 419
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 4506751 795 HLEIEKNAES--SKASSITRELQGRELKLTNLQENLSEVSQVKETLEK---------ELQILKEKFAEASEEAVSVQ 860
Cdd:COG4717 420 ELLEALDEEEleEELEELEEELEELEEELEELREELAELEAELEQLEEdgelaellqELEELKAELRELAEEWAALK 496
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
590-1362 |
7.17e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 54.28 E-value: 7.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 590 ENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAM-------EELKVSFSKGLgtETAEFAELKTQIEKMRLDYQHE 662
Cdd:TIGR00606 124 EKVSLSSKCAEIDREMISHLGVSKAVLNNVIFCHQEDSnwplsegKALKQKFDEIF--SATRYIKALETLRQVRQTQGQK 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 663 IENLQN-----QQDSERAAHAKEM----EALRAKLMKVIKEKENSLEAIRSKLDKAEDQ--HLVEMEDTLNKLQE----- 726
Cdd:TIGR00606 202 VQEHQMelkylKQYKEKACEIRDQitskEAQLESSREIVKSYENELDPLKNRLKEIEHNlsKIMKLDNEIKALKSrkkqm 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 727 ----AEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLdalrkassegKSEMKKLRQQLEAAEKQIKHLEIEKNA 802
Cdd:TIGR00606 282 ekdnSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDC----------QRELEKLNKERRLLNQEKTELLVEQGR 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 803 ESSKASSITRELQGRELKLTNLQENLsEVSQVKETLEKELQI---LKEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnm 879
Cdd:TIGR00606 352 LQLQADRHQEHIRARDSLIQSLATRL-ELDGFERGPFSERQIknfHTLVIERQEDEAKTAAQLCADLQSKERLKQEQ--- 427
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 880 lssdLEKLREnlaDMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGdNSSQLTKMNDELRLKERDveelqlkLTKANE 959
Cdd:TIGR00606 428 ----ADEIRD---EKKGLGRTIELKKEILEKKQEELKFVIKELQQLEG-SSDRILELDQELRKAERE-------LSKAEK 492
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 960 NASFLQKSIEDMTVKAEQSqqeaakkheeekkelerklsDLEKKMetshnqcqelkaRYERATSETKTKHEEILQNLQKT 1039
Cdd:TIGR00606 493 NSLTETLKKEVKSLQNEKA--------------------DLDRKL------------RKLDQEMEQLNHHTTTRTQMEML 540
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1040 LLDTEDKLKGAREENSgllQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDtlkeNN 1119
Cdd:TIGR00606 541 TKDKMDKDEQIRKIKS---RHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHIN----NE 613
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1120 LKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQL 1199
Cdd:TIGR00606 614 LESKEEQLSSYEDKLFDVCGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAEL 693
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1200 LEMKKRESKFIKDADEEKASLQKSISitsalltekdaELEKLRNEVTVLrgenasAKSLHSVVQTLESDKVKLELKVKNL 1279
Cdd:TIGR00606 694 QEFISDLQSKLRLAPDKLKSTESELK-----------KKEKRRDEMLGL------APGRQSIIDLKEKEIPELRNKLQKV 756
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1280 ELQLKENKRQLSSSSGNTDTQADEDERAQESQIDFlnSVIVDLQRKNQDLKMKVEMMSEAALNGNGDdlNNYDSDDQEKQ 1359
Cdd:TIGR00606 757 NRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDV--TIMERFQMELKDVERKIAQQAAKLQGSDLD--RTVQQVNQEKQ 832
|
...
gi 4506751 1360 SKK 1362
Cdd:TIGR00606 833 EKQ 835
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
771-1109 |
9.72e-07 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 53.68 E-value: 9.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 771 ASSEGKsemkklrQQLEAAEKQIKHLEIEKNAESSKASSitrELQGRELKlTNLQENLSEVSQVKETLEKELQILKEKFA 850
Cdd:NF012221 1536 ATSESS-------QQADAVSKHAKQDDAAQNALADKERA---EADRQRLE-QEKQQQLAAISGSQSQLESTDQNALETNG 1604
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 851 EASEEAVSV-QRSMQETVNKLHQKEEQFNMLSSDLEKL----RENLADmeakfREKDEREEQLIKAKEKLENDIAEImkm 925
Cdd:NF012221 1605 QAQRDAILEeSRAVTKELTTLAQGLDALDSQATYAGESgdqwRNPFAG-----GLLDRVQEQLDDAKKISGKQLADA--- 1676
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 926 SGDNSSQLTKMNDELRLKERDVEelqlkltKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKElerklsdlEKKME 1005
Cdd:NF012221 1677 KQRHVDNQQKVKDAVAKSEAGVA-------QGEQNQANAEQDIDDAKADAEKRKDDALAKQNEAQQA--------ESDAN 1741
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1006 TSHNQCQElkaRYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELrKQADKAKAAQTAEDAMQIME 1085
Cdd:NF012221 1742 AAANDAQS---RGEQDASAAENKANQAQADAKGAKQDESDKPNRQGAAGSGLSGKAYSV-EGVAEPGSHINPDSPAAADG 1817
|
330 340
....*....|....*....|....*
gi 4506751 1086 QMTKEKTE-TLASLEDTKQTNAKLQ 1109
Cdd:NF012221 1818 RFSEGLTEqEQEALEGATNAVNRLQ 1842
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
636-1090 |
1.31e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 52.85 E-value: 1.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 636 KGLGTETAEFAELKTQIEKMRldyqHEIENLQNQQDSERAAHAKEMEALRA-KLMKVIKEKENSLEAIRSKLDKAEdQHL 714
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELE----EELEELEAELEELREELEKLEKLLQLlPLYQELEALEAELAELPERLEELE-ERL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 715 VEMEDTLNKLQEAEikvKELEVLQAKCNEQTKVIDNftSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIK 794
Cdd:COG4717 156 EELRELEEELEELE---AELAELQEELEELLEQLSL--ATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELE 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 795 HLEIEKNAEsskasSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKE 874
Cdd:COG4717 231 QLENELEAA-----ALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAE 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 875 EqfnmlssdleklrenladMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKL 954
Cdd:COG4717 306 E------------------LQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEE 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 955 TKANENASFLQ---KSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEE 1031
Cdd:COG4717 368 LEQEIAALLAEagvEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEE 447
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 4506751 1032 iLQNLQKTLLDTEDKLKGAREEN--SGLLQELEELRKQ-ADKAKAAQTAEDAMQIMEQMTKE 1090
Cdd:COG4717 448 -LEELREELAELEAELEQLEEDGelAELLQELEELKAElRELAEEWAALKLALELLEEAREE 508
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
482-945 |
1.38e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 53.42 E-value: 1.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 482 KLQRELEDTRVATVSEKSRIMELEKDLAlrvqEVAELRRRLESnkpagDVDMS---LSLLQEISSLQEKLEVTRTDHQRE 558
Cdd:COG3096 289 ELRRELFGARRQLAEEQYRLVEMARELE----ELSARESDLEQ-----DYQAAsdhLNLVQTALRQQEKIERYQEDLEEL 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 559 ITSLKEHFGAREETH--QKEIKALYTATEKlskENESLKSKLehankensdviALWKSKLET----AIASHQ--QAMEEL 630
Cdd:COG3096 360 TERLEEQEEVVEEAAeqLAEAEARLEAAEE---EVDSLKSQL-----------ADYQQALDVqqtrAIQYQQavQALEKA 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 631 KVSFskGLGTETAEFAELKTQIEKMRLDYQHEiENLQNQQ-----DSERAAHAKEMEALRAKLMKVikEKENSLEAIRSK 705
Cdd:COG3096 426 RALC--GLPDLTPENAEDYLAAFRAKEQQATE-EVLELEQklsvaDAARRQFEKAYELVCKIAGEV--ERSQAWQTAREL 500
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 706 LDKAEDQ------------HLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLkatEEKLLDLDALRKASS 773
Cdd:COG3096 501 LRRYRSQqalaqrlqqlraQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAEL---EAQLEELEEQAAEAV 577
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 774 EGKSEMkklRQQLEAAEKQIKHLEieknaessKASSITRELQGRelkLTNLQEnlsevsQVKETLekelqilkekfaeas 853
Cdd:COG3096 578 EQRSEL---RQQLEQLRARIKELA--------ARAPAWLAAQDA---LERLRE------QSGEAL--------------- 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 854 EEAVSVQRSMQETVNKLHQKEeqfnmlssdleklrenladmeakfREKDereeQLIKAKEKLENDIAEIMKMSGDNSSQL 933
Cdd:COG3096 623 ADSQEVTAAMQQLLEREREAT------------------------VERD----ELAARKQALESQIERLSQPGGAEDPRL 674
|
490
....*....|..
gi 4506751 934 tkmndeLRLKER 945
Cdd:COG3096 675 ------LALAER 680
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
820-1049 |
1.69e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 1.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 820 KLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFR 899
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 900 EKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELR-----LKERdVEELQLKLTKANENASFLQKSIEDMTvK 974
Cdd:COG4942 101 AQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKylapaRREQ-AEELRADLAELAALRAELEAERAELE-A 178
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 4506751 975 AEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKG 1049
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKG 253
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
496-1096 |
1.95e-06 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 52.45 E-value: 1.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 496 SEKSRIMELEKDLALRVQEVAELRRRLE---SNKPAGDVDMSLSLLQEISSLQEKLEVTRTdhqreiTSLKEHFgaREET 572
Cdd:pfam07111 27 TQRPTVTMWEQDVSGDGQGPGRRGRSLElegSQALSQQAELISRQLQELRRLEEEVRLLRE------TSLQQKM--RLEA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 573 HQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQI 652
Cdd:pfam07111 99 QAMELDALAVAEKAGQAEAEGLRAALAGAEMVRKNLEEGSQRELEEIQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 653 EKMRLDYQHEIENL---QNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAE-DQHLVEMEDTLNKLQEAE 728
Cdd:pfam07111 179 NSLETKRAGEAKQLaeaQKEAELLRKQLSKTQEELEAQVTLVESLRKYVGEQVPPEVHSQTwELERQELLDTMQHLQEDR 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 729 IKVKE-LEVLQAKCNEQTKVI----------------------DNFTSQLKATEEKLLDLDALRKASS-EGKSEMKKLRQ 784
Cdd:pfam07111 259 ADLQAtVELLQVRVQSLTHMLalqeeeltrkiqpsdslepefpKKCRSLLNRWREKVFALMVQLKAQDlEHRDSVKQLRG 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 785 QLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQ 864
Cdd:pfam07111 339 QVAELQEQVTSQSQEQAILQRALQDKAAEVEVERMSAKGLQMELSRAQEARRRQQQQTASAEEQLKFVVNAMSSTQIWLE 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 865 ETVNKLHQKEEQF----NMLSSDLEKLRENLADMEAKFREKDEREEQ--LIKAKEKLENDIAEIMKMSGDNSSQLtkmND 938
Cdd:pfam07111 419 TTMTRVEQAVARIpslsNRLSYAVRKVHTIKGLMARKVALAQLRQEScpPPPPAPPVDADLSLELEQLREERNRL---DA 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 939 ELRLKERDVeelQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARY 1018
Cdd:pfam07111 496 ELQLSAHLI---QQEVGRAREQGEAERQQLSEVAQQLEQELQRAQESLASVGQQLEVARQGQQESTEEAASLRQELTQQQ 572
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 4506751 1019 ERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKaaQTAEDAMQIMEQMTKEKTETLA 1096
Cdd:pfam07111 573 EIYGQALQEKVAEVETRLREQLSDTKRRLNEARREQAKAVVSLRQIQHRATQEK--ERNQELRRLQDEARKEEGQRLA 648
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
463-1244 |
2.12e-06 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 52.52 E-value: 2.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 463 HARIKELEQSLlfektkaDKLQRELEDTRVATVSEKSRIM-----ELEKDLALRVQEVAELRRRLESNKPAGDVDMSLSL 537
Cdd:pfam10174 2 QAQLRDLQREN-------ELLRRELDIKESKLGSSMNSIKtfwspELKKERALRKEEAARISVLKEQYRVTQEENQHLQL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 538 lqEISSLQEKLEVTR-------TDHQREITSLKEHFGAREEThQKEIKALYTATEKLSKENESLKSKLEHANKEnsdvIA 610
Cdd:pfam10174 75 --TIQALQDELRAQRdlnqllqQDFTTSPVDGEDKFSTPELT-EENFRRLQSEHERQAKELFLLRKTLEEMELR----IE 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 611 LWKSKLETAIASHQQAMEELKvsfSKGLGTETAEFAELKTQ---IEKMRLDY------QHEIENLQNQQDSERAAHAKEM 681
Cdd:pfam10174 148 TQKQTLGARDESIKKLLEMLQ---SKGLPKKSGEEDWERTRriaEAEMQLGHlevlldQKEKENIHLREELHRRNQLQPD 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 682 EALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEK 761
Cdd:pfam10174 225 PAKTKALQTVIEMKDTKISSLERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESE 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 762 LL----DLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAesskassITRELQGRELKLTNLQENLSEVSQVKET 837
Cdd:pfam10174 305 LLalqtKLETLTNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDA-------LRLRLEEKESFLNKKTKQLQDLTEEKST 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 838 LEKELQILKEKfaeaseeavsvqrsmqetvnkLHQKEEQFNMLSSDLEKLRENLadmeakfREKDEREEQLIKAKEKLEN 917
Cdd:pfam10174 378 LAGEIRDLKDM---------------------LDVKERKINVLQKKIENLQEQL-------RDKDKQLAGLKERVKSLQT 429
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 918 DiaeimkmSGDNSSQLTKMNDELRLKERDVEELQLkltkanenasflQKSIEDmTVKAEQSQQEAAKKHeeekkelerkl 997
Cdd:pfam10174 430 D-------SSNTDTALTTLEEALSEKERIIERLKE------------QRERED-RERLEELESLKKENK----------- 478
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 998 sDLEKKMETSHNQCQElkaryeRATSETKTKheEILQNLQKTLLDTEDKLKGAREEnsgLLQELEELRKQADKAKAAQTA 1077
Cdd:pfam10174 479 -DLKEKVSALQPELTE------KESSLIDLK--EHASSLASSGLKKDSKLKSLEIA---VEQKKEECSKLENQLKKAHNA 546
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1078 EDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENnLKNVEELNKSKElltvenQKMEEFRKEIETLKQAAAQK 1157
Cdd:pfam10174 547 EEAVRTNPEINDRIRLLEQEVARYKEESGKAQAEVERLLGI-LREVENEKNDKD------KKIAELESLTLRQMKEQNKK 619
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1158 SQQLSALQ-EENVKLAEELGRSRDEvtshqKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLqksiSITSALLTEKDA 1236
Cdd:pfam10174 620 VANIKHGQqEMKKKGAQLLEEARRR-----EDNLADNSQQLQLEELMGALEKTRQELDATKARL----SSTQQSLAEKDG 690
|
....*...
gi 4506751 1237 ELEKLRNE 1244
Cdd:pfam10174 691 HLTNLRAE 698
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
832-1079 |
2.35e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.69 E-value: 2.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 832 SQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKA 911
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 912 KEKLENDIAEIMKMSGDNSSQLTKMndeLRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAkkheeekk 991
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLA---LLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRA-------- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 992 elerklsDLEKKMETSHNQCQELKARYERATSEtKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKA 1071
Cdd:COG4942 168 -------ELEAERAELEALLAELEEERAALEAL-KAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
....*...
gi 4506751 1072 KAAQTAED 1079
Cdd:COG4942 240 AERTPAAG 247
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
915-1257 |
3.45e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.99 E-value: 3.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 915 LENDIAEIMKMSG--------------DNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEdmtvKAEQSQQ 980
Cdd:TIGR02169 140 LQGDVTDFISMSPverrkiideiagvaEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRRERE----KAERYQA 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 981 EAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQnLQKTLLDTEDKLKGAREENSGLLQE 1060
Cdd:TIGR02169 216 LLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEE-IEQLLEELNKKIKDLGEEEQLRVKE 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1061 -LEELrkQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKElltvenqK 1139
Cdd:TIGR02169 295 kIGEL--EAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKE-------E 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1140 MEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTS----HQKLEEERSVLNNQLLEMKKRESKFI---KD 1212
Cdd:TIGR02169 366 LEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRlqeeLQRLSEELADLNAAIAGIEAKINELEeekED 445
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 4506751 1213 ADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKS 1257
Cdd:TIGR02169 446 KALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQR 490
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
349-1119 |
7.35e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 50.94 E-value: 7.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 349 GTTALQEALKEKQqhiEQLLAErdLERAEVAKATSHvgeiEQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELL 428
Cdd:pfam01576 313 DTTAAQQELRSKR---EQEVTE--LKKALEEETRSH----EAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALE 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 429 NQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDL 508
Cdd:pfam01576 384 SENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDV 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 509 AL---RVQEVAELRRRLESNKPAGDVDMSlSLLQEISSLQEKLE---VTRTDHQREITSLKEHFGAREETHQKEIKALYT 582
Cdd:pfam01576 464 SSlesQLQDTQELLQEETRQKLNLSTRLR-QLEDERNSLQEQLEeeeEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEA 542
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 583 ATE---KLSKENESLKSKLEHAnkensdviALWKSKLETAIASHQQAMEELKVSfskgLGTETAEFAEL-KTQIEKMRLD 658
Cdd:pfam01576 543 LEEgkkRLQRELEALTQQLEEK--------AAAYDKLEKTKNRLQQELDDLLVD----LDHQRQLVSNLeKKQKKFDQML 610
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 659 YQHEIENLQNQQDSERA-AHAKEMEalrAKLMKVIKEKENSLEAiRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELE-- 735
Cdd:pfam01576 611 AEEKAISARYAEERDRAeAEAREKE---TRALSLARALEEALEA-KEELERTNKQLRAEMEDLVSSKDDVGKNVHELErs 686
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 736 --VLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASS-------EGKSEMKKLRQQLEAaeKQIKHLEIEKNAESSK 806
Cdd:pfam01576 687 krALEQQVEEMKTQLEELEDELQATEDAKLRLEVNMQALKaqferdlQARDEQGEEKRRQLV--KQVRELEAELEDERKQ 764
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 807 ASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEK 886
Cdd:pfam01576 765 RAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELLQ 844
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 887 LRENLADME-AKFREKDEREEqlikakekLENDIAeimkmsgDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQ 965
Cdd:pfam01576 845 LQEDLAASErARRQAQQERDE--------LADEIA-------SGASGKSALQDEKRRLEARIAQLEEELEEEQSNTELLN 909
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 966 KSIEDMTVKAEQSQQEAAKKHEEEKKelerklsdLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTED 1045
Cdd:pfam01576 910 DRLRKSTLQVEQLTTELAAERSTSQK--------SESARQQLERQNKELKAKLQEMEGTVKSKFKSSIAALEAKIAQLEE 981
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1046 KLKGAREENSG--------------LLQELEELRKQADKAKaaQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNE 1111
Cdd:pfam01576 982 QLEQESRERQAanklvrrtekklkeVLLQVEDERRHADQYK--DQAEKGNSRMKQLKRQLEEAEEEASRANAARRKLQRE 1059
|
....*...
gi 4506751 1112 LDTLKENN 1119
Cdd:pfam01576 1060 LDDATESN 1067
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
753-1310 |
1.27e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 49.72 E-value: 1.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 753 SQLKATEEKLLD----LDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENL 828
Cdd:pfam05483 99 AELKQKENKLQEnrkiIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYER 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 829 SEVSQVKETLEKELQILKEKFAEA---------------SEEAVSVQRSMQETVNKLHQKEEQFNML------------- 880
Cdd:pfam05483 179 EETRQVYMDLNNNIEKMILAFEELrvqaenarlemhfklKEDHEKIQHLEEEYKKEINDKEKQVSLLliqitekenkmkd 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 881 -SSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEEL-------QL 952
Cdd:pfam05483 259 lTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLteekeaqME 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 953 KLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKmETSHNQCQELKARYERATSETKT--KHE 1030
Cdd:pfam05483 339 ELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKK-SSELEEMTKFKNNKEVELEELKKilAED 417
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1031 EILQNLQKTLLDTEDKLKGAREENSGLLQELE-ELRKQADKAKAAQTAED--AMQIMEQMTKEKTETLASLEDTKQTNaK 1107
Cdd:pfam05483 418 EKLLDEKKQFEKIAEELKGKEQELIFLLQAREkEIHDLEIQLTAIKTSEEhyLKEVEDLKTELEKEKLKNIELTAHCD-K 496
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1108 LQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEEnvklaeeLGRSRDEVTSHQK 1187
Cdd:pfam05483 497 LLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREE-------FIQKGDEVKCKLD 569
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1188 LEEERSVLNNQLLEMKKRESKFIKDADEekaSLQKSISITSALLTEKDAELEKLRNEVTvlrgenASAKSLHSvvqtles 1267
Cdd:pfam05483 570 KSEENARSIEYEVLKKEKQMKILENKCN---NLKKQIENKNKNIEELHQENKALKKKGS------AENKQLNA------- 633
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 4506751 1268 dkvkLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQES 1310
Cdd:pfam05483 634 ----YEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEK 672
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
336-523 |
1.43e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.91 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 336 LTETSSRYARKISGTTALQEALKEKQQHIEQLlAERDLERAEVAKATSHVGEIEQELALARDGHDQhVLELEAKMDQLRT 415
Cdd:COG4913 622 LEEELAEAEERLEALEAELDALQERREALQRL-AEYSWDEIDVASAEREIAELEAELERLDASSDD-LAALEEQLEELEA 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 416 MVEAADREKVELLNQLEEEKRKVEDLQFRVEeesitkgdlETQTKLEHA-RIKELEQSLLFEKtkadKLQRELEDTRVAT 494
Cdd:COG4913 700 ELEELEEELDELKGEIGRLEKELEQAEEELD---------ELQDRLEAAeDLARLELRALLEE----RFAAALGDAVERE 766
|
170 180
....*....|....*....|....*....
gi 4506751 495 VSEksrimELEKDLALRVQEVAELRRRLE 523
Cdd:COG4913 767 LRE-----NLEERIDALRARLNRAEEELE 790
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
348-604 |
1.57e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 1.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 348 SGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlardghdqhvlELEAKMDQLRTMVEAADREKVEL 427
Cdd:COG4942 13 LAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLA-----------ALERRIAALARRIRALEQELAAL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 428 LNQLEEEKRKVEDLQFRVEEEsitKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKD 507
Cdd:COG4942 82 EAELAELEKEIAELRAELEAQ---KEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRAD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 508 LalrvQEVAELRRRLESNKPAGDvdmslSLLQEISSLQEKLEVTRTDHQREITSLKehfgAREETHQKEIKALYTATEKL 587
Cdd:COG4942 159 L----AELAALRAELEAERAELE-----ALLAELEEERAALEALKAERQKLLARLE----KELAELAAELAELQQEAEEL 225
|
250
....*....|....*..
gi 4506751 588 SKENESLKSKLEHANKE 604
Cdd:COG4942 226 EALIARLEAEAAAAAER 242
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
766-979 |
1.80e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 49.24 E-value: 1.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 766 DALRKASSEGKSEMKKLRQQLEAAEKQIKHLeieknAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQIL 845
Cdd:COG3206 171 EEARKALEFLEEQLPELRKELEEAEAALEEF-----RQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAAL 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 846 KEKFAEASEEAVSVQRS--MQETVNKLHQKEEQFNMLSS-------DLEKLRENLADMEAKFREKDEREEQLIKAK-EKL 915
Cdd:COG3206 246 RAQLGSGPDALPELLQSpvIQQLRAQLAELEAELAELSArytpnhpDVIALRAQIAALRAQLQQEAQRILASLEAElEAL 325
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 4506751 916 ENDIAEIMKMSGDNSSQLTKMNDelrlKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQ 979
Cdd:COG3206 326 QAREASLQAQLAQLEARLAELPE----LEAELRRLEREVEVARELYESLLQRLEEARLAEALTV 385
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
355-799 |
1.94e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.00 E-value: 1.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 355 EALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHvlELEAKMDQLRTMVEAADREKVELLNQLEEE 434
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLL--PLYQELEALEAELAELPERLEELEERLEEL 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 435 KRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMElEKDLALRVQE 514
Cdd:COG4717 159 RELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEE-ELEQLENELE 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 515 VAELRRRLESNKPAGDVDMSLSLLQEISSLQEKLEVTRTDHQREITSL----KEHFGAREETHQKEIKALYTATEKLSKE 590
Cdd:COG4717 238 AAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLlallFLLLAREKASLGKEAEELQALPALEELE 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 591 NESLKSKLEHANKENSDVIALWKSKLETaIASHQQAMEELkvsfskglgtetaefAELKTQIEkmRLDYQHEIENLQNQq 670
Cdd:COG4717 318 EEELEELLAALGLPPDLSPEELLELLDR-IEELQELLREA---------------EELEEELQ--LEELEQEIAALLAE- 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 671 dseraAHAKEMEALRAKLMKviKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKvKELEVLQAKCNEQTKVIDN 750
Cdd:COG4717 379 -----AGVEDEEELRAALEQ--AEEYQELKEELEELEEQLEELLGELEELLEALDEEELE-EELEELEEELEELEEELEE 450
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 4506751 751 FTSQLKATEEKLLDLdalrkassEGKSEMKKLRQQLEAAEKQIKHLEIE 799
Cdd:COG4717 451 LREELAELEAELEQL--------EEDGELAELLQELEELKAELRELAEE 491
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
680-965 |
3.08e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 48.58 E-value: 3.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 680 EMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDtlNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATE 759
Cdd:pfam17380 267 ENEFLNQLLHIVQHQKAVSERQQQEKFEKMEQERLRQEKE--EKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAM 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 760 EKLLDLDALRKasSEGKSEMKKLRQQLEAAE-KQIKHLEIEKNAESSKASSITRELQG-RELKLT------NLQENLSEV 831
Cdd:pfam17380 345 ERERELERIRQ--EERKRELERIRQEEIAMEiSRMRELERLQMERQQKNERVRQELEAaRKVKILeeerqrKIQQQKVEM 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 832 SQVK----ETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFR-----EKD 902
Cdd:pfam17380 423 EQIRaeqeEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRkilekELE 502
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 4506751 903 EREEQLIKAKEK---LENDIAEimKMSGDNSSQLTKMNDELRLKERDVEE---LQLKLTKANENASFLQ 965
Cdd:pfam17380 503 ERKQAMIEEERKrklLEKEMEE--RQKAIYEEERRREAEEERRKQQEMEErrrIQEQMRKATEERSRLE 569
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
868-1338 |
3.28e-05 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 48.58 E-value: 3.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 868 NKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDV 947
Cdd:pfam05557 16 NEKKQMELEHKRARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEALNKKLNEK 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 948 EElqlKLTKANENASFLQKSIEDMTVKAEQSQQeaakkheeekkelerKLSDLEKKMETSHNQCQELKARYERAtsetkT 1027
Cdd:pfam05557 96 ES---QLADAREVISCLKNELSELRRQIQRAEL---------------ELQSTNSELEELQERLDLLKAKASEA-----E 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1028 KHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQadKAKAAQTAEdamqiMEQMTKEKTETLASLEDTKQTNAK 1107
Cdd:pfam05557 153 QLRQNLEKQQSSLAEAEQRIKELEFEIQSQEQDSEIVKNS--KSELARIPE-----LEKELERLREHNKHLNENIENKLL 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1108 LQNELDTLKeNNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQK-------SQQLSALQEENVKLAEELG---- 1176
Cdd:pfam05557 226 LKEEVEDLK-RKLEREEKYREEAATLELEKEKLEQELQSWVKLAQDTGLNlrspedlSRRIEQLQQREIVLKEENSslts 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1177 RSRDEVTSHQKLEEERSVLNNQLLEMKKReskfIKDADEEKASLQKSISITSallTEKDAELEKLRNEVTVLRGENASAK 1256
Cdd:pfam05557 305 SARQLEKARRELEQELAQYLKKIEDLNKK----LKRHKALVRRLQRRVLLLT---KERDGYRAILESYDKELTMSNYSPQ 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1257 SLHSVvqtLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDE----RAQESQID--FLNSVIVDLQRKNQDLK 1330
Cdd:pfam05557 378 LLERI---EEAEDMTQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLERElqalRQQESLADpsYSKEEVDSLRRKLETLE 454
|
....*...
gi 4506751 1331 MKVEMMSE 1338
Cdd:pfam05557 455 LERQRLRE 462
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
469-1071 |
3.38e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.76 E-value: 3.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 469 LEQSLLFEKtkADKLQ---RELEDTRVATVSEKSRIMELE--KDLALRVQEVAELRRRLESNKPAGDVDMSLSLLQEISS 543
Cdd:COG4913 218 LEEPDTFEA--ADALVehfDDLERAHEALEDAREQIELLEpiRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 544 LQEKLEVTRTDHQREITSLKehfgAREETHQKEIKALYTATEKLSKEN-ESLKSKLEHANKEnsdvialwKSKLETAIAS 622
Cdd:COG4913 296 ELEELRAELARLEAELERLE----ARLDALREELDELEAQIRGNGGDRlEQLEREIERLERE--------LEERERRRAR 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 623 HQQAMEELKVSfskgLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAklmkviKEKE-NSLEA 701
Cdd:COG4913 364 LEALLAALGLP----LPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRE------LEAEiASLER 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 702 IRSKLdkaeDQHLVEMEDTLNklQEAEIKVKEL----EVLQAKCNEQ---------------------------TKVIDN 750
Cdd:COG4913 434 RKSNI----PARLLALRDALA--EALGLDEAELpfvgELIEVRPEEErwrgaiervlggfaltllvppehyaaaLRWVNR 507
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 751 --FTSQLKATEEKLLDLDALRKASSEG-----------------KSEMKKLR--------QQLEAAEK------QIKHLE 797
Cdd:COG4913 508 lhLRGRLVYERVRTGLPDPERPRLDPDslagkldfkphpfrawlEAELGRRFdyvcvdspEELRRHPRaitragQVKGNG 587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 798 I--EKNAESSKAS------SITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEAS--EEAVSVQRSMQETV 867
Cdd:COG4913 588 TrhEKDDRRRIRSryvlgfDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQrlAEYSWDEIDVASAE 667
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 868 NKLHQKEEQFNML---SSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKE 944
Cdd:COG4913 668 REIAELEAELERLdasSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLEL 747
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 945 RDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQeaakkheeekkeleRKLSDLEKKMETsHNQCQELKARYERATSE 1024
Cdd:COG4913 748 RALLEERFAAALGDAVERELRENLEERIDALRARLN--------------RAEEELERAMRA-FNREWPAETADLDADLE 812
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 4506751 1025 TKTKHEEILQNLQKT-LLDTEDKLKGAREENSGllQELEELRKQADKA 1071
Cdd:COG4913 813 SLPEYLALLDRLEEDgLPEYEERFKELLNENSI--EFVADLLSKLRRA 858
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
699-1330 |
3.93e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 48.30 E-value: 3.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 699 LEAIRSKLDKAEdQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLD--LDALRKASSEGK 776
Cdd:pfam12128 236 IMKIRPEFTKLQ-QEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKekRDELNGELSAAD 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 777 SEMKKLRQQLEAAEKQIKHLEiEKNAESSKASsitrelqgrelkltnlQENLSEVSQVKETLEKELQILKEKfaeaseea 856
Cdd:pfam12128 315 AAVAKDRSELEALEDQHGAFL-DADIETAAAD----------------QEQLPSWQSELENLEERLKALTGK-------- 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 857 vsvQRSMQETVNKLHQKEEQFNmlSSDLEKLRENLADM-EAKFREKDEREEQLikakEKLENDIAEIMKmsgdnsSQLTK 935
Cdd:pfam12128 370 ---HQDVTAKYNRRRSKIKEQN--NRDIAGIKDKLAKIrEARDRQLAVAEDDL----QALESELREQLE------AGKLE 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 936 MNDELRLKERDVEELQLKLTKAN-ENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQC--- 1011
Cdd:pfam12128 435 FNEEEYRLKSRLGELKLRLNQATaTPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQAsrr 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1012 -QELKARYERATSETKTKHEEILQNLQKTLLDTED----------------------------------KLKGAREENSG 1056
Cdd:pfam12128 515 lEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQsigkvispellhrtdldpevwdgsvggelnlygvKLDLKRIDVPE 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1057 LLQELEELRKQADKAKAA-QTAED-AMQIMEQMTKEKTET-LASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELL 1133
Cdd:pfam12128 595 WAASEEELRERLDKAEEAlQSAREkQAAAEEQLVQANGELeKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKALA 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1134 TVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERsvLNNQLLEMKKRESKFIKDA 1213
Cdd:pfam12128 675 ERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEGALDAQLAL--LKAAIAARRSGAKAELKAL 752
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1214 DEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQ-TLESDKVKLELKVKNLELQLKENKRQLSS 1292
Cdd:pfam12128 753 ETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQeTWLQRRPRLATQLSNIERAISELQQQLAR 832
|
650 660 670 680
....*....|....*....|....*....|....*....|....
gi 4506751 1293 SSGNTDTQADEDER------AQESQIDFLNSVIVDLQRKNQDLK 1330
Cdd:pfam12128 833 LIADTKLRRAKLEMerkaseKQQVRLSENLRGLRCEMSKLATLK 876
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
354-941 |
4.21e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 48.43 E-value: 4.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 354 QEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALardghDQHVLELEakmdQLRTMVEAADREKVELLNQLEE 433
Cdd:TIGR00618 337 QSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTL-----TQHIHTLQ----QQKTTLTQKLQSLCKELDILQR 407
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 434 EKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRVQ 513
Cdd:TIGR00618 408 EQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETR 487
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 514 EVAELRRRLESNKpagdvdmSLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENES 593
Cdd:TIGR00618 488 KKAVVLARLLELQ-------EEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRAS 560
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 594 LKSKLEHANKENSDVIALWKSkLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMrldyQHEIENLQNQQDSE 673
Cdd:TIGR00618 561 LKEQMQEIQQSFSILTQCDNR-SKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKL----QPEQDLQDVRLHLQ 635
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 674 RAAH--AKEMEALRAKLMKVIKEKEnSLEAIRSKLDKAEdqhlvemedtlnKLQEAEIKVKELEVLQAKCNEQTKVIDNF 751
Cdd:TIGR00618 636 QCSQelALKLTALHALQLTLTQERV-REHALSIRVLPKE------------LLASRQLALQKMQSEKEQLTYWKEMLAQC 702
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 752 TSQLKATEEKLLDLDALRKASSEGKSEMK-KLRQQLEAAEKQIKHLEiEKNAESSKASSITRELQGREL-----KLTNLQ 825
Cdd:TIGR00618 703 QTLLRELETHIEEYDREFNEIENASSSLGsDLAAREDALNQSLKELM-HQARTVLKARTEAHFNNNEEVtaalqTGAELS 781
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 826 ENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNmlsSDLEKLRENLADMEAKFREKDERE 905
Cdd:TIGR00618 782 HLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFL---SRLEEKSATLGEITHQLLKYEECS 858
|
570 580 590
....*....|....*....|....*....|....*.
gi 4506751 906 EQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELR 941
Cdd:TIGR00618 859 KQLAQLTQEQAKIIQLSDKLNGINQIKIQFDGDALI 894
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
764-1166 |
4.22e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 48.41 E-value: 4.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 764 DLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESS------KASSITRELQGRELKLTNLQENLSEVSQVKET 837
Cdd:COG3096 293 ELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASDhlnlvqTALRQQEKIERYQEDLEELTERLEEQEEVVEE 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 838 LEKELQILKEKFAEASEEAVSVQRSM---QETVNKLHQKEEQFNMLSSDLEKLR----------ENLADMEAKFREK-DE 903
Cdd:COG3096 373 AAEQLAEAEARLEAAEEEVDSLKSQLadyQQALDVQQTRAIQYQQAVQALEKARalcglpdltpENAEDYLAAFRAKeQQ 452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 904 REEQLIKAKEKLenDIAEIMKMSGDNSSQL-TKMNDElrlkerdVEELQlkltkANENASFLQKSIEDMTVKAEQSQQEA 982
Cdd:COG3096 453 ATEEVLELEQKL--SVADAARRQFEKAYELvCKIAGE-------VERSQ-----AWQTARELLRRYRSQQALAQRLQQLR 518
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 983 AKKheeekkelerklSDLEKKMEtSHNQCQELKARYERATSETKTKHEEI---LQNLQKTLLDTEDKLKGAREENSGLLQ 1059
Cdd:COG3096 519 AQL------------AELEQRLR-QQQNAERLLEEFCQRIGQQLDAAEELeelLAELEAQLEELEEQAAEAVEQRSELRQ 585
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1060 ELEELRKQ----ADKAKAAQTAEDAMQIMEQMTKEktetlaSLEDTKQTNAKLQNELDTLKennlknveELNKSKELLtv 1135
Cdd:COG3096 586 QLEQLRARikelAARAPAWLAAQDALERLREQSGE------ALADSQEVTAAMQQLLERER--------EATVERDEL-- 649
|
410 420 430
....*....|....*....|....*....|.
gi 4506751 1136 eNQKMEEFRKEIETLKQAAAQKSQQLSALQE 1166
Cdd:COG3096 650 -AARKQALESQIERLSQPGGAEDPRLLALAE 679
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
406-580 |
4.58e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.09 E-value: 4.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 406 LEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDlqFRVEEESItkgDLETQTKLEHARIKELEQSLL-------FEKT 478
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEE--FRQKNGLV---DLSEEAKLLLQQLSELESQLAearaelaEAEA 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 479 KADKLQRELEDTR--VATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPagDVdmsLSLLQEISSLQEKLEVTRTDHQ 556
Cdd:COG3206 241 RLAALRAQLGSGPdaLPELLQSPVIQQLRAQLAELEAELAELSARYTPNHP--DV---IALRAQIAALRAQLQQEAQRIL 315
|
170 180
....*....|....*....|....
gi 4506751 557 REITSLKEHFGAREETHQKEIKAL 580
Cdd:COG3206 316 ASLEAELEALQAREASLQAQLAQL 339
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
419-631 |
6.11e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 6.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 419 AADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEK 498
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 499 SRIMELEKDLALRVQEVAELRRR-----LESNKPAGDVDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEhfgareeth 573
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQpplalLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRA--------- 167
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 4506751 574 qkEIKALYTATEKLSKENESLKSKLEHANKENSDVIAlwksKLETAIASHQQAMEELK 631
Cdd:COG4942 168 --ELEAERAELEALLAELEEERAALEALKAERQKLLA----RLEKELAELAAELAELQ 219
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
1117-1363 |
6.54e-05 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 47.26 E-value: 6.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1117 ENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAA----AQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEER 1192
Cdd:COG5185 232 EEALKGFQDPESELEDLAQTSDKLEKLVEQNTDLRLEKlgenAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKAT 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1193 SVLNNQLLEMKKrESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKS---LHSVVQTLESDK 1269
Cdd:COG5185 312 ESLEEQLAAAEA-EQELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVELSKSseeLDSFKDTIESTK 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1270 VKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERaqesQIDFLNSVIVDLQRKNQDL-KMKVEMMSEAALNGNGDDL 1348
Cdd:COG5185 391 ESLDEIPQNQRGYAQEILATLEDTLKAADRQIEELQR----QIEQATSSNEEVSKLLNELiSELNKVMREADEESQSRLE 466
|
250
....*....|....*
gi 4506751 1349 NNYDSDDQEKQSKKK 1363
Cdd:COG5185 467 EAYDEINRSVRSKKE 481
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1064-1271 |
7.90e-05 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 47.08 E-value: 7.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1064 LRKQADKAKAAQTAEDAMQIMEQMTKE-KTETLASLEDTKQTNAKLQNELD---TLKENNLKNVEE--------LNKSKE 1131
Cdd:PRK12704 24 VRKKIAEAKIKEAEEEAKRILEEAKKEaEAIKKEALLEAKEEIHKLRNEFEkelRERRNELQKLEKrllqkeenLDRKLE 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1132 LLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEEL-GRSRDEVTshqkleeersvlnNQLLEMKKRESKfi 1210
Cdd:PRK12704 104 LLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERIsGLTAEEAK-------------EILLEKVEEEAR-- 168
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 4506751 1211 kdadEEKASLQKSIsitsalltEKDAELE--KLRNEVTVL---R--GENASAKSLhSVVqTLESDKVK 1271
Cdd:PRK12704 169 ----HEAAVLIKEI--------EEEAKEEadKKAKEILAQaiqRcaADHVAETTV-SVV-NLPNDEMK 222
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
643-1142 |
8.36e-05 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 47.04 E-value: 8.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 643 AEFAELKTQIEKMRLDY-QHEIENLQNQQDSERAAHA---------KEMEALRAKLMKVIKEKENSLEAIRSKLDKAEdQ 712
Cdd:pfam05557 2 AELIESKARLSQLQNEKkQMELEHKRARIELEKKASAlkrqldresDRNQELQKRIRLLEKREAEAEEALREQAELNR-L 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 713 HLVEMEDTLNKLQEAEIKVKELE----VLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEA 788
Cdd:pfam05557 81 KKKYLEALNKKLNEKESQLADARevisCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 789 -------AEKQIKHLEIEkNAESSKASSITRELQGRELKLTNLQ----------ENLSEVSQVKETLEKELQILK---EK 848
Cdd:pfam05557 161 qqsslaeAEQRIKELEFE-IQSQEQDSEIVKNSKSELARIPELEkelerlrehnKHLNENIENKLLLKEEVEDLKrklER 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 849 FAEASEEAVSVQRSMQETVNKLHQKEEQFNM----------LSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEND 918
Cdd:pfam05557 240 EEKYREEAATLELEKEKLEQELQSWVKLAQDtglnlrspedLSRRIEQLQQREIVLKEENSSLTSSARQLEKARRELEQE 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 919 IAEIMKmsgdnssQLTKMNDELRLKERDVEELQLKLTKANENASFLQ---KSIEDMTVKAEQSQQEAAKKHE-------- 987
Cdd:pfam05557 320 LAQYLK-------KIEDLNKKLKRHKALVRRLQRRVLLLTKERDGYRailESYDKELTMSNYSPQLLERIEEaedmtqkm 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 988 -EEKKELERKLSDLEKKMETSHNQCQ----ELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELE 1062
Cdd:pfam05557 393 qAHNEEMEAQLSVAEEELGGYKQQAQtlerELQALRQQESLADPSYSKEEVDSLRRKLETLELERQRLREQKNELEMELE 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1063 ELRKQAD----KAKAAQTAEDAMQIMEQMTKEKTETL-ASLEDTKQTNAKLQNELD-------TLKENNLKNVEELNKSK 1130
Cdd:pfam05557 473 RRCLQGDydpkKTKVLHLSMNPAAEAYQQRKNQLEKLqAEIERLKRLLKKLEDDLEqvlrlpeTTSTMNFKEVLDLRKEL 552
|
570
....*....|..
gi 4506751 1131 ELLTVENQKMEE 1142
Cdd:pfam05557 553 ESAELKNQRLKE 564
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
998-1177 |
9.86e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 9.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 998 SDLEKKMETSHNQCQELKARYERATSETKTKHEEI-------------LQNLQKTLLDTEDKLKGAREENSGLLQELEEL 1064
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLaalerriaalarrIRALEQELAALEAELAELEKEIAELRAELEAQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1065 RKQ-ADKAKAAQT------------------AEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEE 1125
Cdd:COG4942 103 KEElAELLRALYRlgrqpplalllspedfldAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAE 182
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 4506751 1126 LNKSKELLtveNQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGR 1177
Cdd:COG4942 183 LEEERAAL---EALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
337-1068 |
1.01e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 47.14 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 337 TETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLE----RAEVAKATSHVGEIE-QELALARDGHDQHVLELEaKMD 411
Cdd:pfam12128 272 TLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGElsaaDAAVAKDRSELEALEdQHGAFLDADIETAAADQE-QLP 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 412 QLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITK--GDLETQTKLEHARIKELEQsllfEKTKADKLQRELED 489
Cdd:pfam12128 351 SWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDiaGIKDKLAKIREARDRQLAV----AEDDLQALESELRE 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 490 TRVAtvsEKSRIMELEKDLALRVqevAELRRRLESNKPAGDVDMSLSLLQE-ISSLQEKLE---VTRTDHQREITSLKEH 565
Cdd:pfam12128 427 QLEA---GKLEFNEEEYRLKSRL---GELKLRLNQATATPELLLQLENFDErIERAREEQEaanAEVERLQSELRQARKR 500
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 566 FGAREETHQKEIKALYTATEKLSKENESLKSK----LEHANKEnsdvIALWKSKLETAIASHQQAMEELKVSFSKGLGTE 641
Cdd:pfam12128 501 RDQASEALRQASRRLEERQSALDELELQLFPQagtlLHFLRKE----APDWEQSIGKVISPELLHRTDLDPEVWDGSVGG 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 642 TAEFAELKTQIEKMRLDYQHEIENlqnQQDSERAAHAKEMEALRAKlmkvIKEKENSLEAIRSKLDKAEdqhlVEMEDTL 721
Cdd:pfam12128 577 ELNLYGVKLDLKRIDVPEWAASEE---ELRERLDKAEEALQSAREK----QAAAEEQLVQANGELEKAS----REETFAR 645
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 722 NKLQEAEIKVKELEVLQAkcNEQTKVIDNFTSQLKATEEKLLDLDAlrkassegksEMKKLRQQLEAAEKQIKHleiekn 801
Cdd:pfam12128 646 TALKNARLDLRRLFDEKQ--SEKDKKNKALAERKDSANERLNSLEA----------QLKQLDKKHQAWLEEQKE------ 707
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 802 aesskassitrelQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLS 881
Cdd:pfam12128 708 -------------QKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLK 774
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 882 SDLEKLRENLADMeAKFREKDEREEQLIKAKEKLENDiaeimkmsgdnssqltKMNDELRLKERDVEELQLKLTKANENA 961
Cdd:pfam12128 775 REIRTLERKIERI-AVRRQEVLRYFDWYQETWLQRRP----------------RLATQLSNIERAISELQQQLARLIADT 837
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 962 SFLQKSIEdMTVKAEQSQQEAAKKHEEEKKELERKLSDLekKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLL 1041
Cdd:pfam12128 838 KLRRAKLE-MERKASEKQQVRLSENLRGLRCEMSKLATL--KEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKKYVE 914
|
730 740
....*....|....*....|....*..
gi 4506751 1042 DteDKLKGAREENSGLLQELEELRKQA 1068
Cdd:pfam12128 915 H--FKNVIADHSGSGLAETWESLREED 939
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
780-941 |
1.04e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 46.69 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 780 KKLRQQLEAAEKQIKHL--EIEKNAESSKassitrelqgrELKLTNLQEnlsEVSQVKETLEKELqilKEKFAEaseeav 857
Cdd:PRK12704 27 KIAEAKIKEAEEEAKRIleEAKKEAEAIK-----------KEALLEAKE---EIHKLRNEFEKEL---RERRNE------ 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 858 svqrsMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREK----DEREEQLIKAKEKLENDIAEIMKMSGDNSSQ- 932
Cdd:PRK12704 84 -----LQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKqqelEKKEEELEELIEEQLQELERISGLTAEEAKEi 158
|
170
....*....|
gi 4506751 933 -LTKMNDELR 941
Cdd:PRK12704 159 lLEKVEEEAR 168
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
1365-1382 |
1.24e-04 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 40.14 E-value: 1.24e-04
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
659-1173 |
1.86e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 46.05 E-value: 1.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 659 YQHEIENLQNQQDSERAAHA---KEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEME--DTLNKLQEAEIKVKE 733
Cdd:PRK01156 195 SNLELENIKKQIADDEKSHSitlKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEikTAESDLSMELEKNNY 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 734 LEVLQAKCNEQTkvidnfTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEieknaESSKASSITRE 813
Cdd:PRK01156 275 YKELEERHMKII------NDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKYHAIIKKLS-----VLQKDYNDYIK 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 814 LQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEavsVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLAD 893
Cdd:PRK01156 344 KKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKN---IERMSAFISEILKIQEIDPDAIKKELNEINVKLQD 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 894 MEAKFREKDEREEQLIKAKEKLENDiAEIMKMSGDNSSQLTKMNDELrlKERDVEELQLKLTKANENASFLQKSIEDMTV 973
Cdd:PRK01156 421 ISSKVSSLNQRIRALRENLDELSRN-MEMLNGQSVCPVCGTTLGEEK--SNHIINHYNEKKSRLEEKIREIEIEVKDIDE 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 974 KAEQSQQEAAKKHEEEKkelerklsdleKKMETSHNQCQELKARYERatsetktkheeiLQNLQKTLLDTEDKLKGAREE 1053
Cdd:PRK01156 498 KIVDLKKRKEYLESEEI-----------NKSINEYNKIESARADLED------------IKIKINELKDKHDKYEEIKNR 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1054 -NSGLLQELEELRKQADKAKAAQTAEDAMQIMEQmTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEE----LNK 1128
Cdd:PRK01156 555 yKSLKLEDLDSKRTSWLNALAVISLIDIETNRSR-SNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENeannLNN 633
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 4506751 1129 SKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAE 1173
Cdd:PRK01156 634 KYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRIND 678
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1028-1218 |
2.15e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 45.69 E-value: 2.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1028 KHEEILQNLQKtLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQImEQMTKEKTETLASLEDTKQtnaK 1107
Cdd:PRK05771 44 RLRKLRSLLTK-LSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKI-EKEIKELEEEISELENEIK---E 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1108 LQNELDTLK-----------------------------------ENNLKNVEELNKSKE----LLTVENQKMEEFRKEIE 1148
Cdd:PRK05771 119 LEQEIERLEpwgnfdldlslllgfkyvsvfvgtvpedkleelklESDVENVEYISTDKGyvyvVVVVLKELSDEVEEELK 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1149 -------------TLKQAAAQKSQQLSALQEENVKLAEELGRSRdevtshQKLEEERSVLNNQLLEMKKRESKFIKDADE 1215
Cdd:PRK05771 199 klgferleleeegTPSELIREIKEELEEIEKERESLLEELKELA------KKYLEELLALYEYLEIELERAEALSKFLKT 272
|
...
gi 4506751 1216 EKA 1218
Cdd:PRK05771 273 DKT 275
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
880-1237 |
2.35e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 45.73 E-value: 2.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 880 LSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANE 959
Cdd:pfam02463 147 IAMMKPERRLEIEEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYL 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 960 NASFLQKSIEdmtvKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQcQELKARYERATSETKTKHEEILQNLQKT 1039
Cdd:pfam02463 227 LYLDYLKLNE----ERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKE-NKEEEKEKKLQEEELKLLAKEEEELKSE 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1040 LLDTEDKLKGAREENSGLLQELEELRKQADKAKaaQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENN 1119
Cdd:pfam02463 302 LLKLERRKVDDEEKLKESEKEKKKAEKELKKEK--EEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKK 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1120 LKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQL 1199
Cdd:pfam02463 380 KLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELK 459
|
330 340 350
....*....|....*....|....*....|....*...
gi 4506751 1200 LEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAE 1237
Cdd:pfam02463 460 LLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEE 497
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
647-886 |
2.43e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.39 E-value: 2.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 647 ELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALrAKLMKVIKEKENSLEAIRSKLDKAEDQ---HLVEMEDT--- 720
Cdd:PHA02562 178 ELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENI-ARKQNKYDELVEEAKTIKAEIEELTDEllnLVMDIEDPsaa 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 721 LNKLQEAEIKVK-ELEVLQ--AKCNEQTKVIDNFTSQLKATEEKLldldalrkasSEGKSEMKKLRQQLEAAEKQIKHLE 797
Cdd:PHA02562 257 LNKLNTAAAKIKsKIEQFQkvIKMYEKGGVCPTCTQQISEGPDRI----------TKIKDKLKELQHSLEKLDTAIDELE 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 798 iEKNAESSKASSITRELQGrelKLTNLQENLS-EVSQVKEtLEKELQILKEKFAEASEEAVSVQRSMQETVNKL--HQKE 874
Cdd:PHA02562 327 -EIMDEFNEQSKKLLELKN---KISTNKQSLItLVDKAKK-VKAAIEELQAEFVDNAEELAKLQDELDKIVKTKseLVKE 401
|
250
....*....|..
gi 4506751 875 EQFNMLSSDLEK 886
Cdd:PHA02562 402 KYHRGIVTDLLK 413
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
485-921 |
2.54e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.53 E-value: 2.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 485 RELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLEsnkpagdvdmslSLLQEISSLQEKLEVTRTDHQR-EITSLK 563
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELE------------ELREELEKLEKLLQLLPLYQELeALEAEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 564 EHFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKvsfskglgTETA 643
Cdd:COG4717 142 AELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLA--------ELEE 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 644 EFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAI--------------------- 702
Cdd:COG4717 214 ELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLIltiagvlflvlgllallflll 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 703 -RSKLDKAEDQHLVEMEDTLNKLQEAEIKvKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKassegksemkk 781
Cdd:COG4717 294 aREKASLGKEAEELQALPALEELEEEELE-ELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEE----------- 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 782 lRQQLEAAEKQIKHLEIEKNAESSKassitrELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSvqr 861
Cdd:COG4717 362 -ELQLEELEQEIAALLAEAGVEDEE------ELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELE--- 431
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 4506751 862 smqetvNKLHQKEEQFNMLSSDLEKLRENLADMEAKFR--EKDEREEQLIKAKEKLENDIAE 921
Cdd:COG4717 432 ------EELEELEEELEELEEELEELREELAELEAELEqlEEDGELAELLQELEELKAELRE 487
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
652-1131 |
2.66e-04 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 45.58 E-value: 2.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 652 IEKMRLDYQHEIENLQNQQD---SERAAHAKEMEALR--AKLMKV--------IKEKENSLEAIRSKLDKAEDQ------ 712
Cdd:pfam10174 245 LERNIRDLEDEVQMLKTNGLlhtEDREEEIKQMEVYKshSKFMKNkidqlkqeLSKKESELLALQTKLETLTNQnsdckq 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 713 HLVEMEDTLN-KLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLK-ATEEKlldldalrkasSEGKSEMKKLRQQLEAAE 790
Cdd:pfam10174 325 HIEVLKESLTaKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQdLTEEK-----------STLAGEIRDLKDMLDVKE 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 791 KQIKHLEieknaesSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASE--EAVSVQRSMQEtvn 868
Cdd:pfam10174 394 RKINVLQ-------KKIENLQEQLRDKDKQLAGLKERVKSLQTDSSNTDTALTTLEEALSEKERiiERLKEQRERED--- 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 869 klHQKEEQFNMLSSDLEKLRENLADMEakfREKDEREEQLIKAKEKLENDIAEIMKmsgdNSSQLTKMNDELRLKERDVE 948
Cdd:pfam10174 464 --RERLEELESLKKENKDLKEKVSALQ---PELTEKESSLIDLKEHASSLASSGLK----KDSKLKSLEIAVEQKKEECS 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 949 ELQLKLTKANENASFLQKSiEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLE--KKMETSHNQCQELKARYERATSETK 1026
Cdd:pfam10174 535 KLENQLKKAHNAEEAVRTN-PEINDRIRLLEQEVARYKEESGKAQAEVERLLGilREVENEKNDKDKKIAELESLTLRQM 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1027 TKHEEILQNLQktLLDTEDKLKGAreensGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNA 1106
Cdd:pfam10174 614 KEQNKKVANIK--HGQQEMKKKGA-----QLLEEARRREDNLADNSQQLQLEELMGALEKTRQELDATKARLSSTQQSLA 686
|
490 500
....*....|....*....|....*
gi 4506751 1107 KLQNELDTLKENNLKNVEELNKSKE 1131
Cdd:pfam10174 687 EKDGHLTNLRAERRKQLEEILEMKQ 711
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
538-950 |
3.01e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.14 E-value: 3.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 538 LQEISSLQEKLEVTRTDHQ--REITSLKEHFGAREETHQKEIKALYTATEKLSK--ENESLKSKLEHANKENSDVIALWK 613
Cdd:COG4717 70 LKELKELEEELKEAEEKEEeyAELQEELEELEEELEELEAELEELREELEKLEKllQLLPLYQELEALEAELAELPERLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 614 sKLETAIASHQQAMEELKvsfskglgTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLmkviK 693
Cdd:COG4717 150 -ELEERLEELRELEEELE--------ELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEEL----E 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 694 EKENSLEAIRSKLDKAEDQHlvEMEDTLNKLQEAEIKVK---ELEVLQAKCNEQTKVIDNFTSQLKATEEkLLDLDALRK 770
Cdd:COG4717 217 EAQEELEELEEELEQLENEL--EAAALEERLKEARLLLLiaaALLALLGLGGSLLSLILTIAGVLFLVLG-LLALLFLLL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 771 ASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGREL--KLTNLQENLSEVSQVKETL-----EKELQ 843
Cdd:COG4717 294 AREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELldRIEELQELLREAEELEEELqleelEQEIA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 844 ILKEKFAEASEEA----VSVQRSMQETVNKLHQKEEQFN---------MLSSDLEKLRENLADMEAKFREKDEREEQLIK 910
Cdd:COG4717 374 ALLAEAGVEDEEElraaLEQAEEYQELKEELEELEEQLEellgeleelLEALDEEELEEELEELEEELEELEEELEELRE 453
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 4506751 911 AKEKLENDIAEIMkmsgdNSSQLTKMNDELRLKERDVEEL 950
Cdd:COG4717 454 ELAELEAELEQLE-----EDGELAELLQELEELKAELREL 488
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
889-1266 |
3.22e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.14 E-value: 3.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 889 ENLADMEAKFREKDEREEQLIKAKEKLENDIAEImkmsgdnssqltkmnDELRLKERDVEELQLKLTKANENASFLQKSI 968
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEEL---------------EELEAELEELREELEKLEKLLQLLPLYQELE 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 969 E-DMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKL 1047
Cdd:COG4717 136 AlEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEEL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1048 KGAREENSGLLQELEELRKQADKAKAAQTAEDAMQI--------------------------------------MEQMTK 1089
Cdd:COG4717 216 EEAQEELEELEEELEQLENELEAAALEERLKEARLLlliaaallallglggsllsliltiagvlflvlgllallFLLLAR 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1090 EKTETLASLEDTKQ-------TNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQlS 1162
Cdd:COG4717 296 EKASLGKEAEELQAlpaleelEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIA-A 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1163 ALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEkaSLQKSISITSALLTEKDAELEKLR 1242
Cdd:COG4717 375 LLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEE--ELEEELEELEEELEELEEELEELR 452
|
410 420
....*....|....*....|....
gi 4506751 1243 NEVTVLRGENASAKSLHSVVQTLE 1266
Cdd:COG4717 453 EELAELEAELEQLEEDGELAELLQ 476
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
479-945 |
4.29e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.95 E-value: 4.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 479 KADKLQRELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPagdvdmSLSLLQEISSLQEKLEvtrtdhqRE 558
Cdd:PRK04863 287 EALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASD------HLNLVQTALRQQEKIE-------RY 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 559 ITSLKEHFGAREEthQKEIKALytATEKLskenESLKSKLEHANKENSDvialwkskLETAIASHQQAMEELkvsfskgl 638
Cdd:PRK04863 354 QADLEELEERLEE--QNEVVEE--ADEQQ----EENEARAEAAEEEVDE--------LKSQLADYQQALDVQ-------- 409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 639 gtetaefaelktqiEKMRLDYQHEIENLQ-----NQQDSERAAHAKEM-EALRAKLmkviKEKENSLEAIRSKLDKAEDq 712
Cdd:PRK04863 410 --------------QTRAIQYQQAVQALErakqlCGLPDLTADNAEDWlEEFQAKE----QEATEELLSLEQKLSVAQA- 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 713 HLVEMEDTLNKLQEAeikVKELEVLQAKcneqtkviDNFTSQLK-ATEEKLLD--LDALRKasseGKSEMKKLRQQLEAA 789
Cdd:PRK04863 471 AHSQFEQAYQLVRKI---AGEVSRSEAW--------DVARELLRrLREQRHLAeqLQQLRM----RLSELEQRLRQQQRA 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 790 EKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAvSVQRSMQETVNK 869
Cdd:PRK04863 536 ERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARA-PAWLAAQDALAR 614
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 4506751 870 L--HQKEEQFNmlSSDLEKLRENLADMEAKFR-EKDEREEQlikaKEKLEndiAEIMKMSGDNSSQLTKMNdelRLKER 945
Cdd:PRK04863 615 LreQSGEEFED--SQDVTEYMQQLLERERELTvERDELAAR----KQALD---EEIERLSQPGGSEDPRLN---ALAER 681
|
|
| PRK11637 |
PRK11637 |
AmiB activator; Provisional |
713-914 |
4.68e-04 |
|
AmiB activator; Provisional
Pssm-ID: 236942 [Multi-domain] Cd Length: 428 Bit Score: 44.30 E-value: 4.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 713 HLVEMEDTLNKLQeAEIKVKELEV---------LQAKCNEQTKVIDNFTSQLKATEEKLLDLD--------ALRKASSEG 775
Cdd:PRK11637 41 HASDNRDQLKSIQ-QDIAAKEKSVrqqqqqrasLLAQLKKQEEAISQASRKLRETQNTLNQLNkqidelnaSIAKLEQQQ 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 776 KSEMKKLRQQLEAAEKQIKH--LEIEKNAESSKASSitREL-------QGRELKLTNLQENLSEVSQVKETLE----KEL 842
Cdd:PRK11637 120 AAQERLLAAQLDAAFRQGEHtgLQLILSGEESQRGE--RILayfgylnQARQETIAELKQTREELAAQKAELEekqsQQK 197
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 4506751 843 QILKEKFAEAS--EEAVSV-QRSMQETVNKLHQKEEQFNMLSSDLEKLRENL--ADMEAKFR-EKDEREEQLIKAKEK 914
Cdd:PRK11637 198 TLLYEQQAQQQklEQARNErKKTLTGLESSLQKDQQQLSELRANESRLRDSIarAEREAKARaEREAREAARVRDKQK 275
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1096-1343 |
5.49e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 5.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1096 ASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLaeel 1175
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAEL---- 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1176 grsrdevtsHQKLEEERSVLNNQLLEMKKRES----KFIKDADEEKASLqKSISITSALLTEKDAELEKLRNEVTVLRge 1251
Cdd:COG4942 96 ---------RAELEAQKEELAELLRALYRLGRqpplALLLSPEDFLDAV-RRLQYLKYLAPARREQAEELRADLAELA-- 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1252 nASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQIDfLNSVIVDLQRKNQDLKM 1331
Cdd:COG4942 164 -ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEE-LEALIARLEAEAAAAAE 241
|
250
....*....|..
gi 4506751 1332 KVEMMSEAALNG 1343
Cdd:COG4942 242 RTPAAGFAALKG 253
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1050-1315 |
6.19e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 44.52 E-value: 6.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1050 AREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKS 1129
Cdd:PRK11281 27 ARAASNGDLPTEADVQAQLDALNKQKLLEAEDKLVQQDLEQTLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEAL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1130 KElltvENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSrdeVTSHQKLEEERSVLNNQLLEMKKRESKF 1209
Cdd:PRK11281 107 KD----DNDEETRETLSTLSLRQLESRLAQTLDQLQNAQNDLAEYNSQL---VSLQTQPERAQAALYANSQRLQQIRNLL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1210 IKDADEEKA---SLQKSISITSALLtekDAELEKLRNEvtvLRGenasakslHSVVQTLESDKVKL-ELKVKNLELQLKE 1285
Cdd:PRK11281 180 KGGKVGGKAlrpSQRVLLQAEQALL---NAQNDLQRKS---LEG--------NTQLQDLLQKQRDYlTARIQRLEHQLQL 245
|
250 260 270
....*....|....*....|....*....|....*
gi 4506751 1286 -----NKRQLSSSSgNTDTQADEDERAQESQIDFL 1315
Cdd:PRK11281 246 lqeaiNSKRLTLSE-KTVQEAQSQDEAARIQANPL 279
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
765-921 |
6.99e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.99 E-value: 6.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 765 LDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKE-------- 836
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEyealqkei 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 837 -TLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnmlssdlekLRENLADMEAKFREKDEREEQLIKAKEKL 915
Cdd:COG1579 99 eSLKRRISDLEDEILELMERIEELEEELAELEAELAELEAE----------LEEKKAELDEELAELEAELEELEAEREEL 168
|
....*.
gi 4506751 916 ENDIAE 921
Cdd:COG1579 169 AAKIPP 174
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
785-980 |
7.03e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.67 E-value: 7.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 785 QLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQ 864
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 865 ET-------------------------VNKLHQKE-EQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEND 918
Cdd:COG3883 97 RSggsvsyldvllgsesfsdfldrlsaLSKIADADaDLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQ 176
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 4506751 919 IAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQ 980
Cdd:COG3883 177 QAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 238
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
836-954 |
7.13e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 44.08 E-value: 7.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 836 ETLEKELQILKEKfaEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDER----EEQLIKA 911
Cdd:COG2433 376 LSIEEALEELIEK--ELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERierlERELSEA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 4506751 912 KEKLENDI---AEIMKMSGDNsSQLTKmndELRLKERDVEELQLKL 954
Cdd:COG2433 454 RSEERREIrkdREISRLDREI-ERLER---ELEEERERIEELKRKL 495
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
638-853 |
7.91e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 7.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 638 LGTETAEFAELKTQIEKMRLDYQHEIENLQ---NQQDSERAAHAKEMEALRAKLMKV---IKEKENSLEAIRSKLDKAED 711
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEkelAALKKEEKALLKQLAALERRIAALarrIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 712 QhLVEMEDTLNKLQEAeikVKELEVLQAKCNEQTKV------------------IDNFTSQLKATEEKL-LDLDALRKAS 772
Cdd:COG4942 91 E-IAELRAELEAQKEE---LAELLRALYRLGRQPPLalllspedfldavrrlqyLKYLAPARREQAEELrADLAELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 773 SEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEA 852
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
.
gi 4506751 853 S 853
Cdd:COG4942 247 G 247
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
998-1184 |
8.88e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.28 E-value: 8.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 998 SDLEKKMETSHNQCQELKARYERATSETKTKHEEIlQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADK------A 1071
Cdd:COG3883 33 EAAQAELDALQAELEELNEEYNELQAELEALQAEI-DKLQAEIAEAEAEIEERREELGERARALYRSGGSVSYldvllgS 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1072 KAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLtveNQKMEEFRKEIETLK 1151
Cdd:COG3883 112 ESFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAEL---EAQQAEQEALLAQLS 188
|
170 180 190
....*....|....*....|....*....|...
gi 4506751 1152 QAAAQKSQQLSALQEENVKLAEELGRSRDEVTS 1184
Cdd:COG3883 189 AEEAAAEAQLAELEAELAAAEAAAAAAAAAAAA 221
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
784-1336 |
1.05e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 43.74 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 784 QQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVsvqrSM 863
Cdd:PRK01156 162 NSLERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYN----NL 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 864 QETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKE--------------KLENDIAEIMKMSGDN 929
Cdd:PRK01156 238 KSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIINdpvyknrnyindyfKYKNDIENKKQILSNI 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 930 SSQLTKMNDELRlKERDVEELQLKLTKANENASFLQKSIEDMtvkaeQSQQEAAKKHEEEKKELERKLSDLEKKMETSHN 1009
Cdd:PRK01156 318 DAEINKYHAIIK-KLSVLQKDYNDYIKKKSRYDDLNNQILEL-----EGYEMDYNSYLKSIESLKKKIEEYSKNIERMSA 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1010 QCQELKARYERATSETKTKHEEILQNLQktllDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTA---------EDA 1080
Cdd:PRK01156 392 FISEILKIQEIDPDAIKKELNEINVKLQ----DISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCpvcgttlgeEKS 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1081 MQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKennlKNVEELNKSK-ELLTVENQKMEEFRKEIETLKQAAAQ-KS 1158
Cdd:PRK01156 468 NHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLK----KRKEYLESEEiNKSINEYNKIESARADLEDIKIKINElKD 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1159 QQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRE-SKFIKDADEEKASLQKSI----SITSALLTE 1233
Cdd:PRK01156 544 KHDKYEEIKNRYKSLKLEDLDSKRTSWLNALAVISLIDIETNRSRSNEiKKQLNDLESRLQEIEIGFpddkSYIDKSIRE 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1234 KDAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKL---ELKVKNLELQLKENKRQLSSSSGNTDtQADEDERAQES 1310
Cdd:PRK01156 624 IENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIAEIdsiIPDLKEITSRINDIEDNLKKSRKALD-DAKANRARLES 702
|
570 580
....*....|....*....|....*.
gi 4506751 1311 QIDFLNSVIVDLQRKNQDLKMKVEMM 1336
Cdd:PRK01156 703 TIEILRTRINELSDRINDINETLESM 728
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
375-580 |
1.07e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.79 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 375 RAEVAKATSHVGEIEQELALARDGHDQHvlelEAKMDQLRTMV-----EAADREKVELLNQLEEEKRKVEDLQFRVEEES 449
Cdd:PRK04863 448 QAKEQEATEELLSLEQKLSVAQAAHSQF----EQAYQLVRKIAgevsrSEAWDVARELLRRLREQRHLAEQLQQLRMRLS 523
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 450 ITKGDLETQTKLEHARiKELEQSLLFEKTKADKLQRELED--TRVATVSE-KSRIMELEKDLALRVQEVAELRRRLESNK 526
Cdd:PRK04863 524 ELEQRLRQQQRAERLL-AEFCKRLGKNLDDEDELEQLQEEleARLESLSEsVSEARERRMALRQQLEQLQARIQRLAARA 602
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 4506751 527 PAG-DVDMSLSLLQEISS------------LQEKLEvtrtdHQREITSLKEHFGAREETHQKEIKAL 580
Cdd:PRK04863 603 PAWlAAQDALARLREQSGeefedsqdvteyMQQLLE-----RERELTVERDELAARKQALDEEIERL 664
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
512-890 |
1.15e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 43.89 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 512 VQEVAELRRRLESNKP--AGDVDMSLSLLQEI---SSLQE---KLEVTRTDHQ-----REITSLKEHFGAREETHQKeik 578
Cdd:TIGR01612 1364 IDEVKEYTKEIEENNKniKDELDKSEKLIKKIkddINLEEcksKIESTLDDKDideciKKIKELKNHILSEESNIDT--- 1440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 579 alYTATEKLSKENESLKSK-LEHANKENSDVIalwKSKLETAIASHQQAMEELKVSFSKGLGTETaEFAELKTQIEKMRL 657
Cdd:TIGR01612 1441 --YFKNADENNENVLLLFKnIEMADNKSQHIL---KIKKDNATNDHDFNINELKEHIDKSKGCKD-EADKNAKAIEKNKE 1514
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 658 DYQheienlQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRskldKAEDQHLVEMEDTLNKLQEAEIKVKELEVL 737
Cdd:TIGR01612 1515 LFE------QYKKDVTELLNKYSALAIKNKFAKTKKDSEIIIKEIK----DAHKKFILEAEKSEQKIKEIKKEKFRIEDD 1584
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 738 QAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKA-----SSITR 812
Cdd:TIGR01612 1585 AAKNDKSNKAAIDIQLSLENFENKFLKISDIKKKINDCLKETESIEKKISSFSIDSQDTELKENGDNLNSlqeflESLKD 1664
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 813 ELQGRELKLTNLQENLSEVSQVKETLEKE--------LQILKEKFAEASEEAVSVQRSMQETVNKLhqkEEQFNmlSSDL 884
Cdd:TIGR01612 1665 QKKNIEDKKKELDELDSEIEKIEIDVDQHkknyeigiIEKIKEIAIANKEEIESIKELIEPTIENL---ISSFN--TNDL 1739
|
....*.
gi 4506751 885 EKLREN 890
Cdd:TIGR01612 1740 EGIDPN 1745
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
692-896 |
1.25e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 692 IKEKENSLEAIRSKLDKAEDQhlvemedtLNKLQEAEIKV-KELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRK 770
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKE--------LAALKKEEKALlKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 771 ASSEGKSEMKK-LRQQLEAAEK--QIKHLEIEKNAESSKASSITREL-----QGRELKLTNLQENLSEVSQVKETLE--- 839
Cdd:COG4942 94 ELRAELEAQKEeLAELLRALYRlgRQPPLALLLSPEDFLDAVRRLQYlkylaPARREQAEELRADLAELAALRAELEaer 173
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 4506751 840 --------------KELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEA 896
Cdd:COG4942 174 aeleallaeleeerAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
356-520 |
1.26e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.31 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 356 ALKEKQQHIEQLLAE---RDLERAEVAKATS-----------HVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAAD 421
Cdd:COG2433 347 AYKNKFERVEKKVPPdvdRDEVKARVIRGLSieealeeliekELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLE 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 422 REKVELLNQLEEEKRKVEDLQFRVEEESI-TKGDLETQTKLEH--ARIKELEQSLLFEKTKADKLQRELEDTRvatvsek 498
Cdd:COG2433 427 AEVEELEAELEEKDERIERLERELSEARSeERREIRKDREISRldREIERLERELEEERERIEELKRKLERLK------- 499
|
170 180
....*....|....*....|...
gi 4506751 499 sRIMELE-KDLALRVQEVAELRR 520
Cdd:COG2433 500 -ELWKLEhSGELVPVKVVEKFTK 521
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
653-859 |
1.43e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.92 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 653 EKMRLDYQHEIENlqnqqDSERAAHAKEMEALRAklmkvIKEKENSLEAirskldKAEDQHLVEM-----------EDTL 721
Cdd:COG2433 319 EKLHLAREYGYDN-----DHERDALAAALKAYDA-----YKNKFERVEK------KVPPDVDRDEvkarvirglsiEEAL 382
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 722 NKLQEAEIKVKELEVLQAKCNEQTkvidnftsQLKATEEKLLDLDALRKassEGKSEMKKLRQQLEAAEKQIKHLEIEKN 801
Cdd:COG2433 383 EELIEKELPEEEPEAEREKEHEER--------ELTEEEEEIRRLEEQVE---RLEAEVEELEAELEEKDERIERLERELS 451
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 4506751 802 AESSKASS---ITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKE-KFAEASEEAVSV 859
Cdd:COG2433 452 EARSEERReirKDREISRLDREIERLERELEEERERIEELKRKLERLKElWKLEHSGELVPV 513
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
405-847 |
1.50e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.97 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 405 ELEAKMDQLRTMveaaDREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQ 484
Cdd:PRK01156 333 VLQKDYNDYIKK----KSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIK 408
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 485 RELEDTRVatvseksRIMELEKDLALRVQEVAELRRRLesnkpagdvdMSLSLLQEISSLQEKLEVTRTDHQRE-ITSLK 563
Cdd:PRK01156 409 KELNEINV-------KLQDISSKVSSLNQRIRALRENL----------DELSRNMEMLNGQSVCPVCGTTLGEEkSNHII 471
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 564 EHFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIAShqqaMEELKVSFSKgLGTETA 643
Cdd:PRK01156 472 NHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARAD----LEDIKIKINE-LKDKHD 546
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 644 EFAELKTQIEKMRLdyqheiENLQNQQDSERAAHAK----EMEALRAK---LMKVIKEKENSLEAIRSKLDKAE---DQH 713
Cdd:PRK01156 547 KYEEIKNRYKSLKL------EDLDSKRTSWLNALAVisliDIETNRSRsneIKKQLNDLESRLQEIEIGFPDDKsyiDKS 620
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 714 LVEMEDTLNKLQEaeiKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAekqi 793
Cdd:PRK01156 621 IREIENEANNLNN---KYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDA---- 693
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 4506751 794 khleiekNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKE 847
Cdd:PRK01156 694 -------KANRARLESTIEILRTRINELSDRINDINETLESMKKIKKAIGDLKR 740
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
960-1339 |
1.54e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 960 NASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKT 1039
Cdd:PTZ00121 1073 KPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAK 1152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1040 LLDTEDKLKGAREENSGLLQE----LEELRK--QADKAKAAQTAEDAMQIMEQMTKE---KTETLASLEDTKQTNAKLQN 1110
Cdd:PTZ00121 1153 RVEIARKAEDARKAEEARKAEdakkAEAARKaeEVRKAEELRKAEDARKAEAARKAEeerKAEEARKAEDAKKAEAVKKA 1232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1111 ELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQE----------ENVKLAEELGRSRD 1180
Cdd:PTZ00121 1233 EEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEkkkadeakkaEEKKKADEAKKKAE 1312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1181 EVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSAllTEKDAELEKLRNEVTVLRGENASAKSlHS 1260
Cdd:PTZ00121 1313 EAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEA--AEEKAEAAEKKKEEAKKKADAAKKKA-EE 1389
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 4506751 1261 VVQTLESDKVKLELKVKNLELQLKENKRQlssSSGNTDTQADEDERAQESQIDflnsviVDLQRKNQDLKMKVEMMSEA 1339
Cdd:PTZ00121 1390 KKKADEAKKKAEEDKKKADELKKAAAAKK---KADEAKKKAEEKKKADEAKKK------AEEAKKADEAKKKAEEAKKA 1459
|
|
| COG4487 |
COG4487 |
Uncharacterized conserved protein, contains DUF2130 domain [Function unknown]; |
999-1161 |
1.61e-03 |
|
Uncharacterized conserved protein, contains DUF2130 domain [Function unknown];
Pssm-ID: 443580 [Multi-domain] Cd Length: 425 Bit Score: 42.63 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 999 DLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGllQELEELRKQAdKAKAAQTAE 1078
Cdd:COG4487 37 ERLADAAKREAALELAEAKAKAQLQEQVAEKDAEIAELRARLEAEERKKALAVAEEKE--KELAALQEAL-AEKDAKLAE 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1079 DAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKEN-NLKNVEELNKSKELLTVENQK-MEEFRKEIETLKQAAAQ 1156
Cdd:COG4487 114 LQAKELELLKKERELEDAKREAELTVEKERDEELDELKEKlKKEEEEKQLAEKSLKVAEYEKqLKDMQEQIEELKRKKEQ 193
|
....*
gi 4506751 1157 KSQQL 1161
Cdd:COG4487 194 GSTQL 198
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
643-980 |
1.80e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 42.53 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 643 AEFAELKTQIEKMRLdyqhEIENLQNQQDSERaahaKEMEALRAKLMKVIKEKENSLEAIRSKLDKA----EDQHLVEME 718
Cdd:pfam06160 107 EELDELLESEEKNRE----EVEELKDKYRELR----KTLLANRFSYGPAIDELEKQLAEIEEEFSQFeeltESGDYLEAR 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 719 DTLNKLQEA----EIKVKELEVLQAKCneQTKVIDNFTsQLKATEEKLLDLD-ALRKASSEgkSEMKKLRQQLEAAEKQI 793
Cdd:pfam06160 179 EVLEKLEEEtdalEELMEDIPPLYEEL--KTELPDQLE-ELKEGYREMEEEGyALEHLNVD--KEIQQLEEQLEENLALL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 794 KHLEIEKNAESSKA---------SSITRELQGR---ELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQ- 860
Cdd:pfam06160 254 ENLELDEAEEALEEieeridqlyDLLEKEVDAKkyvEKNLPEIEDYLEHAEEQNKELKEELERVQQSYTLNENELERVRg 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 861 ---------RSMQETVNKLHQKEEQFNMLSSDLEKLRENLADME---AKFRE------KDERE--EQLIKAKEKLENDI- 919
Cdd:pfam06160 334 lekqleeleKRYDEIVERLEEKEVAYSELQEELEEILEQLEEIEeeqEEFKEslqslrKDELEarEKLDEFKLELREIKr 413
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 4506751 920 -----------AEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQ 980
Cdd:pfam06160 414 lveksnlpglpESYLDYFFDVSDEIEDLADELNEVPLNMDEVNRLLDEAQDDVDTLYEKTEELIDNATLAEQ 485
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
655-1151 |
1.81e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 42.52 E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 655 MRLDYQHEIENLQNQQDSERAAHAKEmEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEdtlNKLQEAEIKVKEL 734
Cdd:PRK04778 23 LRKRNYKRIDELEERKQELENLPVND-ELEKVKKLNLTGQSEEKFEEWRQKWDEIVTNSLPDIE---EQLFEAEELNDKF 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 735 EVLQAKcneqtKVIDNFTSQLKATEEkllDLDALRKassegksEMKKLRQQLEAAEKQIKHLeieknaesskassitREL 814
Cdd:PRK04778 99 RFRKAK-----HEINEIESLLDLIEE---DIEQILE-------ELQELLESEEKNREEVEQL---------------KDL 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 815 QgRELKLTNLQENLSeVSQVKETLEKELQILKEKFAEASE--------EAVSVQRSMQETVNKLHQKEEQFNMLSSDLEK 886
Cdd:PRK04778 149 Y-RELRKSLLANRFS-FGPALDELEKQLENLEEEFSQFVEltesgdyvEAREILDQLEEELAALEQIMEEIPELLKELQT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 887 -LRENLADMEAKFREkdereeqLIKAKEKLENDIAEimkmsgdnsSQLTKMNDELRLKERDVEELqlKLTKANENASFLQ 965
Cdd:PRK04778 227 eLPDQLQELKAGYRE-------LVEEGYHLDHLDIE---------KEIQDLKEQIDENLALLEEL--DLDEAEEKNEEIQ 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 966 KSIEDM------TVKAEQsqqeaakkheeekkelerklsDLEKKMETshnqcqeLKARYERATSETKTKHEEILQnLQKT 1039
Cdd:PRK04778 289 ERIDQLydilerEVKARK---------------------YVEKNSDT-------LPDFLEHAKEQNKELKEEIDR-VKQS 339
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1040 LLDTEDKLKGAREensgLLQELEELRKQADKAKAAQTAEDAM--QIMEQMTkektETLASLEDTKQTNAKLQNELDTLKE 1117
Cdd:PRK04778 340 YTLNESELESVRQ----LEKQLESLEKQYDEITERIAEQEIAysELQEELE----EILKQLEEIEKEQEKLSEMLQGLRK 411
|
490 500 510
....*....|....*....|....*....|....
gi 4506751 1118 nnlknvEELnkskelltVENQKMEEFRKEIETLK 1151
Cdd:PRK04778 412 ------DEL--------EAREKLERYRNKLHEIK 431
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
719-893 |
1.84e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.45 E-value: 1.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 719 DTLNKLQEAEIKVKELEV----LQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKassEGKSEMKKLRQQLEAAEKQIK 794
Cdd:COG1579 7 RALLDLQELDSELDRLEHrlkeLPAELAELEDELAALEARLEAAKTELEDLEKEIK---RLELEIEEVEARIKKYEEQLG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 795 hleiekNAESSK-ASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQK 873
Cdd:COG1579 84 ------NVRNNKeYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAE 157
|
170 180
....*....|....*....|
gi 4506751 874 EEQfnmLSSDLEKLRENLAD 893
Cdd:COG1579 158 LEE---LEAEREELAAKIPP 174
|
|
| HOOK |
pfam05622 |
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from ... |
709-978 |
1.97e-03 |
|
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organizms. The different members of the human gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three human HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas this central coiled-coil motif mediates homodimerization and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes, whereas both HOOK1 and HOOK2 are localized to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head. This entry includes the central coiled-coiled domain and the divergent C-terminal domain.
Pssm-ID: 461694 [Multi-domain] Cd Length: 528 Bit Score: 42.37 E-value: 1.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 709 AEDQHLvemEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLdALRKASSEgkSEMKK---LRQQ 785
Cdd:pfam05622 111 EEAQAL---KDEMDILRESSDKVKKLEATVETYKKKLEDLGDLRRQVKLLEERNAEY-MQRTLQLE--EELKKanaLRGQ 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 786 LEAAEKQIKHLEIEKNAESSKASSITRELQgrelkltNLQENLSEVSQVKETLEKELQILKE-----KFAEASEEAVSVQ 860
Cdd:pfam05622 185 LETYKRQVQELHGKLSEESKKADKLEFEYK-------KLEEKLEALQKEKERLIIERDTLREtneelRCAQLQQAELSQA 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 861 RSMQ-----------------ETVNKLHQKEEQFNMLS-----SDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEND 918
Cdd:pfam05622 258 DALLspssdpgdnlaaeimpaEIREKLIRLQHENKMLRlgqegSYRERLTELQQLLEDANRRKNELETQNRLANQRILEL 337
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 919 IAEIMKMSGDNSSQLTKMNDELRLKeRDVEELQLKLTKANENASFLQKSIEDMTVKAEQS 978
Cdd:pfam05622 338 QQQVEELQKALQEQGSKAEDSSLLK-QKLEEHLEKLHEAQSELQKKKEQIEELEPKQDSN 396
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1106-1251 |
2.01e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.45 E-value: 2.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1106 AKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRD--EVT 1183
Cdd:COG1579 13 QELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNnkEYE 92
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 4506751 1184 SHQK----LEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGE 1251
Cdd:COG1579 93 ALQKeiesLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAE 164
|
|
| PRK05431 |
PRK05431 |
seryl-tRNA synthetase; Provisional |
699-796 |
2.72e-03 |
|
seryl-tRNA synthetase; Provisional
Pssm-ID: 235461 [Multi-domain] Cd Length: 425 Bit Score: 41.98 E-value: 2.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 699 LEAIRSKLDK-AEDQHLVEMEDTLNKLQEAEIKVKEL----EVLQAKCNEQTKVIdnftSQLKATEEkllDLDALRKASS 773
Cdd:PRK05431 4 IKLIRENPEAvKEALAKRGFPLDVDELLELDEERRELqtelEELQAERNALSKEI----GQAKRKGE---DAEALIAEVK 76
|
90 100
....*....|....*....|...
gi 4506751 774 EGKSEMKKLRQQLEAAEKQIKHL 796
Cdd:PRK05431 77 ELKEEIKALEAELDELEAELEEL 99
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
456-687 |
2.82e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 2.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 456 ETQTKLE--HARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLEsnkpagdvdm 533
Cdd:COG4942 24 EAEAELEqlQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA---------- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 534 slSLLQEISSLQEKLEvtrtDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALwK 613
Cdd:COG4942 94 --ELRAELEAQKEELA----ELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAAL-R 166
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 4506751 614 SKLETAIASHQQAMEELKVSfSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAK 687
Cdd:COG4942 167 AELEAERAELEALLAELEEE-RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
664-971 |
3.09e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 42.20 E-value: 3.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 664 ENLQNQQDSERAAHAKEMEALRAKLMKVIKEKEN-SLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCN 742
Cdd:PLN02939 94 DDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDfQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKIN 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 743 eqtkvidnftsqlkATEEKLLDLDALRKASSEGKSEMKKLRQQLeaaEKQIKHLEIEKNAESSKASSITRELQgrELKLT 822
Cdd:PLN02939 174 --------------ILEMRLSETDARIKLAAQEKIHVEILEEQL---EKLRNELLIRGATEGLCVHSLSKELD--VLKEE 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 823 N---------LQENLSEVSQVKE---TLEKELQILKEKFAEASEEAVSVQRSMQET----VNKLHQKEEQFNMLSSDLEK 886
Cdd:PLN02939 235 NmllkddiqfLKAELIEVAETEErvfKLEKERSLLDASLRELESKFIVAQEDVSKLsplqYDCWWEKVENLQDLLDRATN 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 887 LRENLA---DMEAKFREK-DEREEQLIKAK-EKLENDIAEIM--KMSG-----DNSSQltKMNDELRLKERDVEELQLKL 954
Cdd:PLN02939 315 QVEKAAlvlDQNQDLRDKvDKLEASLKEANvSKFSSYKVELLqqKLKLleerlQASDH--EIHSYIQLYQESIKEFQDTL 392
|
330
....*....|....*....
gi 4506751 955 TKANENAS--FLQKSIEDM 971
Cdd:PLN02939 393 SKLKEESKkrSLEHPADDM 411
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
716-956 |
3.09e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.84 E-value: 3.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 716 EMEDTLNKLQEAEIkvkeLEVLQAKCNEQTKVIDNFTSQLKATEEKLldlDALRKASSEGKSEMK-KLRQQLEAAEKQIK 794
Cdd:PRK05771 17 YKDEVLEALHELGV----VHIEDLKEELSNERLRKLRSLLTKLSEAL---DKLRSYLPKLNPLREeKKKVSVKSLEELIK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 795 HLEIEknaesskASSITRELQGRELKLTNLQENLSEVSQVKETLEK------ELQILKEK------FAEASEEAVSVQRS 862
Cdd:PRK05771 90 DVEEE-------LEKIEKEIKELEEEISELENEIKELEQEIERLEPwgnfdlDLSLLLGFkyvsvfVGTVPEDKLEELKL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 863 MQETVNKLHQKEEQ------FNMLSSDLEKLRENLADMEAK-------------FREKDEREEQLIKAKEKLENDIAEIM 923
Cdd:PRK05771 163 ESDVENVEYISTDKgyvyvvVVVLKELSDEVEEELKKLGFErleleeegtpselIREIKEELEEIEKERESLLEELKELA 242
|
250 260 270
....*....|....*....|....*....|...
gi 4506751 924 KMSGDNSSQLtkmnDELRLKERDVEELQLKLTK 956
Cdd:PRK05771 243 KKYLEELLAL----YEYLEIELERAEALSKFLK 271
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
698-980 |
3.44e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.21 E-value: 3.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 698 SLEAIRSKLDKAEDQhlvemedtlnKLQEAEIKVkelevlqakcneqtkvidnftsqLKATEEKLLDLDALRKASsegKS 777
Cdd:PRK11281 37 TEADVQAQLDALNKQ----------KLLEAEDKL-----------------------VQQDLEQTLALLDKIDRQ---KE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 778 EMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRElQGRELKLTNLQENLSEVSQvketlekELQILKEKFAEASEEAV 857
Cdd:PRK11281 81 ETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRE-TLSTLSLRQLESRLAQTLD-------QLQNAQNDLAEYNSQLV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 858 SVQ----RSMQETVNKLHQKEEQFNMLSSDleklRENLADMEAKFREKDEREEQLIKAKEKLEndiaeimKMSGDNSSQL 933
Cdd:PRK11281 153 SLQtqpeRAQAALYANSQRLQQIRNLLKGG----KVGGKALRPSQRVLLQAEQALLNAQNDLQ-------RKSLEGNTQL 221
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 4506751 934 TkmndELRLKERDveELQLKLTKANENASFLQKSIED-------MTVKAEQSQQ 980
Cdd:PRK11281 222 Q----DLLQKQRD--YLTARIQRLEHQLQLLQEAINSkrltlseKTVQEAQSQD 269
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
477-1259 |
3.44e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 42.35 E-value: 3.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 477 KTKADKLQRELEDTRVATVSEKSRIMELekdlaLRVQEVAELRRRLESNKPAGDVdmslsLLQEISSLQEKLEVTRTDHQ 556
Cdd:TIGR01612 1499 KDEADKNAKAIEKNKELFEQYKKDVTEL-----LNKYSALAIKNKFAKTKKDSEI-----IIKEIKDAHKKFILEAEKSE 1568
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 557 REITSLK------EHFGAREETHQKEIKALYTATEKLskENESLKskLEHANKENSDVIALWKSkLETAIASHQQAMEEL 630
Cdd:TIGR01612 1569 QKIKEIKkekfriEDDAAKNDKSNKAAIDIQLSLENF--ENKFLK--ISDIKKKINDCLKETES-IEKKISSFSIDSQDT 1643
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 631 KVSFSKGLGTETAEFAE-LKTQIEKMRlDYQHEIENLQNQQDS---ERAAHAKEME-ALRAKLMKVIKEKENSLEAIRS- 704
Cdd:TIGR01612 1644 ELKENGDNLNSLQEFLEsLKDQKKNIE-DKKKELDELDSEIEKieiDVDQHKKNYEiGIIEKIKEIAIANKEEIESIKEl 1722
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 705 ------KLDKAEDQHLVEMEDTLNKLQEAEIKVKELEvlqakcNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSE 778
Cdd:TIGR01612 1723 ieptieNLISSFNTNDLEGIDPNEKLEEYNTEIGDIY------EEFIELYNIIAGCLETVSKEPITYDEIKNTRINAQNE 1796
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 779 MkklrqqleaaekqIKHLEIEKnaessKASSITRELQGRELK--LTNLQENLSEVSqvkETLEKELQILKEKFAEASEEA 856
Cdd:TIGR01612 1797 F-------------LKIIEIEK-----KSKSYLDDIEAKEFDriINHFKKKLDHVN---DKFTKEYSKINEGFDDISKSI 1855
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 857 VSVQRSMQEtvnklhqkeeqfNMLSSDLEKLRENLADMEAK--FREKDErEEQLIKAKEKLENDI-AEIMKMSGDNssQL 933
Cdd:TIGR01612 1856 ENVKNSTDE------------NLLFDILNKTKDAYAGIIGKkyYSYKDE-AEKIFINISKLANSInIQIQNNSGID--LF 1920
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 934 TKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDmtvkaeqsqqeaakkHEEEKKELERKLSDLEKKMETSHNQCQE 1013
Cdd:TIGR01612 1921 DNINIAILSSLDSEKEDTLKFIPSPEKEPEIYTKIRD---------------SYDTLLDIFKKSQDLHKKEQDTLNIIFE 1985
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1014 LKARYER---------ATSETKTKHEEILQNLqKTLLDTEDKLK--GAREENSGLLQELEELRKQADKAKAAQTAEDAM- 1081
Cdd:TIGR01612 1986 NQQLYEKiqasnelkdTLSDLKYKKEKILNDV-KLLLHKFDELNklSCDSQNYDTILELSKQDKIKEKIDNYEKEKEKFg 2064
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1082 -----QIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKME--------------E 1142
Cdd:TIGR01612 2065 idfdvKAMEEKFDNDIKDIEKFENNYKHSEKDNHDFSEEKDNIIQSKKKLKELTEAFNTEIKIIEdkiiekndlidkliE 2144
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1143 FRKE---------IETLKQAAAQKSQQLSALqeenVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDA 1213
Cdd:TIGR01612 2145 MRKEcllfsyatlVETLKSKVINHSEFITSA----AKFSKDFFEFIEDISDSLNDDIDALQIKYNLNQTKKHMISILADA 2220
|
810 820 830 840
....*....|....*....|....*....|....*....|....*....
gi 4506751 1214 DEEKASlqksisitsalLTEKDAELEKLRNEVTVL---RGENASAKSLH 1259
Cdd:TIGR01612 2221 TKDHNN-----------LIEKEKEATKIINNLTELftiDFNNADADILH 2258
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
864-1075 |
3.62e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.93 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 864 QETVNKL------HQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLikakeKLENDIAEIMKMSGDNSSQLTKMN 937
Cdd:COG3206 151 AAVANALaeayleQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEF-----RQKNGLVDLSEEAKLLLQQLSELE 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 938 DELRlkerdveELQLKLTKANENASFLQKSIE-DMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKA 1016
Cdd:COG3206 226 SQLA-------EARAELAEAEARLAALRAQLGsGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRA 298
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 4506751 1017 RYERATsetktkhEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQ 1075
Cdd:COG3206 299 QIAALR-------AQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELE 350
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
483-729 |
3.65e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.93 E-value: 3.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 483 LQRELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPAGDVDMslsLLQEISSLQEKLEVTRTDHQreitsl 562
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDLSEEAKL---LLQQLSELESQLAEARAELA------ 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 563 kehfgareethqkEIKALYTATEKLSKENESLKSKLEhankeNSDVIAlwksKLETAIASHQQAMEELkvsfSKGLGTET 642
Cdd:COG3206 237 -------------EAEARLAALRAQLGSGPDALPELL-----QSPVIQ----QLRAQLAELEAELAEL----SARYTPNH 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 643 AEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKL------MKVIKEKENSLEAIRSKLDKAEDQHlve 716
Cdd:COG3206 291 PDVIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLaqlearLAELPELEAELRRLEREVEVARELY--- 367
|
250
....*....|...
gi 4506751 717 mEDTLNKLQEAEI 729
Cdd:COG3206 368 -ESLLQRLEEARL 379
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
784-945 |
3.97e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.61 E-value: 3.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 784 QQLEAAEKQIKHLEIEKNAesskassITREL-QGRELKLTNLQENLSEvsqvketLEKELQILKEKFAEASEEAVSVQRS 862
Cdd:COG0542 411 EELDELERRLEQLEIEKEA-------LKKEQdEASFERLAELRDELAE-------LEEELEALKARWEAEKELIEEIQEL 476
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 863 MQEtvnkLHQKEEQFNMLSSDLEKLRENLADMEAKFREK-DereeqlikakeklENDIAEIM---------KMSGDNSSQ 932
Cdd:COG0542 477 KEE----LEQRYGKIPELEKELAELEEELAELAPLLREEvT-------------EEDIAEVVsrwtgipvgKLLEGEREK 539
|
170
....*....|...
gi 4506751 933 LTKMNDElrLKER 945
Cdd:COG0542 540 LLNLEEE--LHER 550
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
756-969 |
4.45e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.04 E-value: 4.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 756 KATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVK 835
Cdd:COG4372 31 EQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 836 ETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREeqLIKAKEKL 915
Cdd:COG4372 111 EELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAE--AEQALDEL 188
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 4506751 916 ENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIE 969
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDAL 242
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1058-1265 |
4.79e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.29 E-value: 4.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1058 LQELEELRKQADKAKAAQTAedamqiMEQMTKEKTETLASLEDTKQTNAKLQNELDTLK--ENNLKNVEELNKSKELLTV 1135
Cdd:COG4717 70 LKELKELEEELKEAEEKEEE------YAELQEELEELEEELEELEAELEELREELEKLEklLQLLPLYQELEALEAELAE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1136 ENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELgrsrdEVTSHQKLEEersvlnnqllemkkreskfIKDADE 1215
Cdd:COG4717 144 LPERLEELEERLEELRELEEELEELEAELAELQEELEELL-----EQLSLATEEE-------------------LQDLAE 199
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 4506751 1216 EKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTL 1265
Cdd:COG4717 200 ELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEAR 249
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
715-919 |
4.86e-03 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 41.17 E-value: 4.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 715 VEMEDTLNKLQEAEIKV--KELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQ 792
Cdd:pfam05667 323 VETEEELQQQREEELEElqEQLEDLESSIQELEKEIKKLESSIKQVEEELEELKEQNEELEKQYKVKKKTLDLLPDAEEN 402
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 793 IKHLEIEKNAESSKassitrelqgrelkltnLQENLSEVSQVKETLEKELQILKEKFAEASEEAvsvQRSMQEtvnklhq 872
Cdd:pfam05667 403 IAKLQALVDASAQR-----------------LVELAGQWEKHRVPLIEEYRALKEAKSNKEDES---QRKLEE------- 455
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 4506751 873 keeqfnmlssdLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDI 919
Cdd:pfam05667 456 -----------IKELREKIKEVAEEAKQKEELYKQLVAEYERLPKDV 491
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
353-723 |
5.00e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.54 E-value: 5.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 353 LQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELalarDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLE 432
Cdd:TIGR04523 361 KQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKI----QNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETII 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 433 EEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRV 512
Cdd:TIGR04523 437 KNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLT 516
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 513 QEVAELRRR-----------------LESNKPAGDVDMSLSLLQ-EISSLQEKLEVTRTDhQREITSLKEHFGAREETHQ 574
Cdd:TIGR04523 517 KKISSLKEKieklesekkekeskisdLEDELNKDDFELKKENLEkEIDEKNKEIEELKQT-QKSLKKKQEEKQELIDQKE 595
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 575 KEIKALYTATEKLSKENESLKSKLEHANKENSDvIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEK 654
Cdd:TIGR04523 596 KEKKDLIKEIEEKEKKISSLEKELEKAKKENEK-LSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTK 674
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 4506751 655 MrldyqHEIENLQNQQDSERAAHAKE--MEALRAKLMKVIKEKENSLEAIRSKLDKAEDQhLVEMEDTLNK 723
Cdd:TIGR04523 675 I-----DDIIELMKDWLKELSLHYKKyiTRMIRIKDLPKLEEKYKEIEKELKKLDEFSKE-LENIIKNFNK 739
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
587-841 |
5.08e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.15 E-value: 5.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 587 LSKENESLKSKLEHANkENSDVIALWKSKLETAIASHQQAMEELKvsfsKGLGTETAEFAELKTQIEKMRLDYQHEIENL 666
Cdd:PHA02562 165 LSEMDKLNKDKIRELN-QQIQTLDMKIDHIQQQIKTYNKNIEEQR----KKNGENIARKQNKYDELVEEAKTIKAEIEEL 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 667 QNQQdseraahakemealrAKLMKVIKEKENSLEAIRSKLDKAEDQHlvemeDTLNKL--------------QEAEIKVK 732
Cdd:PHA02562 240 TDEL---------------LNLVMDIEDPSAALNKLNTAAAKIKSKI-----EQFQKVikmyekggvcptctQQISEGPD 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 733 ELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEieknAESSKASSitr 812
Cdd:PHA02562 300 RITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVK----AAIEELQA--- 372
|
250 260
....*....|....*....|....*....
gi 4506751 813 ELQGRELKLTNLQENLSEVSQVKETLEKE 841
Cdd:PHA02562 373 EFVDNAEELAKLQDELDKIVKTKSELVKE 401
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
813-1277 |
5.38e-03 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 41.36 E-value: 5.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 813 ELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFaeaseeavsvqrsmqetvNKLHQKEEQFNMLSSDLEKLRENLA 892
Cdd:PTZ00440 485 SKEKKESSDSNYQEKVDELLQIINSIKEKNNIVNNNF------------------KNIEDYYITIEGLKNEIEGLIELIK 546
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 893 DMEAKFREKDEREeqliKAKEKLENDIAEIMKMSGDNSSQLTKM---NDELRLKERDVEELqLKLTKANENASFLQKSIE 969
Cdd:PTZ00440 547 YYLQSIETLIKDE----KLKRSMKNDIKNKIKYIEENVDHIKDIislNDEIDNIIQQIEEL-INEALFNKEKFINEKNDL 621
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 970 DMTVKaeqsqqeaakkheeeKKELERKLSDLEKKMETSHNQCQELKARYERATSETKtkheeiLQNLQKTLLDTEDKLKG 1049
Cdd:PTZ00440 622 QEKVK---------------YILNKFYKGDLQELLDELSHFLDDHKYLYHEAKSKED------LQTLLNTSKNEYEKLEF 680
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1050 AREEN--------SGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLK 1121
Cdd:PTZ00440 681 MKSDNidniiknlKKELQNLLSLKENIIKKQLNNIEQDISNSLNQYTIKYNDLKSSIEEYKEEEEKLEVYKHQIINRKNE 760
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1122 NVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLE 1201
Cdd:PTZ00440 761 FILHLYENDKDLPDGKNTYEEFLQYKDTILNKENKISNDINILKENKKNNQDLLNSYNILIQKLEAHTEKNDEELKQLLQ 840
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 4506751 1202 MKKRESKFIKDADEEKaSLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTLESdkvKLELKVK 1277
Cdd:PTZ00440 841 KFPTEDENLNLKELEK-EFNENNQIVDNIIKDIENMNKNINIIKTLNIAINRSNSNKQLVEHLLNN---KIDLKNK 912
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
351-743 |
5.42e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 41.03 E-value: 5.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 351 TALQEALKEKQQHIEQLLAERDleraevaKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQ 430
Cdd:pfam07888 30 ELLQNRLEECLQERAELLQAQE-------AANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEK 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 431 LEEEKRKVEDLqfrveeeSITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEdtrvatvseksRIMELEKDLAL 510
Cdd:pfam07888 103 YKELSASSEEL-------SEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELE-----------RMKERAKKAGA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 511 RVQEVAELRRRLESNKPAGDVDM-SLSL-LQEISSLQEKLEVTRTDHQREITSLKEHFGAreeTHQKEikalyTATEKLS 588
Cdd:pfam07888 165 QRKEEEAERKQLQAKLQQTEEELrSLSKeFQELRNSLAQRDTQVLQLQDTITTLTQKLTT---AHRKE-----AENEALL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 589 KENESLKSKLEHANKEnsdvIALWKSKLETAIASHQQAMEELKVSFSKgLGTETAEFAELKTQIEKMRLDYQHEIENLQN 668
Cdd:pfam07888 237 EELRSLQERLNASERK----VEGLGEELSSMAAQRDRTQAELHQARLQ-AAQLTLQLADASLALREGRARWAQERETLQQ 311
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 4506751 669 QQDSERAAHAKEMEALRaKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQE--AEIKV--KELEVLQAKCNE 743
Cdd:pfam07888 312 SAEADKDRIEKLSAELQ-RLEERLQEERMEREKLEVELGREKDCNRVQLSESRRELQElkASLRVaqKEKEQLQAEKQE 389
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
881-1155 |
6.43e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.52 E-value: 6.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 881 SSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANEN 960
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 961 ASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEkkmetshnqcqelkaryeratsetktkheeILQNLQKTL 1040
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQ------------------------------YLKYLAPAR 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1041 LDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEdamqimeqmtkektetLASLEDTKQTNAKLQNELDTLKENNL 1120
Cdd:COG4942 149 REQAEELRADLAELAALRAELEAERAELEALLAELEEE----------------RAALEALKAERQKLLARLEKELAELA 212
|
250 260 270
....*....|....*....|....*....|....*
gi 4506751 1121 KNVEELNKSKELLTVENQKMEEFRKEIETLKQAAA 1155
Cdd:COG4942 213 AELAELQQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1126-1329 |
6.46e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 6.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1126 LNKSKELLTVENQKMEEF-RKEIETLKQAAAQKSQQLSALQEEN--VKLAEELGRSRDEVTShqkLEEERSVLNNQLLEM 1202
Cdd:COG3206 162 LEQNLELRREEARKALEFlEEQLPELRKELEEAEAALEEFRQKNglVDLSEEAKLLLQQLSE---LESQLAEARAELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1203 KKRESKFIKDADEEKASLqkSISITSALLTEKDAELEKLRNEVTVLRgenASAKSLHSVVQTLESdkvklelKVKNLELQ 1282
Cdd:COG3206 239 EARLAALRAQLGSGPDAL--PELLQSPVIQQLRAQLAELEAELAELS---ARYTPNHPDVIALRA-------QIAALRAQ 306
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 4506751 1283 LKENKRQLSSSSGNTDTQADEDERAQESQIDFLNSVIVDLQRKNQDL 1329
Cdd:COG3206 307 LQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAEL 353
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
364-690 |
7.19e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.05 E-value: 7.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 364 IEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRtmVEAADREkvelLNQLEEEKRKVEDlqf 443
Cdd:COG4913 612 LAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEID--VASAERE----IAELEAELERLDA--- 682
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 444 rveeesitkgdletqtklEHARIKELEQSLlfektkaDKLQRELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLE 523
Cdd:COG4913 683 ------------------SSDDLAALEEQL-------EELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLE 737
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 524 SNKPAGDV--------------------DMSLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTA 583
Cdd:COG4913 738 AAEDLARLelralleerfaaalgdaverELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEY 817
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 584 TEKLSK-ENESL---KSKLEHANKENSDV-IALWKSKLETAIASHQQAMEEL-----KVSFSKG----LGTETAEFAELK 649
Cdd:COG4913 818 LALLDRlEEDGLpeyEERFKELLNENSIEfVADLLSKLRRAIREIKERIDPLndslkRIPFGPGrylrLEARPRPDPEVR 897
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 4506751 650 tqiekmrlDYQHEIENLQNQQ----DSERAAHAKEMEALRAKLMK 690
Cdd:COG4913 898 --------EFRQELRAVTSGAslfdEELSEARFAALKRLIERLRS 934
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
780-1327 |
8.09e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 40.73 E-value: 8.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 780 KKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSV 859
Cdd:pfam02463 198 QELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEE 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 860 QRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKmsgdnssQLTKMNDE 939
Cdd:pfam02463 278 EKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEK-------ELKELEIK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 940 LRLKERDVEELQLKLTKANENASFLQKSIEDMTvkAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYE 1019
Cdd:pfam02463 351 REAEEEEEEELEKLQEKLEQLEEELLAKKKLES--ERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEE 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1020 RATSETKTKHEEILQNLQKTLLDTEDKLKGAREENsgllqeLEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLE 1099
Cdd:pfam02463 429 LEILEEEEESIELKQGKLTEEKEELEKQELKLLKD------ELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKE 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1100 DTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENV------KLAE 1173
Cdd:pfam02463 503 SKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTElplgarKLRL 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1174 ELGRSRDEVTSHQKLEEERSVLNNQLLemKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENA 1253
Cdd:pfam02463 583 LIPKLKLPLKSIAVLEIDPILNLAQLD--KATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAE 660
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 4506751 1254 SAKSLHSVVQTLESDKVKLELKVKN-LELQLKENKRQLSSSSGNTDTQADEDERAQESQIDFLNSVIVDLQRKNQ 1327
Cdd:pfam02463 661 KSEVKASLSELTKELLEIQELQEKAeSELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKIN 735
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
747-917 |
8.19e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 40.58 E-value: 8.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 747 VIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKH-LEIE-----KNAESSkASSITRELQGRElK 820
Cdd:PRK00409 521 LIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEeAEKEaqqaiKEAKKE-ADEIIKELRQLQ-K 598
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 821 LTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQ-------RSMQETVNKLHQKEEQFNMLSSDLEKLRENLAD 893
Cdd:PRK00409 599 GGYASVKAHELIEARKRLNKANEKKEKKKKKQKEKQEELKvgdevkyLSLGQKGEVLSIPDDKEAIVQAGIMKMKVPLSD 678
|
170 180
....*....|....*....|....
gi 4506751 894 MEAKFREKDEREEQLIKAKEKLEN 917
Cdd:PRK00409 679 LEKIQKPKKKKKKKPKTVKPKPRT 702
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1015-1361 |
9.14e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 40.66 E-value: 9.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1015 KARYERATSETKtkhEEILQNLQKTLLDTEDKLKGAREENSGLLQELEEL---RKQADKAKAAQTAEDAMQIMEQMTKEK 1091
Cdd:PLN02939 36 RARRRGFSSQQK---KKRGKNIAPKQRSSNSKLQSNTDENGQLENTSLRTvmeLPQKSTSSDDDHNRASMQRDEAIAAID 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1092 TETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSK-----ELLTVENQKmEEFRKEIETLKQAAAQKSQQLSALQE 1166
Cdd:PLN02939 113 NEQQTNSKDGEQLSDFQLEDLVGMIQNAEKNILLLNQARlqaleDLEKILTEK-EALQGKINILEMRLSETDARIKLAAQ 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1167 ENVK---LAEELGRSRDEVTshQKLEEERSVLNNQLLEMKkreskfikDADEEKASLQKSISITSALL---TEKDAELEK 1240
Cdd:PLN02939 192 EKIHveiLEEQLEKLRNELL--IRGATEGLCVHSLSKELD--------VLKEENMLLKDDIQFLKAELievAETEERVFK 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1241 LRNEVTVLrgeNASAKSLHSVVQTLESDKVKLEL--------KVKNLELQLkenkrqlssssgntDTQADEDERAqesqi 1312
Cdd:PLN02939 262 LEKERSLL---DASLRELESKFIVAQEDVSKLSPlqydcwweKVENLQDLL--------------DRATNQVEKA----- 319
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 4506751 1313 dflnsvIVDLQRkNQDLKMKVEMMSEAALNGNGDDLNNYDSDDQEKQSK 1361
Cdd:PLN02939 320 ------ALVLDQ-NQDLRDKVDKLEASLKEANVSKFSSYKVELLQQKLK 361
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
824-979 |
9.21e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.27 E-value: 9.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 824 LQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDE 903
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 4506751 904 REEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQ 979
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQA 184
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1030-1201 |
9.30e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.52 E-value: 9.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1030 EEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAkaaqtaEDAMQIMEQMTKEKTETLASLEDTKQTNAkLQ 1109
Cdd:COG1579 23 EHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRL------ELEIEEVEARIKKYEEQLGNVRNNKEYEA-LQ 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1110 NELDTLKennlKNVEELNksKELLTVENQKmEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTshQKLE 1189
Cdd:COG1579 96 KEIESLK----RRISDLE--DEILELMERI-EELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELE--AERE 166
|
170
....*....|..
gi 4506751 1190 EERSVLNNQLLE 1201
Cdd:COG1579 167 ELAAKIPPELLA 178
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
768-1241 |
9.64e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 40.71 E-value: 9.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 768 LRKASSEGKSEMKKLRQQLEA-AEKQ-----IKHL---------------EIEKNAESSKASSITRELQGRELKLTNLQE 826
Cdd:PRK04863 228 VRKAFQDMEAALRENRMTLEAiRVTQsdrdlFKHLitestnyvaadymrhANERRVHLEEALELRRELYTSRRQLAAEQY 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 827 NLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQetvnklHQkeEQFNMLSSDLEKLRENLADMEAKFREKDEREE 906
Cdd:PRK04863 308 RLVEMARELAELNEAESDLEQDYQAASDHLNLVQTALR------QQ--EKIERYQADLEELEERLEEQNEVVEEADEQQE 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 907 QLIKAKEKLENDIAEImkmsgdnSSQLTKMNDELRLKERDV----EELQLkLTKANE---NASFLQKSIEDM--TVKAEQ 977
Cdd:PRK04863 380 ENEARAEAAEEEVDEL-------KSQLADYQQALDVQQTRAiqyqQAVQA-LERAKQlcgLPDLTADNAEDWleEFQAKE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 978 SQQEAAKKheeekkelerklsDLEKKMETShnqcqelkaryeratSETKTKHEEILQNLQKTL--LDTEDKLKGAREens 1055
Cdd:PRK04863 452 QEATEELL-------------SLEQKLSVA---------------QAAHSQFEQAYQLVRKIAgeVSRSEAWDVARE--- 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1056 gLLQELEELRKQADKAKAAQTA-----------EDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKennlknvE 1124
Cdd:PRK04863 501 -LLRRLREQRHLAEQLQQLRMRlseleqrlrqqQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLS-------E 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4506751 1125 ELNKSKELLTVENQKMEEFRKEIETLkqaaAQKSQQLSALQEENVKLAEELGrsrDEVTSHQKLEEERSvlnnQLLEmKK 1204
Cdd:PRK04863 573 SVSEARERRMALRQQLEQLQARIQRL----AARAPAWLAAQDALARLREQSG---EEFEDSQDVTEYMQ----QLLE-RE 640
|
490 500 510
....*....|....*....|....*....|....*...
gi 4506751 1205 RESKFIKD-ADEEKASLQKSISITSALLTEKDAELEKL 1241
Cdd:PRK04863 641 RELTVERDeLAARKQALDEEIERLSQPGGSEDPRLNAL 678
|
|
| |
