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Conserved domains on  [gi|449469466|ref|XP_004152441|]
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uncharacterized protein LOC101214681 [Cucumis sativus]

Protein Classification

DUF1118 domain-containing protein( domain architecture ID 10534928)

DUF1118 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1118 pfam06549
Protein of unknown function (DUF1118); This family consists of several hypothetical plant ...
 89-203 1.14e-26

Protein of unknown function (DUF1118); This family consists of several hypothetical plant proteins of unknown function.


:

Pssm-ID: 368969  Cd Length: 115  Bit Score: 98.23  E-value: 1.14e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 449469466   89 KLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALVAIVVIPDD 168
Cdd:pfam06549   1 KLEKLKLLSKVEKAGLLSAAEKLGFTLSSIEKLGLLSKAEELGLLSLAEDPATFSPGALASLALPLLVAGPAAVVFVPDD 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 449469466  169 SVALVALQAVVGGGLALGAAGLLVGSVVLGGLQEA 203
Cdd:pfam06549  81 STALVALQAVVALALVVGGSGAFAGSVVLSGLQES 115
 
Name Accession Description Interval E-value
DUF1118 pfam06549
Protein of unknown function (DUF1118); This family consists of several hypothetical plant ...
 89-203 1.14e-26

Protein of unknown function (DUF1118); This family consists of several hypothetical plant proteins of unknown function.


Pssm-ID: 368969  Cd Length: 115  Bit Score: 98.23  E-value: 1.14e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 449469466   89 KLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALVAIVVIPDD 168
Cdd:pfam06549   1 KLEKLKLLSKVEKAGLLSAAEKLGFTLSSIEKLGLLSKAEELGLLSLAEDPATFSPGALASLALPLLVAGPAAVVFVPDD 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 449469466  169 SVALVALQAVVGGGLALGAAGLLVGSVVLGGLQEA 203
Cdd:pfam06549  81 STALVALQAVVALALVVGGSGAFAGSVVLSGLQES 115
 
Name Accession Description Interval E-value
DUF1118 pfam06549
Protein of unknown function (DUF1118); This family consists of several hypothetical plant ...
 89-203 1.14e-26

Protein of unknown function (DUF1118); This family consists of several hypothetical plant proteins of unknown function.


Pssm-ID: 368969  Cd Length: 115  Bit Score: 98.23  E-value: 1.14e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 449469466   89 KLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALVAIVVIPDD 168
Cdd:pfam06549   1 KLEKLKLLSKVEKAGLLSAAEKLGFTLSSIEKLGLLSKAEELGLLSLAEDPATFSPGALASLALPLLVAGPAAVVFVPDD 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 449469466  169 SVALVALQAVVGGGLALGAAGLLVGSVVLGGLQEA 203
Cdd:pfam06549  81 STALVALQAVVALALVVGGSGAFAGSVVLSGLQES 115
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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