|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-202 |
1.79e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 221.55 E-value: 1.79e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWLNFLIFFLYFFSTGL 80
Cdd:MTH00165 308 LFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGL 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 81 TASYSFRLFYYSMSGDNNFYSSFSFDDKGFYISFGMIGLLFVAVFGGSLLSWLIFPIPHMIVLPYYLKFLTISVVILGSY 160
Cdd:MTH00165 388 TVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGW 467
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 448259607 161 FGYLISKFDFSHNLFSLNMLSFVSFAGSMWFMPFLSTKFISY 202
Cdd:MTH00165 468 LGYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISY 509
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
1-202 |
9.22e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 147.87 E-value: 9.22e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWLNFLIFFLYFFSTGL 80
Cdd:MTH00209 304 LFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 81 TASYSFRLFYYSMSGDNNFYSSFSFDDKGFYISFGMIGLLFVAVFGGSLLSWLIFPIPHMIVLPYYLKFLTISVVILGSY 160
Cdd:MTH00209 384 TAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVL 463
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 448259607 161 FGYLISKfdfsHNLFSLNMLSFVSFAGSMWFMPFLSTKFISY 202
Cdd:MTH00209 464 LMYMVLK----KNFFLIKGYKVNYFLSQMWFLPDLSSQPVNK 501
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-201 |
3.18e-41 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 146.45 E-value: 3.18e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWLNFLIFFLYFFSTGL 80
Cdd:MTH00207 308 LFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATAL 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 81 TASYSFRLFYYSMSGDNNFYSSFSFDDKGFYISFGMIGLLFVAVFGGSLLSWLIFPIPHMIVLPYYLKFLTISVVILGSY 160
Cdd:MTH00207 388 TAAYSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGAL 467
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 448259607 161 FGYLISKFDFSHNLFSLNMLSFVSFAGSMWFMPFLSTKFIS 201
Cdd:MTH00207 468 LAWLFTTPNITKTPLLINNPLSHFASCLMWFLVPLSSQFIM 508
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-202 |
1.03e-37 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 136.90 E-value: 1.03e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWLNFLIFFLYFFSTGL 80
Cdd:MTH00151 305 LFLCAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGL 384
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 81 TASYSFRLFYYSMSGDNNFYSSFSFDDKGFYISFGMIGLLFVAVFGGSLLSWLIFPIPHMIVLPYYLKFLTISVVILGSY 160
Cdd:MTH00151 385 TALYSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLF 464
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 448259607 161 FGYLisKFDFSHNLFSLNMLSFvsFAGSMWFMPFLSTKFISY 202
Cdd:MTH00151 465 LSFG--FWDSGFSSSKMVKLSF--FFSSMWFLSPLSSQPLKS 502
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
1-202 |
5.68e-31 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 118.53 E-value: 5.68e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWLNFLIFFLYFFSTGL 80
Cdd:MTH00208 365 LFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLL 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 81 TASYSFRLFYYSMSGDNNFYSSFSFDDKGFYISFGMIGLLFVAVFGGSLLSWLIFPIPHmIVLPYYLKFLTISVVILGSY 160
Cdd:MTH00208 445 TAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLPP-LTLPLILKSLPLIVTIIGAA 523
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 448259607 161 FGYLISKFdFSHNLFSLNMLSFVSFAgsmWFMPFLSTKFISY 202
Cdd:MTH00208 524 FSFSFLLS-LSSNPINSNFFSFLSNQ---WFFVNISHSIIIS 561
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-162 |
7.71e-31 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 117.96 E-value: 7.71e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWLNFLIFFLYFFSTGL 80
Cdd:MTH00004 338 LFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSF 417
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 81 TASYSFRLFYYSMSGDNNFYSSFSFDDKGFYISFGMIGLLFVAVFGGSLLSWLIFPI-PHMIVLPYYLKFLTISVVILGS 159
Cdd:MTH00004 418 TAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGI 497
|
...
gi 448259607 160 YFG 162
Cdd:MTH00004 498 LLA 500
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-158 |
4.64e-30 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 115.72 E-value: 4.64e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWLNFLIFFLYFFSTGL 80
Cdd:MTH00108 339 LFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSL 418
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 81 TASYSFRLFYYSMSGDNNFYSSFSFDDKGFYISFGMIGLLFVAVFGGSLLSWLIFP--IPHMiVLPYYLKFLTISVVILG 158
Cdd:MTH00108 419 TAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPttIPQM-TMPLYLKLTALAVTILG 497
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-202 |
4.23e-29 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 113.12 E-value: 4.23e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWLNFLIFFLYFFSTGL 80
Cdd:MTH00211 333 LFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSL 412
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 81 TASYSFRLFYYSMSGDNNFYSSFSFDDKGFYISFGMIGLLFVAVFGGSLLSWLIFPIPHMIV-LPYYLKFLTISVVILGS 159
Cdd:MTH00211 413 TAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILsLPFLLKLMPLLVTIVGL 492
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 448259607 160 YFGYLISKFdfshnLFSLNMLSFVSFAGSMWFMPFLSTKFISY 202
Cdd:MTH00211 493 LLGLELVNL-----THKQLKTSTLSFSNMLGYYPPIIHRLLPK 530
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-182 |
1.34e-26 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 106.15 E-value: 1.34e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWLNFLIFFLYFFSTGL 80
Cdd:MTH00066 336 LFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSF 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 81 TASYSFRLFYYSMSGDNNFYSSFSFDDKGFYISFGMIGLLFVAVFGGSLLSWLIFPIPHMIV-LPYYLKFLTISVVILGS 159
Cdd:MTH00066 416 TAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILtMPTFMKLAALLVTLLGL 495
|
170 180
....*....|....*....|...
gi 448259607 160 YFGYLISKFdFSHNLFSLNMLSF 182
Cdd:MTH00066 496 LIALDLAKI-TSKTTPKTKMHSF 517
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
1-93 |
3.44e-26 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 104.91 E-value: 3.44e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWLNFLIFFLYFFSTGL 80
Cdd:MTH00137 344 LFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSF 423
|
90
....*....|....
gi 448259607 81 TASYSFRL-FYYSM 93
Cdd:MTH00137 424 TAVYSLRVvFFVSM 437
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
84-202 |
6.30e-24 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 93.00 E-value: 6.30e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 84 YSFRLFYYSMSGDNNFYSSFSFDDKGFYISFGMIGLLFVAVFGGSLLSWLIFPIPHMIVLPYYLKFLTISVVILGSYFGY 163
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110
....*....|....*....|....*....|....*....
gi 448259607 164 LISKFDFSHNLFSLNMlSFVSFAGSMWFMPFLSTKFISY 202
Cdd:pfam06455 81 ELSNLSNKQLKKSLNF-NLHSFSGSMWFFPNLSHRLIPK 118
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-165 |
6.64e-20 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 86.75 E-value: 6.64e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEmVCLSWLNFLIFFLYFFSTGL 80
Cdd:PRK06590 346 LFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILE-AAFANGHINLFVAGLVGAFL 424
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 81 TASYSFRLFyysmsgdnnFYSSFSFDDKGFY--------ISFGMIGLLFVAVFGG-----SLLSWLIFP-----IPHMIV 142
Cdd:PRK06590 425 TAFYSFRLI---------FLVFHGKEKEKIHhphespavMTLPLIVLAVLSVFAGalivpPFLGVLPLTtelahGEAEHH 495
|
170 180
....*....|....*....|...
gi 448259607 143 LPYYLKFLTISVVILGSYFGYLI 165
Cdd:PRK06590 496 LPVWVALLPLVVALAGIALAWLL 518
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
1-200 |
7.57e-20 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 86.60 E-value: 7.57e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWLNFLIFFLYFFSTGL 80
Cdd:MTH00210 340 LFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALL 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 81 TASYSFRLFYYSMSGDNNFYSS--FSFDDKGFYISFGMIGLLFVAVFGGSL-----LSWLIFPIphmivLPYYLKFLTIS 153
Cdd:MTH00210 420 TAFYSIRLIYLTFITNTNSKKEvfIGVHESSWNITFPLLLLAFGSIFVGYLgkevvLSNVIPPI-----VPNSIKMIPLL 494
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 448259607 154 VVILGSYFGYLI------SKFDFSHNLFSLNMLSFVSFAGSMWFMPFLSTKFI 200
Cdd:MTH00210 495 FSLLGALLAFVIynsmvfLIKISRRGVSIRLYHVIYTFLNSAWQFNYVINHFI 547
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-165 |
1.29e-19 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 85.97 E-value: 1.29e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLkDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE-MVCLSWLNFLIFFLYFFSTG 79
Cdd:COG1009 340 LFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAF 418
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 80 LTASYSFRLFYYSMSGDNNFYSSFSFDDKGFYISFGMIGLLFVAVFGGSLLSWL---------IFPIPHMIVLPYYLKFL 150
Cdd:COG1009 419 LTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNAL 498
|
170
....*....|....*
gi 448259607 151 TISVVILGSYFGYLI 165
Cdd:COG1009 499 PLLLSLLGIALGYLL 513
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-201 |
1.75e-19 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 85.51 E-value: 1.75e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWLNFLIFFLYFFSTGL 80
Cdd:MTH00020 339 LFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALL 418
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 81 TASYSFRLFYYS-MSGDNNFYSSFSFDDKGFYISFGMIGLL-FVAVFGGSLLSWLIF--------PIPHMI-VLPYYLKF 149
Cdd:MTH00020 419 TAFYSIRLIYLTfLSNTNLKKAVFFHLHEGDWNLLLPLGILaLGSIFVGYLAKEMIWsfqitlppIVPLSIkLLPVFLSL 498
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 448259607 150 LTISVVILgsYFGYLISKFDFshnLFSLNMLSFVSFAGSMWFMPFLSTKFIS 201
Cdd:MTH00020 499 GGIGLVII--LYFYSSKTFRV---PFSFIGRNSYTFLGSAWQFNYILNYFLI 545
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-96 |
7.83e-17 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 77.76 E-value: 7.83e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKD--------SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSwlNFLIFF 72
Cdd:PRK07376 356 LFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWF 433
|
90 100
....*....|....*....|....
gi 448259607 73 LYFFSTGLTASYSFRLFYYSMSGD 96
Cdd:PRK07376 434 VGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-111 |
1.12e-11 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 62.99 E-value: 1.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNL--------KDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMvclSWLNFLIF- 71
Cdd:CHL00025 356 LFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILND---SWLYSPIFa 432
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 448259607 72 FLYFFSTGLTASYSFRLFYYSMSGD--NNFYSSFSFDDKGFY 111
Cdd:CHL00025 433 IIAWSTAGLTAFYMFRIYLLTFEGHlrVHFQNYSGKKNSSFY 474
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
1-77 |
3.12e-11 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 60.79 E-value: 3.12e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 448259607 1 LFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWLNFLIFFLYFFS 77
Cdd:pfam00361 215 LFLCAGSVIYRRVHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
1-60 |
1.40e-09 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 56.89 E-value: 1.40e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 448259607 1 LFMCAGSMIHNLK-DSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEM 60
Cdd:MTH00032 355 LFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-91 |
1.93e-08 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 53.23 E-value: 1.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVcLSWLNFLIFFLYFFSTGL 80
Cdd:COG0651 340 LFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAA-LEAGAWLLAAVLLLSSLL 417
|
90
....*....|.
gi 448259607 81 TASYSFRLFYY 91
Cdd:COG0651 418 TLAYFVRIFGR 428
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-90 |
2.53e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 46.89 E-value: 2.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWLNFLIFFLYFFSTgL 80
Cdd:PRK12667 363 LFLASGVFIHAAG-TRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-I 440
|
90
....*....|
gi 448259607 81 TASYSFRLFY 90
Cdd:PRK12667 441 SLVGYFRAWY 450
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
1-82 |
4.80e-05 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 43.36 E-value: 4.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSkdlILEMVCLSWLNFLIFFLYF-FSTG 79
Cdd:PRK07390 349 LFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA---LLRLADGLWAVSPWLVGVLlLVNA 424
|
...
gi 448259607 80 LTA 82
Cdd:PRK07390 425 LTA 427
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-89 |
5.02e-05 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 43.15 E-value: 5.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSwlNFLIFFLYFFSTGL 80
Cdd:COG1008 343 LFLLVGVLYDRTH-TRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQV--NPWLAILAALGLIL 419
|
....*....
gi 448259607 81 TASYSFRLF 89
Cdd:COG1008 420 TAAYLLWMY 428
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
1-59 |
1.13e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 42.03 E-value: 1.13e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 448259607 1 LFMCAGSMIHNLKDsQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 59
Cdd:PRK08667 349 LFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
1-152 |
1.95e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 41.44 E-value: 1.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWLNFLIFFLYFFSTGL 80
Cdd:MTH00095 292 LFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFL 371
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 448259607 81 TASYSFRLFYysmsgdnNFYSSFSFDDKGFYISFGMIGLLFVAVFGG-SLLSWLIFPIPHMIVLPYYLKFLTI 152
Cdd:MTH00095 372 TFGYSYRLWK-------SFFLSFSKVVNVYSSSVLMNFLSLMLVFFSvFFLWWLNFNLLNLPSLFLYLDFYVP 437
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-91 |
2.76e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 41.02 E-value: 2.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSK-DLILEMVCLSWLNFLIFFLyfFSTG 79
Cdd:PRK08375 339 LFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKwYLVVGAVEAGQWLVLAVLL--ASSL 415
|
90
....*....|..
gi 448259607 80 LTASYSFRLFYY 91
Cdd:PRK08375 416 LALLYFLRIWYR 427
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
1-58 |
3.01e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 41.03 E-value: 3.01e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 448259607 1 LFMCAGSMIHNLKDSqDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 58
Cdd:PRK12668 308 LFMSAGAVLYRTGTE-KLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
1-59 |
4.05e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 40.41 E-value: 4.05e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 448259607 1 LFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 59
Cdd:PRK12650 340 LFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLT 397
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-96 |
5.83e-04 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 39.80 E-value: 5.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILemVCLSWLNFLIFFLYFFSTGL 80
Cdd:PRK05846 345 LFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL--LGSFQVNPVIAFIATTGLIL 421
|
90
....*....|....*.
gi 448259607 81 TASYSFRLFYYSMSGD 96
Cdd:PRK05846 422 AAVYSLWLYQRVMFGP 437
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
1-64 |
2.62e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 37.95 E-value: 2.62e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 448259607 1 LFMCAGSMIHNLKdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLS 64
Cdd:PRK06521 355 LFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-87 |
3.01e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 37.86 E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDL----ILEMVCLSWLNFLIFFLYFF 76
Cdd:PRK12648 339 LFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATL 417
|
90
....*....|.
gi 448259607 77 STGLTASYSFR 87
Cdd:PRK12648 418 AGAFSVAYSLR 428
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-61 |
4.53e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 37.38 E-value: 4.53e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 448259607 1 LFMCAGSMIHNLkDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMV 61
Cdd:PRK08376 367 LFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESS 426
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-90 |
5.26e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 37.10 E-value: 5.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259607 1 LFMCAGSmIHNLKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEMVCLS---WLNFLIFFLYFFS 77
Cdd:PRK06589 348 LFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQnqpWLSIIVMLVVIAS 426
|
90
....*....|...
gi 448259607 78 TGLTASYSFRLFY 90
Cdd:PRK06589 427 SILSALYLLKILS 439
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-59 |
6.37e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 36.82 E-value: 6.37e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 448259607 1 LFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 59
Cdd:PRK12647 327 LFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYE 384
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
1-59 |
6.37e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 37.04 E-value: 6.37e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 448259607 1 LFMCAGSMIHNlKDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 59
Cdd:PRK12646 356 LFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLD 413
|
|
|