|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-194 |
3.52e-140 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 394.92 E-value: 3.52e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 80
Cdd:MTH00156 80 FFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFS 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 81 VDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIYPYL 160
Cdd:MTH00156 160 VDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYL 239
|
170 180 190
....*....|....*....|....*....|....
gi 448259587 161 LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00156 240 LGDPENFIPANPLVTPVHIQPEWYFLFAYAILRS 273
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-194 |
9.32e-71 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 219.66 E-value: 9.32e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGG 78
Cdd:COG1290 99 FFAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGG 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 79 FAVDNATLNRFFTFH-FVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEK----IPFHPYFTFKDSITFVLMTSLLIML 153
Cdd:COG1290 179 EFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFALL 258
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 448259587 154 CLIYPylLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:COG1290 259 AFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRA 297
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-117 |
6.56e-48 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 155.22 E-value: 6.56e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGG 78
Cdd:cd00284 82 FFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGG 161
|
90 100 110
....*....|....*....|....*....|....*....
gi 448259587 79 FAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSN 117
Cdd:cd00284 162 FSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
1-164 |
2.26e-46 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 150.08 E-value: 2.26e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGG 78
Cdd:pfam13631 3 FIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLFGG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 79 FAVDNATLNRFFTFHF-VLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIY 157
Cdd:pfam13631 83 PFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQIN 162
|
....*..
gi 448259587 158 PYLLGDP 164
Cdd:pfam13631 163 PIWLGGP 169
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-194 |
3.52e-140 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 394.92 E-value: 3.52e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 80
Cdd:MTH00156 80 FFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFS 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 81 VDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIYPYL 160
Cdd:MTH00156 160 VDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYL 239
|
170 180 190
....*....|....*....|....*....|....
gi 448259587 161 LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00156 240 LGDPENFIPANPLVTPVHIQPEWYFLFAYAILRS 273
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-194 |
1.80e-125 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 358.44 E-value: 1.80e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 80
Cdd:MTH00119 91 FFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFS 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 81 VDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIYPYL 160
Cdd:MTH00119 171 VDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNL 250
|
170 180 190
....*....|....*....|....*....|....
gi 448259587 161 LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00119 251 LGDPENFTPANPLVTPPHIKPEWYFLFAYAILRS 284
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-194 |
5.03e-124 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 354.60 E-value: 5.03e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 80
Cdd:MTH00145 91 FFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFS 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 81 VDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIYPYL 160
Cdd:MTH00145 171 VGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNL 250
|
170 180 190
....*....|....*....|....*....|....
gi 448259587 161 LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00145 251 LGDPENFIPANPMVTPVHIQPEWYFLFAYAILRS 284
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-194 |
6.07e-123 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 352.06 E-value: 6.07e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 80
Cdd:MTH00074 91 FFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFS 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 81 VDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIYPYL 160
Cdd:MTH00074 171 VDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNL 250
|
170 180 190
....*....|....*....|....*....|....
gi 448259587 161 LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00074 251 LGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRS 284
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-194 |
7.81e-123 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 351.14 E-value: 7.81e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 80
Cdd:MTH00191 87 FFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFS 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 81 VDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIYPYL 160
Cdd:MTH00191 167 VDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNL 246
|
170 180 190
....*....|....*....|....*....|....
gi 448259587 161 LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00191 247 LGDPENFIPANPLVTPVHIKPEWYFLFAYAILRS 280
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-194 |
4.73e-121 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 347.41 E-value: 4.73e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 80
Cdd:MTH00131 90 FFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFS 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 81 VDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIYPYL 160
Cdd:MTH00131 170 VDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNL 249
|
170 180 190
....*....|....*....|....*....|....
gi 448259587 161 LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00131 250 LGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRS 283
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-194 |
3.45e-120 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 345.08 E-value: 3.45e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 80
Cdd:MTH00100 90 FFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFS 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 81 VDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIYPYL 160
Cdd:MTH00100 170 VDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDL 249
|
170 180 190
....*....|....*....|....*....|....
gi 448259587 161 LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00100 250 LGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRS 283
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-194 |
2.32e-114 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 330.10 E-value: 2.32e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 80
Cdd:MTH00016 91 FFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFS 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 81 VDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIYPYL 160
Cdd:MTH00016 171 VDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNI 250
|
170 180 190
....*....|....*....|....*....|....
gi 448259587 161 LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00016 251 LGDPENFIPANPLVTPTHIKPEWYFLWAYAILRS 284
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-194 |
7.08e-110 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 318.96 E-value: 7.08e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 80
Cdd:MTH00034 90 FFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFS 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 81 VDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIYPYL 160
Cdd:MTH00034 170 VDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTA 249
|
170 180 190
....*....|....*....|....*....|....
gi 448259587 161 LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00034 250 LNDPENFIPANPLVTPPHIQPEWYFLFAYAILRS 283
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-194 |
3.56e-97 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 286.82 E-value: 3.56e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 80
Cdd:MTH00224 91 FFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFA 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 81 VDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIYPYL 160
Cdd:MTH00224 171 VDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNL 250
|
170 180 190
....*....|....*....|....*....|....
gi 448259587 161 LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00224 251 FTDPENFLMANPLVTPIHIKPEWYFLWMYAILRS 284
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-194 |
1.01e-96 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 285.44 E-value: 1.01e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 80
Cdd:MTH00022 89 FFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFS 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 81 VDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIYPYL 160
Cdd:MTH00022 169 VSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNL 248
|
170 180 190
....*....|....*....|....*....|....
gi 448259587 161 LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00022 249 LGDPENFIQANSLVTPVHIQPEWYFLFAYAILRS 282
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-194 |
7.84e-93 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 275.43 E-value: 7.84e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 80
Cdd:MTH00053 91 FFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFS 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 81 VDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIYPYL 160
Cdd:MTH00053 171 VSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYS 250
|
170 180 190
....*....|....*....|....*....|....
gi 448259587 161 LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00053 251 LGDAENFKQANPLVTPVHIKPEWYFLFAYAILRS 284
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-194 |
1.27e-72 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 223.28 E-value: 1.27e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 80
Cdd:MTH00086 79 FFIFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFG 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 81 VDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTsLLIMLCLIYPYL 160
Cdd:MTH00086 159 VSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWL-VFIIFSLFYPFN 237
|
170 180 190
....*....|....*....|....*....|....
gi 448259587 161 LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00086 238 LGDPEMFIEADPMMSPVHIVPEWYFLFAYAILRA 271
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
1-194 |
5.02e-71 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 220.19 E-value: 5.02e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 80
Cdd:MTH00033 87 FFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFS 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 81 VDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCL--IYP 158
Cdd:MTH00033 167 VSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIepRIE 246
|
170 180 190
....*....|....*....|....*....|....*.
gi 448259587 159 YLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00033 247 TLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRS 282
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-194 |
9.32e-71 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 219.66 E-value: 9.32e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGG 78
Cdd:COG1290 99 FFAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGG 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 79 FAVDNATLNRFFTFH-FVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEK----IPFHPYFTFKDSITFVLMTSLLIML 153
Cdd:COG1290 179 EFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFALL 258
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 448259587 154 CLIYPylLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:COG1290 259 AFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRA 297
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
2-194 |
4.40e-57 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 183.26 E-value: 4.40e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 2 FICIYLHVGRGIYYGSYMYMHTWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAV 81
Cdd:MTH00046 82 FILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSV 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 82 DNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNI-EKIPFHPYFTFKDSITFVLMTSLLIMLCLIYPYL 160
Cdd:MTH00046 162 TGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDL 241
|
170 180 190
....*....|....*....|....*....|....
gi 448259587 161 LGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:MTH00046 242 VLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRS 275
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-117 |
6.56e-48 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 155.22 E-value: 6.56e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGG 78
Cdd:cd00284 82 FFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGG 161
|
90 100 110
....*....|....*....|....*....|....*....
gi 448259587 79 FAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTGSN 117
Cdd:cd00284 162 FSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
1-164 |
2.26e-46 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 150.08 E-value: 2.26e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGG 78
Cdd:pfam13631 3 FIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLFGG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 79 FAVDNATLNRFFTFHF-VLPFMIAAMAAIHLFFLHQTGSNNPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIY 157
Cdd:pfam13631 83 PFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQIN 162
|
....*..
gi 448259587 158 PYLLGDP 164
Cdd:pfam13631 163 PIWLGGP 169
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-115 |
9.72e-45 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 146.76 E-value: 9.72e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 1 FFICIYLHVGRGIYYGSYMYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGG 78
Cdd:pfam00033 73 FFLMLYLHIFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGS 152
|
90 100 110
....*....|....*....|....*....|....*..
gi 448259587 79 FAVDNATLNRFFTFHFVLPFMIAAMAAIHLFFLHQTG 115
Cdd:pfam00033 153 FSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
118-194 |
2.22e-24 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 93.09 E-value: 2.22e-24
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 448259587 118 NPLGLNGNIEKIPFHPYFTFKDSITFVLMTSLLIMLCLIYPYLLGDPDNFVPANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRA 77
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
5-120 |
2.76e-17 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 76.29 E-value: 2.76e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 5 IYLHVGRGIYYGSYMYMH--TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVD 82
Cdd:PRK03735 105 MFLHTLRVFFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVG 184
|
90 100 110
....*....|....*....|....*....|....*....
gi 448259587 83 NATLNRFFTFH-FVLPFMIAAMAAIHLFFLHQTGSNNPL 120
Cdd:PRK03735 185 AQTLTRFFAIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
23-120 |
5.57e-14 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 67.44 E-value: 5.57e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 448259587 23 TWMIGTVILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFTFH-FVLPFMIA 101
Cdd:CHL00070 117 TWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLTA 196
|
90
....*....|....*....
gi 448259587 102 AMAAIHLFFLHQTGSNNPL 120
Cdd:CHL00070 197 VFMLMHFLMIRKQGISGPL 215
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
169-194 |
4.36e-11 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 57.10 E-value: 4.36e-11
10 20
....*....|....*....|....*.
gi 448259587 169 PANPLVTPVHIQPEWYFLFAYAILRS 194
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRS 26
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
148-193 |
1.20e-03 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 37.67 E-value: 1.20e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 448259587 148 SLLIMLCLIYPYLLGDPdnfvpANPLVTPVHIQPEWYFLFAYAILR 193
Cdd:CHL00058 49 ACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILR 89
|
|
|