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Conserved domains on  [gi|446940555|ref|WP_001017811|]
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MULTISPECIES: HK97-gp10 family putative phage morphogenesis protein [Bacilli]

Protein Classification

HK97 gp10 family phage protein( domain architecture ID 10019845)

HK97 gp10 family phage protein similar to Bacillus subtilis phage-like element PBSX protein XkdI

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
phge_HK97_gp10 TIGR01725
phage protein, HK97 gp10 family; This model represents an uncharacterized, highly divergent ...
 3-115 4.46e-30

phage protein, HK97 gp10 family; This model represents an uncharacterized, highly divergent bacteriophage family. The family includes gp10 from HK022 and HK97. It appears related to TIGR01635, a phage morphogenesis family believed to be involved in tail completion. [Mobile and extrachromosomal element functions, Prophage functions]


:

Pssm-ID: 273775  Cd Length: 119  Bit Score: 104.04  E-value: 4.46e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446940555    3 IDGLDALLNQFHDMKNNIDD-DVDDTLQEKAKeyVVRAKLKAREVMNKGYWTGNLSRNIRYKK-TGDLQYTITSH--AAY 78
Cdd:TIGR01725   1 FTGLDELLQKLEKLGKKVDKeKVRKALKAGAN--VIRAKLKSNAPVSKGKKHGSLRDSIVKQKdNGVLSVTVGPGktAWY 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 446940555   79 SGFLEFGTRYMEAEPFMWPVYEV----IRKSTVEELKALFE 115
Cdd:TIGR01725  79 ARFLEFGTRYMPAQPFMRPAFKQnkpkVIKIMIEELEALIK 119
 
Name Accession Description Interval E-value
phge_HK97_gp10 TIGR01725
phage protein, HK97 gp10 family; This model represents an uncharacterized, highly divergent ...
 3-115 4.46e-30

phage protein, HK97 gp10 family; This model represents an uncharacterized, highly divergent bacteriophage family. The family includes gp10 from HK022 and HK97. It appears related to TIGR01635, a phage morphogenesis family believed to be involved in tail completion. [Mobile and extrachromosomal element functions, Prophage functions]


Pssm-ID: 273775  Cd Length: 119  Bit Score: 104.04  E-value: 4.46e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446940555    3 IDGLDALLNQFHDMKNNIDD-DVDDTLQEKAKeyVVRAKLKAREVMNKGYWTGNLSRNIRYKK-TGDLQYTITSH--AAY 78
Cdd:TIGR01725   1 FTGLDELLQKLEKLGKKVDKeKVRKALKAGAN--VIRAKLKSNAPVSKGKKHGSLRDSIVKQKdNGVLSVTVGPGktAWY 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 446940555   79 SGFLEFGTRYMEAEPFMWPVYEV----IRKSTVEELKALFE 115
Cdd:TIGR01725  79 ARFLEFGTRYMPAQPFMRPAFKQnkpkVIKIMIEELEALIK 119
HK97-gp10_like pfam04883
Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the ...
 7-85 5.61e-08

Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the caudovirales. It may be a tail component.


Pssm-ID: 428172  Cd Length: 80  Bit Score: 46.56  E-value: 5.61e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446940555    7 DALLNQFHDMKNNIDDDVDDTLQEKAKEYVVRAKLKARevmnkGYWTGNLSRNIRY------KKTGDLQYTITSHAAYSG 80
Cdd:pfam04883   1 DKLIKKLEKLSKVAEKAAKKALKAAAAEVADEAKKNAP-----VDTTGKLRDSIKVgvnlvkEKGGELVVEVGSNAEYAH 75


                  ....*
gi 446940555   81 FLEFG 85
Cdd:pfam04883  76 LVEFG 80
 
Name Accession Description Interval E-value
phge_HK97_gp10 TIGR01725
phage protein, HK97 gp10 family; This model represents an uncharacterized, highly divergent ...
 3-115 4.46e-30

phage protein, HK97 gp10 family; This model represents an uncharacterized, highly divergent bacteriophage family. The family includes gp10 from HK022 and HK97. It appears related to TIGR01635, a phage morphogenesis family believed to be involved in tail completion. [Mobile and extrachromosomal element functions, Prophage functions]


Pssm-ID: 273775  Cd Length: 119  Bit Score: 104.04  E-value: 4.46e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446940555    3 IDGLDALLNQFHDMKNNIDD-DVDDTLQEKAKeyVVRAKLKAREVMNKGYWTGNLSRNIRYKK-TGDLQYTITSH--AAY 78
Cdd:TIGR01725   1 FTGLDELLQKLEKLGKKVDKeKVRKALKAGAN--VIRAKLKSNAPVSKGKKHGSLRDSIVKQKdNGVLSVTVGPGktAWY 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 446940555   79 SGFLEFGTRYMEAEPFMWPVYEV----IRKSTVEELKALFE 115
Cdd:TIGR01725  79 ARFLEFGTRYMPAQPFMRPAFKQnkpkVIKIMIEELEALIK 119
HK97-gp10_like pfam04883
Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the ...
 7-85 5.61e-08

Bacteriophage HK97-gp10, putative tail-component; This family of proteins is found in the caudovirales. It may be a tail component.


Pssm-ID: 428172  Cd Length: 80  Bit Score: 46.56  E-value: 5.61e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446940555    7 DALLNQFHDMKNNIDDDVDDTLQEKAKEYVVRAKLKARevmnkGYWTGNLSRNIRY------KKTGDLQYTITSHAAYSG 80
Cdd:pfam04883   1 DKLIKKLEKLSKVAEKAAKKALKAAAAEVADEAKKNAP-----VDTTGKLRDSIKVgvnlvkEKGGELVVEVGSNAEYAH 75


                  ....*
gi 446940555   81 FLEFG 85
Cdd:pfam04883  76 LVEFG 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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