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Conserved domains on  [gi|446916130|ref|WP_000993386|]
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MULTISPECIES: broad-spectrum mercury transporter MerE [Bacteria]

Protein Classification

PRK13747 family protein( domain architecture ID 10014400)

PRK13747 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK13747 PRK13747
putative mercury resistance protein; Provisional
 1-78 1.08e-44

putative mercury resistance protein; Provisional


:

Pssm-ID: 184297  Cd Length: 78  Bit Score: 138.09  E-value: 1.08e-44
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446916130  1 MNAPDKLPPETRQPVSGYLWGALAVLTCPCHLPILAAVLAGTTAGAFLGEHWGVAALALTGLFVLAVTRLLRAFRGGS 78
Cdd:PRK13747  1 MNSPERLPSETHKPITGYLWGALAVLTCPCHLPILAAVLAGTTAGAFLGEHWGIAALTLTGLFVLSVTRLLRAFRGRS 78
 
Name Accession Description Interval E-value
PRK13747 PRK13747
putative mercury resistance protein; Provisional
 1-78 1.08e-44

putative mercury resistance protein; Provisional


Pssm-ID: 184297  Cd Length: 78  Bit Score: 138.09  E-value: 1.08e-44
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446916130  1 MNAPDKLPPETRQPVSGYLWGALAVLTCPCHLPILAAVLAGTTAGAFLGEHWGVAALALTGLFVLAVTRLLRAFRGGS 78
Cdd:PRK13747  1 MNSPERLPSETHKPITGYLWGALAVLTCPCHLPILAAVLAGTTAGAFLGEHWGIAALTLTGLFVLSVTRLLRAFRGRS 78
MerE pfam05052
MerE protein; The prokaryotic MerE (or URF-1) protein is part of the mercury resistance operon. ...
 1-75 1.13e-36

MerE protein; The prokaryotic MerE (or URF-1) protein is part of the mercury resistance operon. The protein is thought not to have any direct role in conferring mercury resistance to the organizm but may be a mercury resistance transposon.


Pssm-ID: 309965  Cd Length: 75  Bit Score: 117.69  E-value: 1.13e-36
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446916130   1 MNAPDKLPPETRQPVSGYLWGALAVLTCPCHLPILAAVLAGTTAGAFLGEHWGVAALALTGLFVLAVTRLLRAFR 75
Cdd:pfam05052  1 MNSPEREPTETHKPRTGYLWGALAVLTCPCHLPILAIVLAGTTAGAFLGEHWVIAAIALTGLFVLSLARLLRAFK 75
 
Name Accession Description Interval E-value
PRK13747 PRK13747
putative mercury resistance protein; Provisional
 1-78 1.08e-44

putative mercury resistance protein; Provisional


Pssm-ID: 184297  Cd Length: 78  Bit Score: 138.09  E-value: 1.08e-44
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446916130  1 MNAPDKLPPETRQPVSGYLWGALAVLTCPCHLPILAAVLAGTTAGAFLGEHWGVAALALTGLFVLAVTRLLRAFRGGS 78
Cdd:PRK13747  1 MNSPERLPSETHKPITGYLWGALAVLTCPCHLPILAAVLAGTTAGAFLGEHWGIAALTLTGLFVLSVTRLLRAFRGRS 78
MerE pfam05052
MerE protein; The prokaryotic MerE (or URF-1) protein is part of the mercury resistance operon. ...
 1-75 1.13e-36

MerE protein; The prokaryotic MerE (or URF-1) protein is part of the mercury resistance operon. The protein is thought not to have any direct role in conferring mercury resistance to the organizm but may be a mercury resistance transposon.


Pssm-ID: 309965  Cd Length: 75  Bit Score: 117.69  E-value: 1.13e-36
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446916130   1 MNAPDKLPPETRQPVSGYLWGALAVLTCPCHLPILAAVLAGTTAGAFLGEHWGVAALALTGLFVLAVTRLLRAFR 75
Cdd:pfam05052  1 MNSPEREPTETHKPRTGYLWGALAVLTCPCHLPILAIVLAGTTAGAFLGEHWVIAAIALTGLFVLSLARLLRAFK 75
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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