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Conserved domains on  [gi|446911108|ref|WP_000988364|]
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MULTISPECIES: type 1 fimbria chaperone FimC [Gammaproteobacteria]

Protein Classification

type 1 fimbriae chaperone FimC( domain architecture ID 11487688)

type 1 fimbriae chaperone FimC is part of the fimbrial operon and required for the biogenesis of type 1 fimbriae

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15195 PRK15195
molecular chaperone FimC;
1-229 1.15e-155

molecular chaperone FimC;


:

Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 430.82  E-value: 1.15e-155
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   1 MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLF 80
Cdd:PRK15195   1 MMTKIKLGMIIIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKSFIVTPPLF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  81 VSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSR 160
Cdd:PRK15195  81 VSEPKSENTLRIIYAGPPLAADRESLFWMNVKAIPSVDKNALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSR 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446911108 161 SGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNL 229
Cdd:PRK15195 161 SGNHLKVHNPSPYYVTLVNLQVGSQKLGNAMIAPKVNSQIPLPSGVQGKLKFQTVNDYGAVTPAREVNL 229
 
Name Accession Description Interval E-value
PRK15195 PRK15195
molecular chaperone FimC;
1-229 1.15e-155

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 430.82  E-value: 1.15e-155
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   1 MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLF 80
Cdd:PRK15195   1 MMTKIKLGMIIIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKSFIVTPPLF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  81 VSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSR 160
Cdd:PRK15195  81 VSEPKSENTLRIIYAGPPLAADRESLFWMNVKAIPSVDKNALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSR 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446911108 161 SGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNL 229
Cdd:PRK15195 161 SGNHLKVHNPSPYYVTLVNLQVGSQKLGNAMIAPKVNSQIPLPSGVQGKLKFQTVNDYGAVTPAREVNL 229
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-224 4.91e-72

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 219.09  E-value: 4.91e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   1 MMTKIKLLMLIIFYLIISASAHAagGIALGATRIIYPADAKQTAVWIRNShTNERFLVNSWIEN-----SSGVKEKSFII 75
Cdd:COG3121    1 MKRLLRLLLLALLLLLASAAAAA--GISISPTRVIYPAGDKEASLTLTNT-GDTPYLVQSWVDDwdqdaGPDKATAPFVV 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  76 TPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNAlNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDT 155
Cdd:COG3121   78 TPPLFRLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASE-EGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEK 156

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446911108 156 LKFSRSGNYINVHNPSPFYVTLVNLQVGSQ----KLGNAMAAPRVNSQIPLPSGV----QGKLKFQTVNDYGSVTPV 224
Cdd:COG3121  157 LTWSLVGNGLTVTNPGPYYVTLSDLSLGAGgkklKKGLGMVLPGSTRRWPLPAGAslaaGGKVTWATINDYGGAVPL 233
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 27-145 8.20e-44

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 143.50  E-value: 8.20e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   27 IALGATRIIYPADAKQTAVWIRNSHTNeRFLVNSWIE--NSSGVKEKS---FIITPPLFVSEPKSENTLRIIYTGPPLAA 101
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDN-PYLVQSWVDdgNEEGTDEKAkapFIVTPPLFRLEPGQEQVLRIYTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 446911108  102 DRESLFWMNVKTIPSVDKNAlNGRNVLQLAILSRMKLFLRPIQL 145
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPK-GGQNGLQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
PRK15195 PRK15195
molecular chaperone FimC;
1-229 1.15e-155

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 430.82  E-value: 1.15e-155
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   1 MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLF 80
Cdd:PRK15195   1 MMTKIKLGMIIIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKSFIVTPPLF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  81 VSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSR 160
Cdd:PRK15195  81 VSEPKSENTLRIIYAGPPLAADRESLFWMNVKAIPSVDKNALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSR 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446911108 161 SGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNL 229
Cdd:PRK15195 161 SGNHLKVHNPSPYYVTLVNLQVGSQKLGNAMIAPKVNSQIPLPSGVQGKLKFQTVNDYGAVTPAREVNL 229
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-224 4.91e-72

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 219.09  E-value: 4.91e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   1 MMTKIKLLMLIIFYLIISASAHAagGIALGATRIIYPADAKQTAVWIRNShTNERFLVNSWIEN-----SSGVKEKSFII 75
Cdd:COG3121    1 MKRLLRLLLLALLLLLASAAAAA--GISISPTRVIYPAGDKEASLTLTNT-GDTPYLVQSWVDDwdqdaGPDKATAPFVV 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  76 TPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNAlNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDT 155
Cdd:COG3121   78 TPPLFRLEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASE-EGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEK 156

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446911108 156 LKFSRSGNYINVHNPSPFYVTLVNLQVGSQ----KLGNAMAAPRVNSQIPLPSGV----QGKLKFQTVNDYGSVTPV 224
Cdd:COG3121  157 LTWSLVGNGLTVTNPGPYYVTLSDLSLGAGgkklKKGLGMVLPGSTRRWPLPAGAslaaGGKVTWATINDYGGAVPL 233
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 3-225 1.96e-64

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 199.60  E-value: 1.96e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   3 TKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVS 82
Cdd:PRK15188   5 VPIFLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPPLFVI 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  83 EPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGrNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSG 162
Cdd:PRK15188  85 QPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTG-NSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNER 163

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446911108 163 NYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRvnSQIPLPSgVQGKLKFQTVNDYGSVTPVR 225
Cdd:PRK15188 164 GQLTITNPSPYYVSMVELYSAGKKLPNTMVPPK--GAITLPA-TPGQVSLRTVNDFGATTPAR 223
PRK15208 PRK15208
molecular chaperone LpfB;
5-220 2.57e-53

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 171.25  E-value: 2.57e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   5 IKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEP 84
Cdd:PRK15208   1 MRLISFTALALALIAQNSFAGGVALSSTRVIYDGSKKEASLTVNNKSKTEEFLIQSWIDDANGNKKTPFIITPPLFKLDP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  85 KSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNAlNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNY 164
Cdd:PRK15208  81 TKNNVLRIVNITNTLPQDRESVYWINVKAIPAKSEDA-ENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFTRAGNQ 159

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446911108 165 INVHNPSPFYVTLVNLQVGSQKL---GNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGS 220
Cdd:PRK15208 160 IKVENPSAFNLTFNQFYANGRDIekaGMVPAKGSLNIELPAGTGKVSEVKYNIINDFGT 218
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 15-223 8.54e-47

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 154.55  E-value: 8.54e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  15 LIISASAHAAGgIALGATRIIYPADAKQTAVWIRNShTNERFLVNSW---IENSSGVKEKSFIITPPLFVSEPKSENTLR 91
Cdd:PRK15299  13 LLCGSLAHAAG-INIGTTRVIFHGDAKDASISISNS-DNVPYLIQSWaqsISETGASGDAPFMVTPPLFRLNGGQKNVLR 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  92 IIYTGPPLAADRESLFWMNVKTIPSvdKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPS 171
Cdd:PRK15299  91 IIRTGGNLPEDRESLYWLDIKSIPS--SNPDNKHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGRTLTVKNPT 168

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 446911108 172 PFYVTLVNLQVGSQKL-GNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTP 223
Cdd:PRK15299 169 PYYMNFATLSVGSQKVkAPRYVAPFGNAQYTLPAAASGPIAWSIINDFGGTGP 221
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 27-145 8.20e-44

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 143.50  E-value: 8.20e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   27 IALGATRIIYPADAKQTAVWIRNSHTNeRFLVNSWIE--NSSGVKEKS---FIITPPLFVSEPKSENTLRIIYTGPPLAA 101
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDN-PYLVQSWVDdgNEEGTDEKAkapFIVTPPLFRLEPGQEQVLRIYTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 446911108  102 DRESLFWMNVKTIPSVDKNAlNGRNVLQLAILSRMKLFLRPIQL 145
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPK-GGQNGLQLALRSRIKLFYRPAGL 122
PRK09926 PRK09926
fimbrial chaperone;
1-219 3.09e-42

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 143.32  E-value: 3.09e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   1 MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNErFLVNSWIENSSGVKEKS-----FII 75
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNP-LLVQSWLDTGDDNAEPGsikvpFTA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  76 TPPLFVSEPKSENTLRIIYTG-PPLAADRESLFWMNVKTIP-SVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAP 153
Cdd:PRK09926  80 TPPVSRIDPKRGQTIKLMYTAsTALPKDRESVFWFNVLEVPpKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAP 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446911108 154 DTLKFS--RSGNYI--NVHNPSPFYVTL--VNLQVGSQK--LGNAMAAPRVNSQIPLP----SGVQGKLKFQTVNDYG 219
Cdd:PRK09926 160 LALKWSwaGSEGKAslRVTNPTPYYVSFssGDLEAGGKRypVDSKMIAPFSDESMKVKglsgKASSGKVHFYAINDFG 237
PRK15295 PRK15295
fimbrial assembly chaperone;
10-219 2.29e-39

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 135.46  E-value: 2.29e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  10 LIIFYLIISASAHAA-GGIALGATRIIYPADAKQTAVWIRNSHTNERfLVNSWIE--NSSGVKEKSFIITPPLFVSEPKS 86
Cdd:PRK15295   3 IKKSVLVVLLTSHVAhASIVVGGTRLVFDGNNDESSINVENKDSKAN-LVQSWLSvvDPQVTNKQAFIITPPLFRLDAGQ 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  87 ENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNAlnGRNVLQLAILSRMKLFLRPIQLQ-ELPAEAPDTLKFSRSGNYI 165
Cdd:PRK15295  82 KNSIRVIRSGAPLPADRESMYWLNIKGIPSIDDNA--SANRVEISINTQIKLIYRPPALTkSTPDSQSQQLKWQTAGDVI 159

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446911108 166 NVHNPSPFYVTLVNLQVGSQKLGNA-MAAPRVNSQIPLPSGVQ--GKLKFQTVNDYG 219
Cdd:PRK15295 160 TVNNPTPYYMNFASVTLNSHEVKSAtFVPPKSSASFKLGSTAAphGTVTWRLISDYG 216
lfpB PRK15290
fimbrial chaperone;
6-225 6.66e-38

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 132.04  E-value: 6.66e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   6 KLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIE--NSSGVKEKSFIITPPLFVSE 83
Cdd:PRK15290  18 KLFTAIILSVFLGQPALTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKIPYLIQAWVDpfNKEDKSKAPFTVIPPVSRLE 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  84 PKSENTLRIIYT-GPPLAADRESLFWMNVKTIPSVDKNalNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSG 162
Cdd:PRK15290  98 PSQEKVLRIIHTkGVSLPDDRESVFWLNIKNIPPSASN--KATNSLEIAVKTRIKLFWRPASIRLIPEDAAPKVKWRREG 175

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446911108 163 NYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQG-KLKFQTVNDYGSVT-PVR 225
Cdd:PRK15290 176 RNLIAENPNPIHISVMDVIVDGHDVPLNMIRPFETLTLPLPANSAGgQMTWRFINDYGAVSdPIK 240
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
2-229 3.66e-33

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 119.81  E-value: 3.66e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   2 MTKIKLLMLIIFYLIISASAHAagGIALGATRIIYPADAKQTAVWIRNsHTNERFLVNS-------WIENSSGVKEKSFI 74
Cdd:PRK15192   1 MNKFFLRCAIYWCLLPISWAQA--GVVIGGTRFIYHAGAPALSVPVSN-HSEASWLIDThilpggrWPGTKNEGNITPFV 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  75 ITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNAlngrNVLQLAILSRMKLFLRPIQLQELPAEAPD 154
Cdd:PRK15192  78 VTPPLFMLSARQENSMRVVYTGAPLPADRESLFTLSIAAIPSGKPEA----NRVQMAFRSALKLLYRPEGLAGNPQQAYR 153

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446911108 155 TLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNA-MAAPRVNSQIP-LPSGVQGKLKFQTVNDYGSVTPVREVNL 229
Cdd:PRK15192 154 HLIWSLTPDGATVRNPTPYYVTLFLLRANERAQDNAgVVAPFATRQTDwCRHTVRCTVRWQSINDYGRVMTAQTVDL 230
PRK15211 PRK15211
fimbrial chaperone;
2-230 1.52e-32

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 118.00  E-value: 1.52e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   2 MTKIKLLMLIIFYLIISASAHAAggIALGATRIIYPADAKQTAVWIRNsHTNERFLVNSWIENSS-GVKEKSFIITPPLF 80
Cdd:PRK15211   1 NKMMKWGLVSLLSLAVCGQAMAA--FVLNGTRFIYDEGRKNISFEVTN-QADQTYGGQVWIDNTTqGSSTVYMVPAPPFF 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  81 VSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNgrNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSR 160
Cdd:PRK15211  78 KVRPKEKQIIRIMKTDSALPKDRESLFWLNVQEIPPKPKASEG--NVLAVALNTQVKLIYRPKALKEGRENAEKNLQIIH 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446911108 161 SGNYINVHNPSPFYVTLVNLQVG------SQKLGNAMAAPRVNSQIPL-PSGVQGKLKFQTVNDYGSvtpVREVNLN 230
Cdd:PRK15211 156 RGGETYLKNPTPYYFAVTGVKLNgqpvklSDRVMNEIAQLAPFSEVSLgKLSLNGTVTVQAVNDWGG---TQDYTLK 229
PRK15249 PRK15249
fimbrial chaperone;
5-220 1.07e-27

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 105.65  E-value: 1.07e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   5 IKLLMLIIFYLIisASAHAAGGIALGATRIIYPADAKQTAVWIRNshtNERF--LVNSWI---------ENSSGVkekSF 73
Cdd:PRK15249  10 LYYLIVFLFLAL--PATASWASVTILGSRIIYPSTASSVDVQLKN---NDAIpyIVQTWFddgdmntspENSSAM---PF 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  74 IITPPLFVSEPKSENTLRIIYTGP-PLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQL---QELP 149
Cdd:PRK15249  82 IATPPVFRIQPKAGQVVRVIYNNTkKLPQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMLRSRIKLFYRPDGLgkpDNLA 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108 150 AEAPDTLKFSRSGNY-INVHNPSPFYVTLVNLQV----GSQKLGNAMAAPRVNSQIPLPSGVQ-----GKLKFQTVNDYG 219
Cdd:PRK15249 162 KKLQIKTVNKGSGKSgIVIVNPQPWFASLSNLNVkvngASYNLDADMIAPFSSQTWWLPGKRSlksfsGTVTVTLVNDQG 241


                 .
gi 446911108 220 S 220
Cdd:PRK15249 242 A 242
PRK15224 PRK15224
pili assembly chaperone PapD;
20-219 4.70e-27

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 103.67  E-value: 4.70e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  20 SAHAAGGIALGATRIIYPADAKQTAVWIRNSHtNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPL 99
Cdd:PRK15224  23 LNTKSFSVKLGATRVIYHAGTAGATLSVSNPQ-NYPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTGGDM 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108 100 AADRESLFWMNVKTIP----SVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYV 175
Cdd:PRK15224 102 PTDRETLQWVCIKAVPpenePSDTQAKGATLDLNLSINVCDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYM 181

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 446911108 176 TLVNLQVGSQKL-GNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYG 219
Cdd:PRK15224 182 NLASVTVGGKPItGLEYIPPFADKTLNMPGSAHGDIEWRVITDFG 226
PRK15233 PRK15233
fimbrial chaperone SefB;
26-220 4.66e-26

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 101.34  E-value: 4.66e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  26 GIALGATRIIYPADAKQTAVWIRNSHTNErFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRES 105
Cdd:PRK15233  41 GLRLGTTRVIYKEDAPSTSFWIMNEKEYP-ILVQTQVYNDDKSSKAPFIVTPPILKVESNARTRLKVIPTSNLFNKNEES 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108 106 LFWMNVKTIPSVDKNALNGRNVL------QLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVN 179
Cdd:PRK15233 120 LYWLCVKGVPPLNDNESNNKNNIttnlnvNVVTNSCIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYVNIAN 199

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 446911108 180 LQVG--SQKLGNAMAAPRVNSQipLPSGVQGKLKFQTVNDYGS 220
Cdd:PRK15233 200 IKSGnlSFNIPNGYIEPFGYAQ--LPGGVHSKITLTILDDNGA 240
PRK11385 PRK11385
fimbrial chaperone;
4-229 6.33e-26

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 100.59  E-value: 6.33e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   4 KIKLLMLIIFYLIISASAHAagGIALGATRIIYPADAKQTAVWIRNShTNERFLVNS-------WIENSSGVKEKSFIIT 76
Cdd:PRK11385   7 RLALLIFAVLSLLVAGELQA--GVVVGGTRFIFPADRESISILLTNT-SQESWLINSkinrptrWAGGEASTVPAPLLAA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  77 PPLFVSEPKSENTLRIIYTGPP-LAADRESLFWMNVKTIPSvdkNALNGRNVlQLAILSRMKLFLRPIQLQELPAEAPDT 155
Cdd:PRK11385  84 PPLILLKPGTTGTLRLLRTESDiLPVDRETLFELSIASVPS---GKVENQSV-KVAMRSVFKLFWRPEGLPGDPLEAYQQ 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446911108 156 LKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNA-MAAPRVNSQIPLPSGVQG-KLKFQTVNDYGSVTPVREVNL 229
Cdd:PRK11385 160 LRWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNAgVVPPKSQRQTSWCQAIAPcHVAWRAINDYGGLSAKKEQNL 235
PRK15285 PRK15285
fimbrial chaperone StfD;
1-224 5.05e-24

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 96.00  E-value: 5.05e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   1 MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKS-FIITPPL 79
Cdd:PRK15285   1 MMPLKRYNLAAVLLLLLGGYGSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSpLIVVPPV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  80 FVSEPKSENTLRIiyTGPP----LAADRESLFWMNVKTIPSVDKNAlngrNVLQLAILSRMKLFLRPIQLQELPAEAPDT 155
Cdd:PRK15285  81 QRIEPSAIGQVKI--QGMPalasLPQDRETLFYYNVREIPPQSDKP----NTLQIALQTRIKVFYRPQALSKIDMQHPWQ 154

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446911108 156 LKFS--RSGNYINVHNPSPFYVTLVNLQ-----VGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQT-VNDYGSVTPV 224
Cdd:PRK15285 155 YKITlqRQGNGYQVSNPTGYYVVLSNASnrmdgTPARGFSPLVIAPKSNVTLGGDASELGHSPVLTyVNDYGARLPL 231
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 10-177 9.51e-24

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 95.23  E-value: 9.51e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  10 LIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENT 89
Cdd:PRK15254   1 VILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKSQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  90 LRIIYT---GPPLAADRESLFWMNVKTIPSVDKNalngRNVLQLAILSRMKLFLRPIQLQELPAEAPD-TLKFSRSGNYI 165
Cdd:PRK15254  81 VRITQVrglTDKLPQDRETLFWFNVRGVPPKPED----DNVLQLAMQSQLKLFYRPKAIIRSSSDQPErKLTAERNAGHL 156

                        170
                 ....*....|..
gi 446911108 166 NVHNPSPFYVTL 177
Cdd:PRK15254 157 TLRNPTPYYITV 168
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 5-220 3.10e-23

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 93.96  E-value: 3.10e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   5 IKLLMLIIFYLIIsASAHAagGIALGATRIIYPADAKQTAVWIRNsHTNERFLVNSWIE--NSSGVKEK---SFIITPPL 79
Cdd:PRK15253  16 MKILSAVLLSAII-LPAHA--GIVIYGTRVIYPAEKKEVVVQLVN-QGEQASLVQSWIDdgNTSLPPEKiqvPFMLTPPV 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  80 FVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTI-PSVDKNAlnGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKF 158
Cdd:PRK15253  92 ARVAAESGQQIKIKKMPNSLPDNKESLFYLNVLDIpPNSQENA--GKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGL 169

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446911108 159 SRSGNYINVHNPSPFYVTLVNLQVGSQKLGNA--MAAPRVNSQIPLPSGVQGKLKFQTVNDYGS 220
Cdd:PRK15253 170 FRSNKTVIMKNDTANWITVTDVKAGNTKINDQtiMLPPLSTQNINMKYASTSQYEVTIIDDNGN 233
PRK15218 PRK15218
fimbrial assembly chaperone;
11-185 1.22e-21

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 89.27  E-value: 1.22e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  11 IIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERfLVNSWIEN--SSGVKEK---SFIITPPLFVSEPK 85
Cdd:PRK15218   4 MIALCLACAAMPAWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSS-LIQAWIDNgdTSLPPEKlqvPFIMTPPVIRVAAN 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  86 SENTLRIIYTGPPLAADRESLFWMNVKTIPSvDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYI 165
Cdd:PRK15218  83 SGQQLKIKKLANNLPGDRESLFYLNVLDIPP-NSDENKDKNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRAPGSI 161

                        170       180
                 ....*....|....*....|
gi 446911108 166 NVHNPSPFYVTLVNLQVGSQ 185
Cdd:PRK15218 162 SVKNNSANWITIPEIKAKSK 181
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 11-219 2.27e-20

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 86.37  E-value: 2.27e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  11 IIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKE-KSFIITPPLFVSEPKSENT 89
Cdd:PRK15274  12 LIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDtRYFTALPPLQRIEPKSDGQ 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  90 LRI--IYTGPPLAADRESLFWMNVKTIPSVDKNAlngrNVLQLAILSRMKLFLRPIQL-QELPAEAP--DTLKFSRSGNY 164
Cdd:PRK15274  92 VKVqpLPAAASLPQDRESLFYFNVREIPPKSDKP----NTLQLALQTRIKFFYRPVAVaRQVDKTHPwqTKLTLTYQGDG 167

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446911108 165 INVHNPSPFYVTLVNlqVGSQK------LGNAMAAPRVNSQIPLPSGVQGKLK-FQTVNDYG 219
Cdd:PRK15274 168 VIFDNPTPFYLVISN--AGSKEnetasgFKNLLIAPREKVTSPIKGASLGSSPvVGYVDDYG 227
PRK15246 PRK15246
fimbrial assembly chaperone;
32-220 5.94e-20

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 85.01  E-value: 5.94e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  32 TRIIYPADAKQTAVWIRNSHTNErFLVNSW-----IENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTG-PPLAADRES 105
Cdd:PRK15246  17 TRIIFASDDVAQSLTLSNDNTTP-MLLQVWtdagnIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLSSrQQLATDRES 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108 106 LFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQ 185
Cdd:PRK15246  96 LFWLNIYQIPPVTQDIKNHPRKLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVNPTSWYMSLTLTMDNKK 175

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 446911108 186 KLGNAMAAPRVNSQIPLPSGVQG--KLKFQTVNDYGS 220
Cdd:PRK15246 176 SIGDIMVAPKTALDVPLTRSPTPgaSINYAVINDSGN 212
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 167-223 1.23e-09

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 52.65  E-value: 1.23e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446911108  167 VHNPSPFYVTLVNLQVGSQK----LGNAMAAPR--VNSQIPLPSGVQGKLKFQTVNDYGSVTP 223
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGkelaLDPGMVAPFssQTFAGLPAPAAGGTVSYTYINDYGGIVP 63
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 2-177 1.84e-08

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 53.12  E-value: 1.84e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108   2 MTKIKLLMLIIFYLII-SASAHAAGGIALGATRIIYPADAkQTAVWIRNSHTNERFLVNSwIENSSGVKEKSFIITPPLF 80
Cdd:PRK09918   1 NRFNLFFLFTALVLLSsSSAVHAAGMVPETSVVIVEESDG-EGSINVKNTDSNPILLYTT-LVDLPEDKSKLLLVTPPVA 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446911108  81 VSEPKSENTLRIIYT-GPPLaaDRESLFWMNVKTIPSVDKnalnGRNVLQLAILSRMKLFLRPIQLQElpAEAP-DTLKF 158
Cdd:PRK09918  79 RVEPGQSQQVRFILKsGSPL--NTEHLLRVSFEGVPPKPG----GKNKVVMPIRQDLPVLIQPAALPV--VRDPwKLLVW 150

                        170
                 ....*....|....*....
gi 446911108 159 SRSGNYINVHNPSPFYVTL 177
Cdd:PRK09918 151 SISGNNLVVSNPSPYVVRL 169
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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