|
Name |
Accession |
Description |
Interval |
E-value |
| TRX_reduct |
TIGR01292 |
thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a ... |
3-308 |
7.59e-159 |
|
thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport]
Pssm-ID: 273540 [Multi-domain] Cd Length: 299 Bit Score: 445.15 E-value: 7.59e-159
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 3 DCAIIGGGPAGLSAGLYATRGGVKnAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAVQ 82
Cdd:TIGR01292 1 DVIIIGAGPAGLTAAIYAARANLK-PLLIEGMEPGGQLTTTTEVENYPGFPEGISGPELMEKMKEQAVKFGAEIIYEEVI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 83 RVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYL 162
Cdd:TIGR01292 80 KVDKSDRPFKVYTGDGKEYTAKAVIIATGASARKLGIPGEDEFWGRGVSYCATCDGPFFKNKEVAVVGGGDSAIEEALYL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 163 ANICKKVYLIHRRDGFRCAPITLEHAKNNDKIEFLTPYVVEEIKGDaSGVSSLSIKNTATNETRELIVPGFFIFVGYDVN 242
Cdd:TIGR01292 160 TRIAKKVTLVHRRDKFRAEKILLDRLKKNPKIEFLWNSTVEEIVGD-NKVEGVKIKNTVTGEEEELEVDGVFIAIGHEPN 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446486571 243 NAVLKQednsmLCKCDEYGSIVVDFSMKTDVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYL 308
Cdd:TIGR01292 239 TELLKG-----LLELDENGYIVTDEGMRTSVPGVFAAGDVRDKGYRQAVTAAGDGCIAALSAERYL 299
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
3-311 |
1.67e-139 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 396.41 E-value: 1.67e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 3 DCAIIGGGPAGLSAGLYATRGGVKnAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAVQ 82
Cdd:COG0492 2 DVVIIGAGPAGLTAAIYAARAGLK-TLVIEGGEPGGQLATTKEIENYPGFPEGISGPELAERLREQAERFGAEILLEEVT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 83 RVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYL 162
Cdd:COG0492 81 SVDKDDGPFRVTTDDGTEYEAKAVIIATGAGPRKLGLPGEEEFEGRGVSYCATCDGFFFRGKDVVVVGGGDSALEEALYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 163 ANICKKVYLIHRRDGFRCAPITLEHAKNNDKIEFLTPYVVEEIKGDaSGVSSLSIKNTATNETRELIVPGFFIFVGYDVN 242
Cdd:COG0492 161 TKFASKVTLIHRRDELRASKILVERLRANPKIEVLWNTEVTEIEGD-GRVEGVTLKNVKTGEEKELEVDGVFVAIGLKPN 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446486571 243 NAVLKQednsMLCKCDEYGSIVVDFSMKTDVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEHH 311
Cdd:COG0492 240 TELLKG----LGLELDEDGYIVVDEDMETSVPGVFAAGDVRDYKYRQAATAAGEGAIAALSAARYLEPL 304
|
|
| AhpF_homolog |
TIGR03143 |
putative alkyl hydroperoxide reductase F subunit; This family of thioredoxin reductase ... |
3-308 |
3.60e-76 |
|
putative alkyl hydroperoxide reductase F subunit; This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Pssm-ID: 132187 [Multi-domain] Cd Length: 555 Bit Score: 242.76 E-value: 3.60e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLfEKGMPGGQITGSSEIENYPGVKEVvSGLDFMQPWQEQCFRFGLKHEMTAVQ 82
Cdd:TIGR03143 6 DLIIIGGGPAGLSAGIYAGRAKLDTLII-EKDDFGGQITITSEVVNYPGILNT-TGPELMQEMRQQAQDFGVKFLQAEVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 83 RVSkkdshfviLAEDGKT-------FEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTA 155
Cdd:TIGR03143 84 DVD--------FDGDIKTiktargdYKTLAVLIATGASPRKLGFPGEEEFTGRGVAYCATCDGEFFTGMDVFVIGGGFAA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 156 VEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNDKIEFLTPYVVEEIKGDAsGVSSLSIKNTATNETRELIVP---- 231
Cdd:TIGR03143 156 AEEAVFLTRYASKVTVIVREPDFTCAKLIAEKVKNHPKIEVKFNTELKEATGDD-GLRYAKFVNNVTGEITEYKAPkdag 234
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446486571 232 --GFFIFVGYDVNNAVLKQEdnsmlCKCDEYGSIVVDFSMKTDVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYL 308
Cdd:TIGR03143 235 tfGVFVFVGYAPSSELFKGV-----VELDKRGYIPTNEDMETNVPGVYAAGDLRPKELRQVVTAVADGAIAATSAERYV 308
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
3-297 |
1.97e-63 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 202.55 E-value: 1.97e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 3 DCAIIGGGPAGLSAGLYATRGGVKNAVL-FEKGMPGGQITGSSEIENYPGVKEVVS-GLDFMQPWQEQCFRFGLKHEM-- 78
Cdd:pfam07992 2 DVVVIGGGPAGLAAALTLAQLGGKVTLIeDEGTCPYGGCVLSKALLGAAEAPEIASlWADLYKRKEEVVKKLNNGIEVll 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 79 -TAVQRVSKKDSHFVIL---AEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKE--VAVLGGG 152
Cdd:pfam07992 82 gTEVVSIDPGAKKVVLEelvDGDGETITYDRLVIATGARPRLPPIPGVELNVGFLVRTLDSAEALRLKLLPkrVVVVGGG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 153 DTAVEEAIYLANICKKVYLIHRRDGF------RCAPItLEHAKNNDKIEFLTPYVVEEIKGDASGVSslsiknTATNETR 226
Cdd:pfam07992 162 YIGVELAAALAKLGKEVTLIEALDRLlrafdeEISAA-LEKALEKNGVEVRLGTSVKEIIGDGDGVE------VILKDGT 234
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446486571 227 ELIVPGFFIFVGYDVNNAVLKQednsMLCKCDEYGSIVVDFSMKTDVQGLFAAGDIRIFAPKQVVCAASDG 297
Cdd:pfam07992 235 EIDADLVVVAIGRRPNTELLEA----AGLELDERGGIVVDEYLRTSVPGIYAAGDCRVGGPELAQNAVAQG 301
|
|
| PRK10262 |
PRK10262 |
thioredoxin reductase; Provisional |
6-309 |
6.69e-60 |
|
thioredoxin reductase; Provisional
Pssm-ID: 182343 [Multi-domain] Cd Length: 321 Bit Score: 194.12 E-value: 6.69e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 6 IIGGGPAGLSAGLYATRGGVKnAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAVQRVS 85
Cdd:PRK10262 11 ILGSGPAGYTAAVYAARANLQ-PVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVD 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 86 KKDSHFVILAEDGKtFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANI 165
Cdd:PRK10262 90 LQNRPFRLTGDSGE-YTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNI 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 166 CKKVYLIHRRDGFRCAPITLEHAKN---NDKIEFLTPYVVEEIKGDASGVSSLSIKNTA-TNETRELIVPGFFIFVGYDV 241
Cdd:PRK10262 169 ASEVHLIHRRDGFRAEKILIKRLMDkveNGNIILHTNRTLEEVTGDQMGVTGVRLRDTQnSDNIESLDVAGLFVAIGHSP 248
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446486571 242 NNAV----LKQEDNSMLCKCDEYGSivvdfSMKTDVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLE 309
Cdd:PRK10262 249 NTAIfegqLELENGYIKVQSGIHGN-----ATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLD 315
|
|
| PRK15317 |
PRK15317 |
alkyl hydroperoxide reductase subunit F; Provisional |
3-308 |
6.40e-56 |
|
alkyl hydroperoxide reductase subunit F; Provisional
Pssm-ID: 237942 [Multi-domain] Cd Length: 517 Bit Score: 188.83 E-value: 6.40e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGmpGGQITGSSEIENYPGVKEvVSGLDFMQPWQEQCFRFG--LKHEMTA 80
Cdd:PRK15317 213 DVLVVGGGPAGAAAAIYAARKGIRTGIVAERF--GGQVLDTMGIENFISVPE-TEGPKLAAALEEHVKEYDvdIMNLQRA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 81 VQRVSKKDSHFVILaEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAI 160
Cdd:PRK15317 290 SKLEPAAGLIEVEL-ANGAVLKAKTVILATGARWRNMNVPGEDEYRNKGVAYCPHCDGPLFKGKRVAVIGGGNSGVEAAI 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 161 YLANICKKVYLIHRRDGFRCAPITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNETRELIVPGFFIFVGYD 240
Cdd:PRK15317 369 DLAGIVKHVTVLEFAPELKADQVLQDKLRSLPNVTIITNAQTTEVTGDGDKVTGLTYKDRTTGEEHHLELEGVFVQIGLV 448
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 241 VNNAVLKQ--EDNsmlckcdEYGSIVVDFSMKTDVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYL 308
Cdd:PRK15317 449 PNTEWLKGtvELN-------RRGEIIVDARGATSVPGVFAAGDCTTVPYKQIIIAMGEGAKAALSAFDYL 511
|
|
| Pyr_redox_3 |
pfam13738 |
Pyridine nucleotide-disulphide oxidoreductase; |
11-280 |
1.03e-20 |
|
Pyridine nucleotide-disulphide oxidoreductase;
Pssm-ID: 404603 [Multi-domain] Cd Length: 296 Bit Score: 89.98 E-value: 1.03e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 11 PAGLSAGLYATRGGVKNAVLFEKGMPG---------------------GQITGSSEIEN-----YPGVKEVVSGLDFMQP 64
Cdd:pfam13738 1 PAGIGCAIALKKAGLEDYLILEKGNIGnsfyrypthmtffspsftsngFGIPDLNAISPgtspaFTFNREHPSGNEYAEY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 65 WQEQCFRFGLK-HEMTAVQRVSKKDSHFVILAeDGKTFEAKSVIIATG--GSPKRTGIKGESEYWGKgVSTCATcdgffY 141
Cdd:pfam13738 81 LRRVADHFELPiNLFEEVTSVKKEDDGFVVTT-SKGTYQARYVIIATGefDFPNKLGVPELPKHYSY-VKDFHP-----Y 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 142 KNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG---------FRCAPIT---LEHAKNNDKIEFLTPYVVEEIKGDA 209
Cdd:pfam13738 154 AGQKVVVIGGYNSAVDAALELVRKGARVTVLYRGSEwedrdsdpsYSLSPDTlnrLEELVKNGKIKAHFNAEVKEITEVD 233
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446486571 210 SGVsslsikNTATNETRELIVPGFFIF-VGYDVNNAVLKQednsMLCKCDEYGSIVVD-FSMKTDVQGLFAAG 280
Cdd:pfam13738 234 VSY------KVHTEDGRKVTSNDDPILaTGYHPDLSFLKK----GLFELDEDGRPVLTeETESTNVPGLFLAG 296
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
1-175 |
4.32e-16 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 77.98 E-value: 4.32e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 1 MIDCAIIGGGPAGLSAGLYATRGGVkNAVLFEKgmpGGQITGSSEIENYPGVKEVVS----GLDFMQPW--------QEQ 68
Cdd:COG2072 6 HVDVVVIGAGQAGLAAAYHLRRAGI-DFVVLEK---ADDVGGTWRDNRYPGLRLDTPshlySLPFFPNWsddpdfptGDE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 69 CF--------RFGLKHEM---TAVQRVS--KKDSHFVILAEDGKTFEAKSVIIATGG--SPKRTGIKGESEYWGKGVSTC 133
Cdd:COG2072 82 ILayleayadKFGLRRPIrfgTEVTSARwdEADGRWTVTTDDGETLTARFVVVATGPlsRPKIPDIPGLEDFAGEQLHSA 161
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 446486571 134 ATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRR 175
Cdd:COG2072 162 DWRNPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRT 203
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
5-307 |
2.66e-15 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 75.94 E-value: 2.66e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 5 AIIGGGPAGLSAGLYATRGGVKnAVLFEKG-MPGGQIT-GsseIENYPGVKEVVSG-LDFMqpwqEQC---FRFGlkhem 78
Cdd:COG0493 125 AVVGSGPAGLAAAYQLARAGHE-VTVFEALdKPGGLLRyG---IPEFRLPKDVLDReIELI----EALgveFRTN----- 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 79 TAVQR-VSKKDshfviLAEDgktFEAksVIIATG-GSPKRTGIKGESeywGKGVSTC----------ATCDGFFYKNKEV 146
Cdd:COG0493 192 VEVGKdITLDE-----LLEE---FDA--VFLATGaGKPRDLGIPGED---LKGVHSAmdfltavnlgEAPDTILAVGKRV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 147 AVLGGGDTAVE---EAIYLAniCKKVYLIHRRDgfR----CAPITLEHAKNND-KIEFLTpyVVEEIKGDASG-VSSLSI 217
Cdd:COG0493 259 VVIGGGNTAMDcarTALRLG--AESVTIVYRRT--ReempASKEEVEEALEEGvEFLFLV--APVEIIGDENGrVTGLEC 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 218 KNTATNETRE------LIVPG-FFIF--------VGYDVNNAVLKQEDNSmlcKCDEYGSIVVD-FSMKTDVQGLFAAGD 281
Cdd:COG0493 333 VRMELGEPDEsgrrrpVPIEGsEFTLpadlvilaIGQTPDPSGLEEELGL---ELDKRGTIVVDeETYQTSLPGVFAGGD 409
|
330 340
....*....|....*....|....*.
gi 446486571 282 IRiFAPKQVVCAASDGATAALSVISY 307
Cdd:COG0493 410 AV-RGPSLVVWAIAEGRKAARAIDRY 434
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
3-282 |
1.16e-13 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 70.89 E-value: 1.16e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 3 DCAIIGGGPAGLSAGLYATRGGvKNAVLFEKGMPGG------------------QITGSSEIENYpGVKEVVSGLDF--M 62
Cdd:COG1249 5 DLVVIGAGPGGYVAAIRAAQLG-LKVALVEKGRLGGtclnvgcipskallhaaeVAHEARHAAEF-GISAGAPSVDWaaL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 63 QPWQEQ---CFRFGLKHEMTA--VQRVSK----KDSHfVILAEDGKTFEAKSVIIATGGSPKRTGIKGESE--YWgkgvs 131
Cdd:COG1249 83 MARKDKvvdRLRGGVEELLKKngVDVIRGrarfVDPH-TVEVTGGETLTADHIVIATGSRPRVPPIPGLDEvrVL----- 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 132 tcaTCDGFFYKN---KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFrcAPI-------TLEHAKNNDKIEFLTPYV 201
Cdd:COG1249 157 ---TSDEALELEelpKSLVVIGGGYIGLEFAQIFARLGSEVTLVERGDRL--LPGedpeiseALEKALEKEGIDILTGAK 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 202 VEEIKGDASGVS-SLSIKNTATNETRELIvpgfFIFVGYDVNNAVLKQEDNSMlcKCDEYGSIVVDFSMKTDVQGLFAAG 280
Cdd:COG1249 232 VTSVEKTGDGVTvTLEDGGGEEAVEADKV----LVATGRRPNTDGLGLEAAGV--ELDERGGIKVDEYLRTSVPGIYAIG 305
|
..
gi 446486571 281 DI 282
Cdd:COG1249 306 DV 307
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
5-309 |
1.18e-12 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 67.90 E-value: 1.18e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 5 AIIGGGPAGLSAGLYATRGGVKnAVLFEK-GMPGG-QITGsseIENYPGVKEVVsgldfmqpwqeqcfrfglkheMTAVQ 82
Cdd:PRK11749 144 AVIGAGPAGLTAAHRLARKGYD-VTIFEArDKAGGlLRYG---IPEFRLPKDIV---------------------DREVE 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 83 RVSKKDSHFVILAEDGKTF-------EAKSVIIATG-GSPKRTGIKGESEywgKGV---------STCATCDGFFYKNKE 145
Cdd:PRK11749 199 RLLKLGVEIRTNTEVGRDItldelraGYDAVFIGTGaGLPRFLGIPGENL---GGVysavdfltrVNQAVADYDLPVGKR 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 146 VAVLGGGDTA---VEEAIYLAniCKKVYLIHRRDGfrcAPIT-----LEHAKNnDKIEFLTPYVVEEIKGDASGVSSLSI 217
Cdd:PRK11749 276 VVVIGGGNTAmdaARTAKRLG--AESVTIVYRRGR---EEMPaseeeVEHAKE-EGVEFEWLAAPVEILGDEGRVTGVEF 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 218 KNTATNE-----TRELIVPG--FFIFVgydvnNAVLK---QEDNSMLC------KCDEYGSIVVDF-SMKTDVQGLFAAG 280
Cdd:PRK11749 350 VRMELGEpdasgRRRVPIEGseFTLPA-----DLVIKaigQTPNPLILsttpglELNRWGTIIADDeTGRTSLPGVFAGG 424
|
330 340
....*....|....*....|....*....
gi 446486571 281 DIrIFAPKQVVCAASDGATAALSVISYLE 309
Cdd:PRK11749 425 DI-VTGAATVVWAVGDGKDAAEAIHEYLE 452
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
146-212 |
4.57e-12 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 60.68 E-value: 4.57e-12
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446486571 146 VAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR------CAPITLEHAKNNdKIEFLTPYVVEEIKGDASGV 212
Cdd:pfam00070 2 VVVVGGGYIGLELAGALARLGSKVTVVERRDRLLpgfdpeIAKILQEKLEKN-GIEFLLNTTVEAIEGNGDGV 73
|
|
| PRK06116 |
PRK06116 |
glutathione reductase; Validated |
88-282 |
1.23e-11 |
|
glutathione reductase; Validated
Pssm-ID: 235701 [Multi-domain] Cd Length: 450 Bit Score: 64.79 E-value: 1.23e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 88 DSHFVILaeDGKTFEAKSVIIATGGSPKRTGIKGeSEYwgkgvstCATCDGFFYKN---KEVAVLGGGDTAVEeaiyLAN 164
Cdd:PRK06116 119 DAHTVEV--NGERYTADHILIATGGRPSIPDIPG-AEY-------GITSDGFFALEelpKRVAVVGAGYIAVE----FAG 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 165 ICK----KVYLIHRRDgfrcAPI---------TLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTatnetRELIVP 231
Cdd:PRK06116 185 VLNglgsETHLFVRGD----APLrgfdpdireTLVEEMEKKGIRLHTNAVPKAVEKNADGSLTLTLEDG-----ETLTVD 255
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 446486571 232 GFFIFVGYDVNNAVLKQEDNSMlcKCDEYGSIVVDFSMKTDVQGLFAAGDI 282
Cdd:PRK06116 256 CLIWAIGREPNTDGLGLENAGV--KLNEKGYIIVDEYQNTNVPGIYAVGDV 304
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
3-282 |
3.84e-11 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 63.27 E-value: 3.84e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 3 DCAIIGGGPAGLSAGLYATRGGvKNAVLFEKGMPGG---------------------QITGSSEIenypGVKEVVSGLDF 61
Cdd:PRK06292 5 DVIVIGAGPAGYVAARRAAKLG-KKVALIEKGPLGGtclnvgcipskaliaaaeafhEAKHAEEF----GIHADGPKIDF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 62 mqpwqeqcfRFGLKHemtaVQRVSKKDSHFV------------------ILAE-----DGKTFEAKSVIIATGGspKRTG 118
Cdd:PRK06292 80 ---------KKVMAR----VRRERDRFVGGVveglekkpkidkikgtarFVDPntvevNGERIEAKNIVIATGS--RVPP 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 119 IKGESEYWGKGVstcATCDGFFYKN---KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFrcAPIT------LEHAK 189
Cdd:PRK06292 145 IPGVWLILGDRL---LTSDDAFELDklpKSLAVIGGGVIGLELGQALSRLGVKVTVFERGDRI--LPLEdpevskQAQKI 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 190 NNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNETR--ELIVPgffifVGYDVNNAVLKQEDNSMlcKCDEYGSIVVDF 267
Cdd:PRK06292 220 LSKEFKIKLGAKVTSVEKSGDEKVEELEKGGKTETIEadYVLVA-----TGRRPNTDGLGLENTGI--ELDERGRPVVDE 292
|
330
....*....|....*
gi 446486571 268 SMKTDVQGLFAAGDI 282
Cdd:PRK06292 293 HTQTSVPGIYAAGDV 307
|
|
| PRK12778 |
PRK12778 |
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ... |
2-308 |
1.40e-10 |
|
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;
Pssm-ID: 237200 [Multi-domain] Cd Length: 752 Bit Score: 62.07 E-value: 1.40e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 2 IDCAIIGGGPAGLS-AGLYATRGgvKNAVLFEK-GMPGGQITgsseienYpGVKEVVSGLDFMQPWQEQCFRFGLKHEMT 79
Cdd:PRK12778 432 KKVAVIGSGPAGLSfAGDLAKRG--YDVTVFEAlHEIGGVLK-------Y-GIPEFRLPKKIVDVEIENLKKLGVKFETD 501
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 80 AVqrVSKkdshfVILAEDGKTFEAKSVIIATG-GSPKRTGIKGE--------SEY---------WGKGVSTCATCdgffy 141
Cdd:PRK12778 502 VI--VGK-----TITIEELEEEGFKGIFIASGaGLPNFMNIPGEnsngvmssNEYltrvnlmdaASPDSDTPIKF----- 569
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 142 kNKEVAVLGGGDTAVEEAIYLANI-CKKVYLIHRRDGFRCaPITLE---HAKNnDKIEFLTPYVVEEIKGDASG-VSSLS 216
Cdd:PRK12778 570 -GKKVAVVGGGNTAMDSARTAKRLgAERVTIVYRRSEEEM-PARLEevkHAKE-EGIEFLTLHNPIEYLADEKGwVKQVV 646
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 217 IKNT------ATNETRELIVPGFFIFVGYDVNNAVLKQEDNSMLCKC------DEYGSIVVDFSMKTDVQGLFAAGDIrI 284
Cdd:PRK12778 647 LQKMelgepdASGRRRPVAIPGSTFTVDVDLVIVSVGVSPNPLVPSSipglelNRKGTIVVDEEMQSSIPGIYAGGDI-V 725
|
330 340
....*....|....*....|....
gi 446486571 285 FAPKQVVCAASDGATAALSVISYL 308
Cdd:PRK12778 726 RGGATVILAMGDGKRAAAAIDEYL 749
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
29-281 |
6.14e-10 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 59.05 E-value: 6.14e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 29 VLFEKG-MPGGQITGSSEIenYPGVKEVVSGLDFMQPwqEQCFRFG----LKHEMTAVQRVSKKdshfvILAEDGKTFEA 103
Cdd:COG0446 9 TVIEKGpHHSYQPCGLPYY--VGGGIKDPEDLLVRTP--ESFERKGidvrTGTEVTAIDPEAKT-----VTLRDGETLSY 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 104 KSVIIATGGSPKRTGIKGESEywgKGVSTCATCDGFFY--------KNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRR 175
Cdd:COG0446 80 DKLVLATGARPRPPPIPGLDL---PGVFTLRTLDDADAlrealkefKGKRAVVIGGGPIGLELAEALRKRGLKVTLVERA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 176 DG-FR------CAPITLEHAKNNdkIEFLTPYVVEEIKGDAsgvsslsiKNTATNETRELIVPGFFIF-VGYDVNNAVLK 247
Cdd:COG0446 157 PRlLGvldpemAALLEEELREHG--VELRLGETVVAIDGDD--------KVAVTLTDGEEIPADLVVVaPGVRPNTELAK 226
|
250 260 270
....*....|....*....|....*....|....
gi 446486571 248 QEDnsmlCKCDEYGSIVVDFSMKTDVQGLFAAGD 281
Cdd:COG0446 227 DAG----LALGERGWIKVDETLQTSDPDVYAAGD 256
|
|
| YhiN |
COG2081 |
Predicted flavoprotein YhiN [General function prediction only]; |
5-118 |
1.80e-09 |
|
Predicted flavoprotein YhiN [General function prediction only];
Pssm-ID: 441684 [Multi-domain] Cd Length: 402 Bit Score: 58.14 E-value: 1.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 5 AIIGGGPAGLSAGLYATRGGVKnAVLFEKgMP----------GGQ--IT----GSSEIENYPG----VKEVVSGL---DF 61
Cdd:COG2081 1 IVIGAGAAGLMAAITAAERGAR-VLLLEK-NPkvgrkilisgGGRcnFTnsepLPEFLNYYGGnphfLKSALSRFtpeDL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 62 M-------QPWQE----QCF----------RfGLKHEM----------TAVQRVSKKDSHFVILAEDGKTFEAKSVIIAT 110
Cdd:COG2081 79 IaffeglgIETKEessgRVFpdsskasdilR-ALLAELreagveirlrTRVTGIEKEDGGFGVETPDGETVRADAVVLAT 157
|
....*....
gi 446486571 111 GG-SPKRTG 118
Cdd:COG2081 158 GGlSYPKLG 166
|
|
| PRK12770 |
PRK12770 |
putative glutamate synthase subunit beta; Provisional |
5-309 |
4.81e-09 |
|
putative glutamate synthase subunit beta; Provisional
Pssm-ID: 237197 [Multi-domain] Cd Length: 352 Bit Score: 56.54 E-value: 4.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 5 AIIGGGPAGLSA-GLYATRG-------------GVknaVLFekGMPGGQITGSSEIEnypGVKEVVsgldfmqpwqEQCF 70
Cdd:PRK12770 22 AIIGAGPAGLAAaGYLACLGyevhvydklpepgGL---MLF--GIPEFRIPIERVRE---GVKELE----------EAGV 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 71 RF---------GLKHEMTAVQRVSkkdsHFVILAEDGKTFEAksVIIATGG-SPKRTGIKGESeywGKGVstcatCDGFF 140
Cdd:PRK12770 84 VFhtrtkvccgEPLHEEEGDEFVE----RIVSLEELVKKYDA--VLIATGTwKSRKLGIPGED---LPGV-----YSALE 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 141 Y--------------------KNKEVAVLGGGDTAV---EEAIYLAniCKKVYLIHRRdGFRCAP-----ITLEHAKNND 192
Cdd:PRK12770 150 YlfriraaklgylpwekvppvEGKKVVVVGAGLTAVdaaLEAVLLG--AEKVYLAYRR-TINEAPagkyeIERLIARGVE 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 193 KIEFLTPyvvEEIKGDaSGVSSLSIKNT------ATNETRELIVPG--FFIFVGYdVNNAVLKQEDNSMLCKC-----DE 259
Cdd:PRK12770 227 FLELVTP---VRIIGE-GRVEGVELAKMrlgepdESGRPRPVPIPGseFVLEADT-VVFAIGEIPTPPFAKEClgielNR 301
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 446486571 260 YGSIVVDFSMKTDVQGLFAAGDIRIfAPKQVVCAASDGATAALSVISYLE 309
Cdd:PRK12770 302 KGEIVVDEKHMTSREGVFAAGDVVT-GPSKIGKAIKSGLRAAQSIHEWLD 350
|
|
| HI0933_like |
pfam03486 |
HI0933-like protein; |
3-118 |
7.25e-08 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 53.35 E-value: 7.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 3 DCAIIGGGPAGLSAGLYATRGGVKnAVLFEKG--------MPGG---QITGSSE-----IENYPG-VKEVVSGL------ 59
Cdd:pfam03486 2 DVIVIGGGAAGLMAAISAAKRGRR-VLLIEKGkklgrkilISGGgrcNVTNLSEepdnfLSRYPGnPKFLKSALsrftpw 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 60 DFMQ-------PWQE-----------------QCFRFGLK------HEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIA 109
Cdd:pfam03486 81 DFIAffeslgvPLKEedhgrlfpdsdkasdivDALLNELKelgvkiRLRTRVLSVEKDDDGRFRVKTGGEELEADSLVLA 160
|
170
....*....|
gi 446486571 110 TGG-SPKRTG 118
Cdd:pfam03486 161 TGGlSWPKTG 170
|
|
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
5-309 |
6.86e-07 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 50.55 E-value: 6.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 5 AIIGGGPAGLSAGLYATRGGVKnAVLFEKgmpggqitgSSEIenypGvkevvsGLdfmqpwqeqcFRFGL---KHEMTAV 81
Cdd:PRK12810 147 AVVGSGPAGLAAADQLARAGHK-VTVFER---------ADRI----G------GL----------LRYGIpdfKLEKEVI 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 82 QRVSKkdshfvILAEDGKTFEAK-----------------SVIIATG-GSPKRTGIKGESeywGKGV--------STCAT 135
Cdd:PRK12810 197 DRRIE------LMEAEGIEFRTNvevgkditaeellaeydAVFLGTGaYKPRDLGIPGRD---LDGVhfamdfliQNTRR 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 136 CDGFFY------KNKEVAVLGGGDTA---VEEAIYLAniCKKVyliHRRDgfrcapIT----LEHAKNNDKIEFLTPYVV 202
Cdd:PRK12810 268 VLGDETepfisaKGKHVVVIGGGDTGmdcVGTAIRQG--AKSV---TQRD------IMpmppSRRNKNNPWPYWPMKLEV 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 203 ----------------EEIKGDASGVSSLSIKNTATNETRELIVPG--FFI----------FVGYDvnNAVLKQEDnsml 254
Cdd:PRK12810 337 snaheegverefnvqtKEFEGENGKVTGVKVVRTELGEGDFEPVEGseFVLpadlvllamgFTGPE--AGLLAQFG---- 410
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 446486571 255 CKCDEYGSIVV-DFSMKTDVQGLFAAGDIRifaPKQ--VVCAASDGATAALSVISYLE 309
Cdd:PRK12810 411 VELDERGRVAApDNAYQTSNPKVFAAGDMR---RGQslVVWAIAEGRQAARAIDAYLM 465
|
|
| PRK13748 |
PRK13748 |
putative mercuric reductase; Provisional |
87-302 |
1.52e-06 |
|
putative mercuric reductase; Provisional
Pssm-ID: 184298 [Multi-domain] Cd Length: 561 Bit Score: 49.38 E-value: 1.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 87 KDSHFVI--LAEDG-KTFEAKSVIIATGGSPKRTGIKG--ESEYWgkgVSTCAtcdgFFYKN--KEVAVLGGGDTAVEEA 159
Cdd:PRK13748 214 KDDQTLIvrLNDGGeRVVAFDRCLIATGASPAVPPIPGlkETPYW---TSTEA----LVSDTipERLAVIGSSVVALELA 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 160 IYLANICKKVYLIHRRD-GFRCAPI---TLEHAKNNDKIEFLTpyvveeiKGDASGVSSLSIKNTATNETRELIVPGFFI 235
Cdd:PRK13748 287 QAFARLGSKVTILARSTlFFREDPAigeAVTAAFRAEGIEVLE-------HTQASQVAHVDGEFVLTTGHGELRADKLLV 359
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446486571 236 FVGYDVNNAVLKQEDNSMlcKCDEYGSIVVDFSMKTDVQGLFAAGDIRIfAPKQVVCAASDGATAAL 302
Cdd:PRK13748 360 ATGRAPNTRSLALDAAGV--TVNAQGAIVIDQGMRTSVPHIYAAGDCTD-QPQFVYVAAAAGTRAAI 423
|
|
| PTZ00058 |
PTZ00058 |
glutathione reductase; Provisional |
96-281 |
2.06e-06 |
|
glutathione reductase; Provisional
Pssm-ID: 185420 [Multi-domain] Cd Length: 561 Bit Score: 48.84 E-value: 2.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 96 EDGKTFEAKSVIIATGGSPKRTGIkgeseywgKGVSTCATCDGFFY--KNKEVAVLGGGDTAVEeaiyLANICKKV---- 169
Cdd:PTZ00058 196 DDGQVIEGKNILIAVGNKPIFPDV--------KGKEFTISSDDFFKikEAKRIGIAGSGYIAVE----LINVVNRLgaes 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 170 YLIHRR-------DGFRCAPITLEHAKNNDKIefLTPYVVEEIKGDASGVSSLSIKNTATNETRELIVpgffIFVGYDVN 242
Cdd:PTZ00058 264 YIFARGnrllrkfDETIINELENDMKKNNINI--ITHANVEEIEKVKEKNLTIYLSDGRKYEHFDYVI----YCVGRSPN 337
|
170 180 190
....*....|....*....|....*....|....*....
gi 446486571 243 NAVLKQEDNSMLCkcdEYGSIVVDFSMKTDVQGLFAAGD 281
Cdd:PTZ00058 338 TEDLNLKALNIKT---PKGYIKVDDNQRTSVKHIYAVGD 373
|
|
| FAD_oxidored |
pfam12831 |
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ... |
3-193 |
2.28e-06 |
|
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.
Pssm-ID: 432816 [Multi-domain] Cd Length: 420 Bit Score: 48.76 E-value: 2.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 3 DCAIIGGGPAGLSAGLYATRGGVKnAVLFEK-GMPGGQITG---SSEIENYPGVKEVVSGL--DFMQ------------- 63
Cdd:pfam12831 1 DVVVVGGGPAGVAAAIAAARAGAK-VLLVERrGFLGGMLTSglvGPDMGFYLNKEQVVGGIarEFRQrlrargglpgpyg 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 64 -PWQEQCF--RFGLK--HEM-----------TAVQRVSKKDS--HFVILA--EDGKTFEAKSVIIATG--------GSPK 115
Cdd:pfam12831 80 lRGGWVPFdpEVAKAvlDEMlaeagvtvllhTRVVGVVKEGGriTGVTVEtkGGRITIRAKVFIDATGdgdlaalaGAPY 159
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446486571 116 RTGIKGESEYwGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNDK 193
Cdd:pfam12831 160 RVGRESRGEY-GEPPTLMFRLGGVGDEFLQAYVFRLCLTPEPAFRRVPFAKPEGYDPPRYELLRLFRAFDPGRLPGEK 236
|
|
| PRK12775 |
PRK12775 |
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin ... |
5-308 |
3.87e-06 |
|
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional
Pssm-ID: 183738 [Multi-domain] Cd Length: 1006 Bit Score: 48.40 E-value: 3.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 5 AIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGqitgsseIENYpGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAVqrV 84
Cdd:PRK12775 434 AICGSGPAGLAAAADLVKYGVDVTVYEALHVVGG-------VLQY-GIPSFRLPRDIIDREVQRLVDIGVKIETNKV--I 503
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 85 SKKDSHFVILAEDGktFEAksVIIATG-GSPKRTGIKGESE---YWGKGVSTCATC---DGFFYKN------KEVAVLGG 151
Cdd:PRK12775 504 GKTFTVPQLMNDKG--FDA--VFLGVGaGAPTFLGIPGEFAgqvYSANEFLTRVNLmggDKFPFLDtpislgKSVVVIGA 579
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 152 GDTAVEeaiylaniCKKVyliHRRDG---FRC--------APITLE---HAKnNDKIEFLTPYVVEEIKGDASG-VSSLS 216
Cdd:PRK12775 580 GNTAMD--------CLRV---AKRLGaptVRCvyrrseaeAPARIEeirHAK-EEGIDFFFLHSPVEIYVDAEGsVRGMK 647
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 217 IKNTATNET-----RELIVPGFFIFVGYDVNNAVLKQEDNSMLCKC------DEYGSIVVDFSMKTDVQ-----GLFAAG 280
Cdd:PRK12775 648 VEEMELGEPdekgrRKPMPTGEFKDLECDTVIYALGTKANPIITQStpglalNKWGNIAADDGKLESTQstnlpGVFAGG 727
|
330 340
....*....|....*....|....*...
gi 446486571 281 DIrIFAPKQVVCAASDGATAALSVISYL 308
Cdd:PRK12775 728 DI-VTGGATVILAMGAGRRAARSIATYL 754
|
|
| PRK07251 |
PRK07251 |
FAD-containing oxidoreductase; |
96-282 |
4.66e-06 |
|
FAD-containing oxidoreductase;
Pssm-ID: 180907 [Multi-domain] Cd Length: 438 Bit Score: 47.82 E-value: 4.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 96 EDGKTFEAKSVIIATGGSPKRTGIKGESE----YWGKGVSTCATcdgffyKNKEVAVLGGGDTAVEEAIYLANICKKVYL 171
Cdd:PRK07251 112 DEKIELTAETIVINTGAVSNVLPIPGLADskhvYDSTGIQSLET------LPERLGIIGGGNIGLEFAGLYNKLGSKVTV 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 172 IHRRDGF--RCAPITLEHAKN---NDKIEFLTPYVVEEIKGDASGVsslsiknTATNETRELIVPGFFIFVGYDVNNAVL 246
Cdd:PRK07251 186 LDAASTIlpREEPSVAALAKQymeEDGITFLLNAHTTEVKNDGDQV-------LVVTEDETYRFDALLYATGRKPNTEPL 258
|
170 180 190
....*....|....*....|....*....|....*.
gi 446486571 247 KQEDNSMlcKCDEYGSIVVDFSMKTDVQGLFAAGDI 282
Cdd:PRK07251 259 GLENTDI--ELTERGAIKVDDYCQTSVPGVFAVGDV 292
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
5-311 |
1.51e-05 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 46.41 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 5 AIIGGGPAGLSAGLYATRGGvkNAV-LFEKG-MPGGqitgsseienypgvkevvsgldfMqpwqeqcFRFG--------- 73
Cdd:PRK12771 141 AVIGGGPAGLSAAYHLRRMG--HAVtIFEAGpKLGG-----------------------M-------MRYGipayrlpre 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 74 -LKHEMTAV----------QRVSKKdshfVILAEDGKTFEAksVIIATGG-SPKRTGIKGESeywGKGVSTCATcdgfFY 141
Cdd:PRK12771 189 vLDAEIQRIldlgvevrlgVRVGED----ITLEQLEGEFDA--VFVAIGAqLGKRLPIPGED---AAGVLDAVD----FL 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 142 KN----------KEVAVLGGGDTAVEEAiYLANIC--KKVYLIHRRDgfR----CAPITLEHAKnNDKIEFLTPYVVEEI 205
Cdd:PRK12771 256 RAvgegeppflgKRVVVIGGGNTAMDAA-RTARRLgaEEVTIVYRRT--RedmpAHDEEIEEAL-REGVEINWLRTPVEI 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446486571 206 KGDASGVSSLSIK---------------NTATNETRE--LIVpgffIFVGYDVNNAVLKQEDNSMlckcDEYGSIVVD-F 267
Cdd:PRK12771 332 EGDENGATGLRVItvekmeldedgrpspVTGEEETLEadLVV----LAIGQDIDSAGLESVPGVE----VGRGVVQVDpN 403
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 446486571 268 SMKTDVQGLFAAGDIrIFAPKQVVCAASDGATAALSVISYLEHH 311
Cdd:PRK12771 404 FMMTGRPGVFAGGDM-VPGPRTVTTAIGHGKKAARNIDAFLGGE 446
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
1-40 |
7.74e-05 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 44.05 E-value: 7.74e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 446486571 1 MIDCAIIGGGPAGLSAGLYATRGGVKnAVLFEKG-MPGGQI 40
Cdd:COG1232 1 MKRVAVIGGGIAGLTAAYRLAKAGHE-VTVLEASdRVGGLI 40
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
1-44 |
6.24e-04 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 41.04 E-value: 6.24e-04
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 446486571 1 MIDCAIIGGGPAGLSAGLYATRGGVKnAVLFEKGMPGGqitGSS 44
Cdd:COG0665 2 TADVVVIGGGIAGLSTAYHLARRGLD-VTVLERGRPGS---GAS 41
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
1-38 |
7.29e-04 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 40.99 E-value: 7.29e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 446486571 1 MIDCAIIGGGPAGLSAGLYATRGGVKnaVL-FEK-GMPGG 38
Cdd:COG1233 3 MYDVVVIGAGIGGLAAAALLARAGYR--VTvLEKnDTPGG 40
|
|
| PRK06185 |
PRK06185 |
FAD-dependent oxidoreductase; |
3-33 |
9.26e-04 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 235729 [Multi-domain] Cd Length: 407 Bit Score: 40.61 E-value: 9.26e-04
10 20 30
....*....|....*....|....*....|.
gi 446486571 3 DCAIIGGGPAGLSAGLYATRGGVkNAVLFEK 33
Cdd:PRK06185 8 DCCIVGGGPAGMMLGLLLARAGV-DVTVLEK 37
|
|
| GlpB |
COG3075 |
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]; |
3-30 |
1.82e-03 |
|
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];
Pssm-ID: 442309 Cd Length: 415 Bit Score: 39.78 E-value: 1.82e-03
10 20
....*....|....*....|....*...
gi 446486571 3 DCAIIGGGPAGLSAGLYATRGGVKNAVL 30
Cdd:COG3075 4 DVVVIGGGLAGLTAAIRAAEAGLRVAIV 31
|
|
| PRK05329 |
PRK05329 |
glycerol-3-phosphate dehydrogenase subunit GlpB; |
1-30 |
1.83e-03 |
|
glycerol-3-phosphate dehydrogenase subunit GlpB;
Pssm-ID: 235412 Cd Length: 422 Bit Score: 39.45 E-value: 1.83e-03
10 20 30
....*....|....*....|....*....|
gi 446486571 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVL 30
Cdd:PRK05329 2 KFDVLVIGGGLAGLTAALAAAEAGKRVALV 31
|
|
| Thi4 |
pfam01946 |
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme. |
3-42 |
2.63e-03 |
|
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
Pssm-ID: 460393 Cd Length: 232 Bit Score: 38.61 E-value: 2.63e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 446486571 3 DCAIIGGGPAGLSAGLY-ATRGGVKNAVLFEKGMPGGQITG 42
Cdd:pfam01946 19 DVVIVGAGSSGLTAAYYlAKNRGLKVAIIERSVSPGGGAWL 59
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
1-30 |
2.86e-03 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 38.77 E-value: 2.86e-03
10 20 30
....*....|....*....|....*....|
gi 446486571 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVL 30
Cdd:COG0654 3 RTDVLIVGGGPAGLALALALARAGIRVTVV 32
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
5-50 |
3.04e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 39.10 E-value: 3.04e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 446486571 5 AIIGGGPAGLSAGLYATRGGVKnAVLFEK-GMPGGqITGSSEIENYP 50
Cdd:PRK07233 3 AIVGGGIAGLAAAYRLAKRGHE-VTVFEAdDQLGG-LAASFEFGGLP 47
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
3-44 |
4.39e-03 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 38.42 E-value: 4.39e-03
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 446486571 3 DCAIIGGGPAGLSAGLYATRGGvKNAVLFEKGMP-GGQITGSS 44
Cdd:pfam00890 1 DVLVIGGGLAGLAAALAAAEAG-LKVAVVEKGQPfGGATAWSS 42
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
3-68 |
7.10e-03 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 37.76 E-value: 7.10e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446486571 3 DCAIIGGGPAGLSAGLYATRGGVKnAVLFEKGMP---------GGQIT-GSSEIENYPGVKEVVSGLDFMQPWQEQ 68
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLS-VTLLERGDDpgsgasgrnAGLIHpGLRYLEPSELARLALEALDLWEELEEE 75
|
|
| glycerol3P_GlpB |
TIGR03378 |
glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are ... |
3-30 |
8.96e-03 |
|
glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are the B subunit, product of the glpB gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase. [Energy metabolism, Anaerobic]
Pssm-ID: 213807 Cd Length: 419 Bit Score: 37.31 E-value: 8.96e-03
10 20
....*....|....*....|....*...
gi 446486571 3 DCAIIGGGPAGLSAGLYATRGGVKNAVL 30
Cdd:TIGR03378 2 DVIIIGGGLAGLSCALRLAEAGKKCAII 29
|
|
| |
