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Conserved domains on  [gi|446406457|ref|WP_000484312|]
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fimbrial chaperone [Escherichia coli]

Protein Classification

fimbria/pilus periplasmic chaperone( domain architecture ID 11484525)

fimbria/pilus periplasmic chaperone, similar to Haemophilus sp. GhfB protein which is thought to confer upon the strain the ability to survive in the genital tract

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK09926 PRK09926
fimbrial chaperone;
1-241 1.81e-166

fimbrial chaperone;


:

Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 459.19  E-value: 1.81e-166
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457   1 MFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTAT 80
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  81 PPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVPPKPK-DAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPA 159
Cdd:PRK09926  81 PPVSRIDPKRGQTIKLMYTASTALPKDRESVFWFNVLEVPPKPDaEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457 160 KITWKLNNTQ----LQANNPTPYYVSFNEVKLESGGKTYNVNSSMVAPFSQASFGVTGLPGSVSSGKVVFKAINDFGGNI 235
Cdd:PRK09926 161 ALKWSWAGSEgkasLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSGKASSGKVHFYAINDFGGAI 240


                 ....*.
gi 446406457 236 DGSATF 241
Cdd:PRK09926 241 EGNASL 246
 
Name Accession Description Interval E-value
PRK09926 PRK09926
fimbrial chaperone;
1-241 1.81e-166

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 459.19  E-value: 1.81e-166
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457   1 MFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTAT 80
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  81 PPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVPPKPK-DAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPA 159
Cdd:PRK09926  81 PPVSRIDPKRGQTIKLMYTASTALPKDRESVFWFNVLEVPPKPDaEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457 160 KITWKLNNTQ----LQANNPTPYYVSFNEVKLESGGKTYNVNSSMVAPFSQASFGVTGLPGSVSSGKVVFKAINDFGGNI 235
Cdd:PRK09926 161 ALKWSWAGSEgkasLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSGKASSGKVHFYAINDFGGAI 240


                 ....*.
gi 446406457 236 DGSATF 241
Cdd:PRK09926 241 EGNASL 246
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
8-241 1.95e-96

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 281.49  E-value: 1.95e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457   8 TVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTATPPVSRVE 87
Cdd:COG3121    6 RLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLE 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  88 PKRGQTVKVMYTGATaLPKDRESVYWFNVLEVPPKPKDAEaDKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNN 167
Cdd:COG3121   86 PGKSQTVRIIRTGPP-LPQDRESLFRLNVDEIPPKDASEE-GKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVG 163

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446406457 168 TQLQANNPTPYYVSFNEVKLESGGKTYNVNSSMVAPFSQASFGVTGLPGSVSSGKVVFKAINDFGGNIDGSATF 241
Cdd:COG3121  164 NGLTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAAGGKVTWATINDYGGAVPLEATL 237
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 27-150 3.98e-56

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 175.08  E-value: 3.98e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457   27 IIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTATPPVSRVEPKRGQTVKVmYTGATALPK 106
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRI-YTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 446406457  107 DRESVYWFNVLEVPPKPKdAEADKNLLQLAFRTRIKLFYRPSGL 150
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDK-PKGGQNGLQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
PRK09926 PRK09926
fimbrial chaperone;
1-241 1.81e-166

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 459.19  E-value: 1.81e-166
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457   1 MFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTAT 80
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTAT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  81 PPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVPPKPK-DAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPA 159
Cdd:PRK09926  81 PPVSRIDPKRGQTIKLMYTASTALPKDRESVFWFNVLEVPPKPDaEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457 160 KITWKLNNTQ----LQANNPTPYYVSFNEVKLESGGKTYNVNSSMVAPFSQASFGVTGLPGSVSSGKVVFKAINDFGGNI 235
Cdd:PRK09926 161 ALKWSWAGSEgkasLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSGKASSGKVHFYAINDFGGAI 240


                 ....*.
gi 446406457 236 DGSATF 241
Cdd:PRK09926 241 EGNASL 246
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
8-241 1.95e-96

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 281.49  E-value: 1.95e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457   8 TVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTATPPVSRVE 87
Cdd:COG3121    6 RLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLE 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  88 PKRGQTVKVMYTGATaLPKDRESVYWFNVLEVPPKPKDAEaDKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNN 167
Cdd:COG3121   86 PGKSQTVRIIRTGPP-LPQDRESLFRLNVDEIPPKDASEE-GKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVG 163

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446406457 168 TQLQANNPTPYYVSFNEVKLESGGKTYNVNSSMVAPFSQASFGVTGLPGSVSSGKVVFKAINDFGGNIDGSATF 241
Cdd:COG3121  164 NGLTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAAGGKVTWATINDYGGAVPLEATL 237
PRK15249 PRK15249
fimbrial chaperone;
12-235 2.63e-61

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 193.09  E-value: 2.63e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  12 LFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIK-VPFTATPPVSRVEPKR 90
Cdd:PRK15249  15 VFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPENSSaMPFIATPPVFRIQPKA 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  91 GQTVKVMYTGATALPKDRESVYWFNVLEVPPKPKDAEADKNLLQLAFRTRIKLFYRPSGLqGEPAEAPAKITWKLNNTQ- 169
Cdd:PRK15249  95 GQVVRVIYNNTKKLPQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMLRSRIKLFYRPDGL-GKPDNLAKKLQIKTVNKGs 173

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446406457 170 ----LQANNPTPYYVSFNEVKLESGGKTYNVNSSMVAPFSQASFGVTGLPGSVS-SGKVVFKAINDFGGNI 235
Cdd:PRK15249 174 gksgIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGKRSLKSfSGTVTVTLVNDQGARI 244
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 27-150 3.98e-56

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 175.08  E-value: 3.98e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457   27 IIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTATPPVSRVEPKRGQTVKVmYTGATALPK 106
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRI-YTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 446406457  107 DRESVYWFNVLEVPPKPKdAEADKNLLQLAFRTRIKLFYRPSGL 150
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDK-PKGGQNGLQLALRSRIKLFYRPAGL 122
lfpB PRK15290
fimbrial chaperone;
7-232 6.22e-48

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 158.23  E-value: 6.22e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457   7 KTVSALFVSTLLASAP-AFADIIISGTRIIYNADKKDVNVRLENKGNR-PLLIQNWLD--TGDDNADPsqikvPFTATPP 82
Cdd:PRK15290  18 KLFTAIILSVFLGQPAlTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKiPYLIQAWVDpfNKEDKSKA-----PFTVIPP 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  83 VSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVPPKPKDaeADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKIT 162
Cdd:PRK15290  93 VSRLEPSQEKVLRIIHTKGVSLPDDRESVFWLNIKNIPPSASN--KATNSLEIAVKTRIKLFWRPASIRLIPEDAAPKVK 170

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457 163 WKLNNTQLQANNPTPYYVSFNEVKLESggktYNVNSSMVAPFSQASFgvtGLPGSVSSGKVVFKAINDFG 232
Cdd:PRK15290 171 WRREGRNLIAENPNPIHISVMDVIVDG----HDVPLNMIRPFETLTL---PLPANSAGGQMTWRFINDYG 233
PRK15208 PRK15208
molecular chaperone LpfB;
7-232 3.41e-44

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 148.13  E-value: 3.41e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457   7 KTVSALFVSTLLASAPAFAD-IIISGTRIIYNADKKDVNVRLENKG-NRPLLIQNWLDTGDDNAdpsqiKVPFTATPPVS 84
Cdd:PRK15208   2 RLISFTALALALIAQNSFAGgVALSSTRVIYDGSKKEASLTVNNKSkTEEFLIQSWIDDANGNK-----KTPFIITPPLF 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  85 RVEPKRGQTVKVMYTGATaLPKDRESVYWFNVLEVPPKPKDAEAdKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWK 164
Cdd:PRK15208  77 KLDPTKNNVLRIVNITNT-LPQDRESVYWINVKAIPAKSEDAEN-KNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFT 154

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446406457 165 LNNTQLQANNPTPYYVSFNEV-----KLESGGktynvnssMVApfSQASFGVTGLPGSVSSGKVVFKAINDFG 232
Cdd:PRK15208 155 RAGNQIKVENPSAFNLTFNQFyangrDIEKAG--------MVP--AKGSLNIELPAGTGKVSEVKYNIINDFG 217
PRK15218 PRK15218
fimbrial assembly chaperone;
19-212 2.31e-42

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 143.58  E-value: 2.31e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  19 ASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTATPPVSRVEPKRGQTVKVMY 98
Cdd:PRK15218  12 AAMPAWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDTSLPPEKLQVPFIMTPPVIRVAANSGQQLKIKK 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  99 TgATALPKDRESVYWFNVLEVPPKpKDAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNTQLQANNPTPY 178
Cdd:PRK15218  92 L-ANNLPGDRESLFYLNVLDIPPN-SDENKDKNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRAPGSISVKNNSAN 169

                        170       180       190
                 ....*....|....*....|....*....|....
gi 446406457 179 YVSFNEVKlesGGKTYNVNSSMVAPFSQASFGVT 212
Cdd:PRK15218 170 WITIPEIK---AKSKVNKETLLLAPWSSQSITTT 200
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 4-205 1.16e-41

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 142.11  E-value: 1.16e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457   4 LVKKTVSALFVSTLLASA---PAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTAT 80
Cdd:PRK15253   9 YKQGRVNMKILSAVLLSAiilPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLT 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  81 PPVSRVEPKRGQTVKVMYTgATALPKDRESVYWFNVLEVPPKPKDaEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAK 160
Cdd:PRK15253  89 PPVARVAAESGQQIKIKKM-PNSLPDNKESLFYLNVLDIPPNSQE-NAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQR 166

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 446406457 161 ITWKLNNTQLQANNPTPYYVSFNEVKleSGGKTYNVNSSMVAPFS 205
Cdd:PRK15253 167 IGLFRSNKTVIMKNDTANWITVTDVK--AGNTKINDQTIMLPPLS 209
PRK15295 PRK15295
fimbrial assembly chaperone;
14-232 3.27e-41

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 140.47  E-value: 3.27e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  14 VSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNadpSQIKVPFTATPPVSRVEPKRGQT 93
Cdd:PRK15295   8 LVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVDPQ---VTNKQAFIITPPLFRLDAGQKNS 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  94 VKVMYTGATaLPKDRESVYWFNVLEVPpkPKDAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPA-KITWKLNNTQLQA 172
Cdd:PRK15295  85 IRVIRSGAP-LPADRESMYWLNIKGIP--SIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSqQLKWQTAGDVITV 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446406457 173 NNPTPYYVSFNEVKLESggktYNVNSS-MVAPFSQASFGVTglPGSVSSGKVVFKAINDFG 232
Cdd:PRK15295 162 NNPTPYYMNFASVTLNS----HEVKSAtFVPPKSSASFKLG--STAAPHGTVTWRLISDYG 216
PRK15211 PRK15211
fimbrial chaperone;
5-233 2.17e-39

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 136.11  E-value: 2.17e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457   5 VKKTVSALfVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDtgddNADPSQIKVPFTATPPVS 84
Cdd:PRK15211   3 MMKWGLVS-LLSLAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWID----NTTQGSSTVYMVPAPPFF 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  85 RVEPKRGQTVKVMYTGaTALPKDRESVYWFNVLEVPPKPKDAEAdkNLLQLAFRTRIKLFYRPSGLQG--EPAEAPAKIT 162
Cdd:PRK15211  78 KVRPKEKQIIRIMKTD-SALPKDRESLFWLNVQEIPPKPKASEG--NVLAVALNTQVKLIYRPKALKEgrENAEKNLQII 154

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446406457 163 WKLNNTQLQanNPTPYYVSFNEVKLEsgGKTYNVNS------SMVAPFSQASFGvtglpGSVSSGKVVFKAINDFGG 233
Cdd:PRK15211 155 HRGGETYLK--NPTPYYFAVTGVKLN--GQPVKLSDrvmneiAQLAPFSEVSLG-----KLSLNGTVTVQAVNDWGG 222
PRK15195 PRK15195
molecular chaperone FimC;
11-232 9.30e-39

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 134.22  E-value: 9.30e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  11 ALFVStllASAPAFADIIISGTRIIYNADKKDVNVRLENKG-NRPLLIQNWLDTgddnaDPSQIKVPFTATPPVSRVEPK 89
Cdd:PRK15195  14 YLIIS---ASVHAAGGIALGATRVIYPADAKQTSLAIRNSHtNERYLVNSWIEN-----SSGVKEKSFIVTPPLFVSEPK 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  90 RGQTVKVMYTGAtALPKDRESVYWFNVLEVPPKPKDAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNTQ 169
Cdd:PRK15195  86 SENTLRIIYAGP-PLAADRESLFWMNVKAIPSVDKNALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGNH 164

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446406457 170 LQANNPTPYYVSFneVKLESGGKTynVNSSMVAPFSQASfgvTGLPGSVsSGKVVFKAINDFG 232
Cdd:PRK15195 165 LKVHNPSPYYVTL--VNLQVGSQK--LGNAMIAPKVNSQ---IPLPSGV-QGKLKFQTVNDYG 219
PRK15246 PRK15246
fimbrial assembly chaperone;
22-232 1.01e-37

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 131.62  E-value: 1.01e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  22 PAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQIKVPFTATPPVSRVEPKRGQTVKVMYTGA 101
Cdd:PRK15246   7 PAQAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLSSR 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457 102 TALPKDRESVYWFNVLEVPPKPKDAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNTQLQANNPTPYYVS 181
Cdd:PRK15246  87 QQLATDRESLFWLNIYQIPPVTQDIKNHPRKLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVNPTSWYMS 166

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 446406457 182 FNeVKLESGGKTYNVnssMVAPFSQASFGVTGLPGSVSSgkVVFKAINDFG 232
Cdd:PRK15246 167 LT-LTMDNKKSIGDI---MVAPKTALDVPLTRSPTPGAS--INYAVINDSG 211
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 10-233 7.49e-37

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 129.51  E-value: 7.49e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  10 SALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNADPSQikVPFTATPPVSRVEPK 89
Cdd:PRK15299   7 AGLLCCLLCGSLAHAAGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAQSISETGASGD--APFMVTPPLFRLNGG 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  90 RGQTVKVMYTGATaLPKDRESVYWFNVLEVPPKPKDAEadKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNTQ 169
Cdd:PRK15299  85 QKNVLRIIRTGGN-LPEDRESLYWLDIKSIPSSNPDNK--HNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGRT 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446406457 170 LQANNPTPYYVSFNEVkleSGGKTYNVNSSMVAPFSQASFgvtGLPGSvSSGKVVFKAINDFGG 233
Cdd:PRK15299 162 LTVKNPTPYYMNFATL---SVGSQKVKAPRYVAPFGNAQY---TLPAA-ASGPIAWSIINDFGG 218
PRK11385 PRK11385
fimbrial chaperone;
14-233 5.21e-30

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 111.76  E-value: 5.21e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  14 VSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLD--TGDDNADPSQIKVPFTATPPVSRVEPKRG 91
Cdd:PRK11385  15 VLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINrpTRWAGGEASTVPAPLLAAPPLILLKPGTT 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  92 QTVKVMYTGATALPKDRESVYWFNVLEVPpkpkDAEADKNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNTQLQ 171
Cdd:PRK11385  95 GTLRLLRTESDILPVDRETLFELSIASVP----SGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNSQGVQ 170

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446406457 172 ANNPTPYYVsfNEVKLESGGKTYNvNSSMVAPFSQASfgvTGLPGSVSSGKVVFKAINDFGG 233
Cdd:PRK11385 171 LTNPTPYYI--NLIQVSVNGKALS-NAGVVPPKSQRQ---TSWCQAIAPCHVAWRAINDYGG 226
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 13-234 9.04e-30

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 111.80  E-value: 9.04e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  13 FVSTLLASAP--AFADIIISGTRIIYNADKKDVNVRLEN-KGNRPLLIQNWLDTGDDNADPSQikvpFTATPPVSRVEPK 89
Cdd:PRK15274  12 LIASVLLAAPlvSHSAIVPDRTRVIFNGNENSITVTLKNgNATLPYLAQAWLEDDKFAKDTRY----FTALPPLQRIEPK 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  90 RGQTVKVM-YTGATALPKDRESVYWFNVLEVPPKpkdaeADK-NLLQLAFRTRIKLFYRPSGLQGEPAEA---PAKITWK 164
Cdd:PRK15274  88 SDGQVKVQpLPAAASLPQDRESLFYFNVREIPPK-----SDKpNTLQLALQTRIKFFYRPVAVARQVDKThpwQTKLTLT 162

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457 165 LNNTQLQANNPTPYYVSFNEVKLESGGKTYNVNSSMVAPFSQASFGVTGlpGSVSSGKVVfKAINDFGGN 234
Cdd:PRK15274 163 YQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKG--ASLGSSPVV-GYVDDYGGH 229
PRK15285 PRK15285
fimbrial chaperone StfD;
1-235 2.55e-29

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 110.25  E-value: 2.55e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457   1 MFPLVKKTVSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNR-PLLIQNWLDtgddNADPSQIKVPFTA 79
Cdd:PRK15285   1 MMPLKRYNLAAVLLLLLGGYGSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKlPYLAQSWVE----DEKGVKITSPLIV 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  80 TPPVSRVEPKRGQTVKVMYTGATA-LPKDRESVYWFNVLEVPPkpkdaEADK-NLLQLAFRTRIKLFYRPSGLQGEPAEA 157
Cdd:PRK15285  77 VPPVQRIEPSAIGQVKIQGMPALAsLPQDRETLFYYNVREIPP-----QSDKpNTLQIALQTRIKVFYRPQALSKIDMQH 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457 158 P--AKITWKLNNTQLQANNPTPYYVSF-NEVKLESGGKTYNVNSSMVAPFSQASFGvtglpGSVSS--GKVVFKAINDFG 232
Cdd:PRK15285 152 PwqYKITLQRQGNGYQVSNPTGYYVVLsNASNRMDGTPARGFSPLVIAPKSNVTLG-----GDASElgHSPVLTYVNDYG 226


                 ...
gi 446406457 233 GNI 235
Cdd:PRK15285 227 ARL 229
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
17-232 1.59e-28

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 107.87  E-value: 1.59e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  17 LLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGD--DNADPSQIKVPFTATPPVSRVEPKRGQTV 94
Cdd:PRK15192  14 LLPISWAQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGrwPGTKNEGNITPFVVTPPLFMLSARQENSM 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  95 KVMYTGAtALPKDRESVYWFNVLEVPPKPKDAeadkNLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNTQLQANN 174
Cdd:PRK15192  94 RVVYTGA-PLPADRESLFTLSIAAIPSGKPEA----NRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATVRN 168

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446406457 175 PTPYYVSFneVKLESGGKTYNvNSSMVAPFSQASfgvTGLPGSVSSGKVVFKAINDFG 232
Cdd:PRK15192 169 PTPYYVTL--FLLRANERAQD-NAGVVAPFATRQ---TDWCRHTVRCTVRWQSINDYG 220
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 5-233 1.74e-28

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 107.54  E-value: 1.74e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457   5 VKKTVSALFVSTLLASAPAFA------DIIISGTRIIYNADKKDVNVRLENKGNRPL-LIQNWLDtgddNADPSQiKVPF 77
Cdd:PRK15188   1 MKKNVPIFLRLLLLLSAAGLSfaaqagGIALGATRVIYPQGSKQTSLPIINSSASNVfLIQSWVA----NADGSR-STDF 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  78 TATPPVSRVEPKRGQTVKVMYTGATaLPKDRESVYWFNVLEVPPKPKDaEADKNLLQLAFRTRIKLFYRPSGLQGEPAEA 157
Cdd:PRK15188  76 IITPPLFVIQPKKENILRIMYVGPS-LPTDRESVFYLNSKAIPSVDKN-KLTGNSLQIATQSVIKLFIRPKNLAEAPAHA 153

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446406457 158 PAKITWKLNNTQLQANNPTPYYVSFneVKLESGGKtyNVNSSMVAPfsqasFGVTGLPGsvSSGKVVFKAINDFGG 233
Cdd:PRK15188 154 PSTLRCRNERGQLTITNPSPYYVSM--VELYSAGK--KLPNTMVPP-----KGAITLPA--TPGQVSLRTVNDFGA 218
PRK15224 PRK15224
pili assembly chaperone PapD;
9-233 6.36e-26

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 100.97  E-value: 6.36e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457   9 VSALFVSTLLASAPAFADIIISGTRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNAdpsqiKVPFTATPPVSRVEP 88
Cdd:PRK15224  12 TPVYAAEQKLNLNTKSFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKSS-----PAPFLVMPPLFRLEA 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  89 KRGQTVKVMYTGATaLPKDRESVYWFNVLEVPPK--PKDAEADKNLL--QLAFRTRIKLFYRPSGLQGEPAEAPAKITWK 164
Cdd:PRK15224  87 NQQSQLRIVRTGGD-MPTDRETLQWVCIKAVPPEnePSDTQAKGATLdlNLSINVCDKLIFRPDAVKGTPEDVAGNLRWV 165

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446406457 165 LNNTQLQANNPTPYYVSFNEVKLesGGKTYnVNSSMVAPFSQASFgvtGLPGSvSSGKVVFKAINDFGG 233
Cdd:PRK15224 166 ETGNKLKVENPTPFYMNLASVTV--GGKPI-TGLEYIPPFADKTL---NMPGS-AHGDIEWRVITDFGG 227
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 17-233 1.16e-24

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 97.92  E-value: 1.16e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  17 LLASAPAF-----ADIIISGTRIIYNADKKDVNVRLENKG-NRPLLIQNWLDTGDDNADPSqikvpFTATPPVSRVEPKR 90
Cdd:PRK15254   3 LLALAAAWsqyspAAVNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWVTDADGVRTDA-----LMALPPLQRIDAGQ 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  91 GQTVKVMYT-GAT-ALPKDRESVYWFNVLEVPPKPKdaeaDKNLLQLAFRTRIKLFYRPSGLQGEPAEAPA-KITWKLNN 167
Cdd:PRK15254  78 KSQVRITQVrGLTdKLPQDRETLFWFNVRGVPPKPE----DDNVLQLAMQSQLKLFYRPKAIIRSSSDQPErKLTAERNA 153

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446406457 168 TQLQANNPTPYYVSFNEVKLESGGKTYNVNSS-MVAPFSQASFGVTgLPGSVSSGKVVFkaINDFGG 233
Cdd:PRK15254 154 GHLTLRNPTPYYITVAWLGADRSHRLSGFREGvMVPPLGSLPLKAV-LPAETRTLWVGY--IDDYGG 217
PRK15233 PRK15233
fimbrial chaperone SefB;
32-235 5.60e-19

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 82.85  E-value: 5.60e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  32 TRIIYNADKKDVNVRLENKGNRPLLIQNWLDTGDDNAdpsqiKVPFTATPPVSRVEPKRGQTVKVMYTgATALPKDRESV 111
Cdd:PRK15233  47 TRVIYKEDAPSTSFWIMNEKEYPILVQTQVYNDDKSS-----KAPFIVTPPILKVESNARTRLKVIPT-SNLFNKNEESL 120

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457 112 YWFNVLEVPPKPKDAEADKNLLQLAFRTR------IKLFYRPSGLQGEPAEAPAKITWKLNNTQLQANNPTPYYVSFNEV 185
Cdd:PRK15233 121 YWLCVKGVPPLNDNESNNKNNITTNLNVNvvtnscIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYVNIANI 200

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 446406457 186 KleSGGKTYNVNSSMVAPfsqasFGVTGLPGSVSSgKVVFKAINDFGGNI 235
Cdd:PRK15233 201 K--SGNLSFNIPNGYIEP-----FGYAQLPGGVHS-KITLTILDDNGAEI 242
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 173-236 9.63e-19

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 77.30  E-value: 9.63e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446406457  173 NNPTPYYVSFNEVKLESGGKTYNVNSSMVAPFSQASFGvtGLPGSVSSGKVVFKAINDFGGNID 236
Cdd:pfam02753   2 KNPTPYYVTFSSLSLGGGGKELALDPGMVAPFSSQTFA--GLPAPAAGGTVSYTYINDYGGIVP 63
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 6-224 4.51e-10

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 57.74  E-value: 4.51e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457   6 KKTVSALFVSTLLASAPA---FADIIISGTRIIYNADKKDVNVRLENKGNRP-LLIQNWLDTGDDNAdpsqikVPFTATP 81
Cdd:PRK09918   2 RFNLFFLFTALVLLSSSSavhAAGMVPETSVVIVEESDGEGSINVKNTDSNPiLLYTTLVDLPEDKS------KLLLVTP 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446406457  82 PVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNvlEVPPKPKdaeaDKNLLQLAFRTRIKLFYRPSGLQGEpaEAPAK- 160
Cdd:PRK09918  76 PVARVEPGQSQQVRFILKSGSPLNTEHLLRVSFE--GVPPKPG----GKNKVVMPIRQDLPVLIQPAALPVV--RDPWKl 147

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446406457 161 ITWKLNNTQLQANNPTPYYVSFNE-VKLESGGKTYNVNSSMVAPFSQASFGVTGLPGSVSSGKVV 224
Cdd:PRK09918 148 LVWSISGNNLVVSNPSPYVVRLGQqVILLPSGKVVALPKPYILPGESLTVAITNSKATDTKVRFF 212
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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