|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-440 |
3.22e-124 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 367.94 E-value: 3.22e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 1 MFCLIFLMPLCFFYNFWWVVHTLMFMLMFMYMFGYYTFSDYNMISINYGVDMFSFSLIMLSFLICSLMIMASSMIYLTFF 80
Cdd:MTH00163 5 LFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 81 YYNIFLFLILFLMLMLILSFSSMSLFSFYLFFESSLIPTLLLILGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWT 160
Cdd:MTH00163 85 YSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 161 LGTLCFFMLYDFFEVDLIFYIFLLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVY 240
Cdd:MTH00163 165 SGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSKLGLK 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 241 NNFIFMMNSLLGGLIISLMCMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYER 320
Cdd:MTH00163 245 FNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYER 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 321 FGSRSLLLNKGLINFMPSMSFWWFMFISFNMAAPPSYNLFGEIMLFNSIMSWSYYLMLVLLFLSFFSALYSLYLYSYSQH 400
Cdd:MTH00163 325 LGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYSYSQH 404
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 440655463 401 GVYYSGLFSFCLGVFREYHLLFMHFYPLLILFLYSYLFIY 440
Cdd:MTH00163 405 GKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFML 444
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
38-438 |
4.24e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 315.24 E-value: 4.24e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 38 FSDYNMISINYGVDMFSFSLIMLSFLICSLMIMASSMIYLTFFYYNIFLFLILFLMLMLILSFSSMSLFSFYLFFESSLI 117
Cdd:MTH00150 10 FSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 118 PTLLLILGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLYD---FFEVDLIFYIFLLLAFLIKIPMF 194
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSlrkLLSSMGLWGLLVFLAFLVKLPMY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 195 IFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYNNFIFMMNSLLGGLIISLMCMRQIDLKSLIAYSS 274
Cdd:MTH00150 170 PFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 275 VVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMSFWWFMFISFNMAAP 354
Cdd:MTH00150 250 VGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAP 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 355 PSYNLFGEIMLFNSIMSWSYYLMLVLLFLSFFSALYSLYLYSYSQHGVYYSGLFSFCLGVFREYHLLFMHFYPLLILFLY 434
Cdd:MTH00150 330 PSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILK 409
|
....
gi 440655463 435 SYLF 438
Cdd:MTH00150 410 SDLL 413
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-439 |
3.33e-97 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 298.82 E-value: 3.33e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 1 MFCLIFLMPLCFFYNFWWVVHTLMFMLMFMYMFGYYTFSDYNMISINYGVDMFSFSLIMLSFLICSLMIMASSMIYLTFF 80
Cdd:MTH00205 6 VFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 81 YYNIFLFLILFLMLMLILSFSSMSLFSFYLFFESSLIPTLLLILGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWT 160
Cdd:MTH00205 86 NSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 161 LGTLCFFMLYDFFEVDL---IFYIFLLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTF 237
Cdd:MTH00205 166 NFSLSMFFNFPLNFSDFylfLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 238 GVYNNFIFMMNSLLGGLIISLMCMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIM 317
Cdd:MTH00205 246 NSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVN 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 318 YERFGSRSLLLNKGLINFMPSMSFWWFMFISFNMAAPPSYNLFGEIMLFNSIMSWSYYLMLVLLFLSFFSALYSLYLYSY 397
Cdd:MTH00205 326 YERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQ 405
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 440655463 398 SQHGVYYSGLFSFCLGVFREYHLLFMHFYPLLILFLYSYLFI 439
Cdd:MTH00205 406 SQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
2-433 |
2.76e-94 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 291.26 E-value: 2.76e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 2 FCLIFLMPLCFFYNFWWVVHTLMFMLMFMYMFGYYTFSDYNMISINYGVDMFSFSLIMLSFLICSLMIMASSMIYLTFFY 81
Cdd:MTH00014 9 ISLLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 82 YNIFLFLILFLMLMLILSFSSMSLFSFYLFFESSLIPTLLLILGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTL 161
Cdd:MTH00014 89 PKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTN 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 162 GTLCFFMLYDFFEVDLIF---YIFLLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFG 238
Cdd:MTH00014 169 NSLSMLMSSMEPPSIYLMnlwWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHIN 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 239 VYNNFIFMMNSLLGGLIISLMCMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMY 318
Cdd:MTH00014 249 KSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTY 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 319 ERFGSRSLLLNKGLINFMPSMSFWWFMFISFNMAAPPSYNLFGEIMLFNSIMSWSYYLMLVLLFLSFFSALYSLYLYSYS 398
Cdd:MTH00014 329 ETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTST 408
|
410 420 430
....*....|....*....|....*....|....*
gi 440655463 399 QHGVYYSGLFSFCLGVFREYHLLFMHFYPLLILFL 433
Cdd:MTH00014 409 QHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILIL 443
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
49-433 |
6.79e-88 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 275.15 E-value: 6.79e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 49 GVDMFSFSLIMLSFLICSLMIMAS--SMIYLTFFYYNIFLFLILFLMLMLILSFSSMSLFSFYLFFESSLIPTLLLILGW 126
Cdd:MTH00124 57 GIDQISAPLLVLSCWLLPLMILASqnHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRW 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 127 GYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLYDF------FEVDLIFYIFLLLAFLIKIPMFIFHLWL 200
Cdd:MTH00124 137 GNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQLThptltnSWTNLLLWLACLMAFMVKMPLYGLHLWL 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 201 PKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYNNFIFMMNSLLGGLIISLMCMRQIDLKSLIAYSSVVHMSL 280
Cdd:MTH00124 217 PKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 281 VIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMSFWWFMFISFNMAAPPSYNLF 360
Cdd:MTH00124 297 VIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLM 376
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 440655463 361 GEIMLFNSIMSWSYYLMLVLLFLSFFSALYSLYLYSYSQHGVYYSGLFSFCLGVFREYHLLFMHFYPLLILFL 433
Cdd:MTH00124 377 GELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLIL 449
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
109-433 |
5.29e-86 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 270.25 E-value: 5.29e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLILGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLYDFFEV------DLIFYIF 182
Cdd:MTH00068 119 YIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLELMSPMqlmtytNKIWWLA 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 183 LLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYNNFIFMMNSLLGGLIISLMCMR 262
Cdd:MTH00068 199 CLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLR 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 263 QIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMSFW 342
Cdd:MTH00068 279 QTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATW 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 343 WFMFISFNMAAPPSYNLFGEIMLFNSIMSWSYYLMLVLLFLSFFSALYSLYLYSYSQHGVYYSGLFSFCLGVFREYHLLF 422
Cdd:MTH00068 359 WLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLA 438
|
330
....*....|.
gi 440655463 423 MHFYPLLILFL 433
Cdd:MTH00068 439 LHILPMLLLIL 449
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
37-433 |
1.13e-85 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 269.15 E-value: 1.13e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 37 TFSDYNMISINYGVDMFSFSLIMLSFLICSLMIMAS--SMIYLTFFYYNIFLFLILFLMLMLILSFSSMSLFSFYLFFES 114
Cdd:MTH00044 46 WSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASinHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFET 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 115 SLIPTLLLILGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLYDFFEVDL------IFYIFLLLAFL 188
Cdd:MTH00044 126 TLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLssnsssIWWIFCILAFL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 189 IKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYT-FGVYNNFIFMMNSLLGGLIISLMCMRQIDLK 267
Cdd:MTH00044 206 VKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLpSANNISFILIVFCCWGALITSIICLRQTDLK 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 268 SLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMSFWWFMFI 347
Cdd:MTH00044 286 ALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFC 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 348 SFNMAAPPSYNLFGEIMLFNSIMSWSYYLMLVLLFLSFFSALYSLYLYSYSQHGVYYSGLFSFCLGVFREYHLLFMHFYP 427
Cdd:MTH00044 366 AANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLP 445
|
....*.
gi 440655463 428 LLILFL 433
Cdd:MTH00044 446 LILIII 451
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
4-438 |
2.14e-80 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 255.25 E-value: 2.14e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 4 LIFLMPLCFFYNFWWVVHTLMFMLMFMYMFGYYTFSDYNMISINY--GVDMFSFSLIMLSFLICSLMIMAS--SMIYLTF 79
Cdd:MTH00206 9 LLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLylSYDPLSSPLVILSCWLLPLMFLASqnHMKNEPI 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 80 FYYNIFLFLILFLMLMLILSFSSMSLFSFYLFFESSLIPTLLLILGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYW 159
Cdd:MTH00206 89 NRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQN 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 160 TLGTLCFFMLYD---FFEVDLIFYIFLLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYT 236
Cdd:MTH00206 169 SLGSLSLYILYFsklTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGP 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 237 FGVYNNFIFMMNSLLGGLIISLMCMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNI 316
Cdd:MTH00206 249 STKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANL 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 317 MYERFGSRSLLLNKGLINFMPSMSFWWFMFISFNMAAPPSYNLFGEIMLFNSIMSWSYYLMLVLLFLSFFSALYSLYLYS 396
Cdd:MTH00206 329 LYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFV 408
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 440655463 397 YSQHGVYYSGLFSFCLGVFREYHLLFMHFYPLLILFLYSYLF 438
Cdd:MTH00206 409 MTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
109-433 |
1.28e-74 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 240.56 E-value: 1.28e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLILGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFML------YDFFEVDLIFYIF 182
Cdd:MTH00110 119 YILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLLqlwaqpLPNSWSNNLLWLA 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 183 LLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYNNFIFMMNSLLGGLIISLMCMR 262
Cdd:MTH00110 199 CMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLR 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 263 QIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMSFW 342
Cdd:MTH00110 279 QTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATW 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 343 WFMFISFNMAAPPSYNLFGEIMLFNSIMSWSYYLMLVLLFLSFFSALYSLYLYSYSQHGVYYSGLFSFCLGVFREYHLLF 422
Cdd:MTH00110 359 WLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMA 438
|
330
....*....|.
gi 440655463 423 MHFYPLLILFL 433
Cdd:MTH00110 439 LHLLPLLLLSL 449
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
49-433 |
1.85e-69 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 227.53 E-value: 1.85e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 49 GVDMFSFSLIMLSFLICSLMIMASS--MIYLTFFYYNIFLFLILFLMLMLILSFSSMSLFSFYLFFESSLIPTLLLILGW 126
Cdd:MTH00127 58 ATDPLSTPLLVLTCWLLPLMILASQnhTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRW 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 127 GYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFML------YDFFEVDLIFYIFLLLAFLIKIPMFIFHLWL 200
Cdd:MTH00127 138 GNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLqysqplQLSSWADKLWWAGCLLAFLVKMPLYGVHLWL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 201 PKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYNNFIFMMNSLLGGLIISLMCMRQIDLKSLIAYSSVVHMSL 280
Cdd:MTH00127 218 PKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGL 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 281 VIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMSFWWFMFISFNMAAPPSYNLF 360
Cdd:MTH00127 298 VAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLM 377
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 440655463 361 GEIMLFNSIMSWSYYLMLVLLFLSFFSALYSLYLYSYSQHGVYYSGLFSFCLGVFREYHLLFMHFYPLLILFL 433
Cdd:MTH00127 378 GELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLIL 450
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
109-384 |
1.82e-49 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 169.80 E-value: 1.82e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLILGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLYDFFEVD------LIFYIF 182
Cdd:pfam00361 8 YLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssglLLLFLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 183 LLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYNNFIFMMNSLLGGLIISLMCMR 262
Cdd:pfam00361 88 ILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGSLAALV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 263 QIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLS-NIMYERFGSRSLLLNKGLINFMPSMSF 341
Cdd:pfam00361 168 QTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKTMPILAL 247
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 440655463 342 WWFMFISFNMAAPPSYNLFGEIMLFNSIMSWSYYLMLVLLFLS 384
Cdd:pfam00361 248 VFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
109-388 |
1.97e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 166.78 E-value: 1.97e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLILGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLYD---FFEVDLIFYIFLLL 185
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNiklPLSIQKWLLVGFFL 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 186 AFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVM-NIVYTFGVYNNFIFMMNSLLGGLIISLMCMRQI 264
Cdd:MTH00204 218 SLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSwPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQV 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 265 DLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMSFWWF 344
Cdd:MTH00204 298 DFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIML 377
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 440655463 345 MFISFNMAAPPSYNLFGEIMLFNSIMSWSYYLMLVLLFLSFFSA 388
Cdd:MTH00204 378 VLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSA 421
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
109-388 |
7.30e-45 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 162.56 E-value: 7.30e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLILGWGYqPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLyDFFEVDL------IFYIF 182
Cdd:COG1008 137 YVFWELMLIPMYFLIGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIA-ELAAAPLpltaqlLLFLA 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 183 LLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYR-VMNIVYTFGVYNNFIFMMNSLLGGLIISLMCM 261
Cdd:COG1008 215 FFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRfALPLFPEASAYFAPLLAALGVIGIIYGALVAL 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 262 RQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMSF 341
Cdd:COG1008 295 AQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAA 374
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 440655463 342 WWFMFISFNMAAPPSYNLFGEIMLFNSIMSWSYYLMLVLLFLSFFSA 388
Cdd:COG1008 375 LFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTA 421
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
109-375 |
1.41e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 161.76 E-value: 1.41e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLILGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLYDF-FEVDLIFYIFLL--L 185
Cdd:MTH00217 135 YILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLkIEKELQYFIFLGffL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 186 AFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGV-YNNFIFMMNSLLGGLIISLMCMRQI 264
Cdd:MTH00217 215 SLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASeYFSPLIQTLSLLAIIYGSLTTCRQV 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 265 DLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMSFWWF 344
Cdd:MTH00217 295 DLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILML 374
|
250 260 270
....*....|....*....|....*....|.
gi 440655463 345 MFISFNMAAPPSYNLFGEIMLFNSIMSWSYY 375
Cdd:MTH00217 375 LLVLANASIPLSCNFVGEFLSLLAAFEYSYI 405
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
48-373 |
7.64e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 149.30 E-value: 7.64e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 48 YGVDMFSFSLIMLSFLI--CSLMIMASSMIYLTffyyNIFLFLILFLMLMLILSFSSMSLFSFYLFFESSLIPTLLLILG 125
Cdd:MTH00226 98 FAVDGISIYFIILTGFIvpCSILISWHSVKYLT----KSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 126 WGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLYDFFEV---DLIFYIFL--LLAFLIKIPMFIFHLWL 200
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVvseQTQKWIFLgiFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 201 PKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYNNFIFMMNSLLGGLII-SLMCMRQIDLKSLIAYSSVVHMS 279
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYgSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 280 LVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMSFWWFMFISFNMAAPPSYNL 359
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330
....*....|....
gi 440655463 360 FGEIMLFNSIMSWS 373
Cdd:MTH00226 414 IGEYLSILSSFNWN 427
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
44-366 |
1.88e-39 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 147.78 E-value: 1.88e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 44 ISINYGVDMFSFSLIMLSFLICSLMIMASSmiYLTFFYYNIFLFLILFLMLMLILSFSSMSLFSFYLFFESSLIPTLLLI 123
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASW--ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 124 LGWGyQPERLQAGIYLIFYTLFASLP----LLLCLLKVYWTLGTLCFFMLYDFFEVDLIFYIFLLLAFLIKIPMFIFHLW 199
Cdd:TIGR01972 147 GVWG-GPNRIYAAMKFFLYTLAGSLLmllaILGLYFLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 200 LPKAHVEAPISGSMILAGVLLKLGGYGIYRV-MNIVYTFGVYNNFIFMMNSLLGGLIISLMCMRQIDLKSLIAYSSVVHM 278
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHM 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 279 SLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMSFWWFMFISFNMAAPPSYN 358
Cdd:TIGR01972 306 GFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSG 385
|
....*...
gi 440655463 359 LFGEIMLF 366
Cdd:TIGR01972 386 FVGEFLIL 393
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
38-432 |
7.49e-37 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 139.27 E-value: 7.49e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 38 FSDYNMISINYGVDMFSFSLIMLSFLICSLMIMASSMIYLTFFYYNIFLFLILFLMLMLILSFSsmslfsfYLFFESSLI 117
Cdd:MTH00094 24 FNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNLLILSNLLILICLLFFVSSNMLML-------YMFFELSMF 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 118 PTLLLILGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYwtlgtLCFFMLYDFFEVDLIFYIFLLLAFLIKIPMFIFH 197
Cdd:MTH00094 97 PILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNF-----FFFSLCYFDFFLSWEMFFILSLSFMMKFPVYFLH 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 198 LWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNivyTFGVYNNFIFMMNSLLGGLIISLMCMRQIDLKSLIAYSSVVH 277
Cdd:MTH00094 172 LWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILG---SLNFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTH 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 278 MSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMSFWWFMFISFNMAAPPSY 357
Cdd:MTH00094 249 MSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSL 328
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 440655463 358 NLFGEIMLFNSIMSWSYYLMLVLLFLSFFSALYSLYLYSYSQHGVYYSGLFSFCLGVFREYHLLFMHFYPLLILF 432
Cdd:MTH00094 329 SFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVFMMFNMFWLSLFY 403
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
109-366 |
1.35e-36 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 140.34 E-value: 1.35e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLILGWGYqPERLQAGIYLIFYTLFASLPLLLCLLKVYWT----LGTLCFFMLYDF-FEVDLIFYIFL 183
Cdd:PRK05846 137 YVFFEAMLIPMYFLIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLpLPPGVQYWLFL 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 184 --LLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVM-NIVYTFGVYNNFIFMMNSLLGGLIISLMC 260
Cdd:PRK05846 216 afFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSlPLFPDASHEFAPIIITLGVIAIIYGALVA 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 261 MRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMS 340
Cdd:PRK05846 296 LAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLA 375
|
250 260
....*....|....*....|....*.
gi 440655463 341 FWWFMFISFNMAAPPSYNLFGEIMLF 366
Cdd:PRK05846 376 AFFLFFAMASLGLPGTSGFVGEFLIL 401
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
109-384 |
7.99e-30 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 120.25 E-value: 7.99e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLILGWGYqPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLYDFF-----EVDLIFYIFL 183
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGT-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLaeldpGLLLAAFALL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 184 LLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYNNF--IFMMNSLLGGLIISLMCM 261
Cdd:COG0651 212 LVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFLgtLLLVLGLLTMLVGALGAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 262 RQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPsMSF 341
Cdd:COG0651 292 AQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMP-LTA 370
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 440655463 342 WWFMFISFNMAA-PPSYNLFGEIMLFNSIMSWSYYLMLVLLFLS 384
Cdd:COG0651 371 AAFLIGALALAGlPPLSGFVSKWLLLQAALEAGAWLLAAVLLLS 414
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
110-371 |
2.33e-26 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 111.28 E-value: 2.33e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 110 LFF---ESSLIPTLLLILGWGYQpERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFM----LYDF-FEVDLIFYI 181
Cdd:PRK12561 111 LFFlmwELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLaelgAKSYpLALELLLYA 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 182 FLLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYR---------------------VMNIVYtfGVY 240
Cdd:PRK12561 190 GFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRfnvqmlpdahvyfapalailgVVNIIY--GAL 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 241 NNFifmmnsllggliislmcmRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYER 320
Cdd:PRK12561 268 NAF------------------AQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYER 329
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 440655463 321 FGSRSLLLNKGLINFMPsMSFWWFMFISFNMAAPPSYNLF-GEIMLFNSIMS 371
Cdd:PRK12561 330 THTLSIPNMGGLAKVMP-KTFALFTASSMASLALPGMSGFvSELTVFLGITS 380
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
44-334 |
3.23e-25 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 107.86 E-value: 3.23e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 44 ISINYGVDMFSFSLIMLSFLICSLMIMASSM-IYLTFFYYNIFLFLILFLMLMLILSFSSMSlfsfYLFFESSLIPTLLL 122
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSDEsIQRPRFYYSLLLLLNAGVSGAFLAQDLLLF----FLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 123 ILGWGYQpERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFfmLYDFFEVD-------LIFYIFLLLAFLIKIPMFI 195
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSF--DYEPLRSHtlplstqLLLLAPILVGFGIKIPLVP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 196 FHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRV-MNIVYTFGVYNNFIFMMNSLLGGLIISLMCMRQIDLKSLIAYSS 274
Cdd:PRK06473 224 FHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFgVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSS 303
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 275 VVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLIN 334
Cdd:PRK06473 304 IGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
110-388 |
9.22e-22 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 97.32 E-value: 9.22e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 110 LFF---ESSLIPTLLLILGWGYQpERLQAGIYLIFYTLFASLPLLLCLLkvywtlgTLCFFM----LYDF---------F 173
Cdd:CHL00011 136 LFFimwELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVL-------GMGLYGsnepTLNFetlanqsypV 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 174 EVDLIFYIFLLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRvmnIVYTFGVYNNFIFMMNSLLGG 253
Cdd:CHL00011 208 ALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIR---INMELLPHAHSIFSPWLVIVG 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 254 LI----ISLMCMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERfgSRSLLLN 329
Cdd:CHL00011 285 AIqiiyAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDR--IRLVYLD 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 440655463 330 K--GLINFMPSMsfwWFMFISFNMAA---PPSYNLFGEIMLFNSIMSWSYYLMLVLLFLSFFSA 388
Cdd:CHL00011 363 EmgGIAIPMPKI---FTMFSSFSMASlalPGMSGFVAELIVFFGIITSQKYLLMPKILITFVMA 423
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
177-384 |
3.01e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 96.19 E-value: 3.01e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 177 LIFYIFLLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYNN-------FIFMMNS 249
Cdd:PRK12667 223 GVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIdfraalsPILIILG 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 250 LLGGLIISLMCMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLN 329
Cdd:PRK12667 303 AVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDEL 382
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 440655463 330 KGLINFMPSMSFWWFMFISFNMAAPPSYNLFGEIMLFNSIMSWSYYLMLVLLFLS 384
Cdd:PRK12667 383 AGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIA 437
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
109-366 |
7.05e-21 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 94.77 E-value: 7.05e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLILGWGYQpERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFM----LYDF-FEVDLIFYIFL 183
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMtalaAKDFgLGFQLLCYAGL 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 184 LLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRvMNIVYTFGVYNNFIFMMNSLLGGLII--SLMCM 261
Cdd:PRK02546 220 LIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLR-MNAGMLPDAHAQFAPLLIVLGVVNIIyaALTSF 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 262 RQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERfgSRSLLLNK--GLINFMPSM 339
Cdd:PRK02546 299 AQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDR--THTLMLDEmgGVGQKMRKM 376
|
250 260
....*....|....*....|....*..
gi 440655463 340 SFWWFMFISFNMAAPPSYNLFGEIMLF 366
Cdd:PRK02546 377 FAMWTACSLASLALPGMSGFVAELMVF 403
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-388 |
5.24e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 89.17 E-value: 5.24e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLIlGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLYDFF----EVDLIFYiFLL 184
Cdd:PRK08375 132 FVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALaenpTVVTAFG-FVL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 185 LAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYN----NFIFMMNSLLGGLIISLMC 260
Cdd:PRK08375 210 LALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFalglGWLLAVLALLSMLVGSLAA 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 261 MRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPsms 340
Cdd:PRK08375 290 LGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMP--- 366
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 440655463 341 fwwFMFISFNMAA------PPSYNLFGEIMLFNSIMS-WSYYLMLVLLFLSFFSA 388
Cdd:PRK08375 367 ---LTAAAFAVASlsligvPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLAL 418
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
180-388 |
5.66e-19 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 88.83 E-value: 5.66e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 180 YIFLLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVmNIVYTFGVYNNF---IFMMNSLLGGLII 256
Cdd:PRK06458 217 FVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRY-YILIDAAIGSDFpgrLLLIFGLLSVLVA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 257 SLMCMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFM 336
Cdd:PRK06458 296 AFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVS 375
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 440655463 337 PSMSfWWFMFISFNMAAPPSYNLF-GEIMLFNSIMSWSYYLMLVLLFLSFFSA 388
Cdd:PRK06458 376 PLTG-WGLMLGALAIAGMPPFGVFiSEFLILTAGLARGPLLIAILLLLLLTLA 427
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
109-334 |
3.27e-17 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 83.61 E-value: 3.27e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLILGWGYQpERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLYDFFE-----VDLIFYIFL 183
Cdd:PRK07363 133 FLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQnlslnTQLILLTGL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 184 LLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRvmnivytFGVyNNFIFMMNSLLGGLII------- 256
Cdd:PRK07363 212 LLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLR-------FGL-QLFPQTWSLVAPGLAIigtisvi 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 257 --SLMCMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLIN 334
Cdd:PRK07363 284 ygALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMN 363
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-366 |
9.66e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 73.08 E-value: 9.66e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLiLGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLYDFFE-----VDLIFYIFL 183
Cdd:PRK12665 137 YVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDelpsgTRTALFAVL 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 184 LLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYNNfIFMMNSLLGGLIISLMCMRQ 263
Cdd:PRK12665 216 LVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGGLDT-LLMVVALLTMVVGILGAIAQ 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 264 IDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMSFWW 343
Cdd:PRK12665 295 SDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLF 374
|
250 260
....*....|....*....|....
gi 440655463 344 FMfISFNMAA-PPSYNLFGEIMLF 366
Cdd:PRK12665 375 FV-PALNLGGiPPFSGFIGKVALL 397
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
157-386 |
2.71e-13 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 71.57 E-value: 2.71e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 157 VYWTLGTLCFFMLYDFFEVD------LIFYIFLLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRV 230
Cdd:PRK08668 170 IYAKTGTFDFADISQGLINDtstgfaLIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLV 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 231 MNIVYTFGVYNNFIFMMN--------SLLGGLII---SLMCMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIIL 299
Cdd:PRK08668 250 LYVLPGTKLFSEFGTYRGvplfnyilAWLGNISIivgTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFH 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 300 MLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPsMSFWWFMFISFNMAA-PPSYNLFGEIMLFNSIMSWSyylML 378
Cdd:PRK08668 330 VFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMP-FTFAMYLVAIISLAGiPPMSGFASKWLIFEALISKG---MP 405
|
....*...
gi 440655463 379 VLLFLSFF 386
Cdd:PRK08668 406 ITAFMAFF 413
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
110-368 |
1.32e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 69.76 E-value: 1.32e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 110 LFFESSLIPTLLLILGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLYDFFEVDLIFYIFLLLAFLI 189
Cdd:PRK08667 138 FFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 190 KIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYNNFIFMMNSLLGGLIISLMCMRQIDLKSL 269
Cdd:PRK08667 218 KAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGL 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 270 IAYSSVVHMSLV-----------IFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPS 338
Cdd:PRK08667 298 LAYSSIENIGIIlmgiglyvifgVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPY 377
|
250 260 270
....*....|....*....|....*....|
gi 440655463 339 MSFWWFMFISFNMAAPPSYNLFGEIMLFNS 368
Cdd:PRK08667 378 TSALFLVGAVSIAALPPFNGFASELLLYES 407
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
37-385 |
2.87e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 68.03 E-value: 2.87e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 37 TFSDYNMISINYGVDMFSFSLIMLSFLICSLMIMASSMIYLTFFYYNIFLFLILFLMLMLILSFSSMSLFSFYLFFESSL 116
Cdd:MTH00062 25 GVGCCILVVNNVFNGLFIFDSLSFYLILLVLFLGLYSQVMFYNLLSGVSRFFLFLSLIFSILCFCVNNSLLFWFFYELSI 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 117 IPTLLLILGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLYDFFEVDLIFYIFLLLAFLIKIPMFIF 196
Cdd:MTH00062 105 IPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLIVYYVLSFMFITKVPLFPF 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 197 HLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYNNFIFMMNSLLGGLIISlmcMRQIDLKSLIAYSSVV 276
Cdd:MTH00062 185 HTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLITA---CSELDGKRWLAFLSLS 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 277 HMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMSfwWFMFISFNMAA--P 354
Cdd:MTH00062 262 HILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLR--VIVVFSFLSLCsfP 339
|
330 340 350
....*....|....*....|....*....|.
gi 440655463 355 PSYNLFGEIMLFNSIMSWSYYLMLVLLFLSF 385
Cdd:MTH00062 340 PTIQFFCEVFLVSSSFGVLVYLLFWCFYLFF 370
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
177-388 |
9.50e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 66.70 E-value: 9.50e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 177 LIFYIFLLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYNNFIFMMnSLLGGLII 256
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVL-IGLGIFSI 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 257 SLMC---MRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLI 333
Cdd:PRK08676 285 AVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVF 364
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 440655463 334 NFMPsMSFWWFMFISFNMAAPPSYNLF-GEIMLFNSIMSWSYYLMLVLLFLSFFSA 388
Cdd:PRK08676 365 RLQP-VAAWGVILGSAAIIGMPPFPLFlSKFFILLQLGGISVWLVLAVLLLLLLAA 419
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-320 |
7.23e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 60.74 E-value: 7.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLIlGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCF--FMLYDFFEVDLIFyifllLA 186
Cdd:PRK07234 120 YVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFsgLATADPEAFALIA-----LG 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 187 FLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYNNFIFMMNSLLGgliiSLMCMRQIDL 266
Cdd:PRK07234 194 LLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDL 269
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 440655463 267 KSLIAYSSVVHMSLVIFGlmtmnmwGMVGMiILMLGHGLCSSGLFCLSNIMYER 320
Cdd:PRK07234 270 KRMLAFSTISQLGFILAA-------PLVGG-LYALAHGLVKSTLFLCAGALPSR 315
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-360 |
2.99e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 55.87 E-value: 2.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLILGWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVY-----WTLGTLCFFMLYDFFEVDLIFYIFL 183
Cdd:PRK08376 147 FVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYgqygtLNMAYLAVKMSENPTVVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 184 LLAFLIKIPMFIFHLWLPKAHVEAPISGSMILagVLLKLGG-YGIYRVMNIVYTFGVYNNFIFMMNSLLGGL---IISLM 259
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAINLATVGWVIIILGCLtmfVGVAM 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 260 CMRQIDLKSLIAYSSV---------VHMSLVIFGLMTMNMWGMVGM---IILMLGHGLCSSGLFCLSNIMYERFGSRSLL 327
Cdd:PRK08376 305 AVVQKDVKRLLAYHSVsqigymllgLGVGLAALGDPAMASYGEIALaggIYHIVNHALYKALLFLTAGAVIYETGTRNLN 384
|
250 260 270
....*....|....*....|....*....|...
gi 440655463 328 LNKGLINFMPSMSFwWFMFISFNMAAPPSYNLF 360
Cdd:PRK08376 385 ELGGLARTMPKTTI-AFLIGAAAIVGLPPFNGF 416
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
181-381 |
1.71e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 53.20 E-value: 1.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 181 IFLLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYT-----FGVYNNFIFMMNSLLGGLI 255
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKanfvfTTLPFNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 256 ISLMCMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINF 335
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKS 372
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 440655463 336 MPSMSFWWFMFISFNMAAPPSYNLFGEIMLFNSIMSWSYYLMLVLL 381
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVL 418
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-386 |
2.13e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 53.03 E-value: 2.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLILgWGYQPERLQAGIYLIFYTLFASLPLLLCLLKVYWTLGTLCFF-------MLYDFFEVdLIFYI 181
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAhiamrlnDMGDTATL-TTIAL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 182 FLLLAFLIKIPMFIFHlWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMniVYTFGVYNNFIFMMNSLLGGLII---SL 258
Cdd:PRK12663 212 LFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVF--TLLFPQERELLHPLLATMAAITMvigAL 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 259 MCMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPS 338
Cdd:PRK12663 289 GALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPL 368
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 440655463 339 MSFWWFMFISFNMAAPPSYNLFGEIMLFNSIMSWSYYLMLVLLFLSFF 386
Cdd:PRK12663 369 FGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSL 416
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
178-384 |
3.70e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 52.26 E-value: 3.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 178 IFYIFLLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVynNFIFMMNSLLGGLIIS 257
Cdd:PRK07691 210 VVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDT--SFTHYLILILALLTII 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 258 LMCMRQI---DLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLIN 334
Cdd:PRK07691 288 FGVIGAVayfDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIK 367
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 440655463 335 FMPSMSfWWFMFISFNMAA-PPSYNLFGEIMLFNSIMSWSYYLMLVLLFLS 384
Cdd:PRK07691 368 RYPVLG-WMFFIAALSLAGiPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLS 417
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
183-337 |
4.58e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 49.12 E-value: 4.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 183 LLLAFL---IKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVM------------NIVYTFGVYnnfifmm 247
Cdd:PRK06521 213 FLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVfdllgapgwwwgVLVLALGAI------- 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 248 nSLLGGLIISLMcmrQIDLKSLIAYSSVVHMSLVIFGL---MTMNMWGMVGMIIL--------MLGHGLCSSGLFCLSNI 316
Cdd:PRK06521 286 -SAVLGVLYALA---EHDLKRLLAYSTIENIGIIFVGLglaMVFIAYGMPLLAALaltaalyhLLNHALFKSLLFLGAGA 361
|
170 180
....*....|....*....|.
gi 440655463 317 MYERFGSRSLLLNKGLINFMP 337
Cdd:PRK06521 362 VLHATGTRDMEKLGGLIRRMP 382
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
183-341 |
3.58e-05 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 45.91 E-value: 3.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 183 LLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVMNIVYTFGVYNNFIFMM--NSLLGGLIISLMC 260
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLViiMATLTVFFAELSA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 261 MRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMPSMS 340
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
.
gi 440655463 341 F 341
Cdd:PRK08377 372 L 372
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
185-361 |
8.42e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 45.03 E-value: 8.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 185 LAFLI------KIPMFIFHLWLPKAHVEA-PISGSMILAGVLlKLGGYGIYRVMNIVYTFGVYNnFIFMMNSLLGGLIIS 257
Cdd:PRK12650 210 VAVLIavaaftKSAQFPFHFWLPEAMAAItPVSAFLHAAAVV-KAGIYLLLRFSPVFHDVAVWN-WLLIIVGMITALMGA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 258 LMCMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSLLLNKGLINFMP 337
Cdd:PRK12650 288 VFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP 367
|
170 180
....*....|....*....|....*
gi 440655463 338 sMSFWWFMFISFNMAA-PPsynLFG 361
Cdd:PRK12650 368 -FTFVSVTIAALSMAAvPP---LFG 388
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
181-311 |
1.40e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.04 E-value: 1.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 181 IFLLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVlLKLGGYGIyrVMNIVYTF----GVYNNFIFMMNSLLGGLII 256
Cdd:PRK05777 208 VFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATA-PKIAAFAV--LLRLLVVAfgglSEDWQQVLAIIAIASMLVG 284
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 440655463 257 SLMCMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLF 311
Cdd:PRK05777 285 NLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-326 |
2.89e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 42.88 E-value: 2.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 109 YLFFESSLIPTLLLIlGWGYQPERLQAGI-YLIFYTLFASLPLLLCLLKVYWTLGTLCFFMLYDFFEVDLIFYIFLLLAF 187
Cdd:PRK06589 142 FVCYELLTISTAFLI-GHTRNNISLSGGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYG 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 188 LIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVmnIVYTFGV-YNNFIFMMNSLLGGLII------SLMC 260
Cdd:PRK06589 221 IAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKI--LLYIFGLsYLQRIFAEFNWLIFIPIvsifysSLKA 298
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 440655463 261 MRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSL 326
Cdd:PRK06589 299 LKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQV 364
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
182-368 |
4.53e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 42.51 E-value: 4.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 182 FLLLAFLIKIpmfifHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRVM----NIVYTFGVYNNFIFMMNSLLGGLiIS 257
Cdd:PRK08042 190 FGLLAGIIPL-----HGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSllggNAPLWWGVALLVLGMITAFVGGL-YA 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 258 LMcmrQIDLKSLIAYSSVVHMSLVIFGL-----------MTMNMWGMVGMIILMLGHGLCSSGLFCLSNIMYERFGSRSL 326
Cdd:PRK08042 264 LM---EHNIQRLLAYHTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDI 340
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 440655463 327 LLNKGLINFMPSMSFwwFMFISF-NMAAPPSYNLF-GEIMLFNS 368
Cdd:PRK08042 341 EKLGGIGKKMPVISI--AMLVGLmAMAALPPLNGFaGEWVIYQS 382
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
181-383 |
6.30e-04 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 42.03 E-value: 6.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 181 IFLLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLlKLGGYGI-YRVMniVYTFGVYNNFIFMMNSLLGGLII--- 256
Cdd:COG1007 207 VLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLL--VEAFPGLAADWQLLLAVLAVLSMtvg 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 257 SLMCMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLF-CLSNIMYERFGSRSLLLNKGLINF 335
Cdd:COG1007 284 NLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARR 363
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 440655463 336 MPSMSFwwFMFIS-FNMA-APPSYNLFGEIMLFNSIMSWSYYLMLVLLFL 383
Cdd:COG1007 364 SPLLAL--AMTIFlLSLAgIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVL 411
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
174-383 |
2.16e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 40.34 E-value: 2.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 174 EVDLIFYIFLLLAFLIKIPMFIFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIYRVMNIVYTFGVYNNFIFMMNSLLG 252
Cdd:PRK06525 204 SLKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVT 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 253 GLIISLMCMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILML---GHGLCSSGLFCLSNIMYERFGSRSLLLN 329
Cdd:PRK06525 283 LLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSRLALEGSIAyifNHAFAKSLFFLVAGALSYSCGTRLLPRL 362
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 440655463 330 KGLINFMPSMSFWWFmFISFNMAAPPSYNLF-GEIMLFNS--IMSWSYYLMLVLLFL 383
Cdd:PRK06525 363 RGVLKKLPLVGVGFC-VAALAITGVPPFNGFfSKFPIFAAgfELSVEYWILLPAMVL 418
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
181-384 |
3.17e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 39.55 E-value: 3.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 181 IFLLLAFLIKIPMFIFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIYRV-MNIVYTFGVYNNFIFMMNSLLGGLIISLM 259
Cdd:TIGR01770 207 VLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLfLYILFGFSEAWQIFLAIIAFLSMLIGNFG 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 260 CMRQIDLKSLIAYSSVVHMSLVIFGLMTMNMWGMVGMIILMLGHGLCSSGLFCLSNIM--YERFGSRSLLLNKGLINFMP 337
Cdd:TIGR01770 287 ALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFGVLSLLrsYKDEWIEYISDFAGLFKTNP 366
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 440655463 338 SMSFWWFMFISFNMAAPPSYNLFGEIMLFNSIMSWSYYLMLVLLFLS 384
Cdd:TIGR01770 367 ILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLT 413
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-78 |
4.28e-03 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 36.73 E-value: 4.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440655463 1 MFCLIFLMPLCFFYNFWW-----VVHTLMFMLMFMYMFGYYTFSDYNMISINYGVDMFSFSLIMLSFLICSLMIMASSMI 75
Cdd:pfam01059 5 LLPTLMLIPLTFLSKPKWlwttsTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILASQKH 84
|
...
gi 440655463 76 YLT 78
Cdd:pfam01059 85 LKS 87
|
|
| |
