D-methionine transport system permease metI [Escherichia coli KTE180]
methionine ABC transporter permease MetI( domain architecture ID 10793476)
methionine ABC transporter permease MetI is part of the binding-protein-dependent transport system for D-methionine and the toxic methionine analog alpha-methyl-methionine
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
PRK10782 | PRK10782 | D-methionine ABC transporter permease MetI; |
1-217 | 4.15e-135 | ||||
D-methionine ABC transporter permease MetI; : Pssm-ID: 182726 Cd Length: 217 Bit Score: 377.54 E-value: 4.15e-135
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Name | Accession | Description | Interval | E-value | ||||
PRK10782 | PRK10782 | D-methionine ABC transporter permease MetI; |
1-217 | 4.15e-135 | ||||
D-methionine ABC transporter permease MetI; Pssm-ID: 182726 Cd Length: 217 Bit Score: 377.54 E-value: 4.15e-135
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MetP | COG2011 | ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; ... |
1-217 | 7.96e-90 | ||||
ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; Pssm-ID: 441614 Cd Length: 220 Bit Score: 263.07 E-value: 7.96e-90
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TM_PBP2 | cd06261 | Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
14-177 | 1.06e-13 | ||||
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others. Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 66.53 E-value: 1.06e-13
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PhnE | TIGR01097 | phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound ... |
9-147 | 1.60e-10 | ||||
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions] Pssm-ID: 273441 [Multi-domain] Cd Length: 250 Bit Score: 58.71 E-value: 1.60e-10
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BPD_transp_1 | pfam00528 | Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
49-217 | 4.92e-09 | ||||
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices. Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 53.84 E-value: 4.92e-09
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Name | Accession | Description | Interval | E-value | ||||
PRK10782 | PRK10782 | D-methionine ABC transporter permease MetI; |
1-217 | 4.15e-135 | ||||
D-methionine ABC transporter permease MetI; Pssm-ID: 182726 Cd Length: 217 Bit Score: 377.54 E-value: 4.15e-135
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MetP | COG2011 | ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; ... |
1-217 | 7.96e-90 | ||||
ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; Pssm-ID: 441614 Cd Length: 220 Bit Score: 263.07 E-value: 7.96e-90
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OpuBB | COG1174 | ABC-type proline/glycine betaine transport system, permease component [Amino acid transport ... |
13-144 | 2.95e-16 | ||||
ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism]; Pssm-ID: 440787 [Multi-domain] Cd Length: 212 Bit Score: 73.94 E-value: 2.95e-16
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HisM | COG0765 | ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; ... |
8-148 | 3.67e-15 | ||||
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; Pssm-ID: 440528 [Multi-domain] Cd Length: 218 Bit Score: 71.26 E-value: 3.67e-15
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PstC | COG0573 | ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
12-150 | 9.70e-14 | ||||
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]; Pssm-ID: 440338 [Multi-domain] Cd Length: 303 Bit Score: 68.58 E-value: 9.70e-14
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TM_PBP2 | cd06261 | Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
14-177 | 1.06e-13 | ||||
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others. Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 66.53 E-value: 1.06e-13
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TauC | COG0600 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ... |
9-158 | 8.80e-13 | ||||
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]; Pssm-ID: 440365 [Multi-domain] Cd Length: 254 Bit Score: 65.17 E-value: 8.80e-13
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PhnE | COG3639 | ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport ... |
6-148 | 1.16e-12 | ||||
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism]; Pssm-ID: 442856 [Multi-domain] Cd Length: 244 Bit Score: 64.72 E-value: 1.16e-12
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PstA | COG0581 | ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
16-154 | 1.13e-10 | ||||
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]; Pssm-ID: 440346 [Multi-domain] Cd Length: 259 Bit Score: 59.28 E-value: 1.13e-10
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PhnE | TIGR01097 | phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound ... |
9-147 | 1.60e-10 | ||||
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions] Pssm-ID: 273441 [Multi-domain] Cd Length: 250 Bit Score: 58.71 E-value: 1.60e-10
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DppC | COG1173 | ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ... |
9-156 | 1.82e-09 | ||||
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism]; Pssm-ID: 440786 [Multi-domain] Cd Length: 275 Bit Score: 55.89 E-value: 1.82e-09
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BPD_transp_1 | pfam00528 | Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
49-217 | 4.92e-09 | ||||
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices. Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 53.84 E-value: 4.92e-09
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phosphate_pstC | TIGR02138 | phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ... |
20-154 | 1.03e-08 | ||||
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions] Pssm-ID: 273992 [Multi-domain] Cd Length: 295 Bit Score: 54.20 E-value: 1.03e-08
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FbpB | COG1178 | ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
9-155 | 5.99e-08 | ||||
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 52.09 E-value: 5.99e-08
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PotC | COG1177 | ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
9-156 | 4.30e-07 | ||||
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]; Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 48.95 E-value: 4.30e-07
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FbpB | COG1178 | ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
9-159 | 6.13e-07 | ||||
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 49.00 E-value: 6.13e-07
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PotB | COG1176 | ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
102-159 | 1.16e-06 | ||||
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]; Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 47.83 E-value: 1.16e-06
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UgpE | COG0395 | ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
68-160 | 1.41e-06 | ||||
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism]; Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 47.78 E-value: 1.41e-06
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PRK15050 | PRK15050 | 2-aminoethylphosphonate transport system permease PhnU; Provisional |
101-155 | 1.44e-06 | ||||
2-aminoethylphosphonate transport system permease PhnU; Provisional Pssm-ID: 237888 [Multi-domain] Cd Length: 296 Bit Score: 47.69 E-value: 1.44e-06
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glnP | PRK09494 | glutamine ABC transporter permease protein; Reviewed |
6-143 | 1.72e-06 | ||||
glutamine ABC transporter permease protein; Reviewed Pssm-ID: 181907 [Multi-domain] Cd Length: 219 Bit Score: 46.97 E-value: 1.72e-06
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PRK10952 | PRK10952 | proline/glycine betaine ABC transporter permease ProW; |
16-155 | 8.24e-06 | ||||
proline/glycine betaine ABC transporter permease ProW; Pssm-ID: 236805 Cd Length: 355 Bit Score: 45.47 E-value: 8.24e-06
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PRK15107 | PRK15107 | glutamate/aspartate ABC transporter permease GltK; |
4-147 | 1.43e-05 | ||||
glutamate/aspartate ABC transporter permease GltK; Pssm-ID: 185062 [Multi-domain] Cd Length: 224 Bit Score: 44.44 E-value: 1.43e-05
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DppB | COG0601 | ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ... |
8-159 | 3.33e-05 | ||||
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism]; Pssm-ID: 440366 [Multi-domain] Cd Length: 314 Bit Score: 43.52 E-value: 3.33e-05
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PRK10971 | PRK10971 | sulfate/thiosulfate ABC transporter permease CysT; |
74-159 | 3.93e-04 | ||||
sulfate/thiosulfate ABC transporter permease CysT; Pssm-ID: 182873 Cd Length: 277 Bit Score: 40.51 E-value: 3.93e-04
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cysT | CHL00187 | sulfate transport protein; Provisional |
85-153 | 5.05e-03 | ||||
sulfate transport protein; Provisional Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 36.92 E-value: 5.05e-03
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HEQRo_perm_3TM | TIGR01726 | amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; This ... |
6-74 | 7.70e-03 | ||||
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; This model represents one of several classes of multiple membrane spanning regions found immediately N-terminal to the domain described by pfam00528, binding-protein-dependent transport systems inner membrane component. The region covered by this model generally is predicted to contain three transmembrane helices. Substrate specificities attributed to members of this family include histidine, arginine, glutamine, glutamate, and (in Agrobacterium) the opines octopine and nopaline. [Transport and binding proteins, Amino acids, peptides and amines] Pssm-ID: 130787 [Multi-domain] Cd Length: 99 Bit Score: 34.82 E-value: 7.70e-03
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nikC | PRK10417 | nickel transporter permease NikC; Provisional |
59-152 | 7.97e-03 | ||||
nickel transporter permease NikC; Provisional Pssm-ID: 236687 [Multi-domain] Cd Length: 272 Bit Score: 36.57 E-value: 7.97e-03
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ssuC | PRK11365 | aliphatic sulfonate ABC transporter permease SsuC; |
13-147 | 9.71e-03 | ||||
aliphatic sulfonate ABC transporter permease SsuC; Pssm-ID: 183100 Cd Length: 263 Bit Score: 36.07 E-value: 9.71e-03
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Blast search parameters | ||||
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