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Conserved domains on  [gi|415434279|emb|CCK74119|]
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protein of unknown function [Pseudotevenvirus RB43]

Protein Classification

34 family protein( domain architecture ID 11476038)

34 family protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
34 PHA02584
long tail fiber, proximal subunit; Provisional
1-1219 0e+00

long tail fiber, proximal subunit; Provisional


:

Pssm-ID: 222890 [Multi-domain]  Cd Length: 1229  Bit Score: 1672.21  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279    1 MVAKSFRATSGLDAAGEKVINVGKASRSVLSDGVNVDFFNEFNTVQQYDPARGYSAFMAIIYARHIWYARADIASPAGAF 80
Cdd:PHA02584    3 DIKQAFRATSGLDAAGEKVINVAKADKNVLTDGVNVDFFIDENTIQQYDPTRGYDKDFAVIYNNRIYYAKADITAPAGAF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279   81 DETKWISTRNDPKWVYNNVTSvDGLPVESGTYLMADGRFSELTYILPDAPVEGDIITIKDGGGMVGINSMLVRS-NTRQI 159
Cdd:PHA02584   83 DPTKWKATRTDPKWITVNSTS-GDLQLKSGEYIAADGRFANLTFTLPTNPTDGDTIVIKDIGGKVGVNELLVNSsNQSIV 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  160 RLRDVQSSSYRLTHPYMTVAFIFNGNLWRVAEMLDNRDSQFVNATGAGsFQMQSGMTTFRNSGTGKITLQLPKYANDGDS 239
Cdd:PHA02584  162 RFRGNQSASVRITHPYSTNVFIFNGNLWQVYEAGYERRSVYVEPTGAG-FQAQSGDTVFRRTSGGTITLTLPKYANHGDM 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  240 ITTYDLDKLSSVNVATLQVYPGSGHTITYdsiNGVTSVASQRSGYGVFIFDQTNNRWVVYDGDNRVRLRRISYDLNMLPN 319
Cdd:PHA02584  241 ITTVDLDGLNSVNHTTVEVYPGSGHSIGE---NGVHSIESRTSGDGFFIFDSTEKLWRVWDGDQKVRLRVIRDDTNLLPN 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  320 DYVFVTPIagNPPTIRNVTLTLPQDVAEGDRVYISMYMMGKTQNcTIKVKDGSGETIRTNKNMMQFPQRKDYPPDD-WFS 398
Cdd:PHA02584  318 EYVAVFGA--NNGTTQTVTLTLPTDVADGDRVKISMNYMRKGQN-TVKIKAASGDKIASSKNLLQFPKRSEYPPTDeWVL 394
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  399 VTTLSFNADTDYLPYMELSYLK----ATKEWVVAQYRPLVERVDPTNRSRLGVIALATQAEVNKNLEDLPSDELAVTPRT 474
Cdd:PHA02584  395 VSELSFNANTDYVPYLELSYIEddstGRKYWVVAQNVPIVERVDSTDRARLGVIALATQAEANKNHEQNPSKELAITPET 474
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  475 LANKTATETRRGIARLATTAEVNQNTTATFLDDIIVTPKKLNERTATEDRRGILEIATQAETNAGTDDTTAITPKKLDTR 554
Cdd:PHA02584  475 LANKTATETRRGIARIATTAEVNQNTTFTFLDDVIITPKKLNERTATETRRGVAEIATQAETNAGTDDTTIITPKKLHAR 554
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  555 RATETLAGIGKLVTTGATTAeGALRGDAGTNVYNFNNGVDLITPKSLNEKTATEKSKGLVVLATENEVITGAAAgSASMP 634
Cdd:PHA02584  555 QASETLTGIVKLVSTAGTAP-AAARGTAGTGVYNKNDHNRVVTPKALDEYKATETQQGVVYLATQAEVIAGTSA-SGNAP 632
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  635 IVVTPEMLHRKTSTEARIGLIEIATQTETNTGTDDTRAVTPKKLNDRKATETLDGIIALATTAEVAAGTVTNKAVVPVKL 714
Cdd:PHA02584  633 LLVTPETLHARTATDTRIGLIEIATQAETNAGTDDTRAVTPKTLNDRTATETLTGIAEIATQVEFDAGTDDTRISTPLKI 712
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  715 KEFFDVAGHIAVATADGLTQSGTIWTTVNLGIAAATETQRGTLRVATQAETNAGTLDTVIITAKKLQAKKATDTAEGIIR 794
Cdd:PHA02584  713 KTRFDNTARTSVDAASGLTESGTIWNGYTLDILLATETQRGTLRVATQTEANAGTDDDTIITPKKLQGKKATETLEGIIR 792
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  795 CATNSEAAAGTSTNLAITPATMQYLNGNDPAWGATTTRRGAVFITTKSNTFIGDNLVGSTQPVDSYLEDFYAVSPRGLNF 874
Cdd:PHA02584  793 VATQAETVTGTSANLAVSPKNLKYIVQTEPTWRATEARRGFVKLATGSNTFVGNDTVGSTQPLTNYEKDGYAVSPYGLNY 872
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  875 ALQNFLPKMATAQNSLSLGGVVAASWMRRDADQTVTGNNKYNGTSTFVGNVVTNGTLTANAAVTVNATVTTNNNINQSAK 954
Cdd:PHA02584  873 ALQNYLPLKATAQNSLKLDGLDSAQFIRRDIDQTVNGSLTFTKNTNLSAPLVSSSTATFGGSVTANSTLTTQNTSNGTVV 952
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  955 antvyantvlgtaaagtknllrTFRGGTTDTTWHETVQGSVYRMATGATDLVDVLTVGDVGNGVLAYYGNTLRLNSKALA 1034
Cdd:PHA02584  953 ----------------------VVDETSIAFYSQNNTTGNIVFNIDGTVDPINVNANGTLNATGVATNGRAVYAEGGGIA 1010
                        1050      1060      1070      1080      1090      1100      1110      1120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279 1035 NINA-----NGDVTIASDASPTVQLRTAATNGWNGVtisndKGTTTATVINTRNFTQHLDSTYVNVTGDTMTGALSVN-- 1107
Cdd:PHA02584 1011 RTNNaaraiTGGFTIRNDGSTTVFLLTAAGDQTGGF-----NGLKSLIINNANGQVTINDNYIINAGGTIMSGGLTVNsr 1085
                        1130      1140      1150      1160      1170      1180      1190      1200
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279 1108 -------------VSGTGGRFTSVSGTAHIQAGDFSGPIQkMRLTGINDQVLTEFNI-------------NITDYTKAMI 1161
Cdd:PHA02584 1086 irsqgtkasytraPTADTVGFWSVDINDSATYNQFPGYFQ-MVTKTKSPGTLTQFGNtldslyqdwspdgRTTRYTRTWQ 1164
                        1210      1220      1230      1240      1250      1260
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 415434279 1162 NGN-------LIYHAGRKPTPAEIGAVAVAGSTVDTLVVRNYIKIGNVKIYANPVTKTCEFEWEE 1219
Cdd:PHA02584 1165 KNKnawtsfgEVYTKGNKPTAEDIGAVPADGGTMGNLTIRDWIKIGNVRIIPNPVTKTVKFEWEE 1229
 
Name Accession Description Interval E-value
34 PHA02584
long tail fiber, proximal subunit; Provisional
1-1219 0e+00

long tail fiber, proximal subunit; Provisional


Pssm-ID: 222890 [Multi-domain]  Cd Length: 1229  Bit Score: 1672.21  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279    1 MVAKSFRATSGLDAAGEKVINVGKASRSVLSDGVNVDFFNEFNTVQQYDPARGYSAFMAIIYARHIWYARADIASPAGAF 80
Cdd:PHA02584    3 DIKQAFRATSGLDAAGEKVINVAKADKNVLTDGVNVDFFIDENTIQQYDPTRGYDKDFAVIYNNRIYYAKADITAPAGAF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279   81 DETKWISTRNDPKWVYNNVTSvDGLPVESGTYLMADGRFSELTYILPDAPVEGDIITIKDGGGMVGINSMLVRS-NTRQI 159
Cdd:PHA02584   83 DPTKWKATRTDPKWITVNSTS-GDLQLKSGEYIAADGRFANLTFTLPTNPTDGDTIVIKDIGGKVGVNELLVNSsNQSIV 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  160 RLRDVQSSSYRLTHPYMTVAFIFNGNLWRVAEMLDNRDSQFVNATGAGsFQMQSGMTTFRNSGTGKITLQLPKYANDGDS 239
Cdd:PHA02584  162 RFRGNQSASVRITHPYSTNVFIFNGNLWQVYEAGYERRSVYVEPTGAG-FQAQSGDTVFRRTSGGTITLTLPKYANHGDM 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  240 ITTYDLDKLSSVNVATLQVYPGSGHTITYdsiNGVTSVASQRSGYGVFIFDQTNNRWVVYDGDNRVRLRRISYDLNMLPN 319
Cdd:PHA02584  241 ITTVDLDGLNSVNHTTVEVYPGSGHSIGE---NGVHSIESRTSGDGFFIFDSTEKLWRVWDGDQKVRLRVIRDDTNLLPN 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  320 DYVFVTPIagNPPTIRNVTLTLPQDVAEGDRVYISMYMMGKTQNcTIKVKDGSGETIRTNKNMMQFPQRKDYPPDD-WFS 398
Cdd:PHA02584  318 EYVAVFGA--NNGTTQTVTLTLPTDVADGDRVKISMNYMRKGQN-TVKIKAASGDKIASSKNLLQFPKRSEYPPTDeWVL 394
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  399 VTTLSFNADTDYLPYMELSYLK----ATKEWVVAQYRPLVERVDPTNRSRLGVIALATQAEVNKNLEDLPSDELAVTPRT 474
Cdd:PHA02584  395 VSELSFNANTDYVPYLELSYIEddstGRKYWVVAQNVPIVERVDSTDRARLGVIALATQAEANKNHEQNPSKELAITPET 474
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  475 LANKTATETRRGIARLATTAEVNQNTTATFLDDIIVTPKKLNERTATEDRRGILEIATQAETNAGTDDTTAITPKKLDTR 554
Cdd:PHA02584  475 LANKTATETRRGIARIATTAEVNQNTTFTFLDDVIITPKKLNERTATETRRGVAEIATQAETNAGTDDTTIITPKKLHAR 554
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  555 RATETLAGIGKLVTTGATTAeGALRGDAGTNVYNFNNGVDLITPKSLNEKTATEKSKGLVVLATENEVITGAAAgSASMP 634
Cdd:PHA02584  555 QASETLTGIVKLVSTAGTAP-AAARGTAGTGVYNKNDHNRVVTPKALDEYKATETQQGVVYLATQAEVIAGTSA-SGNAP 632
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  635 IVVTPEMLHRKTSTEARIGLIEIATQTETNTGTDDTRAVTPKKLNDRKATETLDGIIALATTAEVAAGTVTNKAVVPVKL 714
Cdd:PHA02584  633 LLVTPETLHARTATDTRIGLIEIATQAETNAGTDDTRAVTPKTLNDRTATETLTGIAEIATQVEFDAGTDDTRISTPLKI 712
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  715 KEFFDVAGHIAVATADGLTQSGTIWTTVNLGIAAATETQRGTLRVATQAETNAGTLDTVIITAKKLQAKKATDTAEGIIR 794
Cdd:PHA02584  713 KTRFDNTARTSVDAASGLTESGTIWNGYTLDILLATETQRGTLRVATQTEANAGTDDDTIITPKKLQGKKATETLEGIIR 792
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  795 CATNSEAAAGTSTNLAITPATMQYLNGNDPAWGATTTRRGAVFITTKSNTFIGDNLVGSTQPVDSYLEDFYAVSPRGLNF 874
Cdd:PHA02584  793 VATQAETVTGTSANLAVSPKNLKYIVQTEPTWRATEARRGFVKLATGSNTFVGNDTVGSTQPLTNYEKDGYAVSPYGLNY 872
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  875 ALQNFLPKMATAQNSLSLGGVVAASWMRRDADQTVTGNNKYNGTSTFVGNVVTNGTLTANAAVTVNATVTTNNNINQSAK 954
Cdd:PHA02584  873 ALQNYLPLKATAQNSLKLDGLDSAQFIRRDIDQTVNGSLTFTKNTNLSAPLVSSSTATFGGSVTANSTLTTQNTSNGTVV 952
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  955 antvyantvlgtaaagtknllrTFRGGTTDTTWHETVQGSVYRMATGATDLVDVLTVGDVGNGVLAYYGNTLRLNSKALA 1034
Cdd:PHA02584  953 ----------------------VVDETSIAFYSQNNTTGNIVFNIDGTVDPINVNANGTLNATGVATNGRAVYAEGGGIA 1010
                        1050      1060      1070      1080      1090      1100      1110      1120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279 1035 NINA-----NGDVTIASDASPTVQLRTAATNGWNGVtisndKGTTTATVINTRNFTQHLDSTYVNVTGDTMTGALSVN-- 1107
Cdd:PHA02584 1011 RTNNaaraiTGGFTIRNDGSTTVFLLTAAGDQTGGF-----NGLKSLIINNANGQVTINDNYIINAGGTIMSGGLTVNsr 1085
                        1130      1140      1150      1160      1170      1180      1190      1200
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279 1108 -------------VSGTGGRFTSVSGTAHIQAGDFSGPIQkMRLTGINDQVLTEFNI-------------NITDYTKAMI 1161
Cdd:PHA02584 1086 irsqgtkasytraPTADTVGFWSVDINDSATYNQFPGYFQ-MVTKTKSPGTLTQFGNtldslyqdwspdgRTTRYTRTWQ 1164
                        1210      1220      1230      1240      1250      1260
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 415434279 1162 NGN-------LIYHAGRKPTPAEIGAVAVAGSTVDTLVVRNYIKIGNVKIYANPVTKTCEFEWEE 1219
Cdd:PHA02584 1165 KNKnawtsfgEVYTKGNKPTAEDIGAVPADGGTMGNLTIRDWIKIGNVRIIPNPVTKTVKFEWEE 1229
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
724-1129 6.74e-08

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 56.88  E-value: 6.74e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  724 IAVATADGLTQSGTIWTTVNLGIAAATETQRGTLRVATQAETNAGTLDTVIITAKKLQAKKATDTAEGIIRCATNSEAAA 803
Cdd:COG3468    35 IGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGG 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  804 GTSTNLAITPATMQYLNGNDPAWGATTTRRGAVFITTKSNTFIGDNLVGSTqpVDSYLEDFYAVSPRGLNFALQNFLPKM 883
Cdd:COG3468   115 GGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGG--GGSGGGGGAGGGGGGGAGGSGGAGSTG 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  884 ATAQNSLSLGGVVAASWMRRDADQTVTGNNKYNGTSTFVGNVVTNGTLTANAAVTVNATVTTNNNINQSAKANTVYANTV 963
Cdd:COG3468   193 SGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGS 272
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  964 LGTAAAGTKNLLRTFRGGTTDTTwhETVQGSVYRMATGATDLVDVLTVGDVGNGVLAYYGNTLRLNSKALANINANGDVT 1043
Cdd:COG3468   273 GGGGGGGANGGGSGGGGGASGTG--GGGTASTGGGGGGGGGNGGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAG 350
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279 1044 IASDASPTVQLRTAATNGWNGVTISNDKGTTTATVINTRNFTQHLDSTYVNVTGDTMTGALSVNVSGTGGRFTSVSGTAH 1123
Cdd:COG3468   351 GGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGNNGGGGVGGGGGGGLTLTGGTLTVNGNYT 430

                  ....*.
gi 415434279 1124 IQAGDF 1129
Cdd:COG3468   431 GNNGTL 436
 
Name Accession Description Interval E-value
34 PHA02584
long tail fiber, proximal subunit; Provisional
1-1219 0e+00

long tail fiber, proximal subunit; Provisional


Pssm-ID: 222890 [Multi-domain]  Cd Length: 1229  Bit Score: 1672.21  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279    1 MVAKSFRATSGLDAAGEKVINVGKASRSVLSDGVNVDFFNEFNTVQQYDPARGYSAFMAIIYARHIWYARADIASPAGAF 80
Cdd:PHA02584    3 DIKQAFRATSGLDAAGEKVINVAKADKNVLTDGVNVDFFIDENTIQQYDPTRGYDKDFAVIYNNRIYYAKADITAPAGAF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279   81 DETKWISTRNDPKWVYNNVTSvDGLPVESGTYLMADGRFSELTYILPDAPVEGDIITIKDGGGMVGINSMLVRS-NTRQI 159
Cdd:PHA02584   83 DPTKWKATRTDPKWITVNSTS-GDLQLKSGEYIAADGRFANLTFTLPTNPTDGDTIVIKDIGGKVGVNELLVNSsNQSIV 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  160 RLRDVQSSSYRLTHPYMTVAFIFNGNLWRVAEMLDNRDSQFVNATGAGsFQMQSGMTTFRNSGTGKITLQLPKYANDGDS 239
Cdd:PHA02584  162 RFRGNQSASVRITHPYSTNVFIFNGNLWQVYEAGYERRSVYVEPTGAG-FQAQSGDTVFRRTSGGTITLTLPKYANHGDM 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  240 ITTYDLDKLSSVNVATLQVYPGSGHTITYdsiNGVTSVASQRSGYGVFIFDQTNNRWVVYDGDNRVRLRRISYDLNMLPN 319
Cdd:PHA02584  241 ITTVDLDGLNSVNHTTVEVYPGSGHSIGE---NGVHSIESRTSGDGFFIFDSTEKLWRVWDGDQKVRLRVIRDDTNLLPN 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  320 DYVFVTPIagNPPTIRNVTLTLPQDVAEGDRVYISMYMMGKTQNcTIKVKDGSGETIRTNKNMMQFPQRKDYPPDD-WFS 398
Cdd:PHA02584  318 EYVAVFGA--NNGTTQTVTLTLPTDVADGDRVKISMNYMRKGQN-TVKIKAASGDKIASSKNLLQFPKRSEYPPTDeWVL 394
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  399 VTTLSFNADTDYLPYMELSYLK----ATKEWVVAQYRPLVERVDPTNRSRLGVIALATQAEVNKNLEDLPSDELAVTPRT 474
Cdd:PHA02584  395 VSELSFNANTDYVPYLELSYIEddstGRKYWVVAQNVPIVERVDSTDRARLGVIALATQAEANKNHEQNPSKELAITPET 474
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  475 LANKTATETRRGIARLATTAEVNQNTTATFLDDIIVTPKKLNERTATEDRRGILEIATQAETNAGTDDTTAITPKKLDTR 554
Cdd:PHA02584  475 LANKTATETRRGIARIATTAEVNQNTTFTFLDDVIITPKKLNERTATETRRGVAEIATQAETNAGTDDTTIITPKKLHAR 554
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  555 RATETLAGIGKLVTTGATTAeGALRGDAGTNVYNFNNGVDLITPKSLNEKTATEKSKGLVVLATENEVITGAAAgSASMP 634
Cdd:PHA02584  555 QASETLTGIVKLVSTAGTAP-AAARGTAGTGVYNKNDHNRVVTPKALDEYKATETQQGVVYLATQAEVIAGTSA-SGNAP 632
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  635 IVVTPEMLHRKTSTEARIGLIEIATQTETNTGTDDTRAVTPKKLNDRKATETLDGIIALATTAEVAAGTVTNKAVVPVKL 714
Cdd:PHA02584  633 LLVTPETLHARTATDTRIGLIEIATQAETNAGTDDTRAVTPKTLNDRTATETLTGIAEIATQVEFDAGTDDTRISTPLKI 712
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  715 KEFFDVAGHIAVATADGLTQSGTIWTTVNLGIAAATETQRGTLRVATQAETNAGTLDTVIITAKKLQAKKATDTAEGIIR 794
Cdd:PHA02584  713 KTRFDNTARTSVDAASGLTESGTIWNGYTLDILLATETQRGTLRVATQTEANAGTDDDTIITPKKLQGKKATETLEGIIR 792
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  795 CATNSEAAAGTSTNLAITPATMQYLNGNDPAWGATTTRRGAVFITTKSNTFIGDNLVGSTQPVDSYLEDFYAVSPRGLNF 874
Cdd:PHA02584  793 VATQAETVTGTSANLAVSPKNLKYIVQTEPTWRATEARRGFVKLATGSNTFVGNDTVGSTQPLTNYEKDGYAVSPYGLNY 872
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  875 ALQNFLPKMATAQNSLSLGGVVAASWMRRDADQTVTGNNKYNGTSTFVGNVVTNGTLTANAAVTVNATVTTNNNINQSAK 954
Cdd:PHA02584  873 ALQNYLPLKATAQNSLKLDGLDSAQFIRRDIDQTVNGSLTFTKNTNLSAPLVSSSTATFGGSVTANSTLTTQNTSNGTVV 952
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  955 antvyantvlgtaaagtknllrTFRGGTTDTTWHETVQGSVYRMATGATDLVDVLTVGDVGNGVLAYYGNTLRLNSKALA 1034
Cdd:PHA02584  953 ----------------------VVDETSIAFYSQNNTTGNIVFNIDGTVDPINVNANGTLNATGVATNGRAVYAEGGGIA 1010
                        1050      1060      1070      1080      1090      1100      1110      1120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279 1035 NINA-----NGDVTIASDASPTVQLRTAATNGWNGVtisndKGTTTATVINTRNFTQHLDSTYVNVTGDTMTGALSVN-- 1107
Cdd:PHA02584 1011 RTNNaaraiTGGFTIRNDGSTTVFLLTAAGDQTGGF-----NGLKSLIINNANGQVTINDNYIINAGGTIMSGGLTVNsr 1085
                        1130      1140      1150      1160      1170      1180      1190      1200
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279 1108 -------------VSGTGGRFTSVSGTAHIQAGDFSGPIQkMRLTGINDQVLTEFNI-------------NITDYTKAMI 1161
Cdd:PHA02584 1086 irsqgtkasytraPTADTVGFWSVDINDSATYNQFPGYFQ-MVTKTKSPGTLTQFGNtldslyqdwspdgRTTRYTRTWQ 1164
                        1210      1220      1230      1240      1250      1260
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 415434279 1162 NGN-------LIYHAGRKPTPAEIGAVAVAGSTVDTLVVRNYIKIGNVKIYANPVTKTCEFEWEE 1219
Cdd:PHA02584 1165 KNKnawtsfgEVYTKGNKPTAEDIGAVPADGGTMGNLTIRDWIKIGNVRIIPNPVTKTVKFEWEE 1229
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
724-1129 6.74e-08

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 56.88  E-value: 6.74e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  724 IAVATADGLTQSGTIWTTVNLGIAAATETQRGTLRVATQAETNAGTLDTVIITAKKLQAKKATDTAEGIIRCATNSEAAA 803
Cdd:COG3468    35 IGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGG 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  804 GTSTNLAITPATMQYLNGNDPAWGATTTRRGAVFITTKSNTFIGDNLVGSTqpVDSYLEDFYAVSPRGLNFALQNFLPKM 883
Cdd:COG3468   115 GGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGG--GGSGGGGGAGGGGGGGAGGSGGAGSTG 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  884 ATAQNSLSLGGVVAASWMRRDADQTVTGNNKYNGTSTFVGNVVTNGTLTANAAVTVNATVTTNNNINQSAKANTVYANTV 963
Cdd:COG3468   193 SGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGS 272
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  964 LGTAAAGTKNLLRTFRGGTTDTTwhETVQGSVYRMATGATDLVDVLTVGDVGNGVLAYYGNTLRLNSKALANINANGDVT 1043
Cdd:COG3468   273 GGGGGGGANGGGSGGGGGASGTG--GGGTASTGGGGGGGGGNGGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAG 350
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279 1044 IASDASPTVQLRTAATNGWNGVTISNDKGTTTATVINTRNFTQHLDSTYVNVTGDTMTGALSVNVSGTGGRFTSVSGTAH 1123
Cdd:COG3468   351 GGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGNNGGGGVGGGGGGGLTLTGGTLTVNGNYT 430

                  ....*.
gi 415434279 1124 IQAGDF 1129
Cdd:COG3468   431 GNNGTL 436
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
683-1157 4.48e-05

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 47.85  E-value: 4.48e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  683 ATETLDGIIALATTAEVAAGTVTNKAVVPVKLKEFFDVAGHIAVATADGLTQSGTIWTTVNLGIAAATETQRGTLRVATQ 762
Cdd:COG4625    32 AGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGGGGGGGGGG 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  763 AETNAGTLDTVIITAKKLQAKKATDTAEGIIRCATNSEAAAGTSTNLAITPATMQYLNGNDPAWGATTTRRGAVFITTKS 842
Cdd:COG4625   112 GGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  843 NTFIGDNLVGSTQPVDSYLEDFYAVSPRGLNFAlqnflpkMATAQNSLSLGGVVAASWMRRDADQTVTGNNKYNGTSTFV 922
Cdd:COG4625   192 GNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGGA 264
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  923 GNVVTNGTLTANAAVTVNATVTTNNNINQSAKANTVYANTVLGTAAAGTKNLLRTFRGGTTDTTWHETVQGSVYRMATGA 1002
Cdd:COG4625   265 GGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGAG 344
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279 1003 TDLVDVLTVGDVGNGVLAYYGNTLRLNSKALANINANGDVTIASDASPTVQLRTAATNGWNGVTISNDKGTTTATVINTR 1082
Cdd:COG4625   345 AGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGGG 424
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 415434279 1083 NFTqhLDSTYVNVTGDTMTGALSVNVSGTGGRFTSVSGTAHIQAGDFSGPIQKMRLTGINDQVLTEFNINITDYT 1157
Cdd:COG4625   425 GGT--GAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTTVNGGGNYT 497
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
663-1128 1.22e-04

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 46.31  E-value: 1.22e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  663 TNTGTDDTRAVTPKKLNDRKATETLDGIIALATTAEVAAGTVTNKAVVPVKLKEFFDVAGHIAVATADGLTQSGTIWTTV 742
Cdd:COG4625    79 GGGGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAG 158
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  743 NLGIAAATETQRGTLRVATQAETNAGTLDTVIITAKKLQAKKATDTAEGIIRCATNSEAAAGTSTNLAITPATMQYLNGN 822
Cdd:COG4625   159 GAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGG 238
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  823 DPAWGATTTRRGAVFITTKSNTFIGDNLVGSTQPVDSYLEDFYAVSPRGLNFALQNFLPKMATAQNSLSLGGVVAASWMR 902
Cdd:COG4625   239 GGGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 318
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  903 RDADQTVTGNNKYNGTSTFVGNVVTNGTLTANAAVTVNATVTTNNNINQSAKANTVYANTVLGTAAAGTKNLLRTFRGGT 982
Cdd:COG4625   319 GGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGG 398
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  983 TDTTWHETVQGSVYRMATGATDLVDVLTVGDVGNGVLAYYGNTLRLNSKALANINANGDVTIASDASPTVQLRTAATNGW 1062
Cdd:COG4625   399 GGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTL 478
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 415434279 1063 NGvtisNDKGTTTATVINTRNFTQHLDSTYVNVTGDTMTGALSVNVSGTGGRFTSVSGTAHIQAGD 1128
Cdd:COG4625   479 TG----NNTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGTATLNGGTVVVLAGGYAPGT 540
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
531-1121 1.43e-04

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 46.30  E-value: 1.43e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  531 ATQAETNAGTDDTTAITPKKLDTRRATETLAGIGKLVTTGATTAEGALRGDAGTNVYNFNNGVDLITPKSLNEKTATEKS 610
Cdd:COG3210   125 TGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGNNTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGALINA 204
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  611 KGLVVLATENEVITGAAAGSASMPIVVTPEMLHRKTSTEARIGLIEIATQTETNTGTDDTRAVTPKKLNDRKATETLDGI 690
Cdd:COG3210   205 TAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATG 284
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  691 IALATTAEVAAGTVTNKAVVPVKLKeffDVAGHIAVATADGLTQSGTIWTTVNLGIAAATETQRGTLRVATQAETNAGTL 770
Cdd:COG3210   285 SNTAGASSGDTTTNGTSSVTGAGGT---GVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGS 361
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  771 DTVIITAKKLQAKKATDTAEGIIRCATNSEAAAGTSTNLAITPATMQYLNGNDPAWGATTTRRGAVFITTKSNTFIGDNL 850
Cdd:COG3210   362 GLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTV 441
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  851 VGSTQPVDSYLEDFYAVSPRGLNFALQNFLPKMATAQNSLSLGGVVAASWMRRDADQTVTGNNKYNGTSTFVGNVVTNGT 930
Cdd:COG3210   442 TGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGG 521
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  931 LTANAAVTVNATVTTNNNINQSAKANTVYANTVLGTAAAGTKNLLRTFRGGTTDTTWHETVQGSVYRMATGATDLVDVLT 1010
Cdd:COG3210   522 GGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVL 601
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279 1011 VGDVGNGVLAYYGNTLRLNSKALANINANGDVTIASDASPTVQLRTAATNGWNGVTISNDKGTTTATVINTRNFTQHLDS 1090
Cdd:COG3210   602 SIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSG 681
                         570       580       590
                  ....*....|....*....|....*....|.
gi 415434279 1091 TYVNVTGDTMTGALSVNVSGTGGRFTSVSGT 1121
Cdd:COG3210   682 ATGGTTGTTLNAATGGTLNNAGNTLTISTGS 712
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
536-1202 7.43e-04

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 43.99  E-value: 7.43e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  536 TNAGTDDTTAITPKKLDTRRATETLAGIGKLVTTGATTAEGALRGDAGTNVYNFNNGVDLITPKSLNEKTATEKSKGLVV 615
Cdd:COG3210   247 DISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTV 326
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  616 LATENEVITGAAAGSASMPIVVTPEMLHRKTSTEARIGLIEIATQTETNTGTDDTRAVTPKKLNDRKATETLDGIIALAT 695
Cdd:COG3210   327 GGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLA 406
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  696 TAEVAAGTVTNKAVVPVKLKEFFDVAGHIAVATADGLTQSGTIWTTVNLGIAAATETQRGTLRVATQAETNAGTLDTVII 775
Cdd:COG3210   407 TGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLA 486
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  776 TAKKLQAKKATDTAEGIIRCATNSEAAAGTSTNLAITPATMQYLNGNDPAWGATTTRRGAVFITTKSNTFIGDNLVGSTQ 855
Cdd:COG3210   487 GGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANT 566
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  856 PVDSYLEDFYAVSPRGLNFALQNFLPKMATAQNSLSLGGVVAASWMRRDADQTVTGNNKYNGTSTFVGNVVTNGTLTANA 935
Cdd:COG3210   567 LGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGT 646
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279  936 AVTVNATVTTNNNINQSAKANTVYANTVLGTAAAGTKNLLRTfrgGTTDTTWHETVQGSVYRMATGATDLVDVLTVGDVG 1015
Cdd:COG3210   647 GSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTG---TTLNAATGGTLNNAGNTLTISTGSITVTGQIGALA 723
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279 1016 NGVlayyGNTLRL-NSKALANINANGDVTIASDASPTVQLRTAATNGWNGVTISNDKGTTTATVINTRNFTQHLDSTYVN 1094
Cdd:COG3210   724 NAN----GDTVTFgNLGTGATLTLNAGVTITSGNAGTLSIGLTANTTASGTTLTLANANGNTSAGATLDNAGAEISIDIT 799
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 415434279 1095 VTGD-TMTGALSVNVSGTGGRFTSVSGTAHIQAGDFSGPIQKMRLTGINDQVLTEFNINITDYTKAMINGNLIYHAGRKP 1173
Cdd:COG3210   800 ADGTiTAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITV 879
                         650       660
                  ....*....|....*....|....*....
gi 415434279 1174 TPAEIGAVAVAGSTVDTLVVRNYIKIGNV 1202
Cdd:COG3210   880 GSGGVATSTGTANAGTLTNLGTTTNAASG 908
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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