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Conserved domains on  [gi|41351281|gb|AAH65542|]
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Oral cancer overexpressed 1 [Homo sapiens]

Protein Classification

Yae1 family protein( domain architecture ID 10561203)

Yae1 family protein similar to essential proteins Yae1 and Lto1, which act as binding partners of the cytosolic Fe-S protein assembly (CIA) targeting complex

Gene Ontology:  GO:0062092|GO:0106035

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Yae1_N pfam09811
Essential protein Yae1, N terminal; Members of this family are found in the N terminal region ...
 22-60 1.38e-09

Essential protein Yae1, N terminal; Members of this family are found in the N terminal region of the essential protein Yae1. Their exact function has not, as yet, been determined. The family DUF1715, pfam08215 has now been merged into this family.


:

Pssm-ID: 430844 [Multi-domain]  Cd Length: 39  Bit Score: 50.11  E-value: 1.38e-09
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 41351281    22 GYREGYEEGSSLGVMEGRQHGTLHGAKIGSEIGCYQGFA 60
Cdd:pfam09811   1 GYREGISEGKEEGLQEGFDEGFQEGAQLGLEIGYLLGKL 39
 
Name Accession Description Interval E-value
Yae1_N pfam09811
Essential protein Yae1, N terminal; Members of this family are found in the N terminal region ...
 22-60 1.38e-09

Essential protein Yae1, N terminal; Members of this family are found in the N terminal region of the essential protein Yae1. Their exact function has not, as yet, been determined. The family DUF1715, pfam08215 has now been merged into this family.


Pssm-ID: 430844 [Multi-domain]  Cd Length: 39  Bit Score: 50.11  E-value: 1.38e-09
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 41351281    22 GYREGYEEGSSLGVMEGRQHGTLHGAKIGSEIGCYQGFA 60
Cdd:pfam09811   1 GYREGISEGKEEGLQEGFDEGFQEGAQLGLEIGYLLGKL 39
 
Name Accession Description Interval E-value
Yae1_N pfam09811
Essential protein Yae1, N terminal; Members of this family are found in the N terminal region ...
 22-60 1.38e-09

Essential protein Yae1, N terminal; Members of this family are found in the N terminal region of the essential protein Yae1. Their exact function has not, as yet, been determined. The family DUF1715, pfam08215 has now been merged into this family.


Pssm-ID: 430844 [Multi-domain]  Cd Length: 39  Bit Score: 50.11  E-value: 1.38e-09
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 41351281    22 GYREGYEEGSSLGVMEGRQHGTLHGAKIGSEIGCYQGFA 60
Cdd:pfam09811   1 GYREGISEGKEEGLQEGFDEGFQEGAQLGLEIGYLLGKL 39
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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