|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-576 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 546.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 1 MMMFKPvnfTLLMSNLLWTAFVLSLFPLFWCFMSSQMVLLSWEVITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFS 80
Cdd:MTH00207 1 LRMFKP---SSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 81 VNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQNPSSLAAGMVTALANRVGDVMLILS 160
Cdd:MTH00207 78 KTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 161 IAWMVNQGHWNLILMFENPYSGLLTGSILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLE 240
Cdd:MTH00207 158 IGWTLNQGHWSITNMWQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLS 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 241 KTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFICAGNVIH 320
Cdd:MTH00207 238 STYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIH 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 321 QHGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILSTLFTLMYSIRFSF 400
Cdd:MTH00207 318 SHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTL 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 401 FIIWGEQKKCALFSIGDEDKNVRLAQLALSTGAVFGGALFSWLLFPFPVMIILTPLQKSLILFSLTL-TFFAMFMmekMS 479
Cdd:MTH00207 398 AVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLgALLAWLF---TT 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 480 YFKSMLSLSPLNSFIIHSLSTMWFLSLMFSKISSKASMNLALMMTKASDQGWSEMFGGQGSFLLSKSILSQVKEAQAQTV 559
Cdd:MTH00207 475 PNITKTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIP 554
|
570
....*....|....*..
gi 408772116 560 SMFILFSFIMVILLILM 576
Cdd:MTH00207 555 NNYLMMSFVLLTIIIIM 571
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
11-576 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 529.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 11 LLMSNLLWTAFVLSLFPLFWCFMSSQMVLLSWEVITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFS 90
Cdd:MTH00151 5 SLSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 91 VRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQNPSSLAAGMVTALANRVGDVMLILSIAWMVNQGHW 170
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 171 NLILMFENPYSGLLTGSILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEKTYWFNSVCL 250
Cdd:MTH00151 165 SILSMWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 251 GMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFICAGNVIHQHGGSQDVRF 330
Cdd:MTH00151 245 FISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRL 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 331 MGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILSTLFTLMYSIRFSFFIIWGEQKKC 410
Cdd:MTH00151 325 LGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSS 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 411 ALFSIGDEDKNVRLAQLALSTGAVFGGALFSWLLFPFPVMIILTPLQKSLILFSLTLTFFAMFMMEKMSYFKSMLSLspL 490
Cdd:MTH00151 405 SLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVK--L 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 491 NSFiihsLSTMWFLSLMFSKISSKASMNLALMMTKASDQGWSEMFGGQGSFLLSKSILSQVKEAQAQTVSMFILFSFIMV 570
Cdd:MTH00151 483 SFF----FSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLV 558
|
....*.
gi 408772116 571 ILLILM 576
Cdd:MTH00151 559 LFLVVI 564
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-578 |
2.94e-170 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 495.05 E-value: 2.94e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 1 MMMFKPVNFTLLMSnllwtaFVLSLFPLFWCFMSSQMVLLSWEVITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFS 80
Cdd:MTH00165 1 MSMCLISFFFLFFL------SLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYS 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 81 VNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQNPSSLAAGMVTALANRVGDVMLILS 160
Cdd:MTH00165 75 KSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 161 IAWMVNQGHWNLI----LMFENPYSGLLTGSILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFY 236
Cdd:MTH00165 155 IAWMMNFGSWNFIfyldFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 237 PFLEkTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFICAG 316
Cdd:MTH00165 235 NLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 317 NVIHQHGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILSTLFTLMYSI 396
Cdd:MTH00165 314 SIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSF 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 397 RFSFFIIWGEQKKCALFSIGDEDKNVRLAQLALSTGAVFGGALFSWLLFPFPVMIILTPLQKSLILFSLTLTFFAMFMME 476
Cdd:MTH00165 394 RLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELS 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 477 KMSYFKSMLSLSplNSFIIHSLSTMWFLSLMFSKISSKASMNLALMMTKASDQGWSEMFGGQGSFLLSKSILSQVKEAQA 556
Cdd:MTH00165 474 LMSLSYNLKSLK--NYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQN 551
|
570 580
....*....|....*....|..
gi 408772116 557 QTVSMFILFSFIMVILLILMVF 578
Cdd:MTH00165 552 NNLKIYLLSFLLWMIILLLLFL 573
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
9-575 |
5.35e-156 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 458.34 E-value: 5.35e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 9 FTLLMSNLLWTAFVLSLFPLFWCFMSSQMVLLSWEVITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDP 88
Cdd:MTH00209 1 FKKMQMFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 89 FSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQNPSSLAAGMVTALANRVGDVMLILSIAWMVNQG 168
Cdd:MTH00209 81 FKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 169 HWNLILMFENPYSGLLTG-SILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEKTYWFNS 247
Cdd:MTH00209 161 NWNIFYLNFNSNLGSVISvLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 248 VCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFICAGNVIHQHGGSQD 327
Cdd:MTH00209 241 SLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 328 VRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILSTLFTLMYSIRFSFFIIWGEQ 407
Cdd:MTH00209 321 IRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPN 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 408 KKCALFSIGDEDKNVRLAQLALSTGAVFGGALFSWLLFPFPVMIILTPLQKSLILFSLTLTFFAMFMMEKMSYFKsmLSL 487
Cdd:MTH00209 401 SSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFL--IKG 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 488 SPLNSFiihsLSTMWFLSLMFSKISSKASMNLALMMTKASDQGWSEMFGGQGSFLLSKSILSQVKEAQAQTVSMFILFSF 567
Cdd:MTH00209 479 YKVNYF----LSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMM 554
|
....*...
gi 408772116 568 IMVILLIL 575
Cdd:MTH00209 555 LILLGVIL 562
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
2-577 |
3.55e-117 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 360.04 E-value: 3.55e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 2 MMFKPVNFTLLMSNLLWTAFVLSLFPLF-WCFMSSQMVLLSWEVITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFS 80
Cdd:MTH00211 20 LLLPLNNSKLHIKKAVKLSFFISLIPLLiFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFS 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 81 VNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQNPSSLAAGMVTALA-NRVGDVMLIL 159
Cdd:MTH00211 100 LWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIyNRIGDIGLLL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 160 SIAWM-VNQGHWNLILMFENP-YSGLLTGSILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYP 237
Cdd:MTH00211 180 SMVWLlLNLNSWEISQLFILNlDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSP 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 238 FLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFICAGN 317
Cdd:MTH00211 260 LFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGS 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 318 VIHQHGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILSTLFTLMYSIR 397
Cdd:MTH00211 340 IIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFR 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 398 FSFFIIWGEQKKCALFSIGDEDKNVRLAQLALSTGAVFGGALFSWLLFPFPVMIILTPLQKSLILFSLTLT--FFAMFMM 475
Cdd:MTH00211 420 LIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILSLPFLLKLMPLLVTIVglLLGLELV 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 476 EKMSYFKSMLSLSPLNSFiihslstmWFLSLMFSKISSKASMNLA-LMMTKASDQGWSEMFGGQGSFLLSKSILSQVKEA 554
Cdd:MTH00211 500 NLTHKQLKTSTLSFSNML--------GYYPPIIHRLLPKLSLKWGqTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSP 571
|
570 580
....*....|....*....|...
gi 408772116 555 QAQTVSMFILFSFIMVILLILMV 577
Cdd:MTH00211 572 QQGLIKSYLALLLLSLLLILLLF 594
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
8-578 |
1.90e-116 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 358.90 E-value: 1.90e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 8 NFTLLMSNLLWTAFVLSLFPLF-WCFMSSQMVLLS---WEVITLGSSKLEFNLlvDLYGTVFSSTVLLISASVVTFSVNY 83
Cdd:MTH00208 53 NNSNFSISLLKTLAFLSLINLLiWILLGCPNINISlsnWLSNTLFNFSLSFIF--DFYFILFFSVALFVTWSIIEFSHYY 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 84 MSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQ-----NPSSLAAgmvtALANRVGDVMLI 158
Cdd:MTH00208 131 MSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTtrndaNSSALQA----VIYNRIGDIGII 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 159 LSIAW-MVNQGHWNL--ILMFENPYSGLLTG---SILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLL 232
Cdd:MTH00208 207 LFLSLsLINFNSWNLneILSLNNSNSFLINIllfGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 233 TRFYPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLF 312
Cdd:MTH00208 287 IRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLF 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 313 ICAGNVIHQHGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILSTLFTL 392
Cdd:MTH00208 367 LCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTA 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 393 MYSIRFSFFIIWGEQKKCALFSIGDEDKNVRLAQLALSTGAVFGGALFSWLLFPFPvMIILTPLQKSLILFsltLTFFAM 472
Cdd:MTH00208 447 VYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLI---VTIIGA 522
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 473 FMMEKMSYFksmLSLSPLNSFIIHSLSTMWFLSLMFSKISSKASMNLALMM-TKASDQGWSEMFGGQGSFLLSKSILSQV 551
Cdd:MTH00208 523 AFSFSFLLS---LSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFTSLFGsTRTLDRGWSENIGPQGIGNTSSTLSKSY 599
|
570 580
....*....|....*....|....*..
gi 408772116 552 KEAQAQTVSMFILFSFIMVILLILMVF 578
Cdd:MTH00208 600 QLTQTGYIKQYLLSSTLLFLLILTLSL 626
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-576 |
1.30e-104 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 327.51 E-value: 1.30e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 1 MMMFKPVNFTLLMSNLLWTAFVLSLFPLFwCFMSSQMVLLS--WEVITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVT 78
Cdd:MTH00004 24 LLSKNLKNSPTTIKTTVKLAFLISLIPLT-LFLNSGTESITtnWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILE 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 79 FSVNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQ-----NPSSLAAgmvtALANRVG 153
Cdd:MTH00004 103 FSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSgraeaNTAALQA----IIYNRIG 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 154 DVMLILSIAWMV-NQGHWNLILMF-ENPYSGLLTGSILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFL 231
Cdd:MTH00004 179 DIGLILSMAWLAmTLNTWEIQQLFsPTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 232 LTRFYPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALL 311
Cdd:MTH00004 259 LIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAML 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 312 FICAGNVIHQHGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILSTLFT 391
Cdd:MTH00004 339 FLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFT 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 392 LMYSIRFSFFIIWGEQKKCALFSIGDEDKNVRLAQLALSTGAVFGGALFSWLLFPF-------PVMIILTPLqkSLILFS 464
Cdd:MTH00004 419 AAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTktppmtmPTTTKLAAL--IVTILG 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 465 LTLTFFAMFMMEKMSYFKSMLSLSPLNS-----FIIHSLSTMWFLslmfsKISSKASMNLAlmmtkasDQGWSEMFGGQG 539
Cdd:MTH00004 497 ILLALELSNMTTTLTPPKQNTLHNFSNQlaffnPLTHRLLPMTLL-----KSSQKIATHLI-------DLSWLEKMGPKG 564
|
570 580 590
....*....|....*....|....*....|....*....
gi 408772116 540 sflLSKSILSQVKEAQAQTVSM--FILFSFIMVILLILM 576
Cdd:MTH00004 565 ---LANLQLTASKTLTTLQKGLikNYLTSFALTILLLLL 600
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-574 |
8.66e-99 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 312.23 E-value: 8.66e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 1 MMMFKPVNFTLLMSNLLWTAFVLSLFPLFwCFMS--SQMVLLSWEVITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVT 78
Cdd:MTH00066 22 LLLPKSNNFHTNVKTSVKTAFFISLIPLM-IFINqgLESITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 79 FSVNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLV-IYYQNPSSLAAGMVTALANRVGDVML 157
Cdd:MTH00066 101 FAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGL 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 158 ILSIAW-MVNQGHWNL--ILMFENPYSGLLTGSILlASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTR 234
Cdd:MTH00066 181 ILSMAWlAMNTNSWELqqIFLLNDNSTLPLLGLIL-AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIR 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 235 FYPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFIC 314
Cdd:MTH00066 260 FHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLC 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 315 AGNVIHQHGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILSTLFTLMY 394
Cdd:MTH00066 340 SGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVY 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 395 SIRFSFFIIWGEQKKCALFSIGDEDKNVRLAQLALSTGAVFGGALFSWLLFPF--PVMIILTPLQKSLILFSLTLTFFAM 472
Cdd:MTH00066 420 SFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMkpQILTMPTFMKLAALLVTLLGLLIAL 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 473 FMMeKMSYFKSMLSLSplnsfiiHSLSTMW-FLSLMFSKISSKASMNLAL-MMTKASDQGWSEMFGGQG---SFLLSKSI 547
Cdd:MTH00066 500 DLA-KITSKTTPKTKM-------HSFSNLLaFFPTIIHRLSPKTNLNSGQnIATHLTDMTWYEKSGPKGltnQQLPPIKT 571
|
570 580
....*....|....*....|....*..
gi 408772116 548 LSQVKEAQAQTVSMFILFSFIMVILLI 574
Cdd:MTH00066 572 ITNIQTGLIKTYLTLFLITLLLMLILL 598
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
20-447 |
4.71e-97 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 307.85 E-value: 4.71e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 20 AFVLSLFpLFWCFMSSQMVLLSWEVITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRFIMVVLL 99
Cdd:COG1009 41 AFVLSLL-LFPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLL 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 100 FILSMNFLVYIPNLMALLLGWDGLGIVSFVLV-IYYQNPSSLAAGMVTALANRVGDVMLILSIAWMVNQ-GHWNLILMFE 177
Cdd:COG1009 120 FMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIgFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIaGTLNFSELLA 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 178 NPYSG-------LLTGSILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEKTYWFNSVCL 250
Cdd:COG1009 200 AAPTIlssplltLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVA 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 251 GMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFICAGNVIHQHgGSQDVRF 330
Cdd:COG1009 280 IIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRK 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 331 MGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILE-IFFMQSGSFLMLMIIILSTLFTLMYSIRFSFFIIWGEQKK 409
Cdd:COG1009 359 MGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRP 438
|
410 420 430
....*....|....*....|....*....|....*...
gi 408772116 410 CALFSIGDEDKNVRLAQLALSTGAVFGGALFSWLLFPF 447
Cdd:COG1009 439 KTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLLEGL 476
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-578 |
9.46e-92 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 294.07 E-value: 9.46e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 1 MMMFKPVNFTLLMSNLLWTAFVLSLFPLFWCFMSSQ-MVLLSWEVITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTF 79
Cdd:MTH00108 24 TNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQeMIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEF 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 80 SVNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLV-IYYQNPSSLAAGMVTALANRVGDVMLI 158
Cdd:MTH00108 104 SMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAILYNRIGDIGFI 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 159 LSIAW-MVNQGHWNL--ILMFENPYSGLLTGSILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRF 235
Cdd:MTH00108 184 LAMAWfLLNLNSWDLqqIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRF 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 236 YPFLE--KTYWFNSVCLGmATLTCFMAgICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFI 313
Cdd:MTH00108 264 HPLMEnnKTIQTLTLCLG-AITTLFTA-ICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFM 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 314 CAGNVIHQHGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILSTLFTLM 393
Cdd:MTH00108 342 CSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAA 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 394 YSIRFSFFIIWGEQKKCALFSIGDEDKNVRLAQLALSTGAVFGGALFSWLLFPFPVMIILTPLQKSLILFSLTLTFFAMF 473
Cdd:MTH00108 422 YSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQMTMPLYLKLTALAVTILGFILA 501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 474 M-MEKMSYFKSMLSLSPLNSF---------IIHSLSTMWFLSLmfskisskaSMNLALMMTkasDQGWSEMFGGQGSFLL 543
Cdd:MTH00108 502 LeLNLLTNNLKFKYPSNTFKFsnmlgyfptIMHRLPPYMNLTM---------SQKLASMLL---DLIWLEKILPKTISLI 569
|
570 580 590
....*....|....*....|....*....|....*
gi 408772116 544 SKSiLSQVKEAQAQTVSMFILfSFIMVILLILMVF 578
Cdd:MTH00108 570 QMK-ASTTISNQKGLIKLYFL-SFLITLTLSLLLF 602
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
19-575 |
8.16e-83 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 270.93 E-value: 8.16e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 19 TAFVLSLFPLFWCFMS-SQMVLLSWEVITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRFIMVV 97
Cdd:MTH00137 46 TAFFVSLLPLFLFLNQgAETIITNWNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 98 LLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYY-----QNPSSLAAgmvtALANRVGDVMLILSIAWMV-NQGHWN 171
Cdd:MTH00137 126 LIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWygradANTAALQA----VIYNRVGDIGLILAMAWMAtNLNSWE 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 172 LILMFENPYSGLLTGSIL---LASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEKTYWFNSV 248
Cdd:MTH00137 202 IQQIFALSKDFDLTLPLLgliLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTT 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 249 CLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFICAGNVIHQHGGSQDV 328
Cdd:MTH00137 282 CLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDI 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 329 RFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFfmqSGSFL---MLMIIILSTLFTLMYSIRFSFFIIWG 405
Cdd:MTH00137 362 RKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEAL---NTSHLnawALTLTLIATSFTAVYSLRVVFFVSMG 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 406 EQKKCALFSIGDEDKNV-----RLAQlalstGAVFGGALFSWLLFPF--PVMIILTPLQKSLILFSLTLTFFAMFMMEKM 478
Cdd:MTH00137 439 HPRFNPLSPINENNPAVinpikRLAW-----GSIIAGLLITSNILPLktPVMTMPPLLKLAALIVTILGLLIALELASLT 513
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 479 S-YFKSMLSLSPlnsfiiHSLSTMW-FLSLMFSKISSKasMNLALMMTKAS---DQGWSEMFGGQGSFLLSKSILSQVKE 553
Cdd:MTH00137 514 NkQFKPTPTLPP------HHFSNMLgFFPAIIHRLTPK--LNLTLGQTIATqmvDQTWLEKTGPKGIASLQLPLITTTSN 585
|
570 580
....*....|....*....|....*.
gi 408772116 554 AQAQTV----SMFILFSFIMVILLIL 575
Cdd:MTH00137 586 IQQGMIktylTLFLLTLALATLLLLL 611
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
20-473 |
1.01e-81 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 268.00 E-value: 1.01e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 20 AFVLSLFPL--FWCFMSSQMV---LLSWevITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRFI 94
Cdd:TIGR01974 40 SAALSAFVFvdFFLNGEGEAFtqsLFPW--ISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 95 MVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLV-IYYQNPSSLAAGMVTALANRVGDVMLILSIAWMVNQ-GHWNL 172
Cdd:TIGR01974 118 AYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYfGTLNF 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 173 ILMF------ENPYSGLLTGSILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEKTYWFN 246
Cdd:TIGR01974 198 QEVFalapgaFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTAL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 247 SVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFICAGNVIHQHGGSQ 326
Cdd:TIGR01974 278 YLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQ 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 327 DVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILSTLFTLMYSIRFSFFIIWGE 406
Cdd:TIGR01974 358 DIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGK 437
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 408772116 407 QKKCALFSIGDEDKNVRLAQLALSTGAVFGGALFSWLLFP----FPVMIILTPLQKSLILFSLTLTFFAMF 473
Cdd:TIGR01974 438 ERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFlkgvLPTSAEPALEHHHVPALEIWSPTAVAI 508
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
16-409 |
3.73e-79 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 261.25 E-value: 3.73e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 16 LLWTAFVLSLFpLFWCFMSSQM-----VLLSWevITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFS 90
Cdd:PRK06590 38 LVGLSALLSLV-VFFDFLLGGGrafsqTLWTW--ISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGY 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 91 VRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLV-IYYQNPSSLAAGMVTALANRVGDVMLILSIAWMVNQ-G 168
Cdd:PRK06590 115 RRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIgFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEfG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 169 HWNLILMFENPYSGLLTGS---------ILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFL 239
Cdd:PRK06590 195 SLNYDEVFAAAPQFFGLGWsaltlicllLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLF 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 240 EKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFICAGNVI 319
Cdd:PRK06590 275 ELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVI 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 320 HQHGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIIlSTLFTLMYSIRFS 399
Cdd:PRK06590 355 HAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLFVAGLV-GAFLTAFYSFRLI 433
|
410
....*....|
gi 408772116 400 FFIIWGEQKK 409
Cdd:PRK06590 434 FLVFHGKEKE 443
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
54-578 |
2.59e-65 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 224.19 E-value: 2.59e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 54 FNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLV-I 132
Cdd:MTH00020 74 FGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 133 YYQNPSSLAAGMVTALANRVGDVMLILSIAWMVNQ-------GHWNLILMFENPYSGLLTGSILLASMTKSAQIPFSSWL 205
Cdd:MTH00020 154 WLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRfgsldfsSVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 206 PAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVM 285
Cdd:MTH00020 234 PDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYM 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 286 MTSLGLGAAMVAYFHMVTHAMFKALLFICAGNVIHQHGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKD 365
Cdd:MTH00020 314 VVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKD 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 366 LILEIFFMQSGSFLMLMIIILSTLFTLMYSIRFSF--FIIWGEQKKCALFSIGDEDKNVRLAQLALSTGAVFGGALFSWL 443
Cdd:MTH00020 394 LILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYltFLSNTNLKKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEM 473
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 444 LFPF--------PVMIILTPlqkslILFSLTLTFFAMFMMEKMSYFKSMLsLSPLNSFIIHSLSTMWFLSLMFSKISSKA 515
Cdd:MTH00020 474 IWSFqitlppivPLSIKLLP-----VFLSLGGIGLVIILYFYSSKTFRVP-FSFIGRNSYTFLGSAWQFNYILNYFLIKK 547
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 408772116 516 SMNLALMMT-KASDQGWSEMFGGQGsflLSKSILSQVKEaqAQTVSMFILFSFIMVILLILMVF 578
Cdd:MTH00020 548 IWKGGHLISyRTIDKGVLELVGPKG---ISNFLIILTQG--LSSLQSGLVFNYALVILIGVAIF 606
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
21-522 |
6.89e-61 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 210.16 E-value: 6.89e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 21 FVLSLFPLFWCFMSSQMVLLSWEVITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRFIMVVLLF 100
Cdd:MTH00095 6 FLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 101 ILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQNPSSLAAGMVTALANRVGDVMLILSIAWMVNQGHWNLILMFenpY 180
Cdd:MTH00095 86 VGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYYFFSFSF---F 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 181 SGLLTGSILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEkTYWFNSVCLGMATLTCFMA 260
Cdd:MTH00095 163 SSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLIL-NMNVMKIMLLIGLFTMFFS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 261 GICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFICAGNVIHQHGGSQDVRFMGNIWSTLPI 340
Cdd:MTH00095 242 SLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMF 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 341 TSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILSTLFTLMYSIRFSFFIIWGEQKKcalFSIGDEDK 420
Cdd:MTH00095 322 IQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKV---VNVYSSSV 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 421 NVRLAQLALSTGAVFGGALFSWLLFPFPVMIILTPLQKSLILFSLTLTFFAMFMMEKMSYFKSMLSLSPLNSFIIHSLST 500
Cdd:MTH00095 399 LMNFLSLMLVFFSVFFLWWLNFNLLNLPSLFLYLDFYVPLFYLFMIMLFSFFFFKLLFKELKYKFFVDYFAKNVIYKLKN 478
|
490 500
....*....|....*....|..
gi 408772116 501 MWFLSLMFSKISSKASMNLALM 522
Cdd:MTH00095 479 LKFFDLFLNKFGYKGFNFFSSF 500
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
7-368 |
9.68e-60 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 210.27 E-value: 9.68e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 7 VNFTLLMSnLLWTAFVLSLFPLFWCFMSSQMVLLSWEVITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSE 86
Cdd:PRK07376 39 PVAVLLIS-LVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAH 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 87 DPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLV-IYYQNPSSLAAGMVTALANRVGDVML---ILSIA 162
Cdd:PRK07376 118 DPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVgFWYDRKGAADAAQKAFVVNRVGDFGLllgILGLF 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 163 WMVnqGHWNLILMFENPYSGLLTGSI------------LLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVF 230
Cdd:PRK07376 198 WAT--GSFDFDGIADRLSELVSSGAVsgwlalllcilvFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVF 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 231 LLTRFYPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKAL 310
Cdd:PRK07376 276 LVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAM 355
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 408772116 311 LFICAGNVIHQHGG--------SQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLIL 368
Cdd:PRK07376 356 LFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEIL 421
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
60-572 |
1.61e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 207.12 E-value: 1.61e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 60 LYGTVfSSTVLLISASVVT----FSVNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQ 135
Cdd:MTH00032 77 LYDTL-SVTMLLVISSISTlvhiYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 136 NPSSLAAGMVTAL-ANRVGDVMLILSIAWM-----------VNQGHWNLILMFENPYSGLLTGS-----------ILLAS 192
Cdd:MTH00032 156 TRIQANKAAIKAIvVNRVGDVGVILGMVLIyktigsldfltFNGGSVGSGIMDRGYYGGGAYESplapfaiigilLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 193 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKK 272
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKK 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 273 IIALSTLSQLGVMMTSLGL-GAAMVAYFHMVTHAMFKALLFICAGNVIHQHG-GSQDVRFMGNIWSTLPITSSCLNVANL 350
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 351 ALCGLPFMAGFYSKDLILEIFFM------------------------------------QSGSFLMLMIIILSTLFTLMY 394
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILELTYSgrnmgipfgssllkiqgdigikkddrgsiggpegypSRGSAFAFWLGTVAALLTAFY 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 395 SIRFSF--FIIWGEQKKCALFS--IGDEDKNVRLAQLALSTGAVFGGALFSWLLFPFPVMIILTPLQKSLI----LFSLT 466
Cdd:MTH00032 476 SIRLVYitFIISPNSPKESLISshINIVDKRVLTVLSLLCFGAIFVGYLIQDILIGDIEHPIVPPLIKVMPtlmgLFGMG 555
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 467 LTFFAMFMMEKMSYFKSMLSLSPLNSFIIHS-LSTMWFLSLMFSKISSKASMNLALMMT-KASDQGWSEMFGGQGSFLLS 544
Cdd:MTH00032 556 LCLWAQKGTREGELYWGFDPIGPSFLLSIYSfLGGAWQGDHLINKLVAIPLFSFGHWGIyKTLDRGWLELFGPQGISTIA 635
|
570 580 590
....*....|....*....|....*....|
gi 408772116 545 KSILSQVKEAQAQTVSMF--ILFSFIMVIL 572
Cdd:MTH00032 636 LRVSQFISNLQSGVISRYalVLLSFTIIFL 665
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
72-503 |
2.86e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 202.55 E-value: 2.86e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 72 ISASVVTFSVNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLV-IYYQNPSSLAAGMVTALAN 150
Cdd:MTH00210 92 VSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWLTRIKANKAAIKAMLIN 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 151 RVGDVMLILSIAWMVNQ-GHWN-------LILMFENPYSGLLTGSILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSS 222
Cdd:MTH00210 172 RVGDIGLVLAMIMILKEfGTLEfstisslLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAA 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 223 TLVTAGVFLLTRFYPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMV 302
Cdd:MTH00210 252 TMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLM 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 303 THAMFKALLFICAGNVIHQHGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLM 382
Cdd:MTH00210 332 NHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYW 411
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 383 IIILSTLFTLMYSIRFSF--FIIWGEQKKCALFSIGDEDKNVRLAQLALSTGAVFGGALFSWLLFPFPVMIILTPLQKSL 460
Cdd:MTH00210 412 LGSFSALLTAFYSIRLIYltFITNTNSKKEVFIGVHESSWNITFPLLLLAFGSIFVGYLGKEVVLSNVIPPIVPNSIKMI 491
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 408772116 461 -ILFSLTLTFFAMFMmekmsYFKSMLSLSPLNSFIIHSLSTMWF 503
Cdd:MTH00210 492 pLLFSLLGALLAFVI-----YNSMVFLIKISRRGVSIRLYHVIY 530
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
48-400 |
4.33e-52 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 192.18 E-value: 4.33e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 48 GSSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVS 127
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 128 FVLvIYYQNPSSLAAGMVTALANRVGDVMLILSIAWMVNQ-GHWNLILMFENPY----SGLLTGS---ILLASMTKSAQI 199
Cdd:PRK12650 147 FFL-IARSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQtGTTSLSGILHSDVwaekPGLTTVVavlIAVAAFTKSAQF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 200 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTL 279
Cdd:PRK12650 226 PFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 280 SQLGVMMTSLGLG---AAMVAYFHMVTHAMFKALLFICAGNVIHQhGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLP 356
Cdd:PRK12650 306 SQLGWIVATIGVGtpfALTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVP 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 408772116 357 FMAGFYSKDLILEIF----FMQSGSFLMLMIIILSTLFTLMYSIRFSF 400
Cdd:PRK12650 385 PLFGFVSKEGMLTAFleapGGNAGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
18-398 |
5.62e-49 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 182.70 E-value: 5.62e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 18 WTAFVLSLFPLFWCFMSSQMVL----LSWEVITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMS-EDPFSvR 92
Cdd:PRK12648 30 WLAGLVALAALVLLALLYPAVAagevIRAEIEWLPALGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSpADPVP-R 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 93 FIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIY-YQNPS----SLAAGMVTA---LANRVGdVMLILSIAwm 164
Cdd:PRK12648 109 FFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYwHHRADarrgARMALTVTGaggLALLAG-VLLLGHIV-- 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 165 vnqGHWNL--IL-----MFENPYSGLLTGSILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYP 237
Cdd:PRK12648 186 ---GSYDLdvVLaagdlIRAHPLYPPALVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWP 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 238 FLEKT-YWFNSVCL-GMATLtcFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLG---AAMVAYFHMVTHAMFKALLF 312
Cdd:PRK12648 263 VLAGTeEWFWIVGGaGLITL--LLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGsplAAVAAIFHIINHATFKASLF 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 313 ICAGNVIHQhGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLIL-EIFFMQSGSFLMLMIIILSTL-- 389
Cdd:PRK12648 341 MAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFaETLDTHLLGSLDWLLPVAATLag 419
|
410
....*....|
gi 408772116 390 -FTLMYSIRF 398
Cdd:PRK12648 420 aFSVAYSLRF 429
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
54-398 |
2.75e-46 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 168.40 E-value: 2.75e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 54 FNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIY 133
Cdd:COG0651 70 IVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 134 YQNPSSLAAGMVTALANRVGDVMLILSIAWM-VNQGHWNLILM------FENPYSGLLTGSILLASMTKSAQIPFSSWLP 206
Cdd:COG0651 150 GGTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLaarlaeLDPGLLLAAFALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 207 AAMA-APTPVSALVhSSTLVTAGVFLLTRFYPFL---EKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQL 282
Cdd:COG0651 230 DAYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 283 GVMMTSLGLGAAMV---AYFHMVTHAMFKALLFICAGNVIHQhGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMA 359
Cdd:COG0651 309 GYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERA-TGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330 340 350
....*....|....*....|....*....|....*....
gi 408772116 360 GFYSKDLILEIFFmQSGSFLMLMIIILSTLFTLMYSIRF 398
Cdd:COG0651 388 GFVSKWLLLQAAL-EAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
52-409 |
3.43e-46 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 173.88 E-value: 3.43e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 52 LEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLV 131
Cdd:TIGR00940 67 LNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 132 IYYQN--PSSLAAGMVTALANRVGDVMLILSIAWMVNQGHWNLILMFE-------NPYSGLLTGSILLASMTKSAQIPFS 202
Cdd:TIGR00940 147 SYWHHraHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIAsadairnSPLFGTAMVLVLLGAFTKSAQFPFH 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 203 SWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQL 282
Cdd:TIGR00940 227 IWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 283 GVMMTSLGLG----------------AAMVAYFHMVTHAMFKALLFICAGNVIHQhGGSQDVRFMGNIWSTLPITSSCLN 346
Cdd:TIGR00940 307 GLIMVLLGLGspsyhyqgddskiyalAAVAAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAM 385
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 408772116 347 VANLALCGLPFMAGFYSKDLILE---------IFFMQSGSFLMLMIIILSTLFTLMYSIRFSFFIIWGEQKK 409
Cdd:TIGR00940 386 IASAAMAGVPPFNGFLSKEMFFAeaitahlvnPFDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFGRPKP 457
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
111-387 |
2.91e-45 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 161.71 E-value: 2.91e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 111 PNLMALLLGWDGLGIVSFVLVIYY-QNPSSLAAGMVTALANRVGDVMLILSIAWMVNQGHW----NLILMFENPYSG--- 182
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTlsfdELSKALTGGLNSsgl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 183 -LLTGSILLASMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVFLLTRFYPFLEKTYWFNSVCLG-MATLTCFM 259
Cdd:pfam00361 82 lLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIQQILLiLAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 260 AGICAMQEYDMKKIIALSTLSQLGVMMTSLGLG---AAMVAYFHMVTHAMFKALLFICAGNVIHQHGGSQDVRFMGNIWS 336
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 408772116 337 TLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILS 387
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
21-405 |
1.75e-44 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 169.72 E-value: 1.75e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 21 FVLSLFP---LFWcfmssqmVLLSWEVITLG-----------SSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSE 86
Cdd:PRK12644 28 YVLALVPaaaFVW-------VLAQWPAVLAGgaptevvpwipSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDD 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 87 D-PFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQNP-----SSLAAGMVTALAnrvGDVMLILS 160
Cdd:PRK12644 101 DePRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERaasrrAALQALLVTTAG---GLAMLVGI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 161 IAWMVNQGHWNLILMFENPYSGLLTGS----ILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFY 236
Cdd:PRK12644 178 IILGQAAGTYRLSELLADPPTGPAVSVavvlILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 237 P-FLEKTYWFNSVcLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLG--AAMVAYFHMVT-HAMFKALLF 312
Cdd:PRK12644 258 PgFADVPVWRPTV-LVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGtrDAALAGLAMLLaHALFKAALF 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 313 ICAGNVIHQhGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFF----MQSGSFLMLMIIILST 388
Cdd:PRK12644 337 LVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLhdgaLGPAGPVVLAGIVLGS 415
|
410
....*....|....*..
gi 408772116 389 LFTLMYSIRFsffiIWG 405
Cdd:PRK12644 416 ILTVAYSLRF----LWG 428
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
22-402 |
1.43e-43 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 162.74 E-value: 1.43e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 22 VLSLFPLFWCFMSSQMVLLSWEVITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRFIMVVLLFI 101
Cdd:MTH00063 7 LLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 102 LSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQNPSSLAAGMVTALANRVGDVMLILSIAWMVNQGHWNLILMFenpys 181
Cdd:MTH00063 87 LVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSFLCCL----- 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 182 glltgSILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLektyWFNSVCLG---MATLTCF 258
Cdd:MTH00063 162 -----FFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLL----GFSWLSIFfsvLLLLTIF 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 259 MAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFICAGNVIHQHGGSQD-----VRFMGN 333
Cdd:MTH00063 233 ITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSsncvySSILYG 312
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 408772116 334 IWStlpITSSCLNVanLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILSTLFTLMYSIRFSFFI 402
Cdd:MTH00063 313 SWN---LFYLFLLV--LGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLIL 376
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
18-393 |
1.34e-42 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 163.17 E-value: 1.34e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 18 WTAFVLSLFP--LFWCFMSSQMVLLSWEVITLG-----SSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFS 90
Cdd:PRK12647 15 NAGWLLALLPlaLFLYFLSFIPEIAAGETVRGGyawvpSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 91 VRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIY-YQNPSS----LAAGMVTA---LANRVGDVMLIL--- 159
Cdd:PRK12647 95 GRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFnHEREAArraaLQALLVTGgggLALLAGLILLGNvtg 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 160 --SIAWMVNQGHwnliLMFENPYSGLLTGSILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYP 237
Cdd:PRK12647 175 tySLSELLASGD----VIREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNP 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 238 FLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLG--VMMTSLGLGAAMVAYF-HMVTHAMFKALLFIC 314
Cdd:PRK12647 251 VLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGtlVMLLGLGSELAIKAAVlFLVAHSLYKGALFMV 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 315 AGNVIHQhGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILE-IFFMQSGSFLMLMIIILSTLFTLM 393
Cdd:PRK12647 331 AGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEaLLEAPLWSLILTVAAVLGNALMVA 409
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
52-406 |
1.87e-41 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 159.92 E-value: 1.87e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 52 LEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSV-RFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVL 130
Cdd:PRK12646 70 INLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 131 VIYYQNPSSLAAG-----MVT---ALANRVGDVMLIL-----SIAWMVNQGHwnliLMFENPYSGLLTGSILLASMTKSA 197
Cdd:PRK12646 150 ISYWYNNGDSQFGaiqsfMITvfgGLALLVGFIMLYImtgtnNITEILGQAD----HIKNHGLFIPMIFMFLLGAFTKSA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 198 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALS 277
Cdd:PRK12646 226 QFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 278 TLSQLGVMMTSLGLGAAMV-----------------AYFHMVTHAMFKALLFICAGnVIHQHGGSQDVRFMGNIWSTLPI 340
Cdd:PRK12646 306 TISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvlfaALFHLMNHAIFKCALFMGVG-IIDHEAGTRDIRILSGMRQLFPK 384
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 408772116 341 TSSCLNVANLALCGLPFMAGFYSKDLILEIF--------FMQSGSFLMLMIIILSTLFTLMYSIRFSFFIIWGE 406
Cdd:PRK12646 385 MNLVMTIAALSMAGVPFLNGFLSKEMFLDALtqtgqlsqFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWGK 458
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
54-408 |
3.52e-40 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 156.24 E-value: 3.52e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 54 FNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSV-RFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVI 132
Cdd:PRK12645 72 FTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 133 Y--------YQNPSSLAAGMVTALANRVGDVMLIL-----SIAWMVNqghwNLILMFENPYSGLLTGSILLASMTKSAQI 199
Cdd:PRK12645 152 YwyereasrYGAQKSMLITVFGGLSMLGGFILLYImtgsfSIREMIA----NADEIQNSPLFIPAMILILLGAFTKSAQF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 200 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYP-FLEKTYWFNSVCL-GMATLtcFMAGICAMQEYDMKKIIALS 277
Cdd:PRK12645 228 PFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPiFAGSQVWFWTVTLvGLITL--FWGSLNAVKQTDLKGILAFS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 278 TLSQLGVMMTSLGLGAA----------------MVAYFHMVTHAMFKALLFICAGNVIHQhGGSQDVRFMGNIWSTLPIT 341
Cdd:PRK12645 306 TVSQLGLIMSLLGIGAAslhyqgddskiyaaaiTAAIFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPIT 384
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 408772116 342 SSCLNVANLALCGLPFMAGFYSKDLILE---------IFFMQSGSFLMLMIIILSTLFTLMYSIRFSFFIIWGEQK 408
Cdd:PRK12645 385 FTIALIGALSMAGLPPFNGFLSKEMFFEsmlnateanLFSLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFGKYK 460
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
23-390 |
1.36e-39 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 150.89 E-value: 1.36e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 23 LSLFPLFWCFMSSQMVLLSWEVITLGSSKLeFNLLVDLYGTVFSSTVLLISASVVTFSVNYMS----EDPFSV---RFIM 95
Cdd:PRK06525 39 LCMLSLAYAFYQAGKVAVTLTLVNLGDVAL-FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrEHPVHEgtgRYYA 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 96 VVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQNPSSLAAGMVTALANRVGDVMLILSIAWMVNQGH----WN 171
Cdd:PRK06525 118 FLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGtfalSA 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 172 LILMFENPYSgLLTGSILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEK-TYWFNSVCL 250
Cdd:PRK06525 198 LSGLHGSLKY-LVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiPHVIGYVGA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 251 GMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLG------AAMVAYFHMVTHAMFKALLFICAGnVIHQHGG 324
Cdd:PRK06525 277 VMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgsrlALEGSIAYIFNHAFAKSLFFLVAG-ALSYSCG 355
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 408772116 325 SQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILSTLF 390
Cdd:PRK06525 356 TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLI 421
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
52-368 |
1.37e-39 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 154.28 E-value: 1.37e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 52 LEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLV 131
Cdd:CHL00025 83 LEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLI 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 132 -IYYQNPSSLAAGMVTALANRVGDVML---ILSIAWMVNQGHW--------NLI------LMFENPYSGLLtgsiLLASM 193
Cdd:CHL00025 163 gFWFTRPIAANACQKAFVTNRVGDFGLllgILGFYWITGSFEFrdlfeifnNLIynnevnLLFATLCAFLL----FLGPV 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 194 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYP-FLEKTYWFNSVCLgMATLTCFMAGICAMQEYDMKK 272
Cdd:CHL00025 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPlFIVIPYIMNLISL-IGIITALLGATLALAQKDIKR 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 273 IIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFICAGNVIHQHGG--------SQDVRFMGNIWSTLPITSSC 344
Cdd:CHL00025 318 GLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPivgyspdkSQNMVLMGGLRKYMPITKTT 397
|
330 340
....*....|....*....|....
gi 408772116 345 LNVANLALCGLPFMAGFYSKDLIL 368
Cdd:CHL00025 398 FLLGTLSLCGIPPLACFWSKDEIL 421
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-462 |
6.53e-38 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 149.59 E-value: 6.53e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 47 LGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIV 126
Cdd:PRK12649 67 LPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSIT 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 127 SFVLVIYYQNPSSLAAGMVTALANRVGD--VMLILSIAWMVNQGHWNLILMFENPY-------SGLLTGS---ILLASMT 194
Cdd:PRK12649 147 SFMLIGYWRHRPESVYGATKSLLITAGGglFMFAGFLLLHVITGTYDIATILQDSElienikgHPLFLITlilIFIGAAA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 195 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKII 274
Cdd:PRK12649 227 KSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAIL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 275 ALSTLSQLGVMMTSL--------GLGAAmVAYFHMVTHAMFKALLFICAGNVIHQhGGSQDVRFMGNIWSTLPITSSCLN 346
Cdd:PRK12649 307 AYSTISQLAYLMTMYgyttyhepGLGVA-AATFHLLNHATFKACLFLVAGIVAHE-AATRDIRKLGGLRKEMPITFIVAS 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 347 VANLALCGLPFMAGFYSKDLI----LEIFFMQSGSFLMLM--IIILSTLFTLMYSIRFSFFIIWGEQKKCALFSIGDEDK 420
Cdd:PRK12649 385 IAALAMAGIPPLNGFLSKEMFyetsVEMGALIGGPFTIIIpaVAVLGGVFTFAYSIKLIDGIFLGERTHDHLPHHIHEAP 464
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 408772116 421 NVRLAQLALSTGAVfggaLFSWLLFPFPVMIILTPLQKSLIL 462
Cdd:PRK12649 465 YVMLIPAAFLAGLV----ILFGLVPSIPIHNIIEPATSGIVL 502
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-408 |
4.12e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 124.31 E-value: 4.12e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 58 VDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQN- 136
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDr 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 137 PSSLAAGMVTALANRVGDVMLILSIAWMVNQ-GHWNLILM------FENPYSGLLTGSILLAS-----------MTKSAQ 198
Cdd:PRK12667 160 GDAVEAAIKYALIGAVGTTLYFLALAFLYATfGTLNMADLsakirgLSFPLTGGLAGNPPLALgvalalalwafTIKAAI 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 199 IPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVFLLTRFY--------PFLEKTYWFNSVCLGMATLTCFMAGICAMQEYD 269
Cdd:PRK12667 240 FPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 270 MKKIIALSTLSQLGVMMTSLGLGAAMV---AYFHMVTHAMFKALLFICAGNVIHqHGGSQDVRFMGNIWSTLPITSSCLN 346
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIH-AAGTRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 408772116 347 VANLALCGLPFMAGFYSKDLILEIfFMQSGSFLMLMIIILSTLFTLMYSIRFSFFIIWGEQK 408
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNA-LLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPK 458
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
65-406 |
8.66e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 110.74 E-value: 8.66e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 65 FSSTVLLISASVVTFSV--NYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQNPSSLAA 142
Cdd:PRK08375 78 LSALFLLVTSILAIAALlyAIGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRRALAA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 143 GMVTALANRVGDVMLILSIAWM-VNQGHWNLILMFEN-PYSGLL---TGSILLASMTKSAQIPFSSWLPAAMAAPTPVSA 217
Cdd:PRK08375 158 ARKYLIVGLIGSTFLLIGVGLLyGVTGTLNMADLAGAlAENPTVvtaFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 218 LVHSSTLVTAGVFLLTRFY-----PFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLG 292
Cdd:PRK08375 238 ALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 293 ---AAMVAYFHMVTHAMFKALLFICAGNVIHQHgGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILE 369
Cdd:PRK08375 318 tplALAAGLLHLLHHALMKGALFLAAGAIEVTY-GTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVV 396
|
330 340 350
....*....|....*....|....*....|....*..
gi 408772116 370 IfFMQSGSFLMLMIIILSTLFTLMYSIRFSFFIIWGE 406
Cdd:PRK08375 397 G-AVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGP 432
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
16-389 |
2.80e-24 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 107.12 E-value: 2.80e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 16 LLWTAFVLSLFPLFWCFMSSQMVLLSWEVItlgsSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRFIM 95
Cdd:PRK08667 37 LVIAIALLLFAGSLQLFTGNPLDIPLWGIA----PGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 96 V---VLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIY-YQNPSSLAAGMVTALANRVGDVMLILSIAWMVNQ-GHW 170
Cdd:PRK08667 113 LsalTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQtGSF 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 171 NLILMfeNPYSGLLTGSILLASMT---KSAQIPFSSWLPAAM-AAPTPVSALVHSSTLVTAGVFLLTRFYPFLEKTYWFN 246
Cdd:PRK08667 193 ELSPL--GASAGILSLVFLLLFLGfgiKAGIIPFHKWLPYAHpASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWG 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 247 SVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLG--------------AAMVAYFHMVTHAMFKALLF 312
Cdd:PRK08667 271 VLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYvifgvygldtlallALGGALFHSLNHALFKSLLF 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 313 ICAGNVIHQhGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFF----MQSGSFLMLMIIILST 388
Cdd:PRK08667 351 LTAGSVVHA-TGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFqsfsVADPLIKILLFSVLAI 429
|
.
gi 408772116 389 L 389
Cdd:PRK08667 430 F 430
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
37-321 |
2.13e-23 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 104.01 E-value: 2.13e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 37 MVLLSWEVITLGSSKLEFNLL-VDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMA 115
Cdd:PRK08168 45 LALLGLVLFATGAAWPAAAWLeVSGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLV 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 116 LLLGWDGLGIVSFVLVIYYQN-PSSLAAGMVTALANRVGDVMLILSIAWMVNQ-GHWNLILMFEN----PYSGLLTGSIL 189
Cdd:PRK08168 125 LIAAWAAISLALHRLLCFYPDrPFARLAAHKKFIADRLAELLLLAAAALAYLEvGSLSLSALWAHlaaqGASPSLQAAAL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 190 L---ASMTKSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVFLLTRFYPFLEKTYWFNSVCLGMATLTCFMAGICAMQ 266
Cdd:PRK08168 205 LlvlAVILKTAQLPVHGWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLT 283
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 408772116 267 EYDMKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFICAGNVIHQ 321
Cdd:PRK08168 284 RISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAVRD 338
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
113-473 |
4.75e-22 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 99.97 E-value: 4.75e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 113 LMALLLGWDGLGIVSFVLVIYYQNPSSLAAGMVTALANRVGDVMLILSIAWMVNQ-GHWNLILMFenPYSGLLTGSILLA 191
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAEtGSFAFGAIA--GLGGTAAWLILIG 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 192 SMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEKTYWFNSVclgMATLTCFMAGIcamqEYDMK 271
Cdd:PRK12668 193 FGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELLIYIGAA---MAVYGVFFALL----ENDLR 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 272 KIIALSTLSQLGVMMTSLGLGAAMV---AYFHMVTHAMFKALLFICAGNVIHQHGGSqDVRFMGNIWSTLPITSSCLNVA 348
Cdd:PRK12668 266 RLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTGTE-KLTELGGLYRSMPLTALFCLVG 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 349 NLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILSTLFTLMYSIRFSFFIIWGEQKKcalFSIGDEDKNVRLAQLA 428
Cdd:PRK12668 345 ALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAGTFLHFGIKLPYFAFFGGDSG---LRVKDAPRNMLVAMGI 421
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 408772116 429 LSTGAVFGGALFSWL--LFPFPVmiILTPLQKSLILFSLTLTFFAMF 473
Cdd:PRK12668 422 AAFLCIAIGVYPQALyaLLPYPV--DYEPYTASHVLEQLQLLLFTAL 466
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
43-376 |
1.11e-21 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 99.19 E-value: 1.11e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 43 EVITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSE----DPFSVRFIMVvlLFILSMNFLVYIPNLMALLL 118
Cdd:PRK06521 63 AVLPLGLPFLPFHLRLDALSAFFLLVISLLGAAASLYSLGYFREyegkGPGAMGFFYN--LFLASMVLVLLADDAFSFLV 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 119 GWDGLGIVSFVLVIYYQ-NPSSLAAGMVTALANRVGDVMLILSIAWM-VNQGHWNLILMFENPYSGLLTGSILLASM--- 193
Cdd:PRK06521 141 AWETMSLSSWFLVIANHrEAEIRRAGFLYLLMAHAGALAILLAFGLLaRESGSYDFAAMRAAHLSPFWASLVFLLALfgf 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 194 -TKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVFLLTRF-YPFL-EKTYWFNSVCLGMATLTCFMAGICAMQEYD 269
Cdd:PRK06521 221 gAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVvFDLLgAPGWWWGVLVLALGAISAVLGVLYALAEHD 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 270 MKKIIALSTLSQLGVMMTSLGLGAAMVAY--------------FHMVTHAMFKALLFICAGNVIHQhGGSQDVRFMGNIW 335
Cdd:PRK06521 300 LKRLLAYSTIENIGIIFVGLGLAMVFIAYgmpllaalaltaalYHLLNHALFKSLLFLGAGAVLHA-TGTRDMEKLGGLI 378
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 408772116 336 STLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSG 376
Cdd:PRK06521 379 RRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSSPG 419
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
55-398 |
4.11e-21 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 96.76 E-value: 4.11e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 55 NLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFsVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYY 134
Cdd:PRK08377 73 NLYIGPFAALFVLIIAIVSFIMSIFSLKAVEVEPI-DKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYN 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 135 QNPSSLAAGMVTALANRVGD------VMLILSIAWMVNQGHWNLILMFENPYSGLLT-GSILLASMTKSAQIPFSSWLPA 207
Cdd:PRK08377 152 KTGEAAEASMKYIVLGGIGSsffligVALIYGATGTLNMAHIAQLAGTIDPTVAQVGlALLIFGLAVEAELFPLNAWAPD 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 208 A-MAAPTPVSALVhSSTLVTAGVFLLTRFYPFLEKTYWFNSV---CLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLG 283
Cdd:PRK08377 232 AyQAAPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVlklVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVG 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 284 VMMTSLGLG---AAMVAYFHMVTHAMFKALLFICAGNVIHQHGGSQDVRFMGnIWSTLPITSSCLNVANLALCGLPFMAG 360
Cdd:PRK08377 311 MIALALALGtqaGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEG-LGKRMPLTALALTIGALSTVGIPLFNV 389
|
330 340 350
....*....|....*....|....*....|....*...
gi 408772116 361 FYSKDLILeIFFMQSGSFLMLMIIILSTLFTLMYSIRF 398
Cdd:PRK08377 390 FWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
62-402 |
5.38e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 96.42 E-value: 5.38e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 62 GTVFSSTVLLISASVVTFSVNYMSED--PFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQNPSS 139
Cdd:PRK06589 85 GLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNIS 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 140 LAAG-------MVTALANRVGDVMLILSiawMVNQGHWNLILMFENPYSgLLTGSILLASMTKSAQIPFSSWLPAAMAAP 212
Cdd:PRK06589 165 LSGGykylkilMISALLLFLPAVILIYT---KTGNLDFVSGGLFSKNQS-IILLLMFIYGIAKTAIFPVHSWLPAAMVAH 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 213 TPVSALVHSSTLVTAGVFLLTR--FYPF----LEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMM 286
Cdd:PRK06589 241 YPVSALLHAVIVVKTGLFCIYKilLYIFglsyLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLAL 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 287 TS---LGLGAAMVAYFHMVTHAMFKALLFICAGNVIHQHGGSQDVRFMGnIWSTLPITSSCLNVANLALCGLPFMAGFYS 363
Cdd:PRK06589 321 LSafiLTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHG-TSKSFPLISFIISISSLSLIGIPIFSGFIS 399
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 408772116 364 KDLILEIFFMQS---GSFLMLMIIILSTLFTLMYSIRFSFFI 402
Cdd:PRK06589 400 KFLILLAASEQNqpwLSIIVMLVVIASSILSALYLLKILSSI 441
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-410 |
3.98e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 94.01 E-value: 3.98e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 58 VDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQN- 136
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDt 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 137 PSSLAAGMVTALANRVGDVMLILSIAWMVNQ-GHWNL----ILMFENPYS------GLLTGSILLasmtKSAQIPFSSWL 205
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLYGQyGTLNMaylaVKMSENPTVvakialALFIAGLAM----KSGAVPVHMWL 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 206 PAAM-AAPTPVSALVHSSTLvtAGVFLLTRFYpFLEKTYWFNSVCLG-----MATLTCFMAGICAMQEYDMKKIIALSTL 279
Cdd:PRK08376 244 PDAYpAAPSSISAMLLVIKQ--AGLYALARVL-FSIYGPAINLATVGwviiiLGCLTMFVGVAMAVVQKDVKRLLAYHSV 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 280 SQLGVMMtsLGLGAAMVAY-----------------FHMVTHAMFKALLFICAGNVIHQHgGSQDVRFMGNIWSTLPITS 342
Cdd:PRK08376 321 SQIGYML--LGLGVGLAALgdpamasygeialaggiYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTT 397
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 408772116 343 SCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGsfLMLMIIILSTLFTLMYSIRFSFFIIWGEQKKC 410
Cdd:PRK08376 398 IAFLIGAAAIVGLPPFNGFASKWLIYESSALFNP--ILGVIAMIGSVLTLASFVKVFHTAFFGPPSEK 463
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
148-385 |
7.42e-20 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 93.44 E-value: 7.42e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 148 LANRVGDVMLILSIAWMVNQ-GHWNLILMFE-------NPYSGLLTGSILLAS-MTKSAQIPFSSWLPAAMAAPTPVSAL 218
Cdd:PRK07390 178 LTKRVGDLLLLMGVVALSPLaGTLNFSDLAAwaatanlDPLTATLLGLALIAGpTGKCAQFPLHLWLDEAMEGPNPASIL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 219 vHSSTLVTAGVFLLTRFYPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAMVAY 298
Cdd:PRK07390 258 -RNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIAL 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 299 FHMVTHAMFKALLFICAGNVIHQHgGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSF 378
Cdd:PRK07390 337 LLLLTHAIAKALLFMSVGSIILTT-ITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWL 415
|
....*..
gi 408772116 379 LMLMIII 385
Cdd:PRK07390 416 VGVLLLV 422
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-369 |
1.35e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 91.94 E-value: 1.35e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 53 EFNLLVDLYGTVFsstvlLISASVVTFSVNYMSEDPFSVRFI-MVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLV 131
Cdd:PRK07234 60 GVTLRADALSGYF-----ILTNALVTLAVIFYCWESAKTRFFyAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLV 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 132 IYYQNPSSLAAGMVTALANRVGDVMLILSIAwMVNQGHWNLilmfenPYSGLLTGS------ILLASMTKSAQIPFSSWL 205
Cdd:PRK07234 135 AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAV-LVYQANGTF------AFSGLATADpeafalIALGLLVKGGIFVSGLWL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 206 PAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEKTYWFNSVclgMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVM 285
Cdd:PRK07234 208 PLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRI---FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFI 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 286 mtslgLGAAMVAYFHMVTHAMFKALLFICAGnVIHQHGGSQDVRFMGNIWSTLPITssclnVANLALCGLPFMAGFYSKD 365
Cdd:PRK07234 285 -----LAAPLVGGLYALAHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKV 353
|
....
gi 408772116 366 LILE 369
Cdd:PRK07234 354 LTLK 357
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
394-577 |
2.33e-19 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 85.68 E-value: 2.33e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 394 YSIRFSFFIIWGEQKKCALFSIGDEDKNVRLAQLALSTGAVFGGALFSWLLFPFPVMIILTPLQKSLILFSLTLTFFAMF 473
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 474 MMEKMSYFksmLSLSPLNSFIIHSLSTMWFLSLMFSKISSKASMNLALMMTKASDQGWSEMFGGQGSFLLSKSILSQVKE 553
Cdd:pfam06455 81 ELSNLSNK---QLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQN 157
|
170 180
....*....|....*....|....
gi 408772116 554 AQAQTVSMFILFSFIMVILLILMV 577
Cdd:pfam06455 158 SQKGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
66-323 |
3.81e-17 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 84.32 E-value: 3.81e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 66 SSTVLLISASVVTFSVNYMSEDPfSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQNPSSLA--AG 143
Cdd:PRK08601 78 AFFVLTLGFIIQRFSVRYLLGDR-SYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNKGWKVAreAA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 144 MVTALANRVGDVMLILSIAWM-VNQGHWNLILMFENPYSGLLTGS--------ILLASMTKSAQIPFSSWLPAAMAAPTP 214
Cdd:PRK08601 157 KISGMLFLISWLALALAIVWLfIATGEWQLTSVLSNENLAQLGTWektginllLILAVMIPAAQWPFQRWLIESAVAPTP 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 215 VSALVHSStLVTAGVFLLTRFYPFLEKTyWFNSVCLGMATLTCFM-AGICAMQeYDMKKIIALSTLSQLGVMMTSLGLGA 293
Cdd:PRK08601 237 VSAIMHAG-LVNAGGIMLTRFSPLFHDD-IAQILLLIFASISVLIgTGISLVQ-VDYKRQLVGSTMAQMGFMLVQCALGA 313
|
250 260 270
....*....|....*....|....*....|
gi 408772116 294 AMVAYFHMVTHAMFKALLFICAGNVIHQHG 323
Cdd:PRK08601 314 YSAAIIHLILHGLFKATLFLQSGSAVPRFN 343
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
152-397 |
4.56e-17 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 83.98 E-value: 4.56e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 152 VGDVMLILSIAWMVNQGH---WNLILMFENPYSG----LLTGSILLASMTKSAQIPFSSWLP-AAMAAPTPVSALvHSST 223
Cdd:COG1008 172 AGSLLMLVAILALYFLAGaltFDIAELAAAPLPLtaqlLLFLAFFIAFAVKVPMFPFHTWLPdAHVEAPTAGSVL-LAGV 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 224 LVTAGVFLLTRF-YPFL-EKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVM------MTSLGLGAAM 295
Cdd:COG1008 251 LLKMGGYGLLRFaLPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVllgifaLNPLGLQGAV 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 296 vayFHMVTHAMFKALLFICAGnVIHQHGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFmqS 375
Cdd:COG1008 331 ---LQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAF--Q 404
|
250 260
....*....|....*....|..
gi 408772116 376 GSFLMLMIIILSTLFTLMYSIR 397
Cdd:COG1008 405 VNPWLAILAALGLILTAAYLLW 426
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
20-473 |
4.11e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 81.58 E-value: 4.11e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 20 AFVLSLFPLFWCFMSSQMVLLSWEVITLGsskLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSvrFIMVVLL 99
Cdd:PRK08668 32 NALPLLFLIKLYFTLKVGTGEKLTLFFGG---FKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAY--FNMFALM 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 100 FILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQNPSSLAAgMVTALANRVGDVMLILSIAWMVNQGHwnlILMFENP 179
Cdd:PRK08668 107 SLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKESRKAS-LKYFVLSAIGAYAMLYAIFLIYAKTG---TFDFADI 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 180 YSGLLTGS-----------ILLASMTKSAQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVFLL---------TRFYPF 238
Cdd:PRK08668 183 SQGLINDTstgfalivflfLLAFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFllvlyvlpgTKLFSE 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 239 LEK---TYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLGAAM---VAYFHMVTHAMFKALLF 312
Cdd:PRK08668 262 FGTyrgVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLgfaGGLFHVFNHALFKGLFF 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 313 ICAGNVIHQHGGSQDVRFMGNIWStLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQsGSFLMLMIIILSTLFTL 392
Cdd:PRK08668 342 LIFAAVIYRTGTTKISEMGGLIEK-MPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISK-GMPITAFMAFFGSIGSF 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 393 MYSIRFSFFIIWGEQKKcalfsigdEDKNVRLAQLALSTG-AVFGGALFSWLLFPFPVMIILTPLQKSLILFSLTLTFFA 471
Cdd:PRK08668 420 LYVFRPLAGVFLGQLPS--------DHKDVKEAPLPMLIPmAILVLLNVVFGVAPGLVLQEINKIFGELGIGPIDYEGWE 491
|
..
gi 408772116 472 MF 473
Cdd:PRK08668 492 IK 493
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
194-408 |
1.93e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 75.76 E-value: 1.93e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 194 TKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVFLLTRFYP--FLEKTYWFNSVCLGMATLTCFMAGICAMQEYDM 270
Cdd:PRK07691 221 TKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTlfFSHDTSFTHYLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 271 KKIIALSTLSQLGVMMTSLGLG---AAMVAYFHMVTHAMFKALLFICAGnVIHQHGGSQDVRFMGNIWSTLPITSSCLNV 347
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIG-IMIKITGTTDLKKMGGLIKRYPVLGWMFFI 378
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 408772116 348 ANLALCGLPFMAGFYSKDLILEIFFmQSGSFLMLMIIILSTLFTLMYSIRFSFFIIWGEQK 408
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVEGTF-EAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWGEPK 438
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
125-450 |
1.07e-13 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 73.45 E-value: 1.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 125 IVSFVLVIYYQNPSSLAAGMVTALANRVGDVMLILSIAWM------VNQGHWNLIL--MFENPYSGLLTGSILLASMTKS 196
Cdd:PRK12663 142 IASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLygtfgtLNMAHIAMRLndMGDTATLTTIALLFLLAFGMKA 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 197 AQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYP--FLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKII 274
Cdd:PRK12663 222 ALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTllFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIA 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 275 ALSTLSQLGVMMTSLGLGAAMV---AYFHMVTHAMFKALLFICAGNVIHQhGGSQDVRFMGNIWSTLPITSSCLNVANLA 351
Cdd:PRK12663 301 GYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVRL-TGYRSLQYLGGLYRKEPLFGALFLILIFA 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 352 LCGLPFMAGFYSKDLILEIfFMQSGSFLMLMIIILSTLFTLMYSIRFSFFIIWGEQkkcalfsIGDEDKNVRLAQLALST 431
Cdd:PRK12663 380 IGGLPPFSGFWGKVLLVQG-ALDNGAYILLALMLITSLITMYSLFRIFFLAYWGDK-------DGEEVNFKPIPLYRKLP 451
|
330
....*....|....*....
gi 408772116 432 GAVFGGALFSWLLFPFPVM 450
Cdd:PRK12663 452 LSILAVVVIAMGIAAEPLL 470
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
199-397 |
5.09e-13 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 71.39 E-value: 5.09e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 199 IPFSSWLPAAMA-APTPVSALvHSSTLVTAGVFLLTRF-YP-FLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIA 275
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFsLPlFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 276 LSTLSQLGVM------MTSLGLGAAMvayFHMVTHAMFKALLFICAGnVIHQHGGSQDVRFMGNIWSTLPITSSCLNVAN 349
Cdd:PRK05846 307 YSSISHMGFVtlgifaGNQLGIQGAI---FQMISHGLSSAALFLLVG-VLYDRLHTRDIADYGGLAKVMPVLAAFFLFFA 382
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 408772116 350 LALCGLPFMAGFYSKDLILEIFFmqSGSFLMLMIIILSTLFTLMYSIR 397
Cdd:PRK05846 383 MASLGLPGTSGFVGEFLILLGSF--QVNPVIAFIATTGLILAAVYSLW 428
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
199-379 |
7.86e-13 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 71.01 E-value: 7.86e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 199 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVF-LLTRFYPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIAL 276
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLgILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 277 STLSQLGVMMTSLGLGAAMVA--------------YFHMVTHAMFKALLFICAGNVIHQhGGSQDVRFMGNIWSTLPITS 342
Cdd:PRK08042 276 HTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|....*....
gi 408772116 343 SCLNVANLALCGLPFMAGFYSKDLILEIFFM--QSGSFL 379
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFKlsNSGAFV 393
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
56-368 |
1.44e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 69.96 E-value: 1.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 56 LLVDLYGTVFSSTVLLISASVVTFSVNYMSED-------PFSVRFIMVVL-LFILSMNFLVYIPNLMALLLGWDGLGIVS 127
Cdd:PRK06458 65 FFIDDLNVFFLALIGVVGFLTSLYSIGYMRHEvehgelsPVTLRLYYGMYqLFLFTMLLALTSNNLGLMWVAIEATTLSS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 128 FVLVIYYQNPSSLAA----------GMVTALanrVGDVMLILSIAWMVNQGHWNLILMFENPYSGLLTGSIL-LASM--- 193
Cdd:PRK06458 145 ALLVGIYRTRASLEAawkyiiicsvGVAFAL---FGTILVYANAATVMGDGEMAILWTELLKHASLLDPTLMkLAFVfll 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 194 ----TKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVFLLTRFYPFLEK---TYWFNSVCLGMATLTCFMAGICAM 265
Cdd:PRK06458 222 igfgTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAaigSDFPGRLLLIFGLLSVLVAAFFLL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 266 QEYDMKKIIALSTLSQLGVMMTSLGLG---AAMVAYFHMVTHAMFKALLFICAGNVIhQHGGSQDVRFMGNIWSTLPITS 342
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGgplGIFAALLHMLNHSLTKSAIFFASGNVL-QKYGTRDINVIRGLLKVSPLTG 379
|
330 340
....*....|....*....|....*.
gi 408772116 343 SCLNVANLALCGLPFMAGFYSKDLIL 368
Cdd:PRK06458 380 WGLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
188-368 |
2.75e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 69.01 E-value: 2.75e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 188 ILLASMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVFLLTRFYPFLEKTY---WFNSVCLGMATLTCFMAGIC 263
Cdd:PRK08676 212 IFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGaaeQFSNVLIGLGIFSIAVAAFS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 264 AMQEYDMKKIIALSTLSQLGVMMTSLGLG---AAMVAYFHMVTHAMFKALLFICAGnVIHQHGGSQDVRFMGNIWSTLPI 340
Cdd:PRK08676 291 MLSQRNLKKLIAFSSIEHMGLMLLGIGIGtplALFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPV 369
|
170 180
....*....|....*....|....*...
gi 408772116 341 TSSCLNVANLALCGLPFMAGFYSKDLIL 368
Cdd:PRK08676 370 AAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
183-367 |
5.83e-11 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 65.11 E-value: 5.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 183 LLTGSILLASMTKSAQIPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVFLLTRFYPFLEKTYWfNSVCLGMATLTCFMA- 260
Cdd:PRK06473 206 LLLAPILVGFGIKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEAW-VYLAPWLATWAVVSVl 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 261 --GICAMQEYDMKKIIALSTLSQLGVMM------TSLGLGAAMvayFHMVTHAMFKALLFICAGnVIHQHGGSQDV---R 329
Cdd:PRK06473 284 ygASCAIAQKDMKKMVAYSSIGHMGYILlaaaaaTPLSILAAV---FQMISHGLISALLFLLVG-VVYKKTGSRDVdvlR 359
|
170 180 190
....*....|....*....|....*....|....*...
gi 408772116 330 FMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLI 367
Cdd:PRK06473 360 GLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
188-394 |
5.44e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 62.06 E-value: 5.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 188 ILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFY------PFLEKTYWFNSVCLGMATLTCFMAG 261
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGS 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 262 ICAMQEYDMKKIIALSTLSQLGVMMTSLGLG---AAMVAYFHMVTHAMFKALLFICAGNvIHQHGGSQDVRFMGNIWSTL 338
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNtyyGLAAAVAYIVNHSIVKSALFMVSGS-ISYHFGTTKLEDCLNLWKSM 373
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 408772116 339 PITSSCLNVANLALCGLPFMAGFYSKDLILEIfFMQSGSFLMLMIIILSTLFTLMY 394
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYILDA-FIKSNAWIGLVVLLVGSGLSVIY 428
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
56-397 |
1.49e-09 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 60.52 E-value: 1.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 56 LLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVR-FIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLV-IY 133
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 134 YQNPSSLAAGMVTALANRVGDVMLILSIAWMVNQ-GHWNLILMFENPYSGLLTGSILLASMT--------KSAQIPFSSW 204
Cdd:COG1007 146 RDDRRSSEAALKYFLLGALSSGFLLYGISLLYGAtGSLNLAGIAAALAAGGANSPLLLLGLVlvlaglafKLSAVPFHMW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 205 LP-AAMAAPTPVSALVhsSTLV-TAGVFLLTRF--YPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLS 280
Cdd:COG1007 226 TPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLlvEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIA 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 281 QLGVMM------TSLGLGAAMvayFHMVTHAMFKALLFICAGNVIHQHGGSQDVRFMGNIWSTLPITSSCLNVANLALCG 354
Cdd:COG1007 304 HAGYLLlglaagTPLGVSAAL---FYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAG 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 408772116 355 LPFMAGFYSKdliLEIFF--MQSGSFLMLMIIILSTLFTLMYSIR 397
Cdd:COG1007 381 IPPTAGFFGK---FYVFSaaVEAGLYWLAVIAVLNSVISAYYYLR 422
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
67-369 |
7.41e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 58.44 E-value: 7.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 67 STVLLISASVVTFSV----------NYMSEDPFSVrFIMVVLLFI--LSMNFLVyiPNLMALLLGWDGLGIVSFVLVIYY 134
Cdd:PRK12665 78 SALMLVVSSVVLLAVlvyaigqgirDGDEEQPVSI-FLPTYLILVagVSNAFLA--GDLFNLYVGFEILLVASYVLLTLG 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 135 QNPSSLAAGMVTALANRVGDVMLILSIAWM------VNQGHwnLILMFENPYSGL---LTGSILLASMTKSAQIPFSSWL 205
Cdd:PRK12665 155 ATAARVRAGVTYVMVSMVSSLLFLIGIALVyaatgtLNMAD--LAVRLDELPSGTrtaLFAVLLVAFGIKAAVFPLSFWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 206 PAAM-AAPTPVSAlVHSSTLVTAGVFLLTRFYPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGV 284
Cdd:PRK12665 233 PDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGY 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 285 MMTSLGLGAAM---VAYFHMVTHAMFKALLFICAGnVIHQHGGSQDVRFMGNIWSTLPITSSCLNVANLALCGLPFMAGF 361
Cdd:PRK12665 312 MVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGF 390
|
....*...
gi 408772116 362 YSKDLILE 369
Cdd:PRK12665 391 IGKVALLE 398
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
264-393 |
1.64e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 50.80 E-value: 1.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 264 AMQEYDMKKIIALSTLSQLGVMMTSLGLGAAM---VAYFHMVTHAMFKALLFICAGNVIHQHGGSqDVRFMGNIWSTLPI 340
Cdd:PRK06277 284 ALLQTDYKRLLAYHAISQGGYVAAGLALGTPLgivAGIFHAINHVIYKSALFLGAGIVSYRTKTS-NLRKLGGLLPVMPV 362
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 408772116 341 TSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILS--TLFTLM 393
Cdd:PRK06277 363 VAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSigTFVSMM 417
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
55-450 |
2.78e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 49.95 E-value: 2.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 55 NLLVDLYGTVFSSTVLLISASVVTFSVNYMS-EDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIY 133
Cdd:TIGR01770 65 FFIVDNFALLIKLILLLSTLLTFFFALSYLSkEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 134 -YQNPSSLAAGMVTALANRVGDVMLILSIAWM---------VNQGHWNLILMFENPYSGLLTGSILLASMTKSAQIPFSS 203
Cdd:TIGR01770 145 kRKSRFSTEAGLKYFILGAFSSGLLLFGISLIygftgslnfEDLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 204 WLPAAM-AAPTPVSALVHSSTLVTA-GVFLLTRFYPFLEKTYWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQ 281
Cdd:TIGR01770 225 WVPDVYeGAPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 282 LGVMMTSLGLGAAM---VAYFHMVTHAMFKALLFICAGNVIHQHGGSQDVRF-MGNIWSTLPITSSCLNVANLALCGLPF 357
Cdd:TIGR01770 305 VGYILIGLLAGTLEgikAVLFYIFIYALMSLGAFGVLSLLRSYKDEWIEYISdFAGLFKTNPILAILILIFMFSLAGIPP 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 358 MAGFYSKDLILEIFFmQSGSFLMLMIIILSTLFTLMYSIRFSFFIIWGEQKKCALFSIGDEDKNVRLAQLALstgavfgg 437
Cdd:TIGR01770 385 LAGFFGKFYVFFALL-KSGLYWLAVIAVLTSVIGAFYYLRVVKVMYFDKPERRIPSNPQSKAQSLLLSISAL-------- 455
|
410
....*....|...
gi 408772116 438 ALFSWLLFPFPVM 450
Cdd:TIGR01770 456 FILFLGLFPSLIL 468
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
195-409 |
4.92e-06 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 49.23 E-value: 4.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 195 KSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVFLLTRF----YPFLEkTYWFNSVCLgMATLTCFMAGICAMQEYD 269
Cdd:CHL00049 227 KLSLAPFHQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRIfdipFYFSS-NEWHLLLEI-LAILSMILGNLIAITQTS 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 270 MKKIIALSTLSQLGVMMTSLGLGAAMVAYFHMVTHAMFKALLFICAGNVIHQHG---GSQDVRFMGNIWSTLPITSSCLN 346
Cdd:CHL00049 304 MKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGlrtGTDNIRDYAGLYTKDPFLALSLA 383
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 408772116 347 VANLALCGLPFMAGFYSKdliLEIFFM--QSGSFLMLMIIILSTLFTLMYSIRFSFFIIWGEQKK 409
Cdd:CHL00049 384 LCLLSLGGIPPLAGFFGK---LYLFWCgwQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQE 445
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
189-404 |
3.00e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 46.77 E-value: 3.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 189 LLASMTKSAQIPFSSWLPAA-MAAPTPVSALVHSSTLVtaGVFLLTRFYpflekTYWFNS-------------VCLGMAT 254
Cdd:PRK12666 217 LVVFLIKAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLS-----TLLFGPeagasagfgqdwlLPGGLAT 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 255 LTCFMAGICAMQeyDMKKIIALSTLSQLGVMMTSLGLGAAMV---AYFHMVTHAMFKALLFICAGNVIHQHGGSQDVRFM 331
Cdd:PRK12666 290 LAFGAIGVLAAQ--RLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVERQRGAAADRLAV 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 332 G----------------NIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFF---MQSGSFLMLMIIILSTLFTL 392
Cdd:PRK12666 368 TpelydldeeeeeevgvAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLnppGAGAAWWLWALVLLSGLAAL 447
|
250
....*....|..
gi 408772116 393 MYSIRFSFFIIW 404
Cdd:PRK12666 448 IALTRAGIRLFW 459
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
71-375 |
4.63e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 46.32 E-value: 4.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 71 LISASVVTFSVNY-MSEDPFSVRFIMVVLLFILSMNFLVYIPNLMALLLGWDGLGIVSFVLVIYYQNPSSlAAGMVTALA 149
Cdd:PRK06459 51 IISTIVWILASLYsIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR-PAFVFMAFG 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 150 nRVGDVMLILSIAWMVNQGHWNLILMFENPYSGLLTGsilLASMTKSAQIPF--SSWLPAAMA-APTPVSAlVHSSTLVT 226
Cdd:PRK06459 130 -ELSTVLILAGFAWAFIISGTTNFSYLPSPVPLILAS---FGFIIKMGMMPFlvSEWLPIAHGnAPSNFSA-ILSATMTL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 227 AGVFLLTRFYPFLEKT--YWFNSVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLgaAMVAY------ 298
Cdd:PRK06459 205 MGVYGILKMTILTQTIpiGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGL--YMVTKqlitsi 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 299 ---------FHMVTHAMFKALLFICAGNVIHQHGGsqdvrFMGNIWSTLPITSSCLnvANLALCGLPFMAGFYSKDLILE 369
Cdd:PRK06459 283 ehfslitviLYSFAHSVAKTGLFLSSGLQEKQSIT-----YSKKIRNRWIELGLTL--LASSLSGLLPNIGGVASWLLLE 355
|
....*.
gi 408772116 370 IFFMQS 375
Cdd:PRK06459 356 SLFMFA 361
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
162-394 |
1.70e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 44.04 E-value: 1.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 162 AWmvNQGHWNLILMFENPYSGLLTgsilLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLTRFYPFLEK 241
Cdd:MTH00112 78 AW--NTGQWDITQLTNPTSCTLLT----LALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNP 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 242 TywfnsVCLGMATLTCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGLG---AAMVAYFH-MVTHAMFKALLFICAGN 317
Cdd:MTH00112 152 T-----LLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSpklTLLTFYIYiLMTTPMFLTLNTTSTKT 226
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 408772116 318 VihqhggsQDvrfMGNIWSTLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLMLMIIILSTLFTLMY 394
Cdd:MTH00112 227 L-------KD---MMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFY 293
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
183-363 |
2.45e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 43.87 E-value: 2.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 183 LLTGSILLASMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVFLLTRFYPFL--EKTYWFNSVCLGMATLTCFM 259
Cdd:PRK12561 186 LLYAGFLIAFGVKLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVQMlpDAHVYFAPALAILGVVNIIY 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 260 AGICAMQEYDMKKIIALSTLSQLGVMM------TSLGLGAAMvayFHMVTHAMFKALLFICAGnVIHQHGGSQDVRFMGN 333
Cdd:PRK12561 265 GALNAFAQDNVKRRLAYSSVSHMGFVLlgiaafTDLGISGAM---LQMISHGLIAAALFFLTG-VTYERTHTLSIPNMGG 340
|
170 180 190
....*....|....*....|....*....|
gi 408772116 334 IWSTLPITSSCLNVANLALCGLPFMAGFYS 363
Cdd:PRK12561 341 LAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
195-397 |
3.10e-04 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 43.50 E-value: 3.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 195 KSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGV-----FLLTRFYPFLEKTYWFNSVclgMATLTCFMAGICAMQEY 268
Cdd:PRK02504 223 KISAVPFHQWTPDVYeGSPTPVVAFL-SVGSKAAGFalairLLVTAFPSFDEQWKLLFTA---LAILSMVLGNVVALAQT 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 269 DMKKIIALSTLSQLGVMMTSLGLG-----AAMVayFHMVTHAMFKALLFICAGNVIHQHGGSQDVRFMGnIWSTLPITSS 343
Cdd:PRK02504 299 SMKRMLAYSSIGQAGFVMIGLVAGteagyASMV--FYLLAYLFMNLGAFACVILFSLRTGTDQISDYAG-LYQKDPLLTL 375
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 408772116 344 CLNVANLALCGLPFMAGFYSKdliLEIFFM--QSGSFLMLMIIILSTLFTLMYSIR 397
Cdd:PRK02504 376 GLSLCLLSLGGIPPLAGFFGK---IYLFWAgwQAGLYLLVLVGLVTSVISIYYYIR 428
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
180-445 |
2.60e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 40.48 E-value: 2.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 180 YSGLLTGSILLASMTKSAQIPFSSWLPAAMAAPTPVSALVHS--STLVTAGVFLLtrfypflektyWFN--SVCLGMATL 255
Cdd:PRK12664 142 YTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSlfTTKVAALVLLL-----------FFSgeEILLFLGII 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 256 TCFMAGICAMQEYDMKKIIALSTLSQLGVMMTSLGL-----GAAMVAYFHMVTHAMFKALLFICAGNVIHQhGGSQDVRF 330
Cdd:PRK12664 211 TAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFsgssgVAIGILILQIVLSVVYQTLLFMVADSVINR-TRKFNLNR 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 408772116 331 MGNIWStLPITSSCLNVANLALCGLPFMAGFYSKDLILEIFFMQSGSFLML--MIIILSTLFTLMYSIRFSFFIIWGEQK 408
Cdd:PRK12664 290 VGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYkkLFLICSLLLFASVGLKFFWYAFISKSK 368
|
250 260 270
....*....|....*....|....*....|....*..
gi 408772116 409 KCALFSIGDEDKNVRLAQLALStgAVFGGALFSWLLF 445
Cdd:PRK12664 369 SKPEAEKVYIGSKLSMIILVLI--CVVLGMFNSYLLF 403
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
45-93 |
2.72e-03 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 35.87 E-value: 2.72e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 408772116 45 ITLGSSKLEFNLLVDLYGTVFSSTVLLISASVVTFSVNYMSEDPFSVRF 93
Cdd:pfam00662 2 LSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| |
