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Conserved domains on  [gi|40288431|gb|AAR84240|]
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tumor necrosis factor receptor superfamily, member 17 [Homo sapiens]

Protein Classification

tumor necrosis factor receptor family protein( domain architecture ID 10194108)

tumor necrosis factor receptor (TNFR) family protein may interact with TNF superfamily (TNFSF) ligands (TNFL) to control key cellular processes such as differentiation, proliferation, apoptosis, and cell growth; similar to Rattus norvegicus tumor necrosis factor receptor superfamily member 8

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
TNFRSF17 cd13414
Tumor necrosis factor receptor superfamily member 17 (TNFRSF17), also known as B cell ...
4-166 3.59e-102

Tumor necrosis factor receptor superfamily member 17 (TNFRSF17), also known as B cell maturation antigen (BCMA), as well as TNFRSF13A; TNFRSF17 (also known as TNFRSF13A, B cell maturation antigen or BCMA, CD269) is predominantly expressed on terminally differentiated B cells, including multiple myeloma cells, and is important for B cell development and autoimmune response. Upon binding to its ligands, B cell activator of the TNF family (BAFF, also known as TNSF13B, TALL-1, BLyS, zTNF4), and a proliferation inducing ligand (APRIL), BCMA activates NF-kappaB and MAPK8/JNK; it has a higher affinity for APRIL than for BAFF. This receptor may transduce signals for cell survival and proliferation by binding to TRAF1, TRAF2, and TRAF3. BCMA expression has also been linked to a number of cancers, autoimmune disorders, and infectious diseases. It has been shown that although BCMA does not play a role in normal B cell homeostasis, it is critical for the long-term survival of bone marrow plasma cells. BCMA is expressed in a number of hematologic malignancies, including both Hodgkin's and non-Hodgkin's lymphomas, as well as primary tumor cells and cell lines of multiple myeloma, playing a critical role in protecting myeloma cells from apoptosis. BCMA has been identified as a promising chimeric antigen receptor (CAR) target for multiple myeloma; CARs are synthetic transmembrane proteins used to redirect autologous T cells with a new specificity for antigens on the surface of cancer cells. BCMA may also be implicated in the context of both viral and fungal infections; peripheral blood B cells isolated from HIV+ viremic patients have increased expression levels of BCMA, and significant decreased levels are found during fungal infection with C. neoformans. BCMA has been linked to mucosal immunity; its signaling in B cells and non-B cells is important for driving protective IgA responses. Also, abnormal expression or signaling of BCMA in the gut may be relevant to diseases, such as irritable bowel disease and ulcerative colitis.


:

Pssm-ID: 276919  Cd Length: 165  Bit Score: 290.85  E-value: 3.59e-102
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40288431   4 MAGQCSQNEYFDSLLHACIPCQLRCSsNTPPLTCQRYCNASVTNSVKGTNAILWTCLGLSLIISLAVFVLMFLLRKISSE 83
Cdd:cd13414   1 MAQQCFQNEYFDSLLHACKPCHLRCS-NTPPLPCQSYCNASVTNSVKGTNVILWICLGLSLILSLTVFLLMFLLRKMSSE 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40288431  84 PLKDEFKNTGSGLLGMAN--IDLEKSRTGDEIILPRGL-EYTVEECTCEDCIKSKPKVDSDHCFPLPAMEEGATILVTTK 160
Cdd:cd13414  80 PSKDELKNTGITLQNKANalADLSESRIGEEILLPRSLlEYTVEECTCEDCVKSKPKADSDHFFPLPAMEEGATILVTTK 159

                ....*.
gi 40288431 161 TNDYCK 166
Cdd:cd13414 160 TNDYCK 165
 
Name Accession Description Interval E-value
TNFRSF17 cd13414
Tumor necrosis factor receptor superfamily member 17 (TNFRSF17), also known as B cell ...
4-166 3.59e-102

Tumor necrosis factor receptor superfamily member 17 (TNFRSF17), also known as B cell maturation antigen (BCMA), as well as TNFRSF13A; TNFRSF17 (also known as TNFRSF13A, B cell maturation antigen or BCMA, CD269) is predominantly expressed on terminally differentiated B cells, including multiple myeloma cells, and is important for B cell development and autoimmune response. Upon binding to its ligands, B cell activator of the TNF family (BAFF, also known as TNSF13B, TALL-1, BLyS, zTNF4), and a proliferation inducing ligand (APRIL), BCMA activates NF-kappaB and MAPK8/JNK; it has a higher affinity for APRIL than for BAFF. This receptor may transduce signals for cell survival and proliferation by binding to TRAF1, TRAF2, and TRAF3. BCMA expression has also been linked to a number of cancers, autoimmune disorders, and infectious diseases. It has been shown that although BCMA does not play a role in normal B cell homeostasis, it is critical for the long-term survival of bone marrow plasma cells. BCMA is expressed in a number of hematologic malignancies, including both Hodgkin's and non-Hodgkin's lymphomas, as well as primary tumor cells and cell lines of multiple myeloma, playing a critical role in protecting myeloma cells from apoptosis. BCMA has been identified as a promising chimeric antigen receptor (CAR) target for multiple myeloma; CARs are synthetic transmembrane proteins used to redirect autologous T cells with a new specificity for antigens on the surface of cancer cells. BCMA may also be implicated in the context of both viral and fungal infections; peripheral blood B cells isolated from HIV+ viremic patients have increased expression levels of BCMA, and significant decreased levels are found during fungal infection with C. neoformans. BCMA has been linked to mucosal immunity; its signaling in B cells and non-B cells is important for driving protective IgA responses. Also, abnormal expression or signaling of BCMA in the gut may be relevant to diseases, such as irritable bowel disease and ulcerative colitis.


Pssm-ID: 276919  Cd Length: 165  Bit Score: 290.85  E-value: 3.59e-102
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40288431   4 MAGQCSQNEYFDSLLHACIPCQLRCSsNTPPLTCQRYCNASVTNSVKGTNAILWTCLGLSLIISLAVFVLMFLLRKISSE 83
Cdd:cd13414   1 MAQQCFQNEYFDSLLHACKPCHLRCS-NTPPLPCQSYCNASVTNSVKGTNVILWICLGLSLILSLTVFLLMFLLRKMSSE 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40288431  84 PLKDEFKNTGSGLLGMAN--IDLEKSRTGDEIILPRGL-EYTVEECTCEDCIKSKPKVDSDHCFPLPAMEEGATILVTTK 160
Cdd:cd13414  80 PSKDELKNTGITLQNKANalADLSESRIGEEILLPRSLlEYTVEECTCEDCVKSKPKADSDHFFPLPAMEEGATILVTTK 159

                ....*.
gi 40288431 161 TNDYCK 166
Cdd:cd13414 160 TNDYCK 165
BCMA-Tall_bind pfam09257
BCMA, TALL-1 binding; Members of this family, which are predominantly found in the tumour ...
8-45 3.08e-16

BCMA, TALL-1 binding; Members of this family, which are predominantly found in the tumour necrosis factor receptor superfamily member 17, BCMA, are required for binding to tumour necrosis factor ligand TALL-1.


Pssm-ID: 462727  Cd Length: 37  Bit Score: 68.66  E-value: 3.08e-16
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 40288431     8 CSQNEYFDSLLHACIPCQLRCsSNTPPLTCQRYCNASV 45
Cdd:pfam09257   1 CSQNEYFDSLLHACKPCHLRC-SNTPPLTCQRYCDASV 37
 
Name Accession Description Interval E-value
TNFRSF17 cd13414
Tumor necrosis factor receptor superfamily member 17 (TNFRSF17), also known as B cell ...
4-166 3.59e-102

Tumor necrosis factor receptor superfamily member 17 (TNFRSF17), also known as B cell maturation antigen (BCMA), as well as TNFRSF13A; TNFRSF17 (also known as TNFRSF13A, B cell maturation antigen or BCMA, CD269) is predominantly expressed on terminally differentiated B cells, including multiple myeloma cells, and is important for B cell development and autoimmune response. Upon binding to its ligands, B cell activator of the TNF family (BAFF, also known as TNSF13B, TALL-1, BLyS, zTNF4), and a proliferation inducing ligand (APRIL), BCMA activates NF-kappaB and MAPK8/JNK; it has a higher affinity for APRIL than for BAFF. This receptor may transduce signals for cell survival and proliferation by binding to TRAF1, TRAF2, and TRAF3. BCMA expression has also been linked to a number of cancers, autoimmune disorders, and infectious diseases. It has been shown that although BCMA does not play a role in normal B cell homeostasis, it is critical for the long-term survival of bone marrow plasma cells. BCMA is expressed in a number of hematologic malignancies, including both Hodgkin's and non-Hodgkin's lymphomas, as well as primary tumor cells and cell lines of multiple myeloma, playing a critical role in protecting myeloma cells from apoptosis. BCMA has been identified as a promising chimeric antigen receptor (CAR) target for multiple myeloma; CARs are synthetic transmembrane proteins used to redirect autologous T cells with a new specificity for antigens on the surface of cancer cells. BCMA may also be implicated in the context of both viral and fungal infections; peripheral blood B cells isolated from HIV+ viremic patients have increased expression levels of BCMA, and significant decreased levels are found during fungal infection with C. neoformans. BCMA has been linked to mucosal immunity; its signaling in B cells and non-B cells is important for driving protective IgA responses. Also, abnormal expression or signaling of BCMA in the gut may be relevant to diseases, such as irritable bowel disease and ulcerative colitis.


Pssm-ID: 276919  Cd Length: 165  Bit Score: 290.85  E-value: 3.59e-102
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40288431   4 MAGQCSQNEYFDSLLHACIPCQLRCSsNTPPLTCQRYCNASVTNSVKGTNAILWTCLGLSLIISLAVFVLMFLLRKISSE 83
Cdd:cd13414   1 MAQQCFQNEYFDSLLHACKPCHLRCS-NTPPLPCQSYCNASVTNSVKGTNVILWICLGLSLILSLTVFLLMFLLRKMSSE 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40288431  84 PLKDEFKNTGSGLLGMAN--IDLEKSRTGDEIILPRGL-EYTVEECTCEDCIKSKPKVDSDHCFPLPAMEEGATILVTTK 160
Cdd:cd13414  80 PSKDELKNTGITLQNKANalADLSESRIGEEILLPRSLlEYTVEECTCEDCVKSKPKADSDHFFPLPAMEEGATILVTTK 159

                ....*.
gi 40288431 161 TNDYCK 166
Cdd:cd13414 160 TNDYCK 165
BCMA-Tall_bind pfam09257
BCMA, TALL-1 binding; Members of this family, which are predominantly found in the tumour ...
8-45 3.08e-16

BCMA, TALL-1 binding; Members of this family, which are predominantly found in the tumour necrosis factor receptor superfamily member 17, BCMA, are required for binding to tumour necrosis factor ligand TALL-1.


Pssm-ID: 462727  Cd Length: 37  Bit Score: 68.66  E-value: 3.08e-16
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 40288431     8 CSQNEYFDSLLHACIPCQLRCsSNTPPLTCQRYCNASV 45
Cdd:pfam09257   1 CSQNEYFDSLLHACKPCHLRC-SNTPPLTCQRYCDASV 37
TNFRSF13B cd13415
Tumor necrosis factor receptor superfamily member 13B (TNFRSF13B), also known as transmembrane ...
8-51 1.83e-03

Tumor necrosis factor receptor superfamily member 13B (TNFRSF13B), also known as transmembrane activator and calcium modulator and cyclophilin ligand interactor (TACI); TNFRSF13B (also known as transmembrane activator and calcium modulator and cyclophilin ligand interactor (TACI), CVID, RYZN, CD267, CVID2, TNFRSF14B) is mainly expressed on B cells and binds strongly to B cell activating factor (BAFF) and weakly to a proliferation-inducing ligand (APRIL). TACI-APRIL interactions induce B-cell differentiation, whereas TACI-BAFF ligation negatively regulates B-cell functions. In humans, TACI is expressed on memory B cells and TACI mutations are detected in 8-10% of common variable immunodeficiency (CVID) patients, making it the most frequently mutated gene for the disease. Coexisting morbidities in CVID include bronchiectasis, autoimmunity, and malignancies. However, TNFRSF13B/TACI defects alone do not result in CVID but may also be found frequently in distinct clinical phenotypes, including benign lymphoproliferation and IgG subclass deficiencies. Over-expression of TACI has been detected in multiple myeloma and thyroid carcinoma; correlative analyses suggest that TACI expression is a useful prognostic marker for lymphoma.


Pssm-ID: 276920  Cd Length: 212  Bit Score: 37.83  E-value: 1.83e-03
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....
gi 40288431   8 CSQNEYFDSLLHACIPCQLRCSSNTPPlTCQRYCNASVTNSVKG 51
Cdd:cd13415   1 CPDEQYWDSLVGQCISCSLICSRRSVR-TCAAFCKSMSCNKEQG 43
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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