|
Name |
Accession |
Description |
Interval |
E-value |
| RPN2 |
COG5116 |
26S proteasome regulatory complex component [Posttranslational modification, protein turnover, ... |
2-797 |
0e+00 |
|
26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 227446 [Multi-domain] Cd Length: 926 Bit Score: 814.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAALVASKVFYHLGAFEESLNYA 81
Cdd:COG5116 3 MTTARILPALLAELRDGRESEALDVINAHVDQLWPEISDDLRYIEALYDDDSFDPREMAALCLSKVYYVLGEYQQAIEYA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 82 LGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVEnADLpEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLD 161
Cdd:COG5116 83 LRAGDRFLVDDGSFYYETIVYKSIEMYVHMMDS-AYI-GGDKDIIDRILDFVLEVIGAKCVDDSEIGYLLGIAAEGLRLD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 162 VFEKTILESNDVpGMLAYSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDN 241
Cdd:COG5116 161 IIEKYLSDGNDC-DIINYLLDLAITLVEEEGFRKEILRMLAEIGPGKPKPDYFYVIKAVVYLNDAEKAKALIEKLVKEND 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 242 LLMAYQICFDLYESASQQFLSSVIqnlrtvgtpiasvpgstnTGTVPGSEKDsdsmeteektssafvgktpeaspepkdq 321
Cdd:COG5116 240 LLLYAQVAFDLEDSASQEILEILV------------------TELVAQGYDQ---------------------------- 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 322 tlKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNW 399
Cdd:COG5116 274 --AVMSILSGEFTKKYLGAFLLEKNNTDFKFLNSSKSSLarKFSRFHYAVSLANSFMNLGTSNDSFYRNNLDWLGKASNW 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 400 AKFTATASLGVIHKGHEKEALQLMATYLPKDTSpGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASN---DIVRHG 476
Cdd:COG5116 352 AKFTATASLGVIHLGNSNPGYEILKPYLPSEVA-SSRQKEGGALYALGLIKAGFGREDTEYLLEYFLDTEDeltPELAYG 430
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 477 GSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVM 556
Cdd:COG5116 431 VCLGIGLINMGSANREIYEKLKELLKNDRALLGEAAVYGMGLLMLGTWSVEAIEDMRTYAGETQHERIKRGLGIGFALIL 510
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 557 YGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSV 636
Cdd:COG5116 511 YGRQEMADDYINELLYDKDSILRYNGVFSLALAYVGTGNLGVVSTLLHYAVSDGNDDVRRAAVIALGFVCCDDRDLLVGT 590
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 637 VSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKV 716
Cdd:COG5116 591 VELLSESHNFHVRAGVAVALGIACAGTGDKVATDILEALMYDTNDFVRQSAMIAVGMILMQCNPELNPNVKRIIKKFNRV 670
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 717 INDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLK 796
Cdd:COG5116 671 IVDKHESGLAKLGAVLAQGISEAGGRNVTISLRNATGILSADRIVGLVLFLQYWYWFPLIHFVSLSFLPTTVIGIRGSQA 750
|
.
gi 39963586 797 V 797
Cdd:COG5116 751 I 751
|
|
| RPN1 |
COG5110 |
26S proteasome regulatory complex component [Posttranslational modification, protein turnover, ... |
373-801 |
1.99e-25 |
|
26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 227441 [Multi-domain] Cd Length: 881 Bit Score: 113.10 E-value: 1.99e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 373 NSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSpgsaYQEGGGLYALGLIH-A 451
Cdd:COG5110 368 NDPINLGYENDSLIPLDDEWIYKCKVPGLISAFASIGVIESWNSDKGLETLDKYLYADES----YRKAGALLGIGLSGlR 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 452 NHG-GDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEA--AGLALGLVMLGSKNAQA 528
Cdd:COG5110 444 VFEeRPPALALLSNYLQSSSSKHVIAAILGLGAAFSGTQAEEVLELLQPIMFSTDSPIEVVffASLTLGSVFVGTCNGDL 523
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 529 IEDMV-------GYAQETQhekILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRR 601
Cdd:COG5110 524 TSLILqtfvergKIESETQ---WFRFLALGLASLFYGRKDQVDDVEETIMAIEGALSKHEEILVKGCQYVGTGDVLVIQS 600
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 602 LLHVAVSDVNDDVRR--AAVES---LGFILFRTPEQCPSVVSLLSESY-----NPHVRYGAAMALGICCAGTGNKEAINL 671
Cdd:COG5110 601 LLHVKDEFTGDTLKNeeALIESlalLGCALIAMGEDIGSEMVLRHFSHsmhygSSHIRSVLPLAYGILSPSNPQMNVFDT 680
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 672 LEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVnqFRQLYSKVindkHDDVMAKFGAILAQGILDAGGHNVTISLQSR 751
Cdd:COG5110 681 LERSSHDGDLNVIINTIFAMGLIGAGTLNARLAQL--LRQLASYY----YKESKALFVLRIAQGLLSLGKGTMTISPLYF 754
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 39963586 752 TGHTHMPSVVGVLVFTQFWFW----FPL--SH----FLSLAYTPTCVIGLNKD---LKVSTAV 801
Cdd:COG5110 755 DKTTLMPKNTAGLFTTVFMLLdssiFPLvsSHalmyFLLCQIRPQKYVTLSEKgepIKVNVRV 817
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
599-690 |
1.34e-12 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 63.90 E-value: 1.34e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 599 IRRLLHVAVSDVNDDVRRAAVESLGfiLFRTPEQCPSVVSLLSESyNPHVRYGAAMALGIccagTGNKEAINLLEPM-TN 677
Cdd:pfam13646 1 LPALLQALLRDPDPEVRAAAIRALG--RIGDPEAVPALLELLKDE-DPAVRRAAAEALGK----IGDPEALPALLELlRD 73
|
90
....*....|...
gi 39963586 678 DPVNYVRQGALIA 690
Cdd:pfam13646 74 DDDDVVRAAAAEA 86
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
545-690 |
3.14e-12 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 64.65 E-value: 3.14e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 545 LRGLAVGiALVMYGRMEEADALIESLcRDKDPILRRSGMYTVAMAycgsGNNKAIRRLLHvAVSDVNDDVRRAAVESLGF 624
Cdd:COG1413 1 VRRAAAR-ALGRLGDPAAVPALIAAL-ADEDPDVRAAAARALGRL----GDPRAVPALLE-ALKDPDPEVRAAAAEALGR 73
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 39963586 625 IlfRTPEQCPSVVSLLSESyNPHVRYGAAMALGiccaGTGNKEAINLLEPMTNDPVNYVRQGALIA 690
Cdd:COG1413 74 I--GDPEAVPALIAALKDE-DPEVRRAAAEALG----RLGDPAAVPALLEALKDPDWEVRRAAARA 132
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
510-657 |
1.60e-10 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 59.64 E-value: 1.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 510 EAAGLALGLVmlgsKNAQAIEDMVGYAQETQHEkiLRGLAVgIALVMYGRMEEADALIESLcRDKDPILRRSgmytVAMA 589
Cdd:COG1413 3 RAAARALGRL----GDPAAVPALIAALADEDPD--VRAAAA-RALGRLGDPRAVPALLEAL-KDPDPEVRAA----AAEA 70
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 39963586 590 YCGSGNNKAIRRLLHvAVSDVNDDVRRAAVESLGFIlfRTPEQCPSVVSLLSESyNPHVRYGAAMALG 657
Cdd:COG1413 71 LGRIGDPEAVPALIA-ALKDEDPEVRRAAAEALGRL--GDPAAVPALLEALKDP-DWEVRRAAARALG 134
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
563-657 |
2.97e-10 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 57.35 E-value: 2.97e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 563 ADALIESLCRDKDPILRRsgmyTVAMAyCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFIlfRTPEQCPSVVSLLSE 642
Cdd:pfam13646 1 LPALLQALLRDPDPEVRA----AAIRA-LGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKI--GDPEALPALLELLRD 73
|
90
....*....|....*
gi 39963586 643 SYNPHVRYGAAMALG 657
Cdd:pfam13646 74 DDDDVVRAAAAEALA 88
|
|
| PC_rep |
pfam01851 |
Proteasome/cyclosome repeat; |
651-685 |
8.34e-07 |
|
Proteasome/cyclosome repeat;
Pssm-ID: 460361 [Multi-domain] Cd Length: 35 Bit Score: 45.87 E-value: 8.34e-07
10 20 30
....*....|....*....|....*....|....*
gi 39963586 651 GAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQ 685
Cdd:pfam01851 1 GAALALGLIHAGSGNEEALDLLLPYLSDTSAESRA 35
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
614-694 |
9.30e-06 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 46.16 E-value: 9.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39963586 614 VRRAAVESLGFIlfRTPEQCPSVVSLLSESyNPHVRYGAAMALGiccaGTGNKEAINLLEPMTNDPVNYVRQGALIASAL 693
Cdd:COG1413 1 VRRAAARALGRL--GDPAAVPALIAALADE-DPDVRAAAARALG----RLGDPRAVPALLEALKDPDPEVRAAAAEALGR 73
|
.
gi 39963586 694 I 694
Cdd:COG1413 74 I 74
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
545-623 |
1.78e-04 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 41.17 E-value: 1.78e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 39963586 545 LRGLAVgIALVMYGRMEEADALIEsLCRDKDPILRRsgmyTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLG 623
Cdd:pfam13646 16 VRAAAI-RALGRIGDPEAVPALLE-LLKDEDPAVRR----AAAEALGKIGDPEALPALLELLRDDDDDVVRAAAAEALA 88
|
|
| PC_rep |
pfam01851 |
Proteasome/cyclosome repeat; |
511-544 |
2.07e-04 |
|
Proteasome/cyclosome repeat;
Pssm-ID: 460361 [Multi-domain] Cd Length: 35 Bit Score: 39.33 E-value: 2.07e-04
10 20 30
....*....|....*....|....*....|....
gi 39963586 511 AAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKI 544
Cdd:pfam01851 1 GAALALGLIHAGSGNEEALDLLLPYLSDTSAESR 34
|
|
| PC_rep |
pfam01851 |
Proteasome/cyclosome repeat; |
476-510 |
8.79e-04 |
|
Proteasome/cyclosome repeat;
Pssm-ID: 460361 [Multi-domain] Cd Length: 35 Bit Score: 37.40 E-value: 8.79e-04
10 20 30
....*....|....*....|....*....|....*
gi 39963586 476 GGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGE 510
Cdd:pfam01851 1 GAALALGLIHAGSGNEEALDLLLPYLSDTSAESRA 35
|
|
| PC_rep |
pfam01851 |
Proteasome/cyclosome repeat; |
441-474 |
9.14e-04 |
|
Proteasome/cyclosome repeat;
Pssm-ID: 460361 [Multi-domain] Cd Length: 35 Bit Score: 37.40 E-value: 9.14e-04
10 20 30
....*....|....*....|....*....|....*
gi 39963586 441 GGLYALGLIHANHG-GDIIDYLLNQLKNASNDIVR 474
Cdd:pfam01851 1 GAALALGLIHAGSGnEEALDLLLPYLSDTSAESRA 35
|
|
| HEAT_EZ |
pfam13513 |
HEAT-like repeat; The HEAT repeat family is related to armadillo/beta-catenin-like repeats ... |
646-690 |
2.00e-03 |
|
HEAT-like repeat; The HEAT repeat family is related to armadillo/beta-catenin-like repeats (see pfam00514). These EZ repeats are found in subunits of cyanobacterial phycocyanin lyase and other proteins and probably carry out a scaffolding role.
Pssm-ID: 463906 [Multi-domain] Cd Length: 55 Bit Score: 36.96 E-value: 2.00e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 39963586 646 PHVRYGAAMALGICCAGTGN------KEAINLLEPMTNDPVNYVRQGALIA 690
Cdd:pfam13513 1 WRVREAAALALGSLAEGGPDllapavPELLPALLPLLNDDSDLVREAAAWA 51
|
|
|