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Conserved domains on  [gi|394256713|gb|EJE01640|]
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arsenate reductase (thioredoxin) [Staphylococcus epidermidis NIHLM040]

Protein Classification

low molecular weight phosphatase family protein( domain architecture ID 435)

low molecular weight phosphatase (LMWP) family protein similar to arsenate reductase that plays an important role in the reduction of intracellular arsenate to arsenite, an important step in arsenic detoxification

CATH:  3.40.50.2300
SCOP:  4000436

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
LMWP super family cl00105
Low molecular weight phosphatase family; Low molecular weight phosphatases (LMWPs) are a group ...
1-131 3.41e-95

Low molecular weight phosphatase family; Low molecular weight phosphatases (LMWPs) are a group of small soluble enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). This family includes protein tyrosine phosphatases, arginine phosphatases and arsenate reductases.


The actual alignment was detected with superfamily member PRK13530:

Pssm-ID: 469616  Cd Length: 133  Bit Score: 269.69  E-value: 3.41e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713   1 MKRKTIYFICTGNSCRSQMAEGFGKLILGDKWNVYSAGIETHGVNPHAIKAMKEVGIDISHHTSDLINNDILIESDIVVT 80
Cdd:PRK13530   1 MNKKTIYFLCTGNSCRSQMAEGWGKQYLGDKWNVYSAGIEAHGVNPNAIKAMKEVGIDISNQTSDIIDNDILNNADLVVT 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 394256713  81 LCSDADANCPVLPKNVTKEHWGFDDPAGKDWAEFQRVRDEIKTAIETFAHR 131
Cdd:PRK13530  81 LCSHADDVCPSTPPHVKRVHWGFDDPAGKEWSEFQRVRDEIGERIKRFAET 131
 
Name Accession Description Interval E-value
PRK13530 PRK13530
arsenate reductase (thioredoxin);
1-131 3.41e-95

arsenate reductase (thioredoxin);


Pssm-ID: 237415  Cd Length: 133  Bit Score: 269.69  E-value: 3.41e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713   1 MKRKTIYFICTGNSCRSQMAEGFGKLILGDKWNVYSAGIETHGVNPHAIKAMKEVGIDISHHTSDLINNDILIESDIVVT 80
Cdd:PRK13530   1 MNKKTIYFLCTGNSCRSQMAEGWGKQYLGDKWNVYSAGIEAHGVNPNAIKAMKEVGIDISNQTSDIIDNDILNNADLVVT 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 394256713  81 LCSDADANCPVLPKNVTKEHWGFDDPAGKDWAEFQRVRDEIKTAIETFAHR 131
Cdd:PRK13530  81 LCSHADDVCPSTPPHVKRVHWGFDDPAGKEWSEFQRVRDEIGERIKRFAET 131
arsC_pI258_fam TIGR02691
arsenate reductase (thioredoxin); This family describes the well-studied thioredoxin-dependent ...
6-128 3.75e-79

arsenate reductase (thioredoxin); This family describes the well-studied thioredoxin-dependent arsenate reductase of Staphylococcus aureaus plasmid pI258 and other mechanistically similar arsenate reductases. The mechanism involves an intramolecular disulfide bond cascade, and aligned members of this family have four absolutely conserved Cys residues. This group of arsenate reductases belongs to the low-molecular weight protein-tyrosine phosphatase family (pfam01451), as does a group of glutathione/glutaredoxin type arsenate reductases (TIGR02689). At least two other, non-homologous groups of arsenate reductases involved in arsenical resistance are also known. This enzyme reduces arsenate to arsenite, which may be more toxic but which is more easily exported. [Cellular processes, Detoxification]


Pssm-ID: 131738  Cd Length: 129  Bit Score: 229.28  E-value: 3.75e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713    6 IYFICTGNSCRSQMAEGFGKLILGDKWNVYSAGIETHGVNPHAIKAMKEVGIDISHHTSDLINNDILIESDIVVTLCSDA 85
Cdd:TIGR02691   1 IYFLCTGNSCRSQMAEGWGKKYLGDEWEVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDLIDLDILNKADLVVTLCGDA 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 394256713   86 DANCPVLPKNVTKEHWGFDDPAGKD------WAEFQRVRDEIKTAIETF 128
Cdd:TIGR02691  81 RDKCPATPPHVKREHWGLDDPARAEgteeekWAVFRRVRDEIKERVKDF 129
LMWP_ArsC cd16345
Arsenate reductase of the LMWP family; Arsenate reductase plays an important role in the ...
6-128 4.13e-69

Arsenate reductase of the LMWP family; Arsenate reductase plays an important role in the reduction of intracellular arsenate to arsenite, an important step in arsenic detoxification. The reduction involves three different thiolate nucleophiles. In arsenate reductases of the LMWP family, reduction can be coupled with thioredoxin (Trx)/thioredoxin reductase (TrxR) or glutathione (GSH)/glutaredoxin (Grx).


Pssm-ID: 319973  Cd Length: 132  Bit Score: 203.83  E-value: 4.13e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713   6 IYFICTGNSCRSQMAEGFGKLILGDKWNVYSAGIETHGVNPHAIKAMKEVGIDISHHTSDLINNDILIESDIVVTLCSDA 85
Cdd:cd16345    2 VLFLCTGNSARSQMAEALLRHLGGDRFEAYSAGSEPAGVNPLAIEVMKEIGIDISGQRSKSLDEFLGQEFDYVITVCDNA 81
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 394256713  86 DANCPVLPKNVTKEHWGFDDPAGKD------WAEFQRVRDEIKTAIETF 128
Cdd:cd16345   82 AEVCPVFPGAVKRLHWGFPDPAAAEgseeekLEAFRRVRDEIKERIEAL 130
Wzb COG0394
Protein-tyrosine-phosphatase [Signal transduction mechanisms];
1-131 1.58e-53

Protein-tyrosine-phosphatase [Signal transduction mechanisms];


Pssm-ID: 440163  Cd Length: 137  Bit Score: 164.56  E-value: 1.58e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713   1 MKRKTIYFICTGNSCRSQMAEGFGKLILGDKWNVYSAGIETHG-VNPHAIKAMKEVGIDISHHTSDLINNDILIESDIVV 79
Cdd:COG0394    1 MMPKRVLFVCTGNICRSPMAEALLRHLAGGRVEVDSAGTEPGGpVDPRAVAVLAERGIDLSGHRSRQLDEEDLPEFDLVI 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 394256713  80 TLCSDADAN-CPVLPKNV-TKEHWGFDDPAGKDWAEFQRVRDEIKTAIETFAHR 131
Cdd:COG0394   81 TMCDSAAEElCPLFPGAAkLLLHWDVPDPYYGGLEAFREVRDEIERRIEALLAK 134
LMWPc smart00226
Low molecular weight phosphatase family;
6-129 2.96e-41

Low molecular weight phosphatase family;


Pssm-ID: 197586  Cd Length: 134  Bit Score: 133.37  E-value: 2.96e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713     6 IYFICTGNSCRSQMAEGFGKLILGDKWNVYSAGIET---HGVNPHAIKAMKEVGIDISHHTSDlINNDILIESDIVVTLC 82
Cdd:smart00226   1 ILFVCTGNICRSPMAEALFKAYVGDRVKIDSAGTGAwvgGGADPRAVKVLKEHGIDLSHHASQ-LTSSDFKNADLVLAMD 79
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 394256713    83 SDADAN-CPVLPKNVTK-EHWG----FDDPAGKDWAEFQRVRDEIKTAIETFA 129
Cdd:smart00226  80 GSHLRNiCRLKPPSRAKvELFGhyvdVDDPYYGGIDGFERVYDELENALQEFL 132
LMWPc pfam01451
Low molecular weight phosphotyrosine protein phosphatase;
6-129 1.50e-29

Low molecular weight phosphotyrosine protein phosphatase;


Pssm-ID: 460216  Cd Length: 142  Bit Score: 103.99  E-value: 1.50e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713    6 IYFICTGNSCRSQMAEGF-----GKLILGDKWNVYSAGIET---HGVNPHAIKAMKEVGIDISHHTSDLINNDILIESDI 77
Cdd:pfam01451   1 ILFVCTGNICRSPMAEAIfrrelEKAGLGDKVEVDSAGTGAwpgNPADPRAVEVLKEHGIDLSGHYARQLSTEDFASFDL 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 394256713   78 VVTLCSDADAN-CPVLPKNVT---------KEHWGFDDPAGKDWAEFQRVRDEIKTAIETFA 129
Cdd:pfam01451  81 ILAMDSEHKRDlCPLAPERYRakvmllgeyGEQLDIPDPYYGSIDAFEEVRDLIERRCRQLL 142
 
Name Accession Description Interval E-value
PRK13530 PRK13530
arsenate reductase (thioredoxin);
1-131 3.41e-95

arsenate reductase (thioredoxin);


Pssm-ID: 237415  Cd Length: 133  Bit Score: 269.69  E-value: 3.41e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713   1 MKRKTIYFICTGNSCRSQMAEGFGKLILGDKWNVYSAGIETHGVNPHAIKAMKEVGIDISHHTSDLINNDILIESDIVVT 80
Cdd:PRK13530   1 MNKKTIYFLCTGNSCRSQMAEGWGKQYLGDKWNVYSAGIEAHGVNPNAIKAMKEVGIDISNQTSDIIDNDILNNADLVVT 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 394256713  81 LCSDADANCPVLPKNVTKEHWGFDDPAGKDWAEFQRVRDEIKTAIETFAHR 131
Cdd:PRK13530  81 LCSHADDVCPSTPPHVKRVHWGFDDPAGKEWSEFQRVRDEIGERIKRFAET 131
arsC_pI258_fam TIGR02691
arsenate reductase (thioredoxin); This family describes the well-studied thioredoxin-dependent ...
6-128 3.75e-79

arsenate reductase (thioredoxin); This family describes the well-studied thioredoxin-dependent arsenate reductase of Staphylococcus aureaus plasmid pI258 and other mechanistically similar arsenate reductases. The mechanism involves an intramolecular disulfide bond cascade, and aligned members of this family have four absolutely conserved Cys residues. This group of arsenate reductases belongs to the low-molecular weight protein-tyrosine phosphatase family (pfam01451), as does a group of glutathione/glutaredoxin type arsenate reductases (TIGR02689). At least two other, non-homologous groups of arsenate reductases involved in arsenical resistance are also known. This enzyme reduces arsenate to arsenite, which may be more toxic but which is more easily exported. [Cellular processes, Detoxification]


Pssm-ID: 131738  Cd Length: 129  Bit Score: 229.28  E-value: 3.75e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713    6 IYFICTGNSCRSQMAEGFGKLILGDKWNVYSAGIETHGVNPHAIKAMKEVGIDISHHTSDLINNDILIESDIVVTLCSDA 85
Cdd:TIGR02691   1 IYFLCTGNSCRSQMAEGWGKKYLGDEWEVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDLIDLDILNKADLVVTLCGDA 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 394256713   86 DANCPVLPKNVTKEHWGFDDPAGKD------WAEFQRVRDEIKTAIETF 128
Cdd:TIGR02691  81 RDKCPATPPHVKREHWGLDDPARAEgteeekWAVFRRVRDEIKERVKDF 129
LMWP_ArsC cd16345
Arsenate reductase of the LMWP family; Arsenate reductase plays an important role in the ...
6-128 4.13e-69

Arsenate reductase of the LMWP family; Arsenate reductase plays an important role in the reduction of intracellular arsenate to arsenite, an important step in arsenic detoxification. The reduction involves three different thiolate nucleophiles. In arsenate reductases of the LMWP family, reduction can be coupled with thioredoxin (Trx)/thioredoxin reductase (TrxR) or glutathione (GSH)/glutaredoxin (Grx).


Pssm-ID: 319973  Cd Length: 132  Bit Score: 203.83  E-value: 4.13e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713   6 IYFICTGNSCRSQMAEGFGKLILGDKWNVYSAGIETHGVNPHAIKAMKEVGIDISHHTSDLINNDILIESDIVVTLCSDA 85
Cdd:cd16345    2 VLFLCTGNSARSQMAEALLRHLGGDRFEAYSAGSEPAGVNPLAIEVMKEIGIDISGQRSKSLDEFLGQEFDYVITVCDNA 81
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 394256713  86 DANCPVLPKNVTKEHWGFDDPAGKD------WAEFQRVRDEIKTAIETF 128
Cdd:cd16345   82 AEVCPVFPGAVKRLHWGFPDPAAAEgseeekLEAFRRVRDEIKERIEAL 130
Wzb COG0394
Protein-tyrosine-phosphatase [Signal transduction mechanisms];
1-131 1.58e-53

Protein-tyrosine-phosphatase [Signal transduction mechanisms];


Pssm-ID: 440163  Cd Length: 137  Bit Score: 164.56  E-value: 1.58e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713   1 MKRKTIYFICTGNSCRSQMAEGFGKLILGDKWNVYSAGIETHG-VNPHAIKAMKEVGIDISHHTSDLINNDILIESDIVV 79
Cdd:COG0394    1 MMPKRVLFVCTGNICRSPMAEALLRHLAGGRVEVDSAGTEPGGpVDPRAVAVLAERGIDLSGHRSRQLDEEDLPEFDLVI 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 394256713  80 TLCSDADAN-CPVLPKNV-TKEHWGFDDPAGKDWAEFQRVRDEIKTAIETFAHR 131
Cdd:COG0394   81 TMCDSAAEElCPLFPGAAkLLLHWDVPDPYYGGLEAFREVRDEIERRIEALLAK 134
LMWP cd00115
Low molecular weight phosphatase family; Low molecular weight phosphatases (LMWPs) are a group ...
6-129 3.71e-43

Low molecular weight phosphatase family; Low molecular weight phosphatases (LMWPs) are a group of small soluble enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). This family includes protein tyrosine phosphatases, arginine phosphatases and arsenate reductases.


Pssm-ID: 319970  Cd Length: 137  Bit Score: 138.39  E-value: 3.71e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713   6 IYFICTGNSCRSQMAEGFGKLILGDKWNVYSAGIETH---GVNPHAIKAMKEVGIDIShHTSDLINNDILIESDIVVTLC 82
Cdd:cd00115    2 ILFICTGNICRSPMAEAIFKQLLGDEWKVDSAGTGAHhgeGADPRAVRVLKEVGIDIS-HRSDQIKSEHLDNYDLVLVMD 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 394256713  83 SDADANCP---------VLPKNVTKEHWGFDDPAGKDWAEFQRVRDEIKTAIETFA 129
Cdd:cd00115   81 GSNLDKIPrifpeargkTWLPHVKLEHGEIDDPYRGDIEDFRRVRDELENASKRFA 136
LMWPc smart00226
Low molecular weight phosphatase family;
6-129 2.96e-41

Low molecular weight phosphatase family;


Pssm-ID: 197586  Cd Length: 134  Bit Score: 133.37  E-value: 2.96e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713     6 IYFICTGNSCRSQMAEGFGKLILGDKWNVYSAGIET---HGVNPHAIKAMKEVGIDISHHTSDlINNDILIESDIVVTLC 82
Cdd:smart00226   1 ILFVCTGNICRSPMAEALFKAYVGDRVKIDSAGTGAwvgGGADPRAVKVLKEHGIDLSHHASQ-LTSSDFKNADLVLAMD 79
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 394256713    83 SDADAN-CPVLPKNVTK-EHWG----FDDPAGKDWAEFQRVRDEIKTAIETFA 129
Cdd:smart00226  80 GSHLRNiCRLKPPSRAKvELFGhyvdVDDPYYGGIDGFERVYDELENALQEFL 132
LMWPc pfam01451
Low molecular weight phosphotyrosine protein phosphatase;
6-129 1.50e-29

Low molecular weight phosphotyrosine protein phosphatase;


Pssm-ID: 460216  Cd Length: 142  Bit Score: 103.99  E-value: 1.50e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713    6 IYFICTGNSCRSQMAEGF-----GKLILGDKWNVYSAGIET---HGVNPHAIKAMKEVGIDISHHTSDLINNDILIESDI 77
Cdd:pfam01451   1 ILFVCTGNICRSPMAEAIfrrelEKAGLGDKVEVDSAGTGAwpgNPADPRAVEVLKEHGIDLSGHYARQLSTEDFASFDL 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 394256713   78 VVTLCSDADAN-CPVLPKNVT---------KEHWGFDDPAGKDWAEFQRVRDEIKTAIETFA 129
Cdd:pfam01451  81 ILAMDSEHKRDlCPLAPERYRakvmllgeyGEQLDIPDPYYGSIDAFEEVRDLIERRCRQLL 142
LMWPAP cd16344
low molecular weight protein arginine phosphatase; Low molecular weight protein arginine ...
4-126 9.11e-27

low molecular weight protein arginine phosphatase; Low molecular weight protein arginine phosphatases are part of the low molecular weight phosphatase (LMWP) family. They share a highly conserved active site motif (V/I)CXGNTCRS. It has been shown that the conserved threonine, which in many LMWPTPs is an isoleucine, confers specificity to phosphoarginine over phosphotyrosine.


Pssm-ID: 319972  Cd Length: 142  Bit Score: 96.73  E-value: 9.11e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713   4 KTIYFICTGNSCRSQMAEG-FGKLILGDKWNVYSAGIETH---GVNPHAIKAMKEVGIDISHHTSDLINNDILIESDIVV 79
Cdd:cd16344    1 MKILFVCTGNTCRSPMAEAiLKKLLEELDVEVKSAGIFAVdgsPASPNAVEVLKEKGIDLSGHRSQQLTEELLEWADLIL 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 394256713  80 T--------LCSdadaNCPVLPKN-------VTKEHWGFDDPAGKDWAEFQRVRDEIKTAIE 126
Cdd:cd16344   81 TmteshkqaLLS----LYPEAADKvftlkeyVGGEDGDISDPFGGSLEVYRQTAEELEELIE 138
LMWPTP cd16343
Low molecular weight protein tyrosine phosphatase; Low molecular weight protein tyrosine ...
4-129 7.51e-14

Low molecular weight protein tyrosine phosphatase; Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.


Pssm-ID: 319971  Cd Length: 147  Bit Score: 63.61  E-value: 7.51e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 394256713   4 KTIYFICTGNSCRSQMAEG-FGKLI---LGDKWNVYSAGIET-HG---VNPHAIKAMKEVGIDISHHTSDLINNDILIES 75
Cdd:cd16343    1 KKILFVCLGNICRSPMAEAvLRHLLpkaGGDDVEVDSAGTSAwHGgepPDPRARAVLKEHGIDLSGHRARQLTAEDFDEF 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 394256713  76 DIVvtLCSDAD------ANCPVLPKNVTKE--HWGF------DDPAGKDWAEFQRVRDEIKTAIETFA 129
Cdd:cd16343   81 DLI--LAMDESnlrdlrRLAPAEARGKVFLlgDFDPeggkdvPDPYYGGREGFEEVYDLIERACEGLL 146
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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