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Conserved domains on  [gi|38511361|tpe|CAD71139|]
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TPA: coiled-coil domain 1 protein precursor [Homo sapiens]

Protein Classification

MCCD1 domain-containing protein( domain architecture ID 11238925)

MCCD1 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MCCD1 pfam15707
Mitochondrial coiled-coil domain protein 1; This is a family of uncharacterized proteins known ...
 26-117 8.61e-41

Mitochondrial coiled-coil domain protein 1; This is a family of uncharacterized proteins known as mitochondrial coiled-coil domain protein 1.


:

Pssm-ID: 406198  Cd Length: 90  Bit Score: 130.51  E-value: 8.61e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38511361    26 QGSHGCCSQNPKASMEEqTNSRGNGKMtSPPRGPGTHRTAELARAEELLEQQLELYQALLEGQEGAWEAQALVLKIQKLK 105
Cdd:pfam15707   1 QGSWRCCSQNPKPSTEE-ASSEGSGKM-SPSRGPGPRPTAELAQAEELLEQQLELYQALLEGQEGAWEAQALVLKIQKLK 78

                          90
                  ....*....|..
gi 38511361   106 EQMRRHQESLGG 117
Cdd:pfam15707  79 EQMRRHRESLGG 90
 
Name Accession Description Interval E-value
MCCD1 pfam15707
Mitochondrial coiled-coil domain protein 1; This is a family of uncharacterized proteins known ...
 26-117 8.61e-41

Mitochondrial coiled-coil domain protein 1; This is a family of uncharacterized proteins known as mitochondrial coiled-coil domain protein 1.


Pssm-ID: 406198  Cd Length: 90  Bit Score: 130.51  E-value: 8.61e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38511361    26 QGSHGCCSQNPKASMEEqTNSRGNGKMtSPPRGPGTHRTAELARAEELLEQQLELYQALLEGQEGAWEAQALVLKIQKLK 105
Cdd:pfam15707   1 QGSWRCCSQNPKPSTEE-ASSEGSGKM-SPSRGPGPRPTAELAQAEELLEQQLELYQALLEGQEGAWEAQALVLKIQKLK 78

                          90
                  ....*....|..
gi 38511361   106 EQMRRHQESLGG 117
Cdd:pfam15707  79 EQMRRHRESLGG 90
 
Name Accession Description Interval E-value
MCCD1 pfam15707
Mitochondrial coiled-coil domain protein 1; This is a family of uncharacterized proteins known ...
 26-117 8.61e-41

Mitochondrial coiled-coil domain protein 1; This is a family of uncharacterized proteins known as mitochondrial coiled-coil domain protein 1.


Pssm-ID: 406198  Cd Length: 90  Bit Score: 130.51  E-value: 8.61e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38511361    26 QGSHGCCSQNPKASMEEqTNSRGNGKMtSPPRGPGTHRTAELARAEELLEQQLELYQALLEGQEGAWEAQALVLKIQKLK 105
Cdd:pfam15707   1 QGSWRCCSQNPKPSTEE-ASSEGSGKM-SPSRGPGPRPTAELAQAEELLEQQLELYQALLEGQEGAWEAQALVLKIQKLK 78

                          90
                  ....*....|..
gi 38511361   106 EQMRRHQESLGG 117
Cdd:pfam15707  79 EQMRRHRESLGG 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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