|
Name |
Accession |
Description |
Interval |
E-value |
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
640-784 |
3.75e-39 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 141.69 E-value: 3.75e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 640 CYDAFVSYSEQDsyWVENLMVQQLENSDPPFKLCLHKRDFVPGKWIIDNIIDSIEKSHKTVFVLSENFVRSEWCKYELDF 719
Cdd:smart00255 1 EYDVFISYSGKE--DVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVA 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 38454274 720 SHFRLFDENNDAAILVLLEPIeKKAIPQRFCKLRKIMnTKTYLEWPLDEGQRevFWANLRTAIKS 784
Cdd:smart00255 79 ALENALEEGGLRVIPIFYEVI-PSDVRKQPGKFRKVF-KKNYLKWPEDEKEQ--FWKKALYAVPS 139
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
335-551 |
4.77e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 87.30 E-value: 4.77e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 335 LEKVKRITVENSKVFLVPCSFSQhLKSLEFLDLSENLM--VEEYLKNsaceggWPSLQSLVLSQNHLRSIRKTaeiLLTL 412
Cdd:COG4886 112 LTNLESLDLSGNQLTDLPEELAN-LTNLKELDLSNNQLtdLPEPLGN------LTNLKSLDLSNNQLTDLPEE---LGNL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 413 KNLTALDISKNSFQPMPDSCQWPGKMRFLNLSSTGIQAVKTCIPQ--TLEVLDVSNNNLDSFSLF--LPRLQELYISRNK 488
Cdd:COG4886 182 TNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLANltNLETLDLSNNQLTDLPELgnLTNLEELDLSNNQ 261
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 38454274 489 LKTLPEASLFPVLQVMKIRENAISTFSKDQLGSFPKLETLEAGDNHFICSCELLSFILERPAL 551
Cdd:COG4886 262 LTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLL 324
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
641-784 |
7.29e-18 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 81.64 E-value: 7.29e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 641 YDAFVSYSEQDSY-WVENLMVQQLenSDPPFKLCLHKRDFVPGKWIIDNIIDSIEKSHKTVFVLSENFVRSEWCKYELDF 719
Cdd:pfam01582 1 YDVFLSFRGSDTReWFVSHLLKEL--KQKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVK 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 720 S-HFRLfdENNDAAILVLLEPIE------KKAIPQRFCKLRKIMNTKTYLEWP---------------LDEGQrevFWAN 777
Cdd:pfam01582 79 IlECAL--DLGQKVIPIFYEVDPsdvrkqTGSFGKAFKKHKKVLTEEKVLKWRgalnevaniwhsksvSDESK---FWKK 153
|
....*..
gi 38454274 778 LRTAIKS 784
Cdd:pfam01582 154 IAYDISN 160
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
340-558 |
2.36e-09 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 60.87 E-value: 2.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 340 RITVENSKVFLVPCSFSQHLKSLeFLDLSENLMVEEYLKNSaceggwpsLQSLVLSQNHLRSIRKT-----AEILLTLKN 414
Cdd:PRK15370 182 ELRLKILGLTTIPACIPEQITTL-ILDNNELKSLPENLQGN--------IKTLYANSNQLTSIPATlpdtiQEMELSINR 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 415 LT-----------ALDISKNSFQPMPDSCqwPGKMRFLNLSSTGIQAVKTCIPQTLEVLDVSNNNLDSFSLFLP-RLQEL 482
Cdd:PRK15370 253 ITelperlpsalqSLDLFHNKISCLPENL--PEELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTALPETLPpGLKTL 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 483 YISRNKLKTLPEaSLFPVLQVMKIRENAISTF-------------SKDQLGSFPK-----LETLEAGDNHFICSCELL-S 543
Cdd:PRK15370 331 EAGENALTSLPA-SLPPELQVLDVSKNQITVLpetlpptittldvSRNALTNLPEnlpaaLQIMQASRNNLVRLPESLpH 409
|
250
....*....|....*
gi 38454274 544 FILERPALVHVLVDW 558
Cdd:PRK15370 410 FRGEGPQPTRIIVEY 424
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
39-290 |
1.06e-08 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 58.02 E-value: 1.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 39 SSRSFTSIPSGLTANT--KKLDLSFNKITYIGHgDLRACVNLRVLTLESSGINTIeGDAFYSLGSLEHLDLSNNhLSSLS 116
Cdd:COG4886 144 SNNQLTDLPEPLGNLTnlKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGN-QLTDL 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 117 SSWFRPLSSLKYLNLMGNPYRTLGEtslFSNLTNLQTLRVGNvdtfSEIRRIDF-AGLTSLNELEIQVLSLGNYESRSLQ 195
Cdd:COG4886 221 PEPLANLTNLETLDLSNNQLTDLPE---LGNLTNLEELDLSN----NQLTDLPPlANLTNLKTLDLSNNQLTDLKLKELE 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 196 SIRDIYHLTLHLSESAFLLGIFADILSSVRYLELRDTNLARFQFSELSVDEINSPMKKLAFRNADLTDKSFNELLKLLRY 275
Cdd:COG4886 294 LLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLG 373
|
250
....*....|....*
gi 38454274 276 ILELMEVEFDHCTLN 290
Cdd:COG4886 374 LLEATLLTLALLLLT 388
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
324-535 |
2.66e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 50.05 E-value: 2.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 324 LFYDLSTVYSLLE-KVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLmveeyLKNSACEG------GWPSLQSLVLSQ 396
Cdd:cd00116 100 VLESLLRSSSLQElKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNR-----LEGASCEAlakalrANRDLKELNLAN 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 397 NHLRS--IRKTAEILLTLKNLTALDISKNSFQPmpdscqwpgkmrflnlssTGIQAVKTCIPQ--TLEVLDVSNNNLDS- 471
Cdd:cd00116 175 NGIGDagIRALAEGLKANCNLEVLDLNNNGLTD------------------EGASALAETLASlkSLEVLNLGDNNLTDa 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 472 --------FSLFLPRLQELYISRNKL-----KTLPEA-SLFPVLQVMKIRENAISTFSKDQLGS-----FPKLETLEAGD 532
Cdd:cd00116 237 gaaalasaLLSPNISLLTLSLSCNDItddgaKDLAEVlAEKESLLELDLRGNKFGEEGAQLLAEsllepGNELESLWVKD 316
|
...
gi 38454274 533 NHF 535
Cdd:cd00116 317 DSF 319
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
77-135 |
6.38e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.05 E-value: 6.38e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 38454274 77 NLRVLTLESSGINTIEGDAFYSLGSLEHLDLSNNHLSSLSSSWFRPLSSLKYLNLMGNP 135
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNR 60
|
|
| LRRCT |
smart00082 |
Leucine rich repeat C-terminal domain; |
533-586 |
1.34e-05 |
|
Leucine rich repeat C-terminal domain;
Pssm-ID: 214507 [Multi-domain] Cd Length: 51 Bit Score: 42.80 E-value: 1.34e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 38454274 533 NHFICSCELLSFILERPALVHVLvdWPDSYLCDSPPRLHGqRLQDARPSVLECH 586
Cdd:smart00082 1 NPFICDCELRWLLRWLQANEHLQ--DPVDLRCASPSSLRG-PLLELLHSEFKCP 51
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
477-535 |
3.42e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.13 E-value: 3.42e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 38454274 477 PRLQELYISRNKLKTLPEASLF--PVLQVMKIRENAISTFSKDQLGSFPKLETLEAGDNHF 535
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKglSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
39-535 |
6.08e-05 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 46.76 E-value: 6.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 39 SSRSFT-SIPSGLTANTKKLDLSFNKITYIGHGDLRACVNLRVLTLessGINTIEGDAFYSLGSlehldlsnnhlsslss 117
Cdd:PLN00113 126 SNNNFTgSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDL---GGNVLVGKIPNSLTN---------------- 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 118 swfrpLSSLKYLNLMGNPY-----RTLGEtslfsnLTNLQTLRVGNVDTFSEIrRIDFAGLTSLNELEIQVLSLGNYESR 192
Cdd:PLN00113 187 -----LTSLEFLTLASNQLvgqipRELGQ------MKSLKWIYLGYNNLSGEI-PYEIGGLTSLNHLDLVYNNLTGPIPS 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 193 SLQSIRDIYHLTLHLSESAFLL--GIFAdiLSSVRYLELRDTNLARfQFSELSVDEINSPMKKLaFRNaDLTDKSFNELL 270
Cdd:PLN00113 255 SLGNLKNLQYLFLYQNKLSGPIppSIFS--LQKLISLDLSDNSLSG-EIPELVIQLQNLEILHL-FSN-NFTGKIPVALT 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 271 KLLRY-ILELMEVEFdhctlngvgnfnpsESDVVRELGKVETVTIrslhipqfylfYDLSTvysllekvkritveNSKVF 349
Cdd:PLN00113 330 SLPRLqVLQLWSNKF--------------SGEIPKNLGKHNNLTV-----------LDLST--------------NNLTG 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 350 LVP---CSfSQHLKSLEFLDLSENLMVEEYLknSACEggwpSLQSLVLSQNHLRSIRKTAEILLTLKNLtaLDISKNSFQ 426
Cdd:PLN00113 371 EIPeglCS-SGNLFKLILFSNSLEGEIPKSL--GACR----SLRRVRLQDNSFSGELPSEFTKLPLVYF--LDISNNNLQ 441
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 427 PMPDSCQWPgkmrflnlsstgiqavktcIPQtLEVLDVSNNNldsFSLFLP------RLQELYISRNKLKTLPEASL--F 498
Cdd:PLN00113 442 GRINSRKWD-------------------MPS-LQMLSLARNK---FFGGLPdsfgskRLENLDLSRNQFSGAVPRKLgsL 498
|
490 500 510
....*....|....*....|....*....|....*..
gi 38454274 499 PVLQVMKIRENAISTFSKDQLGSFPKLETLEAGDNHF 535
Cdd:PLN00113 499 SELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQL 535
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
640-784 |
3.75e-39 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 141.69 E-value: 3.75e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 640 CYDAFVSYSEQDsyWVENLMVQQLENSDPPFKLCLHKRDFVPGKWIIDNIIDSIEKSHKTVFVLSENFVRSEWCKYELDF 719
Cdd:smart00255 1 EYDVFISYSGKE--DVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVA 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 38454274 720 SHFRLFDENNDAAILVLLEPIeKKAIPQRFCKLRKIMnTKTYLEWPLDEGQRevFWANLRTAIKS 784
Cdd:smart00255 79 ALENALEEGGLRVIPIFYEVI-PSDVRKQPGKFRKVF-KKNYLKWPEDEKEQ--FWKKALYAVPS 139
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
335-551 |
4.77e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 87.30 E-value: 4.77e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 335 LEKVKRITVENSKVFLVPCSFSQhLKSLEFLDLSENLM--VEEYLKNsaceggWPSLQSLVLSQNHLRSIRKTaeiLLTL 412
Cdd:COG4886 112 LTNLESLDLSGNQLTDLPEELAN-LTNLKELDLSNNQLtdLPEPLGN------LTNLKSLDLSNNQLTDLPEE---LGNL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 413 KNLTALDISKNSFQPMPDSCQWPGKMRFLNLSSTGIQAVKTCIPQ--TLEVLDVSNNNLDSFSLF--LPRLQELYISRNK 488
Cdd:COG4886 182 TNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLANltNLETLDLSNNQLTDLPELgnLTNLEELDLSNNQ 261
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 38454274 489 LKTLPEASLFPVLQVMKIRENAISTFSKDQLGSFPKLETLEAGDNHFICSCELLSFILERPAL 551
Cdd:COG4886 262 LTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLL 324
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
641-784 |
7.29e-18 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 81.64 E-value: 7.29e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 641 YDAFVSYSEQDSY-WVENLMVQQLenSDPPFKLCLHKRDFVPGKWIIDNIIDSIEKSHKTVFVLSENFVRSEWCKYELDF 719
Cdd:pfam01582 1 YDVFLSFRGSDTReWFVSHLLKEL--KQKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVK 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 720 S-HFRLfdENNDAAILVLLEPIE------KKAIPQRFCKLRKIMNTKTYLEWP---------------LDEGQrevFWAN 777
Cdd:pfam01582 79 IlECAL--DLGQKVIPIFYEVDPsdvrkqTGSFGKAFKKHKKVLTEEKVLKWRgalnevaniwhsksvSDESK---FWKK 153
|
....*..
gi 38454274 778 LRTAIKS 784
Cdd:pfam01582 154 IAYDISN 160
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
350-535 |
2.33e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 85.37 E-value: 2.33e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 350 LVPCSFSQHLKSLEFLDLSENLMVE--EYLKNsaceggWPSLQSLVLSQNHLRSIRKTaeiLLTLKNLTALDISKNSFQP 427
Cdd:COG4886 103 LSGNEELSNLTNLESLDLSGNQLTDlpEELAN------LTNLKELDLSNNQLTDLPEP---LGNLTNLKSLDLSNNQLTD 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 428 MPDSCQWPGKMRFLNLSSTGIQAVKTCIPQ--TLEVLDVSNNNLDSFSLF---LPRLQELYISRNKLKTLPEASLFPVLQ 502
Cdd:COG4886 174 LPEELGNLTNLKELDLSNNQITDLPEPLGNltNLEELDLSGNQLTDLPEPlanLTNLETLDLSNNQLTDLPELGNLTNLE 253
|
170 180 190
....*....|....*....|....*....|...
gi 38454274 503 VMKIRENAISTFSKdqLGSFPKLETLEAGDNHF 535
Cdd:COG4886 254 ELDLSNNQLTDLPP--LANLTNLKTLDLSNNQL 284
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
334-535 |
2.11e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 82.29 E-value: 2.11e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 334 LLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEyLKNsaceggwpsLQSLVLSQNHLRSIrktAEILLTLK 413
Cdd:COG4886 70 SLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSN-LTN---------LESLDLSGNQLTDL---PEELANLT 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 414 NLTALDISKNSFQPMPDSCQWPGKMRFLNLSSTGIQAVKTCIPQ--TLEVLDVSNNNLDSFSLF---LPRLQELYISRNK 488
Cdd:COG4886 137 NLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDLPEELGNltNLKELDLSNNQITDLPEPlgnLTNLEELDLSGNQ 216
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 38454274 489 LKTLPEA-SLFPVLQVMKIRENAISTFSkdQLGSFPKLETLEAGDNHF 535
Cdd:COG4886 217 LTDLPEPlANLTNLETLDLSNNQLTDLP--ELGNLTNLEELDLSNNQL 262
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
644-718 |
2.86e-14 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 69.65 E-value: 2.86e-14
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 38454274 644 FVSYSEQDSYWVENLmVQQLENSDppFKLCLHKRDFVPGKWIIDNIIDSIEKSHKTVFVLSENFVRSEWCKYELD 718
Cdd:pfam13676 2 FISYAGEDRAWAEWL-ADALEAAG--YRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWE 73
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
359-535 |
8.30e-12 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 68.04 E-value: 8.30e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 359 LKSLEFLDLSENLMVEEYLKNSACEGGWPSLQSLVLSQNhlrsirktaEILLTLKNLTALDISKNSFQPMPDSCQWPGKM 438
Cdd:COG4886 68 LLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN---------EELSNLTNLESLDLSGNQLTDLPEELANLTNL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 439 RFLNLSSTGIQAVKTCIPQ--TLEVLDVSNNNLDSFSLF---LPRLQELYISRNKLKTLPEA-SLFPVLQVMKIRENAIS 512
Cdd:COG4886 139 KELDLSNNQLTDLPEPLGNltNLKSLDLSNNQLTDLPEElgnLTNLKELDLSNNQITDLPEPlGNLTNLEELDLSGNQLT 218
|
170 180
....*....|....*....|...
gi 38454274 513 TFSkDQLGSFPKLETLEAGDNHF 535
Cdd:COG4886 219 DLP-EPLANLTNLETLDLSNNQL 240
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
194-551 |
1.11e-11 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 67.65 E-value: 1.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 194 LQSIRDIYHLTLHLSESAFLLGIFADILSSVRYLELRDTNLARFQFSELSVDEINSPMKKLAFRNADLTDKSFNELLKLL 273
Cdd:COG4886 2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 274 RYILELMEVEFDHctLNGVGNFNPSESDVVRELGKVETVTIRSLHIpqfylfYDLSTVYSLLEKVKRITVENSKVFLVPC 353
Cdd:COG4886 82 LSLLLLGLTDLGD--LTNLTELDLSGNEELSNLTNLESLDLSGNQL------TDLPEELANLTNLKELDLSNNQLTDLPE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 354 SFSQhLKSLEFLDLSENLMVEeyLKNSAceGGWPSLQSLVLSQNHLRSIrktAEILLTLKNLTALDISKNSFQPMPDSCQ 433
Cdd:COG4886 154 PLGN-LTNLKSLDLSNNQLTD--LPEEL--GNLTNLKELDLSNNQITDL---PEPLGNLTNLEELDLSGNQLTDLPEPLA 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 434 WPGKMRFLNLSSTGIqavkTCIPQ-----TLEVLDVSNNNLDSF--SLFLPRLQELYISRNKLKTLPEASLFPVLQVMKI 506
Cdd:COG4886 226 NLTNLETLDLSNNQL----TDLPElgnltNLEELDLSNNQLTDLppLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSL 301
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 38454274 507 RENAISTFSKDQLGSFPKLETLEAGDNHFICSCELLSFILERPAL 551
Cdd:COG4886 302 LLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSL 346
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
340-558 |
2.36e-09 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 60.87 E-value: 2.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 340 RITVENSKVFLVPCSFSQHLKSLeFLDLSENLMVEEYLKNSaceggwpsLQSLVLSQNHLRSIRKT-----AEILLTLKN 414
Cdd:PRK15370 182 ELRLKILGLTTIPACIPEQITTL-ILDNNELKSLPENLQGN--------IKTLYANSNQLTSIPATlpdtiQEMELSINR 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 415 LT-----------ALDISKNSFQPMPDSCqwPGKMRFLNLSSTGIQAVKTCIPQTLEVLDVSNNNLDSFSLFLP-RLQEL 482
Cdd:PRK15370 253 ITelperlpsalqSLDLFHNKISCLPENL--PEELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTALPETLPpGLKTL 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 483 YISRNKLKTLPEaSLFPVLQVMKIRENAISTF-------------SKDQLGSFPK-----LETLEAGDNHFICSCELL-S 543
Cdd:PRK15370 331 EAGENALTSLPA-SLPPELQVLDVSKNQITVLpetlpptittldvSRNALTNLPEnlpaaLQIMQASRNNLVRLPESLpH 409
|
250
....*....|....*
gi 38454274 544 FILERPALVHVLVDW 558
Cdd:PRK15370 410 FRGEGPQPTRIIVEY 424
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
39-290 |
1.06e-08 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 58.02 E-value: 1.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 39 SSRSFTSIPSGLTANT--KKLDLSFNKITYIGHgDLRACVNLRVLTLESSGINTIeGDAFYSLGSLEHLDLSNNhLSSLS 116
Cdd:COG4886 144 SNNQLTDLPEPLGNLTnlKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGN-QLTDL 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 117 SSWFRPLSSLKYLNLMGNPYRTLGEtslFSNLTNLQTLRVGNvdtfSEIRRIDF-AGLTSLNELEIQVLSLGNYESRSLQ 195
Cdd:COG4886 221 PEPLANLTNLETLDLSNNQLTDLPE---LGNLTNLEELDLSN----NQLTDLPPlANLTNLKTLDLSNNQLTDLKLKELE 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 196 SIRDIYHLTLHLSESAFLLGIFADILSSVRYLELRDTNLARFQFSELSVDEINSPMKKLAFRNADLTDKSFNELLKLLRY 275
Cdd:COG4886 294 LLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLG 373
|
250
....*....|....*
gi 38454274 276 ILELMEVEFDHCTLN 290
Cdd:COG4886 374 LLEATLLTLALLLLT 388
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
324-535 |
2.66e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 50.05 E-value: 2.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 324 LFYDLSTVYSLLE-KVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLmveeyLKNSACEG------GWPSLQSLVLSQ 396
Cdd:cd00116 100 VLESLLRSSSLQElKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNR-----LEGASCEAlakalrANRDLKELNLAN 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 397 NHLRS--IRKTAEILLTLKNLTALDISKNSFQPmpdscqwpgkmrflnlssTGIQAVKTCIPQ--TLEVLDVSNNNLDS- 471
Cdd:cd00116 175 NGIGDagIRALAEGLKANCNLEVLDLNNNGLTD------------------EGASALAETLASlkSLEVLNLGDNNLTDa 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 472 --------FSLFLPRLQELYISRNKL-----KTLPEA-SLFPVLQVMKIRENAISTFSKDQLGS-----FPKLETLEAGD 532
Cdd:cd00116 237 gaaalasaLLSPNISLLTLSLSCNDItddgaKDLAEVlAEKESLLELDLRGNKFGEEGAQLLAEsllepGNELESLWVKD 316
|
...
gi 38454274 533 NHF 535
Cdd:cd00116 317 DSF 319
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
77-135 |
6.38e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.05 E-value: 6.38e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 38454274 77 NLRVLTLESSGINTIEGDAFYSLGSLEHLDLSNNHLSSLSSSWFRPLSSLKYLNLMGNP 135
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNR 60
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
358-528 |
7.29e-06 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 47.86 E-value: 7.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 358 HLKSLEFLDLSENLmVEEYLKNSACE-----GGWPSLQSLVLSQNHLRSIrktaEILLTLKNLTALDISKnsfQPMPDSC 432
Cdd:cd21340 35 KITKIENLEFLTNL-THLYLQNNQIEkienlENLVNLKKLYLGGNRISVV----EGLENLTNLEELHIEN---QRLPPGE 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 433 qwpgKMRFLNLSSTGIQavktcipQTLEVLDVSNNNLDSFSLF--LPRLQELYISRNKLKTLPEA----SLFPVLQVMKI 506
Cdd:cd21340 107 ----KLTFDPRSLAALS-------NSLRVLNISGNNIDSLEPLapLRNLEQLDASNNQISDLEELldllSSWPSLRELDL 175
|
170 180
....*....|....*....|....*
gi 38454274 507 RENAISTFSK--DQL-GSFPKLETL 528
Cdd:cd21340 176 TGNPVCKKPKyrDKIiLASKSLEVL 200
|
|
| LRRCT |
smart00082 |
Leucine rich repeat C-terminal domain; |
533-586 |
1.34e-05 |
|
Leucine rich repeat C-terminal domain;
Pssm-ID: 214507 [Multi-domain] Cd Length: 51 Bit Score: 42.80 E-value: 1.34e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 38454274 533 NHFICSCELLSFILERPALVHVLvdWPDSYLCDSPPRLHGqRLQDARPSVLECH 586
Cdd:smart00082 1 NPFICDCELRWLLRWLQANEHLQ--DPVDLRCASPSSLRG-PLLELLHSEFKCP 51
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
477-535 |
3.42e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.13 E-value: 3.42e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 38454274 477 PRLQELYISRNKLKTLPEASLF--PVLQVMKIRENAISTFSKDQLGSFPKLETLEAGDNHF 535
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKglSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
362-533 |
5.53e-05 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 46.47 E-value: 5.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 362 LEFLDLSENLMVEEYLKNSACEGGWPSLQSLVLSQNHLRSIRKTAEILLTLKNLTALDISKNSFQPMPDSCQWPGKMRFL 441
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 442 NLSSTGIQAVKTCIPQTLEVLDVSNNNLDSfslFLPRLQELYISRNKLKTLPEA-SLFPVLQVMKIRENAISTFSKDqLG 520
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELDLSGNEELS---NLTNLESLDLSGNQLTDLPEElANLTNLKELDLSNNQLTDLPEP-LG 156
|
170
....*....|...
gi 38454274 521 SFPKLETLEAGDN 533
Cdd:COG4886 157 NLTNLKSLDLSNN 169
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
39-535 |
6.08e-05 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 46.76 E-value: 6.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 39 SSRSFT-SIPSGLTANTKKLDLSFNKITYIGHGDLRACVNLRVLTLessGINTIEGDAFYSLGSlehldlsnnhlsslss 117
Cdd:PLN00113 126 SNNNFTgSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDL---GGNVLVGKIPNSLTN---------------- 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 118 swfrpLSSLKYLNLMGNPY-----RTLGEtslfsnLTNLQTLRVGNVDTFSEIrRIDFAGLTSLNELEIQVLSLGNYESR 192
Cdd:PLN00113 187 -----LTSLEFLTLASNQLvgqipRELGQ------MKSLKWIYLGYNNLSGEI-PYEIGGLTSLNHLDLVYNNLTGPIPS 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 193 SLQSIRDIYHLTLHLSESAFLL--GIFAdiLSSVRYLELRDTNLARfQFSELSVDEINSPMKKLaFRNaDLTDKSFNELL 270
Cdd:PLN00113 255 SLGNLKNLQYLFLYQNKLSGPIppSIFS--LQKLISLDLSDNSLSG-EIPELVIQLQNLEILHL-FSN-NFTGKIPVALT 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 271 KLLRY-ILELMEVEFdhctlngvgnfnpsESDVVRELGKVETVTIrslhipqfylfYDLSTvysllekvkritveNSKVF 349
Cdd:PLN00113 330 SLPRLqVLQLWSNKF--------------SGEIPKNLGKHNNLTV-----------LDLST--------------NNLTG 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 350 LVP---CSfSQHLKSLEFLDLSENLMVEEYLknSACEggwpSLQSLVLSQNHLRSIRKTAEILLTLKNLtaLDISKNSFQ 426
Cdd:PLN00113 371 EIPeglCS-SGNLFKLILFSNSLEGEIPKSL--GACR----SLRRVRLQDNSFSGELPSEFTKLPLVYF--LDISNNNLQ 441
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 427 PMPDSCQWPgkmrflnlsstgiqavktcIPQtLEVLDVSNNNldsFSLFLP------RLQELYISRNKLKTLPEASL--F 498
Cdd:PLN00113 442 GRINSRKWD-------------------MPS-LQMLSLARNK---FFGGLPdsfgskRLENLDLSRNQFSGAVPRKLgsL 498
|
490 500 510
....*....|....*....|....*....|....*..
gi 38454274 499 PVLQVMKIRENAISTFSKDQLGSFPKLETLEAGDNHF 535
Cdd:PLN00113 499 SELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQL 535
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
53-107 |
1.26e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.59 E-value: 1.26e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 38454274 53 NTKKLDLSFNKITYIGHGDLRACVNLRVLTLESSGINTIEGDAFYSLGSLEHLDL 107
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDL 56
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
52-273 |
4.21e-04 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 43.38 E-value: 4.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 52 ANTKKLDLSFNKityighgDLRACVNLRVLTLESSGINTIeGDAFYSLGSLEHLDLsNNHLSSLSSSWFRPLSSLKYLNL 131
Cdd:COG4886 96 TNLTELDLSGNE-------ELSNLTNLESLDLSGNQLTDL-PEELANLTNLKELDL-SNNQLTDLPEPLGNLTNLKSLDL 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 132 MGNPYRTLGETslFSNLTNLQTLRVGN--VDTFSEirriDFAGLTSLNELEI---QVLSLgnyeSRSLQSIRDIYHLTLH 206
Cdd:COG4886 167 SNNQLTDLPEE--LGNLTNLKELDLSNnqITDLPE----PLGNLTNLEELDLsgnQLTDL----PEPLANLTNLETLDLS 236
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 207 ---LSESAFLLGifadiLSSVRYLELRDTnlarfQFSELSVDEINSPMKKLAFRNADLTDKSFNELLKLL 273
Cdd:COG4886 237 nnqLTDLPELGN-----LTNLEELDLSNN-----QLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLL 296
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
441-535 |
5.65e-04 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 43.61 E-value: 5.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 441 LNLSSTGIQAVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPeaSLFPVLQVMKIRENAISTFSK---- 516
Cdd:PRK15387 206 LNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLP--VLPPGLLELSIFSNPLTHLPAlpsg 283
|
90 100 110
....*....|....*....|....*....|.
gi 38454274 517 --------DQLGSF----PKLETLEAGDNHF 535
Cdd:PRK15387 284 lcklwifgNQLTSLpvlpPGLQELSVSDNQL 314
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
387-448 |
1.42e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.50 E-value: 1.42e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 38454274 387 PSLQSLVLSQNHLRSIRKTAeiLLTLKNLTALDISKNSFQPM-PDSCQWPGKMRFLNLSSTGI 448
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGA--FKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
414-489 |
2.32e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.12 E-value: 2.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 414 NLTALDISKNSFQPMPDSCqwpgkmrFLNLSStgiqavktcipqtLEVLDVSNNNLDSFSL----FLPRLQELYISRNKL 489
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGA-------FKGLSN-------------LKVLDLSNNLLTTLSPgafsGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
356-555 |
4.84e-03 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 40.03 E-value: 4.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 356 SQHLKSL---EFLDLSENLMVEEYLKNSACE-GGWPSLQSLVLSQNHLRSI----RKTAEILLTLKNLTALDISKNSFQp 427
Cdd:cd00116 16 TELLPKLlclQVLRLEGNTLGEEAAKALASAlRPQPSLKELCLSLNETGRIprglQSLLQGLTKGCGLQELDLSDNALG- 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38454274 428 mPDSCQwpgkmRFLNLSSTgiqavktcipQTLEVLDVSNNNLDSFSLFL---------PRLQELYISRNKLK---TLPEA 495
Cdd:cd00116 95 -PDGCG-----VLESLLRS----------SSLQELKLNNNGLGDRGLRLlakglkdlpPALEKLVLGRNRLEgasCEALA 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 38454274 496 SLFPV---LQVMKIRENAISTFS----KDQLGSFPKLETLEAGDNHFICS-CELLSFILERPALVHVL 555
Cdd:cd00116 159 KALRAnrdLKELNLANNGIGDAGiralAEGLKANCNLEVLDLNNNGLTDEgASALAETLASLKSLEVL 226
|
|
|