|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-339 |
1.21e-89 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 271.70 E-value: 1.21e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 1 MDNNSTKLLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIQL 80
Cdd:MTH00160 1 MMMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 81 KYSMSwesEMIPSMLVSSSLLLKIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMILSYCIQlSNFIFIIVISSVII 160
Cdd:MTH00160 81 NLMLF---NNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLIN-NNFIIIIIILSAII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 161 GALGGLNQTSIRHLLAYSSISHLGWMISSMVASENIWEIYFTIYSLLSLILVLIFKQANLFFLNQIYTASNMKMEIKFMM 240
Cdd:MTH00160 157 GAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 241 FLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRISFSALILLYTENSWSLNIKNKTFNFILP 320
Cdd:MTH00160 237 FLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFSLILN 316
|
330
....*....|....*....
gi 383215329 321 MTVMISTMGLSCTSVLIFM 339
Cdd:MTH00160 317 FLSFISLFGLILSSLLFLL 335
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
24-282 |
1.37e-21 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 92.76 E-value: 1.37e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 24 SNSWFGVWMGLEINLLSFIPMLTNNKNSMI-NESSIKYFIVQAMASTMLLFSILLI--------------QLKYSMSWES 88
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRsSEAGMKYFLLTLLGSSILLFGISLMynytgtlsfdelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 89 EMIPSMLVSSSLLLKIGAAPFHFWFPEVMGTSEWLN-CLMLMTWQKIAPMMIL-------SYCIQLSNFIFIIVISSVII 160
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVsALLAATLVKAGGYGLIrrsllylPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 161 GALGGLNQTSIRHLLAYSSISHLGWMISSMVASENIWEIYFTIYSLL-SLILVLIFKQANLFFLNQIYTASN-------M 232
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLThGLFSAGLFLCAGSVIYRRVHTRNIrdygglaK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 383215329 233 KMEIKFM-MFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLT 282
Cdd:pfam00361 241 TMPILALvFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-292 |
1.46e-20 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 92.10 E-value: 1.46e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 8 LLFLSTLmmGTILSISSNSWFGVWMGLEINLLSF---IPMLTNNKNSmiNESSIKYFIVQAMASTMLLF----------S 74
Cdd:COG1007 107 LLLFATL--GMMLMASANDLLTLFLGLELLSLSLyvlVAFRRDDRRS--SEAALKYFLLGALSSGFLLYgisllygatgS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 75 ILLIQLKYSMSWESEMIPSMLVSSSLLL-----KIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMIL--------- 140
Cdd:COG1007 183 LNLAGIAAALAAGGANSPLLLLGLVLVLaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALlrllveafp 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 141 SYCIQLSNFIFIIVISSVIIGALGGLNQTSIRHLLAYSSISHLGWMISSMVA-SENIWE---IYFTIYSLlslilvlifk 216
Cdd:COG1007 263 GLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAgTPLGVSaalFYLLAYLF---------- 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 217 qANL---FFLNQIYTASNMKMEIK-------------FMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVM 280
Cdd:COG1007 333 -MNLgafAVILLLSRKGGEAEEIEdlaglarrspllaLAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVL 411
|
330
....*....|..
gi 383215329 281 LTMITLYYYLRI 292
Cdd:COG1007 412 NSVISAYYYLRV 423
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
8-330 |
5.42e-16 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 78.45 E-value: 5.42e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 8 LLFLSTLmmGTILSISSNSWFGVWMGLEI-NLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLI-------- 78
Cdd:TIGR01770 107 LLLFALL--GIFLLVSSNDLLSIYLGLELqSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIygftgsln 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 79 --QLKYSMSWESEMIPSMLVSSSLLL-----KIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIA---PMMILSYCIQ--- 145
Cdd:TIGR01770 185 feDLLLFLSNGMLNISLLLLGIVLILvgllfKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAifaVFLRLFLYILfgf 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 146 ---LSNFIFIIVISSVIIGALGGLNQTSIRHLLAYSSISHLGW-MISSMVASENIWE---IYFTIYSLLSLILVLIFKQA 218
Cdd:TIGR01770 265 seaWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYiLIGLLAGTLEGIKavlFYIFIYALMSLGAFGVLSLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 219 NLFFLNQIYTASNMKMEIK------FMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRI 292
Cdd:TIGR01770 345 RSYKDEWIEYISDFAGLFKtnpilaILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
330 340 350
....*....|....*....|....*....|....*...
gi 383215329 293 sfSALILLYTENSWslnIKNKTFNFILPMTVMISTMGL 330
Cdd:TIGR01770 425 --VKVMYFDKPERR---IPSNPQSKAQSLLLSISALFI 457
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-339 |
1.21e-89 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 271.70 E-value: 1.21e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 1 MDNNSTKLLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIQL 80
Cdd:MTH00160 1 MMMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 81 KYSMSwesEMIPSMLVSSSLLLKIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMILSYCIQlSNFIFIIVISSVII 160
Cdd:MTH00160 81 NLMLF---NNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLIN-NNFIIIIIILSAII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 161 GALGGLNQTSIRHLLAYSSISHLGWMISSMVASENIWEIYFTIYSLLSLILVLIFKQANLFFLNQIYTASNMKMEIKFMM 240
Cdd:MTH00160 157 GAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 241 FLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRISFSALILLYTENSWSLNIKNKTFNFILP 320
Cdd:MTH00160 237 FLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFSLILN 316
|
330
....*....|....*....
gi 383215329 321 MTVMISTMGLSCTSVLIFM 339
Cdd:MTH00160 317 FLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
3-340 |
3.40e-60 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 196.69 E-value: 3.40e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 3 NNSTKLLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSIlLIQLKY 82
Cdd:MTH00041 2 NRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGA-LIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 83 SMSW----ESEMIPSMLVSSSLLLKIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMILSYCIQLSNFIFIIVISSV 158
Cdd:MTH00041 81 SGSWsingPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 159 --IIGALGGLNQTSIRHLLAYSSISHLGWMISSMVASENIWEIYFTIYSLLSLILVLIFKQANLFFLNQIYTASNMKMEI 236
Cdd:MTH00041 161 svLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 237 KFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRISFSALILLYTENS-----WSLNIK 311
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSislfsWRNSGN 320
|
330 340
....*....|....*....|....*....
gi 383215329 312 NKTFNFILPMTVMISTMGLSCTSVLIFMY 340
Cdd:MTH00041 321 ITVYGVILSILSSISILGLLLIPLFLSFL 349
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
6-339 |
5.77e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 193.50 E-value: 5.77e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 6 TKLLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIQLKYSmS 85
Cdd:MTH00112 5 AKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNTG-Q 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 86 WE----SEMIPSMLVSSSLLLKIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMILSYCIQLSNFIFIIVI--SSVI 159
Cdd:MTH00112 84 WDitqlTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLaiLSTL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 160 IGALGGLNQTSIRHLLAYSSISHLGWMISSMVASENIWEIYFTIYSLLSLILVLIFKQANLFFLNQIYTASNMKMEIKFM 239
Cdd:MTH00112 164 IGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTT 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 240 MFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRISFSALILL--YTENSWSLNIKNKTFNF 317
Cdd:MTH00112 244 LMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLppNTTNMMMKWRTKPKKNT 323
|
330 340
....*....|....*....|..
gi 383215329 318 ILPMTVMISTMGLSCTSVLIFM 339
Cdd:MTH00112 324 LTATLTTLSTLLLPLSPMILTI 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
8-340 |
3.46e-55 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 183.51 E-value: 3.46e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 8 LLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSIlLIQLKYSMSW- 86
Cdd:MTH00105 7 IIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAI-IINLMYSGQWt 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 87 ---ESEMIPSMLVSSSLLLKIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMILsYCIQLS---NFIFIIVISSVII 160
Cdd:MTH00105 86 itkLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSIL-YQISPSinpNLLLTLAILSILI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 161 GALGGLNQTSIRHLLAYSSISHLGWMISSMVASENIWEIYFTIYSLLSLILVLIFKQANLFFLNQIYTASNMKMEIKFMM 240
Cdd:MTH00105 165 GGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLI 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 241 FLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRISFS-ALILLYTENSWSLNI--KNKTFNF 317
Cdd:MTH00105 245 LLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYStSLTMFPSTNNMKMKWqfENTKPMT 324
|
330 340
....*....|....*....|...
gi 383215329 318 ILPMTVMISTMGLSCTSVLIFMY 340
Cdd:MTH00105 325 LLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
10-340 |
7.76e-54 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 180.12 E-value: 7.76e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 10 FLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILL---IQLKYSMSW 86
Cdd:MTH00070 9 LLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTInawFTGEWTIMN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 87 ESEMIPSMLVSSSLLLKIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMILsycIQLS-----NFIFIIVISSVIIG 161
Cdd:MTH00070 89 MQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALL---IQIShllnsNLLIIMGLLSTLIG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 162 ALGGLNQTSIRHLLAYSSISHLGWMISSMVASENIWEIYFTIYSLLSLILVLIFKQANLFFLNQIYTASNMKMEIKFMMF 241
Cdd:MTH00070 166 GWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMM 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 242 LSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRISFSALILLY--TENSWSLNIKNKTFNFIL 319
Cdd:MTH00070 246 LTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSpnTSNSKLYWRFKNKTNNLL 325
|
330 340
....*....|....*....|.
gi 383215329 320 PMTVMISTMGLSCTSVLIFMY 340
Cdd:MTH00070 326 SLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
9-328 |
1.24e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 173.70 E-value: 1.24e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 9 LFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIQLKYSMSWES 88
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLLS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 89 EMIpsmlVSSSLLLKIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMILSYCIQLSNFIFIIVISSVIIGALGGLNQ 168
Cdd:MTH00197 82 VVL----VILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGLLICSVLSSLIGGIGGMNQ 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 169 TSIRHLLAYSSISHLGWMISSMVASENIWEIYFTIYSLLSLILVLIFKQANLFFLNQIYTASNMKMEIKFMMFLSLLSIG 248
Cdd:MTH00197 158 SNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 249 GLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRISFSALILLYTENSWSLNIKNKTFNFILPMTVMISTM 328
Cdd:MTH00197 238 GLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKINLLYSGLFILLMMMLPLL 317
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
7-329 |
1.49e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 173.53 E-value: 1.49e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 7 KLLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIqlkYSMSW 86
Cdd:MTH00144 6 NLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIM---YNLSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 87 ESEMIpsMLVSSSLLLKIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMILSYCIQLSNFIFIIVISSVI---IGAL 163
Cdd:MTH00144 83 SWFSM--SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCVISVLsalVGSI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 164 GGLNQTSIRHLLAYSSISHLGWMISSMVASENIWEIYFTIYSLLSLILVLIFKQANLFFLNQIYTASNMKMEIKFMMFLs 243
Cdd:MTH00144 161 GGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLSIISL- 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 244 LLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRISFSALIllytenSWSLNIKNKTFNFILPMTV 323
Cdd:MTH00144 240 LLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL------SSSKSKKSNSSKVLNSSII 313
|
....*.
gi 383215329 324 MISTMG 329
Cdd:MTH00144 314 SLNLLG 319
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
6-339 |
3.95e-50 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 170.53 E-value: 3.95e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 6 TKLLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILL---IQLKY 82
Cdd:MTH00200 5 ILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLnawTSGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 83 SMSWESEMIPSMLVSSSLLLKIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMILS--YCIQLSNFIFIIVISSVII 160
Cdd:MTH00200 85 GISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIqlAPALNSNILLLLGLLSVLV 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 161 GALGGLNQTSIRHLLAYSSISHLGWMISSMVASENIWEIYFTIYSLLSLILVLIFKQANLFFLNQIYTASNMKMEIKFMM 240
Cdd:MTH00200 165 GGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 241 FLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRISF-SALILLYTENSWSLNIKNKTF-NFI 318
Cdd:MTH00200 245 GLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYlTLLTLSPNQINMMSSWRTKSNsNLL 324
|
330 340
....*....|....*....|.
gi 383215329 319 LPMTVMISTMGLSCTSVLIFM 339
Cdd:MTH00200 325 VGLLLLLSILGLPLTPQLLFL 345
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
6-295 |
2.08e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 163.03 E-value: 2.08e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 6 TKLLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIQLKYSMS 85
Cdd:MTH00011 7 TMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFPSLL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 86 wesEMIPSMLVSSSLLLKIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMILSYCIQLSNFIFIIVI--SSVIIGAL 163
Cdd:MTH00011 87 ---KNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMaaMSALAGGL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 164 GGLNQTSIRHLLAYSSISHLGWMISSMVASENIWEIYFTIYSLLSLILVLIFKQANLFFLNQIYTASNMKMEIKFMMFLS 243
Cdd:MTH00011 164 GGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIM 243
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 383215329 244 LLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRISFS 295
Cdd:MTH00011 244 LLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFN 295
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
9-295 |
1.45e-46 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 161.13 E-value: 1.45e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 9 LFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILL---IQLKYSMS 85
Cdd:MTH00135 8 ILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTnawLTGQWDIQ 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 86 WESEMIPSMLVSSSLLLKIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMmILSYCIQLSNFIFIIVI--SSVIIGAL 163
Cdd:MTH00135 88 QMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPF-ALILQIAPTNPTLLITLglTSTLVGGW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 164 GGLNQTSIRHLLAYSSISHLGWMISSMVASENIWEIYFTIYSLLSLILVLIFKQANLFFLNQIYTASNMKMEIKFMMFLS 243
Cdd:MTH00135 167 GGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPLI 246
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 383215329 244 LLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRISFS 295
Cdd:MTH00135 247 LLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYA 298
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
16-316 |
8.40e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 94.71 E-value: 8.40e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 16 MGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMIN-ESSIKYFIVQAMASTMLLFSI----------------LLI 78
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSaEAGLKYFVLGALSSGLFLFGCallcgttgglhlsyinLVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 79 QLKYSMSWESEMIPSMLVSSSLLLKIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMILSYCIQLSNFIFIIVISSV 158
Cdd:MTH00196 84 NSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLIGGLFSL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 159 IIGALGGLNQTSIRHLLAYSSISHLGWMISSMV----ASENIWEIYFTIYSLLSLILVLIFKQANlFFLNQIYTASNMKM 234
Cdd:MTH00196 164 FVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEigsfESIQASLVYLFIYIIMSICVFSIILALN-VYKNLIIEFSGLSR 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 235 EIKFM---MFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRIsfsaLILLYTENSWSLNIK 311
Cdd:MTH00196 243 RLPILaitLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI----VKILFFQANSFLLIS 318
|
....*
gi 383215329 312 NKTFN 316
Cdd:MTH00196 319 TKILK 323
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
24-282 |
1.37e-21 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 92.76 E-value: 1.37e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 24 SNSWFGVWMGLEINLLSFIPMLTNNKNSMI-NESSIKYFIVQAMASTMLLFSILLI--------------QLKYSMSWES 88
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRsSEAGMKYFLLTLLGSSILLFGISLMynytgtlsfdelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 89 EMIPSMLVSSSLLLKIGAAPFHFWFPEVMGTSEWLN-CLMLMTWQKIAPMMIL-------SYCIQLSNFIFIIVISSVII 160
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVsALLAATLVKAGGYGLIrrsllylPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 161 GALGGLNQTSIRHLLAYSSISHLGWMISSMVASENIWEIYFTIYSLL-SLILVLIFKQANLFFLNQIYTASN-------M 232
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLThGLFSAGLFLCAGSVIYRRVHTRNIrdygglaK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 383215329 233 KMEIKFM-MFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLT 282
Cdd:pfam00361 241 TMPILALvFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-292 |
1.46e-20 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 92.10 E-value: 1.46e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 8 LLFLSTLmmGTILSISSNSWFGVWMGLEINLLSF---IPMLTNNKNSmiNESSIKYFIVQAMASTMLLF----------S 74
Cdd:COG1007 107 LLLFATL--GMMLMASANDLLTLFLGLELLSLSLyvlVAFRRDDRRS--SEAALKYFLLGALSSGFLLYgisllygatgS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 75 ILLIQLKYSMSWESEMIPSMLVSSSLLL-----KIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMIL--------- 140
Cdd:COG1007 183 LNLAGIAAALAAGGANSPLLLLGLVLVLaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALlrllveafp 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 141 SYCIQLSNFIFIIVISSVIIGALGGLNQTSIRHLLAYSSISHLGWMISSMVA-SENIWE---IYFTIYSLlslilvlifk 216
Cdd:COG1007 263 GLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAgTPLGVSaalFYLLAYLF---------- 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 217 qANL---FFLNQIYTASNMKMEIK-------------FMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVM 280
Cdd:COG1007 333 -MNLgafAVILLLSRKGGEAEEIEdlaglarrspllaLAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVL 411
|
330
....*....|..
gi 383215329 281 LTMITLYYYLRI 292
Cdd:COG1007 412 NSVISAYYYLRV 423
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
16-316 |
3.68e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 87.76 E-value: 3.68e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 16 MGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMIN-ESSIKYFIVQAMASTMLLFSILLIqlkYSMSWE------- 87
Cdd:MTH00199 108 LGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYStEAGLKYFVLGAVSSGLFLFGCALL---YGLTGEtsiqgin 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 88 ---SEMIPSMLVSSSLLLKIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMILSYCIQLSNFIFIIVISSVIIGALG 164
Cdd:MTH00199 185 silTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLICAVLSIIYGAIG 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 165 GLNQTSIRHLLAYSSISHLGWMI--------SSMVASeniwEIYFTIYSLLSLILVLIFKQANLF--FLNQIYTASNMKM 234
Cdd:MTH00199 265 ALNQTKIKRLLAYSGIGHMGFILfgvaigsfESIQAS----LIYMIIYVIMSICSFSIILSLKLTkgLIVEVSGLSRKNP 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 235 EIKFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRIsfsaLILLYTENSWSLNIKNKT 314
Cdd:MTH00199 341 VIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV----VQIIYFQADYSILIWQKV 416
|
..
gi 383215329 315 FN 316
Cdd:MTH00199 417 LK 418
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
8-292 |
6.68e-18 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 84.10 E-value: 6.68e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 8 LLFLSTLmmGTILSISSNSWFGVWMGLEI-NLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIQLkYSMSW 86
Cdd:PRK05777 108 LVLFALL--GMMVMVSANDLLTLFLGLELlSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYG-ATGSL 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 87 ESEMIPSMLVSSSLLL----------------KIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMIL---------S 141
Cdd:PRK05777 185 SFAGIAKALADGSGNSllllfglvfllvglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLlrllvvafgG 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 142 YCIQLSNFIFIIVISSVIIGALGGLNQTSIRHLLAYSSISHLGWMISSMVASENIWE----IYFTIYSLL--------SL 209
Cdd:PRK05777 265 LSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsavlFYLLAYLFMtlgafgviSL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 210 ILVLIFKQANLFFLNQIYTASNMkmeIKFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYY 289
Cdd:PRK05777 345 LRRKGGEAESISDFAGLSKRSPL---LAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYY 421
|
...
gi 383215329 290 LRI 292
Cdd:PRK05777 422 LRV 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
8-330 |
5.42e-16 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 78.45 E-value: 5.42e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 8 LLFLSTLmmGTILSISSNSWFGVWMGLEI-NLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLI-------- 78
Cdd:TIGR01770 107 LLLFALL--GIFLLVSSNDLLSIYLGLELqSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIygftgsln 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 79 --QLKYSMSWESEMIPSMLVSSSLLL-----KIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIA---PMMILSYCIQ--- 145
Cdd:TIGR01770 185 feDLLLFLSNGMLNISLLLLGIVLILvgllfKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAifaVFLRLFLYILfgf 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 146 ---LSNFIFIIVISSVIIGALGGLNQTSIRHLLAYSSISHLGW-MISSMVASENIWE---IYFTIYSLLSLILVLIFKQA 218
Cdd:TIGR01770 265 seaWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYiLIGLLAGTLEGIKavlFYIFIYALMSLGAFGVLSLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 219 NLFFLNQIYTASNMKMEIK------FMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRI 292
Cdd:TIGR01770 345 RSYKDEWIEYISDFAGLFKtnpilaILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
330 340 350
....*....|....*....|....*....|....*...
gi 383215329 293 sfSALILLYTENSWslnIKNKTFNFILPMTVMISTMGL 330
Cdd:TIGR01770 425 --VKVMYFDKPERR---IPSNPQSKAQSLLLSISALFI 457
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
10-292 |
3.66e-12 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 66.71 E-value: 3.66e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 10 FLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFSILLIQLKY---SMSW 86
Cdd:COG0651 112 LFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATgtlNMAD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 87 ESEMIPSMLVSSSLL----------LKIGAAPFHFWFPEVMGT-----SEWLNCLMLmtwqKIAPMMILSYCIQLSNFIF 151
Cdd:COG0651 192 LAARLAELDPGLLLAafalllvgfgIKAALFPLHFWLPDAYPAapspvSALLSGLLT----KVGVYAILRVLTLLFGADP 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 152 IIVISSVII---------GALGGLNQTSIRHLLAYSSISHLGWM---ISSMVASENIWEIYFTIysllsliLVLIFKqAN 219
Cdd:COG0651 268 ALFLGTLLLvlglltmlvGALGALAQRDLKRLLAYSSVSQIGYIllgLGLGTPLGLAGALFHLL-------NHALAK-AL 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 220 LFFL--NQIYTASNMKME-----------IKFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITL 286
Cdd:COG0651 340 LFLAagAIERATGTRDLDklgglgkrmplTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTL 419
|
....*.
gi 383215329 287 YYYLRI 292
Cdd:COG0651 420 AYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
16-292 |
6.75e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 66.42 E-value: 6.75e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 16 MGTILSISSNSWFGVWMGLEINLLSFIPM---------LTNNKNSMINESSIKYFIVQAMASTMLLFSILL--------- 77
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILagegsqpgsHFPSPGNTPPESGLKYWILGAMSSGFYLFGCALyfgftgneg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 78 -IQLKYSMSWESEMIPS-------MLVSSSLLLKIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIAPMMILSYCIQLSNF 149
Cdd:MTH00198 279 mLGTILSATLETTNIELrqgslgyLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLVITSKL 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 150 IFIIVISSVIIGALGGLNQTSIRHLLAYSSISHLGWMISSMVAS-----ENIWeIYFTIYSLLSLILVLIF--------- 215
Cdd:MTH00198 359 LLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGtyeslQASW-TYAVTYLVSALASFTVIctleefgtr 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 216 ------KQANLFFLNQI------YTASNMKMEIKFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVI------ 277
Cdd:MTH00198 438 tptsrqRDGSFGNYNLVrrlvdlTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIyylval 517
|
330
....*....|....*.
gi 383215329 278 -MVMLTMITLYYYLRI 292
Cdd:MTH00198 518 fAIICTCISAFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
161-292 |
9.34e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 50.26 E-value: 9.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 161 GALGGLNQTSIRHLLAYSSISHLGWMISsMVASENIWEIYFTIYSLLSLIlvliFKQANLFF-LNQIYTASNMK------ 233
Cdd:PRK08375 285 GSLAALGQDDVKRVLAYSTVSQMGYILL-GLALLTPLALAAGLLHLLHHA----LMKGALFLaAGAIEVTYGTRrlsels 359
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 383215329 234 -----MEIKFMMFLSL-LSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRI 292
Cdd:PRK08375 360 glgrrMPLTAAAFAVAsLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRI 424
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
238-295 |
3.24e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 45.41 E-value: 3.24e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 383215329 238 FMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRISFS 295
Cdd:PRK06277 365 FMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFYL 422
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
161-296 |
1.02e-04 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 43.79 E-value: 1.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 161 GALGGLNQTSIRHLLAYSSISHLGWMISSmVASENIWEIYFTIYSLLSLILVLIFkqanLFFLNQIYTASNMKMEIKFM- 239
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFILLG-LALGTPAGINGAIFYLVHDMVVKTA----LFLIAGSLVRLTGYRSLQYLg 360
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 383215329 240 ------------MFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRISFSA 296
Cdd:PRK12663 361 glyrkeplfgalFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRIFFLA 429
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
161-295 |
1.67e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 43.42 E-value: 1.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 161 GALGGLNQTSIRHLLAYSSISHLGW-MISSMVASEniweiyFTIYSLLSLILVLIFKQANLF-----FLNQIYTASNMKM 234
Cdd:PRK12667 309 GALMMVVQKDVKRLLAYSTISHMGYiFMGIGIGTQ------LGLAAALFHIINHAIAKSLLFlasgvFIHAAGTRDIDEL 382
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 383215329 235 E--------IKFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRISFS 295
Cdd:PRK12667 383 AglgrkmpiASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
108-298 |
1.96e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 43.11 E-value: 1.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 108 PFHFWFPEVMGT----SEWLNCLMLMtwqKIAPMMILSYCIQLSNFIF------IIVISSVIIGALGGLNQTSIRHLLAY 177
Cdd:PRK12650 226 PFHFWLPEAMAAitpvSAFLHAAAVV---KAGIYLLLRFSPVFHDVAVwnwlliIVGMITALMGAVFAVQKTDLKKLTAY 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 178 SSISHLGWmissMVASENIWEIYFTIYSLLSLILVLIFKQAnLFFL-----NQIYT-------ASNMKMEIKF-MMFLSL 244
Cdd:PRK12650 303 STVSQLGW----IVATIGVGTPFALTAAVVHTLAHALFKSS-LFMLigvvdHQAGTrdirrlgSLWRRMPFTFvSVTIAA 377
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 383215329 245 LSIGGLPPFIGFLPKWMVMQSMME-----MNMTGLMVIMVMLTMITLYYYLRISFSALI 298
Cdd:PRK12650 378 LSMAAVPPLFGFVSKEGMLTAFLEapggnAGVVLLLVGAALGAVFTFAYSARLVLGAFV 436
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
161-292 |
2.31e-04 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 42.68 E-value: 2.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 161 GALGGLNQTSIRHLLAYSSISHLGWMISSMVA--SENIWEIYFTIYSLLSLILVLIFKQANLFFL----NQIYTASNMKM 234
Cdd:CHL00049 294 GNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVgdSNDGYASMITYMLFYIFMNLGTFACIVLFGLrtgtDNIRDYAGLYT 373
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 383215329 235 EIKFMMF---LSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRI 292
Cdd:CHL00049 374 KDPFLALslaLCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-340 |
2.55e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 42.50 E-value: 2.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 2 DNNSTKLLFLSTLMMGTILSISSNSWFGVWMGLEINLLSFIPMLTNNKNSMINESSIKYFIVQAMASTMLLFS--ILLIQ 79
Cdd:PRK06589 113 DSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPavILIYT 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 80 LKYSMSWESEMI----PSMLVSSSLLLKIGAA---PFHFWFPEVMGTSEWLNCLM---------LMTWQKIAPMM----I 139
Cdd:PRK06589 193 KTGNLDFVSGGLfsknQSIILLLMFIYGIAKTaifPVHSWLPAAMVAHYPVSALLhavivvktgLFCIYKILLYIfglsY 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 140 LSYCIQLSNFIFIIVISSVIIGALGGLNQTSIRHLLAYSSISHLGWMISSMVASENiweiyFTIYSLLSLILVLIFKQAN 219
Cdd:PRK06589 273 LQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTP-----KALGAAILHLVSHSFAKIC 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 220 LFF-------------LNQIYTASNMKMEIKFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVML----T 282
Cdd:PRK06589 348 LFYsmgsiyslkkedqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVviasS 427
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 383215329 283 MITLYYYLRISFSALILLYTENSwslNIKNktfnfILPMTVMISTMGLSCTSVLIFMY 340
Cdd:PRK06589 428 ILSALYLLKILSSIYKPSLSENS---FITK-----SLPYLMQISVITCCCALTLFYFI 477
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-330 |
4.77e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 42.01 E-value: 4.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 55 ESSIKYFIVQAMASTMLLFSILLIQLKY---SMSW----------ESEMIPSMLVSSSLLLKIGAAPFHFWFPEVMGTSE 121
Cdd:PRK08376 172 EAGIKYMFVGSLASSMVLLGIALLYGQYgtlNMAYlavkmsenptVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAP 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 122 WLNCLMLMTWQKIAPMMILSYCIQLSNFIFIIVISSVIIGALGGLN----------QTSIRHLLAYSSISHLGWMI---- 187
Cdd:PRK08376 252 SSISAMLLVIKQAGLYALARVLFSIYGPAINLATVGWVIIILGCLTmfvgvamavvQKDVKRLLAYHSVSQIGYMLlglg 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 188 -----SSMVASENIWEI-----YFTIYSLLSLILVLIFKQANLFF------LNQIY-TASNMKMEIkFMMFLSLLSIGGL 250
Cdd:PRK08376 332 vglaaLGDPAMASYGEIalaggIYHIVNHALYKALLFLTAGAVIYetgtrnLNELGgLARTMPKTT-IAFLIGAAAIVGL 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 251 PPFIGFLPKWMVMQSMMEMNMTgLMVIMVMLTMITLYYYLRISFSAliLLYTENSWSLNIKNKTFNFILPM---TVMIST 327
Cdd:PRK08376 411 PPFNGFASKWLIYESSALFNPI-LGVIAMIGSVLTLASFVKVFHTA--FFGPPSEKVMNVKEPPKPMLVPMlilAIAIIG 487
|
...
gi 383215329 328 MGL 330
Cdd:PRK08376 488 MGL 490
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
103-308 |
9.46e-04 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 40.80 E-value: 9.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 103 KIGAAPFHFWFPEVMGTSEWLNCLMLMTWQKIA----PMMILSYCI-----QLSNFIFIIVISSVIIGALGGLNQTSIRH 173
Cdd:PRK02504 223 KISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFpsfdeQWKLLFTALAILSMVLGNVVALAQTSMKR 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 174 LLAYSSISHLGW-MI----------SSMVaseniweIYFTIYSLLSLILvliFKQANLFFL----NQIYTASNMKME--- 235
Cdd:PRK02504 303 MLAYSSIGQAGFvMIglvagteagyASMV-------FYLLAYLFMNLGA---FACVILFSLrtgtDQISDYAGLYQKdpl 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 236 IKFMMFLSLLSIGGLPPFIGFLPKWMVMQSMMEMNMTGLMVIMVMLTMITLYYYLRI----------SFSALILLYTENS 305
Cdd:PRK02504 373 LTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIRVikmmvvkepqEMSDVVKNYPEIN 452
|
...
gi 383215329 306 WSL 308
Cdd:PRK02504 453 WNL 455
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
161-265 |
2.79e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 39.57 E-value: 2.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383215329 161 GALGGLNQTSIRHLLAYSSISHLGWMISSMVASENIW---EIYFTIYSLLSlilvlifkQANLFFL-----NQIYTASNM 232
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGlsgAIYYVAHHITV--------QTTLFLVvglieRQAGSSSLR 358
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 383215329 233 KME--------IKFMMFLSLLSIGGLPPFIGFLPKWMVMQS 265
Cdd:PRK12665 359 RLGglakasplLAVLFFVPALNLGGIPPFSGFIGKVALLEA 399
|
|
| |
