|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 677.83 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 1 MLKILIPTLMLVPATWLVPIKWLWPTTLTHSLLIALASINWFKNPSETGWTFLSSYMATDPLSTPLLILTCWLLPLMILA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 81 SQNHTAPGPTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 161 LLVALLLLQNSTGTLSILTLQFSNPLPLSTLADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 241 GYGMMRILPVLEPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 321 GLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLFTGTG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 380448774 401 TLITAGYSLHMFLTTQRGPLSTHIIALEPSHSREHLLVALHLLPLALLILKPHLITGWT 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 657.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 1 MLKILIPTLMLVPATWLVPIKWLWPTTLTHSLLIALASINWFKNPSETgWTFLSSYMATDPLSTPLLILTCWLLPLMILA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSET-MNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 81 SQNHTAPGPTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 161 LLVALLLLQNSTGTLSILTLQFSNPLPLSTLADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 241 GYGMMRILPVLEPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 321 GLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLFTGTG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 380448774 401 TLITAGYSLHMFLTTQRGPLSTHIIALEPSHSREHLLVALHLLPLALLILKPHLITGW 458
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 644.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 1 MLKILIPTLMLVPATWLVPIKWLWPTTLTHSLLIALASINWFKNPSETGwTFLSSYMATDPLSTPLLILTCWLLPLMILA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 81 SQNHTAPGPTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 161 LLVALLLLQNSTGTLSILTLQFSNPLPLSTLADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 241 GYGMMRILPVLEPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 321 GLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLFTGTG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 380448774 401 TLITAGYSLHMFLTTQRGPLSTHIIALEPSHSREHLLVALHLLPLALLILKPHLITGW 458
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 625.76 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 1 MLKILIPTLMLVPATWLVPIKWLWPTTLTHSLLIALASINWFKNPSETGWTFlSSYMATDPLSTPLLILTCWLLPLMILA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNF-SLLFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 81 SQNHTAPGPTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 161 LLVALLLLQNSTGTLSILTLQFSNPLPLSTLADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 241 GYGMMRILPVLEPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 321 GLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLFTGTG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 380448774 401 TLITAGYSLHMFLTTQRGPLSTHIIALEPSHSREHLLVALHLLPLALLILKPHLITGWT 459
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPT 458
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-434 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 528.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 3 KILIPTLMLVPATWLVPIKWLWPTTLTHSLLIALASINWFKNPSETGWTFLSSYMATDPLSTPLLILTCWLLPLMILASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 83 NHTAPGPTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 163 VALLLLQNSTGTLSILTLQFSnplPLSTLADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFS---KLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 243 GMMRILPVLEPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 323 TSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLFTGTGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430
....*....|....*....|....*....|..
gi 380448774 403 ITAGYSLHMFLTTQRGPLSTHIIALEPSHSRE 434
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTRE 429
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-434 |
6.27e-167 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 477.93 E-value: 6.27e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 1 MLKILIPTLMLVPATWLVPIKWLWPTTLTHSLLIALASINWFKNPSETGWTFLSSYMATDPLSTPLLILTCWLLPLMILA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 81 SQNHTAPGPTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 161 LLVALLLLQNSTGTLSILTLQFSNPLPLSTLADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 241 GYGMMRILPVL-EPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIA 319
Cdd:MTH00044 241 GYGLIRLINLFsLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 320 HGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLFTGT 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430
....*....|....*....|....*....|....*
gi 380448774 400 GTLITAGYSLHMFLTTQRGPLSTHIIALEPSHSRE 434
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSRE 435
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-434 |
8.54e-128 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 377.57 E-value: 8.54e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 1 MLKILIPTLMLVPATWLVPIKWLwpttlTHSLLIALASINWFKNPSETGWTFLSSYMATDPLSTPLLILTCWLLPLMILA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 81 SQNHTAPGptNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SESVYKKN--NYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 161 LLVALLLLQNSTGTLSILTLQFSNPLplstlaDKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFLLNFFGSL------NFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 241 GYGMMRILPVLEPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 321 GLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLFTGTG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410 420 430
....*....|....*....|....*....|....
gi 380448774 401 TLITAGYSLHMFLTTQRGPLSTHIIALEPSHSRE 434
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVRE 421
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-434 |
1.03e-125 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 371.48 E-value: 1.03e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 49 GWTFLSSYMATDPLSTPLLILTCWLLPLMILASQNHTapGPTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLI 128
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSV--KLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 129 PTLFLITRWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSILtlqFSNPLPLSTLADKLWWAGCLLAFLVKM 208
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFML---LISSLRKLLSSMGLWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 209 PLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIA 288
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 289 YSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANL 368
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 380448774 369 ALPPLPNLMGELMIITSLFNWSGWTLLFTGTGTLITAGYSLHMFLTTQRGPLSTHIIALEPSHSRE 434
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSE 392
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-458 |
9.30e-117 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 349.81 E-value: 9.30e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 1 MLKILIPTLMLVPATwLVPIKWLWPTTLTHSLLIALASINWFKNPSeTGWTFLSSYMATDPLSTPLLILTCWLLPLMILA 80
Cdd:MTH00014 1 MLKLIMPLISLLLLP-LIKYPWSWALTFSTLLLLSLFTLLNLYPMS-APYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 81 S----QNHTAPgptnrqRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLA 156
Cdd:MTH00014 79 SfkifQNNKAP------KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 157 GSLPLLVALLLLQNSTGTLSILTLQFSNPLPLSTladKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVL 236
Cdd:MTH00014 153 ASLPLLMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGIL 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 237 LKLGGYGMMRILPVLEPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALIL 316
Cdd:MTH00014 230 LKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAM 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 317 MIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLF 396
Cdd:MTH00014 310 MIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAIL 389
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 380448774 397 TGTGTLITAGYSLHMFLTTQRGPLSTHIIALEPSHSREHLLVALHLLPLALLILKPHLITGW 458
Cdd:MTH00014 390 LAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
28-434 |
8.93e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 334.26 E-value: 8.93e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 28 LTHSLLIALASINWFKNPSETGWTFLSSYMATDPLSTPLLILTCWLLPLMILASQNHTAPgpTNRQRMYITLLTSLQIFL 107
Cdd:MTH00205 24 FSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKS--NKNSKLFTVSVIMLLLIL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 108 ILAFSATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSILtlqFSNPLP 187
Cdd:MTH00205 102 ILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMF---FNFPLN 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 188 LSTLADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLTKDLIYPFIIFAL 267
Cdd:MTH00205 179 FSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 268 WGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILAR 347
Cdd:MTH00205 259 WGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNK 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 348 GLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLFTGTGTLITAGYSLHMFLTTQRGPLSTHIIAL 427
Cdd:MTH00205 339 GVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSF 418
|
....*..
gi 380448774 428 EPSHSRE 434
Cdd:MTH00205 419 LAISERE 425
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
9-434 |
3.33e-88 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 277.35 E-value: 3.33e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 9 LMLVPATWLVPIKWLWPTTLTHSLLIALASINWFkNPSETGWTFLSSY-----------MATDPLSTPLLILTCWLLPLM 77
Cdd:COG1008 20 LLLLPRRNARLARWVALAVSLLTLLLSLYLLAGF-DPGTGGFQFVESYpwipslgisyhLGVDGISLPLVLLTALLTPLA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 78 ILASQNHtapgPTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRWGNqAERLNAGTYFLFYTLAG 157
Cdd:COG1008 99 ILASWNE----IKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG-ERRIYAAIKFFLYTLAG 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 158 SLPLLV--ALLLLQNSTGTLSILTLQfsnPLPLSTLADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAV 235
Cdd:COG1008 174 SLLMLVaiLALYFLAGALTFDIAELA---AAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGV 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 236 LLKLGGYGMMRI-LPVLEPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGAL 314
Cdd:COG1008 251 LLKMGGYGLLRFaLPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAV 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 315 ILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTL 394
Cdd:COG1008 331 LQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLA 410
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 380448774 395 LFTGTGTLITAGYSLHMFLTTQRGPLSTHIIALEPSHSRE 434
Cdd:COG1008 411 ILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRE 450
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
9-434 |
1.21e-83 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 265.91 E-value: 1.21e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 9 LMLVPATWLVPIKWLwpTTLTHSLLIALASINWFK-NPSETGWTFLSSY-----------MATDPLSTPLLILTCWLLPL 76
Cdd:PRK05846 20 VLLTERFGARLARWI--ALIGTLLTLLLSLVLWIGfDSSNAGFQFVEKHpwiprfgisyhLGVDGISLLLVVLTALLTPL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 77 MILASQNHTapgpTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRWGnQAERLNAGTYFLFYTLA 156
Cdd:PRK05846 98 AVLASWEEI----KKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG-GKNRIYAATKFFLYTLL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 157 GSLPL----LVALLLLQNSTGTLSILTLQfsnPLPLSTLADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMIL 232
Cdd:PRK05846 173 GSLLMlvaiIYLVVVYYNATGTFDIADLL---NLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLL 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 233 AAVLLKLGGYGMMRI-LPVLEPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFT 311
Cdd:PRK05846 250 AGILLKMGAYGLLRFsLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQ 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 312 GALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSG 391
Cdd:PRK05846 330 GAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNP 409
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 380448774 392 WTLLFTGTGTLITAGYSLHMFLTTQRGPLSTHIIALEPSHSRE 434
Cdd:PRK05846 410 VIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRE 452
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-426 |
5.34e-78 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 250.63 E-value: 5.34e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 57 MATDPLSTPLLILTCWLLPLMILASQnhtaPGPTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITR 136
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASW----ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 137 WGNQaERLNAGTYFLFYTLAGSLPLLVALLLLQNSTG-TLSILTLqfsNPLPLSTLADKLWWAGCLLAFLVKMPLYGVHL 215
Cdd:TIGR01972 149 WGGP-NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLEL---LNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 216 WLPKAHVEAPIAGSMILAAVLLKLGGYGMMRI-LPVLEPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGH 294
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 295 MGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLP 374
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 380448774 375 NLMGELMIITSLFNWSGWTLLFTGTGTLITAGYSLHMFLTTQRGPLSTHIIA 426
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVA 436
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
56-425 |
1.20e-72 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 236.88 E-value: 1.20e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 56 YMATDPLSTPLLILTCWLLPLMILASQNHTapgpTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLIT 135
Cdd:MTH00204 78 VFAVDGVSLFFILLTTLLIPICILISWKSI----KFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIG 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 136 RWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSILTLqFSNPLPLSTlaDKLWWAGCLLAFLVKMPLYGVHL 215
Cdd:MTH00204 154 IWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQIL-LNIKLPLSI--QKWLLVGFFLSLAVKIPQIPFHI 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 216 WLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLTKDLIYPFII-FALWGVIMTGLICLRQTDLKSLIAYSSVGH 294
Cdd:MTH00204 231 WLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLIAYSSVAH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 295 MGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLP 374
Cdd:MTH00204 311 MGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSC 390
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 380448774 375 NLMGELMIITSLFNWSGWTLLFTGTGTLITAGYSLHMFLTTQRGPLSTHII 425
Cdd:MTH00204 391 NFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLL 441
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
5.76e-68 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 218.72 E-value: 5.76e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 113 ATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSILTLQFSNPLPLSTLA 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 193 DKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLTKDLIYPFIIFALWGVIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 273 TGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLA-NTNYERTHSRTMILARGLQV 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 380448774 352 ALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLFTGTGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
52-412 |
1.57e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 220.69 E-value: 1.57e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 52 FLSSYMATDPLSTPLLILTCWLLPLMILASQNhtapGPTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTL 131
Cdd:MTH00217 71 FGPVVFAVDGISIFFLILTALLTPICILISWN----SIKFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMF 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 132 FLITRWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTL---SILTLQFSNPLplstlaDKLWWAGCLLAFLVKM 208
Cdd:MTH00217 147 LIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTdyqALCCLKIEKEL------QYFIFLGFFLSLAIKI 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 209 PLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLTKDLIYPFI-IFALWGVIMTGLICLRQTDLKSLI 287
Cdd:MTH00217 221 PKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRII 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 288 AYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLAN 367
Cdd:MTH00217 301 AYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLAN 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 380448774 368 LALPPLPNLMGELMIITSLFNWSGWTLLFTGTGTLITAGYSLHMF 412
Cdd:MTH00217 381 ASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
17-410 |
1.61e-66 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 221.33 E-value: 1.61e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 17 LVPIKWLWPTTLTHSLLIALASINWFKNPSETGWTFLSSYM--ATDPLSTPLLILTCWLLPLMILASQNHTapgpTNRQR 94
Cdd:MTH00226 56 LISTIILWLSLDQEGGFTPLMDIDWIEGPEKIIPIIMGGPLvfAVDGISIYFIILTGFIVPCSILISWHSV----KYLTK 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 95 MYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGT 174
Cdd:MTH00226 132 SFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGT 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 175 LSILTLQFSNPLPLSTLADKLWwAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRI-LPVLEP 253
Cdd:MTH00226 212 TDYLTLASCSHVVSEQTQKWIF-LGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLsWPILPL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 254 LTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANT 333
Cdd:MTH00226 291 GAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTI 370
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 380448774 334 NYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLFTGTGTLITAGYSLH 410
Cdd:MTH00226 371 LYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-405 |
1.19e-50 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 179.07 E-value: 1.19e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 57 MATDPLSTPLLILTCWLLPLMILASQNhtapgPTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITR 136
Cdd:PRK12561 55 LGVDGLSMPLVLLSGLITTLSIFASWK-----VTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 137 WGNQaERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSI----LTLQfSNPLPLSTLAdklwWAGCLLAFLVKMPLYG 212
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFdlaeLGAK-SYPLALELLL----YAGFLIAFGVKLPIFP 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 213 VHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRIlpVLEPLTKDLIYPFIIFALWGV---IMTGLICLRQTDLKSLIAY 289
Cdd:PRK12561 204 LHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRF--NVQMLPDAHVYFAPALAILGVvniIYGALNAFAQDNVKRRLAY 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 290 SSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLA 369
Cdd:PRK12561 282 SSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLA 361
|
330 340 350
....*....|....*....|....*....|....*.
gi 380448774 370 LPPLPNLMGELMIITSLFNWSGWTLLFTGTGTLITA 405
Cdd:PRK12561 362 LPGMSGFVSELTVFLGITSSDVYSSTFRTITILLAA 397
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
99-409 |
6.02e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 164.31 E-value: 6.02e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 99 LLTSLQIFLILAFSATE-VIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLPLLVALLllqNSTGTLSI 177
Cdd:MTH00094 66 ILSNLLILICLLFFVSSnMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL---KNFFFFSL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 178 LTLQFSNPLPLSTLadklwwagCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLtkd 257
Cdd:MTH00094 143 CYFDFFLSWEMFFI--------LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV--- 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 258 LIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYER 337
Cdd:MTH00094 212 YNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHI 291
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 380448774 338 THSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLFTGTGTLITAGYSL 409
Cdd:MTH00094 292 SKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSL 363
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
60-416 |
5.47e-45 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 162.24 E-value: 5.47e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 60 DPLSTPLLILTCWLLPLMILASQNHTAPGPtnRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITrWGN 139
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 140 QAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSILTLQFSNPLpLSTLADKLWWAGCLLAFLVKMPLYGVHLWLPK 219
Cdd:COG0651 152 TKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAE-LDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 220 AHVEAPIAGSMILAAVLLKLGGYGMMRILPVL--EPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGL 297
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 298 VVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLM 377
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 380448774 378 GELMIITSLFNWSGWTLLFTG-TGTLITAGYSLHMFLTTQ 416
Cdd:COG0651 391 SKWLLLQAALEAGAWLLAAVLlLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-411 |
7.27e-42 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 155.63 E-value: 7.27e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 59 TDPLSTPLLILTCWLLPLMILAsqnhtAPGPTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRWG 138
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLA-----AWPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWG 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 139 NQaERLNAGTYFLFYTLAGSLPLLvallllqnstgtLSILTLQFSNPLP---LSTLADK--------LWWAGCLLAFLVK 207
Cdd:PRK02546 160 GK-KRQYAATKFILYTAGSSLFIL------------LAALAMAFYGDTPtfdMTALAAKdfglgfqlLCYAGLLIAYGVK 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 208 MPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLTKDLIYP-FIIFALWGVIMTGLICLRQTDLKSL 286
Cdd:PRK02546 227 LPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRK 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 287 IAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLA 366
Cdd:PRK02546 307 IAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLA 386
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 380448774 367 NLALPPLPNLMGELMIITSLFNWSGWTLLF-------TGTGTLITAGYSLHM 411
Cdd:PRK02546 387 SLALPGMSGFVAELMVFVGFATSDAYTLPFrvvvvflAAVGVILTPIYLLSM 438
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
60-411 |
5.86e-41 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 152.79 E-value: 5.86e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 60 DPLSTPLLILTCWLLPLMILASQnhtaPGPTNRQRMYITLLT--SLQIFLilaFSATEVIMFYVMFEATLIPTLFLITRW 137
Cdd:CHL00011 83 DGLSIGPILLTGFITTLATLAAW----PVTRNSRLFYFLMLAmySGQIGL---FSSRDLLLFFIMWELELIPVYLLLSMW 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 138 GNQaERLNAGTYFLFYTLAGSLPLLvallllqnstgtLSILTLQFSNP----LPLSTLADK--------LWWAGCLLAFL 205
Cdd:CHL00011 156 GGK-KRLYSATKFILYTAGGSIFLL------------IGVLGMGLYGSneptLNFETLANQsypvaleiLFYIGFLIAYA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 206 VKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLTKDLIYPF-IIFALWGVIMTGLICLRQTDLK 284
Cdd:CHL00011 223 VKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLK 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 285 SLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERThsRTMILAR--GLQVALPLMGTWWFF 362
Cdd:CHL00011 303 KRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSS 380
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 380448774 363 ASLANLALPPLPNLMGELM----IITS---LFNWSGWTLLFTGTGTLITAGYSLHM 411
Cdd:CHL00011 381 FSMASLALPGMSGFVAELIvffgIITSqkyLLMPKILITFVMAIGMILTPIYLLSM 436
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
53-459 |
5.98e-39 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 147.15 E-value: 5.98e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 53 LSSYMATDPLSTPLLILTCWLLPLMILASQNHTapgptNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLF 132
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSDESI-----QRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 133 LITRWGNQaERLNAGTYFLFYT-LAGSLPLLVALLLLQNSTGTLSILTLQFSNPLPLSTlaDKLWWAGCLLAFLVKMPLY 211
Cdd:PRK06473 146 LIAIWGGQ-RRGYAATKFLLYTaISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLST--QLLLLAPILVGFGIKIPLV 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 212 GVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLTKDLIYPFIifALWGVI--MTGLIC-LRQTDLKSLIA 288
Cdd:PRK06473 223 PFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWL--ATWAVVsvLYGASCaIAQKDMKKMVA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 289 YSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGL---QVALPLMGTWWFFASL 365
Cdd:PRK06473 301 YSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVM 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 366 ANLALPPLPNLMGELMIITSLFNWSGWTLLFTGTGTLITAGYSLHMFLTTQRGPLSTHIIALEPSHSREHLLVALHLLPL 445
Cdd:PRK06473 381 ASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVLWSERLPALVLAVLI 460
|
410
....*....|....
gi 380448774 446 ALLILKPHLITGWT 459
Cdd:PRK06473 461 VVLGIQPSWLVRWT 474
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
9.80e-34 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 122.63 E-value: 9.80e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 1 MLKILIPTLMLVPATWLVPIKWLWPTTLTHSLLIALASINWFKNPSETGWTFLSSYMATDPLSTPLLILTCWLLPLMILA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 380448774 81 SQNHTAPGPTNRQRMYITLLTSLQIFLILA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
53-387 |
1.74e-27 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 114.81 E-value: 1.74e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 53 LSSYMATDPLSTPLLILTCWLLPLMILASQNHTapgptNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLF 132
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLNSLLTWIAIYSIGENT-----ERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 133 LITRWGNQaERLNAGTYFLFYT-LAGSLPLLVALLLLQNSTGTLSILTLQFSNPLPLSTlaDKLWWAGCLLAFLVKMPLY 211
Cdd:PRK07363 146 LIAIWGGE-KRGYASIKFLIYTaVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNT--QLILLTGLLLGFGIKIPLV 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 212 GVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLTKDLIYPfiIFALWG---VIMTGLICLRQTDLKSLIA 288
Cdd:PRK07363 223 PLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGtisVIYGALSAIAQKDIKRMVA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 289 YSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQV---ALPLMGTWWFFASL 365
Cdd:PRK07363 301 YSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNpirGLPLTSALLVLAGM 380
|
330 340
....*....|....*....|..
gi 380448774 366 ANLALPPLPNLMGELMIITSLF 387
Cdd:PRK07363 381 ASAGIPGLVGFVAEFIVFQGSF 402
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
60-387 |
5.99e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 107.36 E-value: 5.99e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 60 DPLSTPLLILTCWLLPLMILASQNHTapGPTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRWGN 139
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYL--EHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 140 QAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTL-----SILTLQFSNPLPLSTLADKLWWAGCLLA-----FLVKMP 209
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLnmadlSAKIRGLSFPLTGGLAGNPPLALGVALAlalwaFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 210 LYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRIL-------PVLEPLTKDLIYPFIIFALWGVIMTGLICLRQTD 282
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 283 LKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFF 362
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340
....*....|....*....|....*
gi 380448774 363 ASLANLALPPLPNLMGELMIITSLF 387
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALL 423
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-394 |
8.79e-25 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 106.55 E-value: 8.79e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMR--ILPVLEPLTKDLIYPFIIFALWGVIMTGLICL 278
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRyyILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 279 RQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGT 358
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190
....*....|....*....|....*....|....*.
gi 380448774 359 WWFFASLANLALPPLPNLMGELMIITSLFNWSGWTL 394
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLI 416
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-407 |
9.43e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 106.50 E-value: 9.43e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 58 ATDPLSTPLLILTCwllpLMILASQNHTAPGPTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRW 137
Cdd:PRK08375 74 RADSLSALFLLVTS----ILAIAALLYAIGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 138 GNqAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSILTLQfSNPLPLSTLADKLwwAGCLLAFLVKMPLYGVHLWL 217
Cdd:PRK08375 150 GD-RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLA-GALAENPTVVTAF--GFVLLALALKAAVFPLHTWL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 218 PKAHVEAPIAGSMILAAVLLKLGGYGMMRIL----PVLEPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVG 293
Cdd:PRK08375 226 PRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 294 HMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPL 373
Cdd:PRK08375 306 QMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPT 385
|
330 340 350
....*....|....*....|....*....|....*
gi 380448774 374 PNLMGELMIITSLFN-WSGWTLLFTGTGTLITAGY 407
Cdd:PRK08375 386 SGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
50-387 |
5.21e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 86.71 E-value: 5.21e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 50 WTFLSSYMATDPLSTPLLILTCWLLPLMILASQNHTAPGPTNRQRMYITLLTSLQIF-LILAFSATEVIMFYVMFEATLI 128
Cdd:PRK08667 66 APGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMAL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 129 PTLFLITRWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSILTLQFSNP-LPLSTLAdklwwagCLLAFLVK 207
Cdd:PRK08667 146 SSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGiLSLVFLL-------LFLGFGIK 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 208 MPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILpvLEPLTKDLIYPFIIF------ALWGVIMTglicLRQT 281
Cdd:PRK08667 219 AGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFL--MDVLSPELWWGVLILlagsisALLGVIYA----LKEH 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 282 DLKSLIAYSSVGHMGLVVGGILIQTPWGFTG-----------ALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQ 350
Cdd:PRK08667 293 DLKGLLAYSSIENIGIILMGIGLYVIFGVYGldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLV 372
|
330 340 350
....*....|....*....|....*....|....*..
gi 380448774 351 VALPLMGTWWFFASLANLALPPLPNLMGELMIITSLF 387
Cdd:PRK08667 373 KLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
25-404 |
5.30e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 86.16 E-value: 5.30e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 25 PTTLTHSLLIALASINWFKNPSETGWTFLSSYMAT---DPLSTPLLILTCWLLPLMILASQNHtapgptNRQRMYITLLT 101
Cdd:PRK07234 28 NLALGMAIVSAVYALGLVASMVPLELTLLDNFGVTlraDALSGYFILTNALVTLAVIFYCWES------AKTRFFYAQLL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 102 SLQIFLILAFSATEVIMFYVMFEATLIPTLFLITrWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSILTLQ 181
Cdd:PRK07234 102 ILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 182 FSNPLPLSTLAdklwwagclLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLTKDLIYP 261
Cdd:PRK07234 181 TADPEAFALIA---------LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIF 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 262 FIIFALWGVImtglICLRQTDLKSLIAYSSVGHMGLVVGGILIqtpwgftgALILMIAHGLTSSALFCLANTNYERTHS- 340
Cdd:PRK07234 252 GVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSRNFTe 319
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 380448774 341 -RTMILARGLQVALPLmgtwwffASLANLALPPLPNLMGELMIITSLFNWSGWTLLFTGTGTLIT 404
Cdd:PRK07234 320 lISQMLGIGKWIPLTM-------ASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAAS 377
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
111-386 |
1.30e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 79.27 E-value: 1.30e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 111 FSATEVIMFYVMFEATLIPTLFLITrWGNQAERLNAGTYFLFYTLaGSLPLLVALLLLQNSTGTLSILTLQfSNPLPLST 190
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDFADIS-QGLINDTS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 191 LADKLWWAGCLLAF-LVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLePLTKDLI---------Y 260
Cdd:PRK08668 192 TGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVL-PGTKLFSefgtyrgvpL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 261 PFIIFALWG---VIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYER 337
Cdd:PRK08668 271 FNYILAWLGnisIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYR 350
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 380448774 338 THSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSL 386
Cdd:PRK08668 351 TGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
88-409 |
2.59e-15 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 78.55 E-value: 2.59e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 88 GPTNRQRMYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGTyfLFYTLAGSLPLLVALLL 167
Cdd:PRK12650 104 PRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAI 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 168 LQNSTGTLS---ILTLQF--SNPLPLSTLADKLWWAGCllaflVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGY 242
Cdd:PRK12650 182 AATQTGTTSlsgILHSDVwaEKPGLTTVVAVLIAVAAF-----TKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIY 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 243 GMMRILPVLEPLTKDLIYpFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGL 322
Cdd:PRK12650 257 LLLRFSPVFHDVAVWNWL-LIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHAL 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 323 TSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNL-----MGELMIITSLFNWSGWTLLFT 397
Cdd:PRK12650 336 FKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFvskegMLTAFLEAPGGNAGVVLLLVG 415
|
330
....*....|...
gi 380448774 398 -GTGTLITAGYSL 409
Cdd:PRK12650 416 aALGAVFTFAYSA 428
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-395 |
5.84e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 76.72 E-value: 5.84e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLTKDLIYPFIIFALwGVIMTGLIC--- 277
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsm 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 278 LRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLA---NTNYERTHSRTMILARGLQvalP 354
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAgilHRQYRSDRFDRIFDVFRLQ---P 368
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 380448774 355 LMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLL 395
Cdd:PRK08676 369 VAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVL 409
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
116-402 |
3.77e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 74.96 E-value: 3.77e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 116 VIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSILTLQFSNPL----PLSTL 191
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGDVirehPLYLA 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 192 ADKLWWAGcllAFlVKMPLYGVHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMMRILPVL--EPLTKDLIypfIIFALW 268
Cdd:PRK12647 197 ILLLVLGG---AF-TKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLNPVLggTPLWQTIL---PLFGGL 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 269 GVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARG 348
Cdd:PRK12647 269 TMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGG 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 380448774 349 LQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLFTGTGTL 402
Cdd:PRK12647 349 LRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
120-409 |
2.05e-13 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 71.90 E-value: 2.05e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 120 YVMFEATLIPTLFLITrWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSILTL-----QFSNPLPLSTLADK 194
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlnDMGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 195 LwwagcLLAFLVKMPLYGVHlWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLTKDLIYPFIIFALWGVIMTG 274
Cdd:PRK12663 213 F-----LLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 275 LI-CLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVAL 353
Cdd:PRK12663 287 ALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKE 366
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 380448774 354 PLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLFTGTGTLITAGYSL 409
Cdd:PRK12663 367 PLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-383 |
4.61e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 71.15 E-value: 4.61e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 109 LAFSATEVIMFYVMFEATLIPTLFLITRwGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSI--LTLQFSNpL 186
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMadLAVRLDE-L 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 187 PLSTLAdkLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPlTKDLIYPFIIFA 266
Cdd:PRK12665 204 PSGTRT--ALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVA 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 267 LWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILA 346
Cdd:PRK12665 281 LLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRL 360
|
250 260 270
....*....|....*....|....*....|....*...
gi 380448774 347 RGLQVALPLMGTWWFFASLaNLA-LPPLPNLMGELMII 383
Cdd:PRK12665 361 GGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALL 397
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
105-388 |
5.61e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 70.57 E-value: 5.61e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 105 IFLILAFSATEVIM------FYVMFEATLIpTLFLITRWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSIL 178
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 179 TL-QFSNPLplSTLADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLT-- 255
Cdd:PRK08377 192 HIaQLAGTI--DPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgw 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 256 KDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNY 335
Cdd:PRK08377 270 SSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVG 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 380448774 336 ERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFN 388
Cdd:PRK08377 350 ITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
214-424 |
3.08e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 68.64 E-value: 3.08e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 214 HLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMMRILPVLEpLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSV 292
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 293 GHMGLVVGGILIQtpwGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLmgTWWFF--ASLANLAL 370
Cdd:COG1009 309 SQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPI--TAITFliGALSLAGI 383
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 380448774 371 PPLPNLMGELMIITSLFNWSGWTLLFTGTGTL---ITAGYSLHM----FLTTQRGPLSTHI 424
Cdd:COG1009 384 PPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLfflvFFGKPRPKTPKHP 444
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
91-431 |
4.44e-12 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 68.24 E-value: 4.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 91 NRQRMYITLLtsLQIFLILAF-SATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQ 169
Cdd:PRK12646 108 NLPRFYFYLT--LFMFSMIGIvLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLY 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 170 NSTGTLSILTLQFSNplplSTLADKLWWAGCLLAFLV----KMPLYGVHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGM 244
Cdd:PRK12646 186 IMTGTNNITEILGQA----DHIKNHGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLL 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 245 MRILPVLEpLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVV-----GGILIQTPWG---------F 310
Cdd:PRK12646 261 FRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQDaiasiyvfvL 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 311 TGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWS 390
Cdd:PRK12646 340 FAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTG 419
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 380448774 391 -----GWTLLFTGT-----GTLITAGYSLHMFLTTQRGPLSTHIIALEPSH 431
Cdd:PRK12646 420 qlsqfSLISMIIIVfigviASIFTFTYALYMVKEVFWGKYDSKVFTKKNIH 470
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
73-345 |
1.08e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 66.49 E-value: 1.08e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 73 LLPLMI-LASQNHTAPGPTNRQRMYITLltSLqIFLILAFSATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFL 151
Cdd:MTH00062 52 LLVLFLgLYSQVMFYNLLSGVSRFFLFL--SL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 152 FYTLAGSLPLLVALLLLQNSTGTLSILTLQFSNplplstlaDKLWWAGCLLA--FLVKMPLYGVHLWLPKAHVEAPIAGS 229
Cdd:MTH00062 129 GYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDD--------SVSLIVYYVLSfmFITKVPLFPFHTWLPIVHAEASSPVS 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 230 MILAAVLLKLGGYGMMRILPVLEPLTKdLIYPFIIFALWGVIMtgLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWG 309
Cdd:MTH00062 201 IFLSGYIMKLGLLGVYRFCGFIFSGSF-LGYLFLCCLFSVFFL--ITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSS 277
|
250 260 270
....*....|....*....|....*....|....*.
gi 380448774 310 FTGALILMIAHGLTSSALFCLANTNYERTHSRTMIL 345
Cdd:MTH00062 278 INLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
60-387 |
2.07e-11 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 65.77 E-value: 2.07e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 60 DPLSTPLLILTCWLLPLMILAS------QNHTAPGPTNRQRMYITLLTSLQIFLILAFSATeVIMFYVMFEATLIPTLFL 133
Cdd:PRK06525 74 DPVSVLIGFVVVLLGLLVTLYStgymspGNREHPVHEGTGRYYAFLLLFIGAMAGLVYSST-LLGLLLFFEITGLCSWAL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 134 ITRWGNQAERLNAGTYFLFyTLAGSLPLLVALLLLQNSTGTLSILTLQfsnplPLSTLADKLWWAGCLLAFLVKMPLYGV 213
Cdd:PRK06525 153 ISYYQSPKALRSALKALLI-THIGSLGLYLAAATLFLQTGTFALSALS-----GLHGSLKYLVFLGILFAAWGKSAQLPF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 214 HLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMMRILPVLEPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSV 292
Cdd:PRK06525 227 YSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 293 GHMGLVVGGILIQ---TPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLA 369
Cdd:PRK06525 306 TQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITG 385
|
330
....*....|....*...
gi 380448774 370 LPPLPNLMGELMIITSLF 387
Cdd:PRK06525 386 VPPFNGFFSKFPIFAAGF 403
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-402 |
5.05e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 64.58 E-value: 5.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLTKDLIYPFIIF-ALWGVIMTGLICLR 279
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILIlALLTIIFGVIGAVA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 280 QTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGtW 359
Cdd:PRK07691 296 YFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLG-W 374
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 380448774 360 WFFASLANLA-LPPLPNLMGELMIITSLFN----WSGWTLLFTGTGTL 402
Cdd:PRK07691 375 MFFIAALSLAgIPPLSGFYGKFFIVEGTFEagfyVSGIIVLLSSLLVL 422
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-387 |
1.15e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 63.58 E-value: 1.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 119 FYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFY-TLAGSLPLLVALLLL-QNSTGTLSILTLQFS-NPLPLSTLADKL 195
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVgSLASSMVLLGIALLYgQYGTLNMAYLAVKMSeNPTVVAKIALAL 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 196 WWAGcllaFLVKMPLYGVHLWLPKAHVEAPIAGSMILaaVLLKLGG-YGMMRIL-----PVLEPLTKDLIypFIIFALWG 269
Cdd:PRK08376 226 FIAG----LAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLfsiygPAINLATVGWV--IIILGCLT 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 270 VIMTGLICLRQTDLKSLIAYSSVGHMG---------LVVGGILIQTPWGFT---GALILMIAHGLTSSALFCLANTNYER 337
Cdd:PRK08376 298 MFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVIYE 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 380448774 338 THSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLF 387
Cdd:PRK08376 378 TGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSA 427
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
118-387 |
2.73e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 62.60 E-value: 2.73e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 118 MFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSILTLQFSNPLPlstladklWW 197
Cdd:PRK06521 137 SFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAHLSP--------FW 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 198 AGC--LLAFL---VKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRIlpvleplTKDLIYPFIifALWGVIM 272
Cdd:PRK06521 209 ASLvfLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV-------VFDLLGAPG--WWWGVLV 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 273 TG----------LICLRQTDLKSLIAYSSVGHMGLVVGGI---LI--------QTPWGFTGALILMIAHGLTSSALFCLA 331
Cdd:PRK06521 280 LAlgaisavlgvLYALAEHDLKRLLAYSTIENIGIIFVGLglaMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGA 359
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 380448774 332 NTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLF 387
Cdd:PRK06521 360 GAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
31-409 |
1.30e-09 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 60.13 E-value: 1.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 31 SLLIALASInWFKNPSETGWTFLSSYmATDPLSTPLLILTCWLLPLMILASQNHTAPGPTNRQRMYITLLTSLQIFLILA 110
Cdd:COG1007 42 GLLLALALL-LLALGGGTGTAFGGMF-VVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 111 fSATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGT-YFLFYTLA------------GSlpllvallllqnsTGTLSI 177
Cdd:COG1007 120 -SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSsgfllygisllyGA-------------TGSLNL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 178 LTLqfSNPLPLSTLADKLWWAGCLL---AFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLlKLGGYGM-MRIL-PVLE 252
Cdd:COG1007 186 AGI--AAALAAGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLvEAFP 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 253 PLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALF-CLA 331
Cdd:COG1007 263 GLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVIL 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 332 NTNYERTHSRTMILARGLQVALPLMGtWWFFASLANLA-LPPLPNLMGELMIITSLFNWSGWTLLFTGT-GTLITAGYSL 409
Cdd:COG1007 343 LLSRKGGEAEEIEDLAGLARRSPLLA-LAMTIFLLSLAgIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVlNSVISAYYYL 421
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
66-388 |
1.75e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 59.83 E-value: 1.75e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 66 LLILTCWLLPLmILASQNHTAPGPTNRQRMYITLLTSLQIFLILAFSaTEVIMFYVMFEATLIPTLFLITRWGNQAERLN 145
Cdd:PRK06589 90 LLIGFLWICAL-LYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALS-SDLFTMFVCYELLTISTAFLIGHTRNNISLSG 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 146 AGTYFLFYTLAGSLPLLVALLLLQNSTGTLSiltlqFSNPLPLSTlADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAP 225
Cdd:PRK06589 168 GYKYLKILMISALLLFLPAVILIYTKTGNLD-----FVSGGLFSK-NQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHY 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 226 IAGSMILAAVLLKLGGYGMMRILPVLEPLTKDLIY-----PFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVG 300
Cdd:PRK06589 242 PVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIfaefnWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALL 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 301 GILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGEL 380
Cdd:PRK06589 322 SAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKF 401
|
....*...
gi 380448774 381 MIITSLFN 388
Cdd:PRK06589 402 LILLAASE 409
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
172-397 |
5.08e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.21 E-value: 5.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 172 TGTLSILTLqFSNPLPLSTlaDKLWWAGCLLAFL---VKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRIL 248
Cdd:PRK12662 187 TGTLNMGDM-FLIIQDLPT--NRAIQIGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIV 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 249 -----PVLEPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLT 323
Cdd:PRK12662 264 ydvfkANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIV 343
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 380448774 324 SSALFCLANT---NYERTHSRTMIlarGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLFT 397
Cdd:PRK12662 344 KSALFMVSGSisyHFGTTKLEDCL---NLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVV 417
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
173-388 |
1.57e-08 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 56.76 E-value: 1.57e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 173 GTLSILTL-QFSNPLPLSTLadkLWWAGcLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRI--LP 249
Cdd:PRK08042 162 GTLDLRLLdMRMQQLPLGSD---IWLLG-VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLslLG 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 250 VLEPLTKDLIypFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLV-------VGGILIQTP----WGFTGALILMI 318
Cdd:PRK08042 238 GNAPLWWGVA--LLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPaliaLGLVGGLYHLL 315
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 319 AHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFN 388
Cdd:PRK08042 316 NHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
214-328 |
6.24e-08 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 54.83 E-value: 6.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 214 HLWLPKAHVEAPIAGSMILAAVLlKLGGYGM-MRILPV-LEPLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSS 291
Cdd:PRK05777 224 HMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
90 100 110
....*....|....*....|....*....|....*..
gi 380448774 292 VGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALF 328
Cdd:PRK05777 303 IAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
94-381 |
2.35e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 53.29 E-value: 2.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 94 RMYITLLTSLQIFLILAFSATEVIMFyVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTG 173
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 174 TLSILTLQFSNPLPLSTLADKLWWAGCLLAFL------VKMPLYgvhLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMMR 246
Cdd:PRK12649 191 TYDIATILQDSELIENIKGHPLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVSAFLhSATMVKAGVYLVAR 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 247 ILPVLEPLTKDLIYPFIIfALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVV---GGILIQTP-WGFTGALILMIAHGL 322
Cdd:PRK12649 267 IHPIFSGTEAWFILVSGT-GMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMtmyGYTTYHEPgLGVAAATFHLLNHAT 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 380448774 323 TSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELM 381
Cdd:PRK12649 346 FKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEM 404
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-403 |
1.00e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 51.00 E-value: 1.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 201 LLAFLVKMPLYGVHLWLPKAHVEA--PIAGsmiLAAVLLKLGGYGMMRI--------LPVLEPLTKDLIYPF----IIFA 266
Cdd:PRK12666 217 LVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLstllfgpeAGASAGFGQDWLLPGglatLAFG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 267 LWGVIMTgliclrqTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLAN-------------- 332
Cdd:PRK12666 294 AIGVLAA-------QRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADlverqrgaaadrla 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 333 ---TNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFN-------WSGWT-LLFTGTGT 401
Cdd:PRK12666 367 vtpELYDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgagaaWWLWAlVLLSGLAA 446
|
..
gi 380448774 402 LI 403
Cdd:PRK12666 447 LI 448
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
263-383 |
1.30e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 50.42 E-value: 1.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 263 IIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 380448774 343 MILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMII 383
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLA 390
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
201-409 |
1.90e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 49.95 E-value: 1.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILP-VLEPLTKDLIYPFIIFALWGVIMTGLICLR 279
Cdd:TIGR01770 210 LVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLyILFGFSEAWQIFLAIIAFLSMLIGNFGALA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 280 QTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALF-CLANT-NYERTHSRTMILARGLQVALPLMG 357
Cdd:TIGR01770 290 QKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNPILA 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 380448774 358 TWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLLFTG-TGTLITAGYSL 409
Cdd:TIGR01770 370 ILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAvLTSVIGAFYYL 422
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
60-383 |
1.46e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 47.65 E-value: 1.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 60 DPLSTPLLILTCWLLPLMILASQNHTAPGP-TNRQRMYITLLTSLQIFLIlafSATEVIMFYVMFEATLIPTLFLITRWG 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFTFLMMVLV---TSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 139 NQAERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSILTLQ--------FSNPLPLSTLADKLW--WAGCLLAFLV-- 206
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsvgsgiMDRGYYGGGAYESPLapFAIIGILLLIgc 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 207 --KMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLE--PLTKDLIypfIIFALWGVIMTGLICLRQTD 282
Cdd:MTH00032 236 igKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEkaPLTLLII---TIFGALTAFFAATVGLVQND 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 283 LKSLIAYSSVGHMGLVVggILIQTPWGFTGALILMIAHGLTSSALFCLA-----NTNYERTHSRTMilaRGLQVALPLMG 357
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFTY 387
|
330 340
....*....|....*....|....*.
gi 380448774 358 TWWFFASLANLALPPLPNLMGELMII 383
Cdd:MTH00032 388 TMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
214-392 |
2.51e-05 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 46.83 E-value: 2.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 214 HLWLPKAhVEAPIAGSMILAAVLLKLGGYGMMRILPVLE--PLTKDLIypfIIFALWGVIMTGLICLRQTDLKSLIAYSS 291
Cdd:PRK07390 241 HLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQPVLAlsPVALTVL---IVIGTVTAIGASLVAIAQIDIKRALSYST 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 292 VGHMGLVVGGILIQTPwgfTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLANLALP 371
Cdd:PRK07390 317 SAYLGLVFIAVGLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALL 393
|
170 180
....*....|....*....|.
gi 380448774 372 PLPNLMGELMIITSLFNWSGW 392
Cdd:PRK07390 394 PLGGFWALLRLADGLWAVSPW 414
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-413 |
5.06e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 45.26 E-value: 5.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLlKLGGYGMM-RILPVLEpltkdLIYPFIIFALWGVIMTGLICLR 279
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLsNFLDLYW-----LAYLLCVISVLSALVGSIGGLN 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 280 QTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTssaLFCLANTNYerthSRTMILARGLQVALPLMGTW 359
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFL---FFSLWSGDS----GSMKDLGSLKPSYKTGLSII 237
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 380448774 360 WFFASLAnlALPPLPNLMGELMIITSLFNWSGWTLLFTG-TGTLITAGYSLHMFL 413
Cdd:MTH00144 238 SLLLSLG--GLPPFLGFCSKLLVLISSMESSPLLLILLLlLGSLISLFFYLSVFF 290
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
172-414 |
1.22e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 44.30 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 172 TGTLSILTLQFSNPLPLSTLADKLwwAGCLLAF--LVKMPLYGVHLWLPKAhVEAPIAGSMILAAVLLKLGGYGMMRILP 249
Cdd:PRK08168 178 VGSLSLSALWAHLAAQGASPSLQA--AALLLVLavILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIRFAP 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 250 VLEpLTKDLIYPFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLvvggILIQTPWG-FTGALILMIAHGLTSSALF 328
Cdd:PRK08168 255 LLE-QAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF----MLLECGLGlYELALLHLVAHSLYKAHAF 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 329 CLANTNYERTHSRTM-----------ILARGLQ--VALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNWSGWTLL 395
Cdd:PRK08168 330 LSASEAVRDTRLRRLqgpqsaagvvsLLLAPLLsaALVLLLQSLLPLGAWPWWWSAVLALAWAPLLWQPCASGASTLSGL 409
|
250
....*....|....*....
gi 380448774 396 ftGTGTLITAGYSLHMFLT 414
Cdd:PRK08168 410 --GLGLLLVAGLTALAFLA 426
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-409 |
2.74e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 43.37 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 214 HLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMMRI------LPVLEPLTkdliypfIIFALWGVIMTGLICLRQTDLKSL 286
Cdd:PRK12644 223 HFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLapgfadVPVWRPTV-------LVLGLATMLLGGWRALRQHDLKLI 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 287 IAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALPLMGTWWFFASLA 366
Cdd:PRK12644 295 LAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAALAAAS 374
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 380448774 367 NLALPPLPNLMGELMIITSLFN------WSGWTLLFTGTGTLITAGYSL 409
Cdd:PRK12644 375 MAGLPPLLGFVAKEAALEAVLHdgalgpAGPVVLAGIVLGSILTVAYSL 423
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
95-388 |
7.43e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 41.49 E-value: 7.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 95 MYITLLTSLQIFLILAFSATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAGTYFLFYTLAGSLPLLVALLLLqNSTGT 174
Cdd:MTH00200 5 ILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNA-WTSGQ 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 175 LSILtlQFSNPLPLSTLadklwwagcLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLlKLGGYGmmrILPVLEPL 254
Cdd:MTH00200 84 WGIS--EMLGPLSETLI---------LLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQ-KLAPFA---LLIQLAPA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 255 TKDLIypFIIFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTpwgFTGALILMIAHGLTSSALFCLANTN 334
Cdd:MTH00200 149 LNSNI--LLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSP---NLALLYLLLYVIITLTVFLLLNLLN 223
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 380448774 335 YERTHSRTMILARGlqvalPLMGTWWFFASLANLALPPLPNLMGELMIITSLFN 388
Cdd:MTH00200 224 STKINSLSSSKTKN-----PILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSK 272
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
202-387 |
8.33e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 41.70 E-value: 8.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 202 LAFLVKMPLYGVHL--WLPKAHVEAPIAGSMILAAVLLKLGGYGMMRILPVLEPLTKDLI-YPFIIFALWGVIMTGLICL 278
Cdd:PRK06459 166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFgLTILAIGAFSILFGALYAY 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 279 RQTDLKSLIAYSSVGHMG--LVVGGILIQTPWGFT--------GALILMIAHGLTSSALFCLANTnyerTHSRTMILARG 348
Cdd:PRK06459 246 VSENVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVILYSFAHSVAKTGLFLSSGL----QEKQSITYSKK 321
|
170 180 190
....*....|....*....|....*....|....*....
gi 380448774 349 LQVALPLMGTWWFFASLAnlALPPLPNLMGELMIITSLF 387
Cdd:PRK06459 322 IRNRWIELGLTLLASSLS--GLLPNIGGVASWLLLESLF 358
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
201-411 |
8.42e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 41.30 E-value: 8.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 201 LLAFLVKMPLYGVHLWLPkaHVEAPIagSMILAAVLLKLGGYGMMRILPVLEPLTKDLIYPFIifALWGVIMTGLICLRQ 280
Cdd:MTH00011 95 LVSLMLKLGMAPCHFWFP--SVMSSI--SWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSM--AAMSALAGGLGGMNQ 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 281 TDLKSLIAYSSVGHMGLVVggiLIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMILARGLQVALplmgtwW 360
Cdd:MTH00011 169 TQLRPLLAYSSIGHMGWMT---MISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSM------S 239
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 380448774 361 FFASLANLA-LPPLPNLMGELMIITSLFNWSG--WTLLFTgTGTLITAGYSLHM 411
Cdd:MTH00011 240 LFIMLLSLGgLPPFTGFMPKLMAIETLTSNSMilILLVLI-VGSLMNLFYYLNL 292
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
108-328 |
8.50e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 41.55 E-value: 8.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 108 ILAFSATEVIMFYVMFEATLIPTLFLITRWGNQAERLNAG-TYFLFYTLAgSLPLLVALLLLQNSTGTLSILTLQFSNPL 186
Cdd:MTH00196 7 LCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALS-SGLFLFGCALLCGTTGGLHLSYINLVLNS 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 187 PLSTLADKLWWAGCLL--AFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLlKLGGYGMM-RILPVLEPLtkdliypfI 263
Cdd:MTH00196 86 GQSFSSVSVPIGYLLIivALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVP-KLGIFSILvSIGLNVNIL--------L 156
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 380448774 264 IFALWGVIMTGLICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALF 328
Cdd:MTH00196 157 IGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-418 |
1.25e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 41.16 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 197 WAGCLLAFLVKM---------PLygvHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGMMRILPVLEPLtkdliyPFI--I 264
Cdd:PRK07376 224 WLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTPISaLIHAATMVAAGVFLVARMYPVFEQF------PAVmtV 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 265 FALWGVIMTGL---ICLRQTDLKSLIAYSSVGHMGLVVGGILIQTPwgfTGALILMIAHGLTSSALFCLANT-------- 333
Cdd:PRK07376 294 IAWTGAITAFLgasIALTQNDIKKGLAYSTISQLGYMVMAMGCGAY---SAGLFHLMTHAYFKAMLFLGSGSvihgmeev 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 334 -NYERTHSRTMILARGLQVALPLMGTWWFFASLANLALPPLPNLMGELMIITSLFNwSGWTLLFTGTGTL-ITAGYSLHM 411
Cdd:PRK07376 371 vGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFE-ANPALWFVGFLTAgMTAFYMFRM 449
|
....*..
gi 380448774 412 FLTTQRG 418
Cdd:PRK07376 450 YFLTFEG 456
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
212-299 |
1.37e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 41.22 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 212 GVHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGMMRILPVLEPLTKDLIYPFIIFALwGVIMTGLICLRQTDLKSLIAYS 290
Cdd:MTH00020 228 GLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSL-TVFFAATVGLVQNDLKKVIAYS 305
|
....*....
gi 380448774 291 SVGHMGLVV 299
Cdd:MTH00020 306 TCSQLGYMV 314
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
214-299 |
5.10e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 39.52 E-value: 5.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 214 HLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGMMRILPvlepltkdliypfiIFA-----LWGVIMTGLICL--------R 279
Cdd:PRK12645 230 YIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFTP--------------IFAgsqvwFWTVTLVGLITLfwgslnavK 294
|
90 100
....*....|....*....|
gi 380448774 280 QTDLKSLIAYSSVGHMGLVV 299
Cdd:PRK12645 295 QTDLKGILAFSTVSQLGLIM 314
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
202-318 |
6.03e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 38.84 E-value: 6.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 380448774 202 LAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLlKLGGYG-MMRILPVLEPLtkdliypfIIFALWGVIMTGLICLRQ 280
Cdd:MTH00199 198 ISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVP-KIGVFSiLVQIGPVTNVV--------LICAVLSIIYGAIGALNQ 268
|
90 100 110
....*....|....*....|....*....|....*...
gi 380448774 281 TDLKSLIAYSSVGHMGLVVGGILIQTPWGFTGALILMI 318
Cdd:MTH00199 269 TKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMI 306
|
|
| |
