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Conserved domains on  [gi|37928546|gb|AAP68815|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Chalcomitra senegalensis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.71e-55

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 168.17  E-value: 1.71e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    1 MNMILFMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 37928546   81 QLQSPATTLALASSLILLLTLGLIYEWIQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.71e-55

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 168.17  E-value: 1.71e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    1 MNMILFMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 37928546   81 QLQSPATTLALASSLILLLTLGLIYEWIQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 4.38e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 92.87  E-value: 4.38e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    20 LLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLlpLPWATQL-QSPATTLALASSLILL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 37928546    99 LTLGLIYEWIQGGLE 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-114 2.97e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 86.33  E-value: 2.97e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546   4 ILFMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLlpLPWATQLQ 83
Cdd:COG0838   8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                        90       100       110
                ....*....|....*....|....*....|..
gi 37928546  84 S-PATTLALASSLILLLTLGLIYEWIQGGLEW 114
Cdd:COG0838  86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.71e-55

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 168.17  E-value: 1.71e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    1 MNMILFMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 37928546   81 QLQSPATTLALASSLILLLTLGLIYEWIQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 4.41e-51

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 156.96  E-value: 4.41e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    2 NMILFMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLLPLPWATQ 81
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 37928546   82 LQSPATTLALASSLILLLTLGLIYEWIQGGLEWA 115
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-116 8.32e-51

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 156.31  E-value: 8.32e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    3 MILFMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLLPLPWATQL 82
Cdd:MTH00069   1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 37928546   83 QSPATTLALASSLILLLTLGLIYEWIQGGLEWAE 116
Cdd:MTH00069  81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-116 2.74e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 134.68  E-value: 2.74e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    1 MNMILfMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00106   1 MNLML-TLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 37928546   81 QLQSPATTLALASSLILLLTLGLIYEWIQGGLEWAE 116
Cdd:MTH00106  80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 5.33e-38

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 123.94  E-value: 5.33e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    1 MNMILFMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 37928546   81 QLQSPATTLALASSLILLLTLGLIYEWIQGGLEWAE 116
Cdd:MTH00042  81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 8.56e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 113.07  E-value: 8.56e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    1 MNMILFMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLLPLPWAT 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 37928546   81 QLQSPATTlaLASSLILLLTLGLIYEWIQGGLEW 114
Cdd:MTH00203  81 QLSSLSLL--LAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 9.60e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 95.31  E-value: 9.60e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    1 MNMILFMIALSLTLSIVLTLLNFWLAQMTP-DSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRSYsDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 37928546   80 TQLQSPATTLALASSLILLLTLGLIYEWIQGGLEWAE 116
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 4.38e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 92.87  E-value: 4.38e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    20 LLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLlpLPWATQL-QSPATTLALASSLILL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 37928546    99 LTLGLIYEWIQGGLE 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-114 7.06e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 92.92  E-value: 7.06e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    3 MILFMIALSLTLSIVLTLLNFWLAQMTP-DSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLLPLPWATQ 81
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSImDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 37928546   82 LQSPATTLALASSLILLLTLGLIYEWIQGGLEW 114
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 4-114 6.73e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 88.23  E-value: 6.73e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    4 ILFMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLlpLPWATQL- 82
Cdd:MTH00055   8 IFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYn 85

                         90       100       110
                 ....*....|....*....|....*....|..
gi 37928546   83 QSPATTLALASSLILLLTLGLIYEWIQGGLEW 114
Cdd:MTH00055  86 QIGLFGFWVMYLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 1.06e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 87.74  E-value: 1.06e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    1 MNMILFMIALSLTLSIVLTLLNFWL-AQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLsFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 37928546   80 TQLQSPATTLALASSLILLLTLGLIYEWIQGGLEWAE 116
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-114 2.97e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 86.33  E-value: 2.97e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546   4 ILFMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLlpLPWATQLQ 83
Cdd:COG0838   8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                        90       100       110
                ....*....|....*....|....*....|..
gi 37928546  84 S-PATTLALASSLILLLTLGLIYEWIQGGLEW 114
Cdd:COG0838  86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 4-115 1.54e-22

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 84.92  E-value: 1.54e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    4 ILFMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLlpLPWATQL- 82
Cdd:PRK06602  11 FLIFLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFr 88

                         90       100       110
                 ....*....|....*....|....*....|...
gi 37928546   83 QSPATTLALASSLILLLTLGLIYEWIQGGLEWA 115
Cdd:PRK06602  89 EIGWLGFVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 4-114 2.57e-22

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 83.96  E-value: 2.57e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    4 ILFMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLLPLPWATQLQ 83
Cdd:MTH00018   3 LFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQI 82

                         90       100       110
                 ....*....|....*....|....*....|.
gi 37928546   84 SPaTTLALASSLILLLTLGLIYEWIQGGLEW 114
Cdd:MTH00018  83 AP-FGFWTMVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 4.79e-22

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 83.37  E-value: 4.79e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    1 MNMILFMIALSLTLSIVLTLLNFWLA-QMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAaRSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 37928546   80 TQLQSPATTLALASSLILLLTLGLIYEWIQGGLEWA 115
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 12-114 2.33e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 71.89  E-value: 2.33e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546   12 LTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLlpLPWATQL-QSPATTLA 90
Cdd:MTH00030  21 LLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFnQLNLFSFW 98

                         90       100
                 ....*....|....*....|....
gi 37928546   91 LASSLILLLTLGLIYEWIQGGLEW 114
Cdd:MTH00030  99 IVYTFLIVLAIGLAYEWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 4-114 1.44e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 53.91  E-value: 1.44e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    4 ILFMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLP--FSIRFFMVAILFLLFDLEIALLLPlpWATQ 81
Cdd:PRK07928   7 ILVLGALAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVS 84

                         90       100       110
                 ....*....|....*....|....*....|....
gi 37928546   82 LQSPAT-TLALASSLILLLTLGLIYEWIQGGLEW 114
Cdd:PRK07928  85 FDALGVfGLVEMALFMLTVFVAYAYVWRRGGLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 10-114 4.41e-09

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 50.37  E-value: 4.41e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546   10 LSLTLSIVLTLLNFW----LAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLlpLPWATQLQSP 85
Cdd:CHL00022  12 AFLIISSLIPILAFLisglLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVL 89

                         90       100       110
                 ....*....|....*....|....*....|
gi 37928546   86 A-TTLALASSLILLLTLGLIYEWIQGGLEW 114
Cdd:CHL00022  90 GvSAFIEALIFVLILIVGLVYAWRKGALEW 119
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-74 1.78e-08

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 48.35  E-value: 1.78e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 37928546    1 MNMILFMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLL 74
Cdd:MTH00092   1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
3-114 9.18e-07

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 44.35  E-value: 9.18e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37928546    3 MILFMIALSLTLSIVLTLLNFWLAQMTPDSEKLSPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLLPlpWATQL 82
Cdd:PRK07756  11 IVLIFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAY 88

                         90       100       110
                 ....*....|....*....|....*....|...
gi 37928546   83 -QSPATTLALASSLILLLTLGLIYEWIQGGLEW 114
Cdd:PRK07756  89 dKLGLFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
25-79 4.59e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 39.65  E-value: 4.59e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 37928546   25 LAQMTPDSEKLSPYECGFDPLGSARlPFSIRFFMVAILFLLFDLEIALLlpLPWA 79
Cdd:PRK08489  38 LAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWA 89
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 36-77 8.67e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 38.73  E-value: 8.67e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 37928546   36 SPYECGFDPLGSARLPFSIRFFMVAILFLLFDLEIALLLPLP 77
Cdd:MTH00060  39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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