|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-732 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1390.00 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 1 MEHTYQYAWVIPLLPLPVIMSMGFGLFLVPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTVNND 80
Cdd:CHL00025 1 MEHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYL 160
Cdd:CHL00025 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 161 LIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNEINSLLTILCAFLLFLGAVAK 240
Cdd:CHL00025 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLA 320
Cdd:CHL00025 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 321 YSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEPLVGYSPDKSQNMVLMGGLRKYIPITRTCFLW 400
Cdd:CHL00025 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 401 GTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYSSTKEDSLYSISLWG 480
Cdd:CHL00025 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 481 KRISKGVNRDFVLST--AKSGVSFFSQNLSKIHVNTGNRIGSFSTSLGTKNTFVYPHEPGNTMLFPLLILLLCTLFIGSI 558
Cdd:CHL00025 481 KEESKKINKLLLLLTmnNNERVSFFSKKTYKIDGNVRNMIRSFITIFGNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFI 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 559 GIHFDNEIGELTILSKWLTPSINFFQESSNSSINSYEFITNAISSVSLAIFGLFIAYMFYGSAYSFFQNLDLINSFVKGG 638
Cdd:CHL00025 561 GIPFNQEGIDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGG 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 639 PKKYFFHQLKKKIYSWSYNRGYIDIFYTRTFTLGIRGLTELTQFFDKGVIDGITNGVGLASFCIGEEIKYVGGGRISSYL 718
Cdd:CHL00025 641 PKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKYVGGGRISSYL 720
|
730
....*....|....
gi 378758457 719 FFFLCYVSVFLFFF 732
Cdd:CHL00025 721 FLYLFYVSIFLLIL 734
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-732 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 696.00 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 1 MEHTYQYAWVIPLLPLPVIMSMGFGLFLVPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTVNND 80
Cdd:PRK07376 1 MESAYQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYL 160
Cdd:PRK07376 81 FHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 161 LIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNEINSLLTILCAFLLFLGAVAK 240
Cdd:PRK07376 161 LVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLA 320
Cdd:PRK07376 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 321 YSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEPLVGYSPDKSQNMVLMGGLRKYIPITRTCFLW 400
Cdd:PRK07376 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLI 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 401 GTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGylrvHFQNYSSTKEDSLysislwg 480
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG----EFRGNDKELQKEL------- 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 481 kriskgvnrdfvlsTAKSGVSFFSQNLSKIHVNTGNRIGSfstslgtkntfvyPHEPGNTMLFPLLILLLCTLFIGSIGI 560
Cdd:PRK07376 470 --------------LAAADAPGHHEGHHEEHGEHHHHSGS-------------PHESPWTMTLPLVVLAVPSVLIGLLGT 522
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 561 HFDNEIGELtilskwLTPSINFFQESSNSSINsyEFITNAISSVSLAIFGLFIAYMFYgsaysFFQNLDLinsfvKGGPK 640
Cdd:PRK07376 523 PWNNRFEAF------LHAPGEALEAAAHFEWG--EFLILAGASVGIALIGITLASLMY-----LLKKIDP-----AAIAE 584
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 641 KYffhqlkKKIYSWSYNRGYIDIFYTRTFTLGIRGLTELTQFFDKGVIDGITNGVGLASFCIGEEIKYVGGGRISSYLFF 720
Cdd:PRK07376 585 RF------PPLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVTLGSGEGLKYFENGRAQFYALI 658
|
730
....*....|..
gi 378758457 721 FLCYVSVFLFFF 732
Cdd:PRK07376 659 VFGAVLGLVIVF 670
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
5-731 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 566.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 5 YQYAWVIPLLPLpvimsmgFGLFLVPTATKNLRRIWAF-PSVLLLSIAMVFSVHLSIQQINGSsIYQYLWSWTVNNDFSL 83
Cdd:COG1009 1 LQLLWLIPLLPL-------LGALLAGLLGRRLGRRAAGwLAALAPLAAFVLSLLLFPAVLGGE-VVVELYTWIPVGSLGL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 84 EFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIG 163
Cdd:COG1009 73 DFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 164 FWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFkianNWIPNNEINSLLTILCaFLLFLGAVAKSAQ 243
Cdd:COG1009 153 FWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELL----AAAPTILSSPLLTLIL-LLLLLGAFGKSAQ 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYST 323
Cdd:COG1009 228 FPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYST 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 324 MSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEplvgyspdkSQNMVLMGGLRKYIPITRTCFLWGTL 403
Cdd:COG1009 308 VSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGAL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 404 SLCGIPPLACFWSKDEILSNSW---LYSPFFGIIASFTAGLTAFYMFRIYLLTFdgylrvhfqnysstkedslysislWG 480
Cdd:COG1009 379 SLAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVF------------------------FG 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 481 KRISKgvnrdfvlstaksgvsffsqnlskihvntgnrigsfstslgtknTFVYPHEPGNTMLFPLLILLLCTLFIGSIGI 560
Cdd:COG1009 435 KPRPK--------------------------------------------TPKHPHESPWLMTLPLVVLAVLSLVLGLLLP 470
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 561 HFdneigeltiLSKWLTPSINFFQESSnssiNSYEFITNAISSVsLAIFGLFIAYMFYgsaysffqnldlinsfvkGGPK 640
Cdd:COG1009 471 GL---------LEGLLAPAAVLGGELH----LAHGLLLNALPLL-LSLLGIALGYLLY------------------LKRP 518
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 641 KYFFHQLKKKIYSWSYNRGYIDIFYTRTFTLGIRGLTELTqFFDKGVIDGITNGVGLASFCIGEEIKYVGGGRISSYLFF 720
Cdd:COG1009 519 LPALAERLKPLYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLARLTLFSGRLLRRLQTGYLQFYALT 597
|
730
....*....|.
gi 378758457 721 FLCYVSVFLFF 731
Cdd:COG1009 598 ILLGVVVLLLL 608
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
7-733 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 549.76 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 7 YAWVIPLLPLpvIMSMGFGLFLvptatknlRRIWAFPS----VLLLSIAMVFSVHLSIQ--QINGSSIYQYLWSWTVNND 80
Cdd:PRK06590 4 LLWLIVLLPL--IGALILGLFG--------RRIGEKWAhlvgTGLVGLSALLSLVVFFDflLGGGRAFSQTLWTWISVGD 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYL 160
Cdd:PRK06590 74 FDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 161 LIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNEinSLLTILCaFLLFLGAVAK 240
Cdd:PRK06590 154 LIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFFGLGW--SALTLIC-LLLFIGAMGK 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLA 320
Cdd:PRK06590 231 SAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLA 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 321 YSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspDKSQNMVLMGGLRKYIPITRTCFLW 400
Cdd:PRK06590 311 YSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLI 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 401 GTLSLCGIPPLACFWSKDEILSNSW-LYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNysstkedslysislw 479
Cdd:PRK06590 383 GTLALIGIPPFAGFFSKDEILEAAFaNGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKEKEKIHH--------------- 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 480 gkriskgvnrdfvlstaksgvsffsqnlskihvntgnrigsfstslgtkntfvyPHEPGNTMLFPLLILLlctlfIGSIG 559
Cdd:PRK06590 448 ------------------------------------------------------PHESPAVMTLPLIVLA-----VLSVF 468
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 560 IHFDNEIGELTILskWLTPSINFFQESsnssinSYEFITNAISSVSLAIFGLFIAYMFYGSAYSFFQNLDLINSFvkggp 639
Cdd:PRK06590 469 AGALIVPPFLGVL--PLTTELAHGEAE------HHLPVWVALLPLVVALAGIALAWLLYLKKPTLPTSIAAPGRF----- 535
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 640 kkyffhqlkkkIYSWSYNRGYIDIFYTRTFTLGIRGLTE-LTQFFDKGVIDGITNGVGLASFCIGEEIKYVGGGRISSYL 718
Cdd:PRK06590 536 -----------LYTLLRNKYYFDELYEKVFVKPGLALARlLWKDGDDGIIDGLVPNSARLVGGGSRVLRRLQTGYLRHYA 604
|
730
....*....|....*
gi 378758457 719 FFFLCYVSVFLFFFL 733
Cdd:PRK06590 605 ASMLIGAVVLLALLL 619
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
44-722 |
3.01e-157 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 469.07 E-value: 3.01e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 44 SVLLLSIAMVFSVHLSIQQINGSS---IYQYLWSWTVNNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEG 120
Cdd:TIGR01974 33 GIGSVGLSAALSAFVFVDFFLNGEgeaFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 121 YLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWIT 200
Cdd:TIGR01974 113 YSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYF 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 201 GSLEFRDLFKIANNwipnnEINSLLTILCaFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARL 280
Cdd:TIGR01974 193 GTLNFQEVFALAPG-----AFFSALTLIC-LLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVART 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 281 LPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGS 360
Cdd:TIGR01974 267 SPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGA 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 361 GSVIHSMEplvgyspdKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSW--LYSPFFGIIASFT 438
Cdd:TIGR01974 347 GSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIG 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 439 AGLTAFYMFRIYLLTFDGYLRVHfqnysstkedslysislwgkriskgvnrdfvlstaksgvsffsqnlSKIHvntgnri 518
Cdd:TIGR01974 419 AFLTAFYSFRLIFMVFHGKERHE----------------------------------------------ADAH------- 445
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 519 gsfstslgtkntfvyPHEPGNTMLFPLLILLLCTLFIGSIGIHFDNEIGELtilskwltpsinFFQESSNSSINSYEFIT 598
Cdd:TIGR01974 446 ---------------PHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKGV------------LPTSAEPALEHHHVPAL 498
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 599 NAISSVSLAIFGLFIAYMFYgsaysffqnldlinsfVKGGPKKYFFHQLKKKIYSWSYNRGYIDIFYTRTFTLGIRGLTE 678
Cdd:TIGR01974 499 EIWSPTAVAILGILLAYLLY----------------LGNPTLPAKIAQRHSGLYRLLLNKWYFDELYDKVFVKPYLFLGK 562
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 378758457 679 -LTQFFDKGVIDGITNGVGLASFCIGEEIKYVGGGRISSYLFFFL 722
Cdd:TIGR01974 563 lLWKDPDDKIIDGFGPGIARLVGAISKRLRKSQTGYLRWYAASMV 607
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
63-454 |
2.27e-116 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 363.56 E-value: 2.27e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 63 INGSSIYQYLWSWTVNNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSS 142
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 143 NLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNEIn 222
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 223 sllTILCaFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTL 302
Cdd:MTH00210 211 ---TIIC-LLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 303 FLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspDKSQNMV 382
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMR 358
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 378758457 383 LMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSW--LYSPFFGIIASFTAGLTAFYMFRIYLLTF 454
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdkYYIAFAYWLGSFSALLTAFYSIRLIYLTF 432
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
63-454 |
1.72e-110 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 347.83 E-value: 1.72e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 63 INGSSIYQYLWSWTVNNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSS 142
Cdd:MTH00020 52 FNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 143 NLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFkianNWIPNNEIN 222
Cdd:MTH00020 132 NYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVF----NMVVSAPSS 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 223 SLlTILCaFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTL 302
Cdd:MTH00020 208 DI-TLIC-LFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTV 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 303 FLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspDKSQNMV 382
Cdd:MTH00020 286 FFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL--------SDEQDMR 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 378758457 383 LMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSW--LYSPFFGIIASFTAGLTAFYMFRIYLLTF 454
Cdd:MTH00020 358 KMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFgqYYLIFAYWLGCFSALLTAFYSIRLIYLTF 431
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
448-684 |
6.99e-104 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 318.02 E-value: 6.99e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 448 RIYLLTFDGYLRVHFQNYSSTKEDSLYSISLWGKRISKGVNRDFVL-----STAKSGVSFFSQNLSKIHVNTGNRIGSFS 522
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTlllltMNNNEKVSFFSKKTYRIDGNVRNMTRPFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 523 TS--LGTKNTFVYPHEPGNTMLFPLLILLLCTLFIGSIGIHFDNEIGELTILSKWLTPSINFFQESSNSSINSYEFITNA 600
Cdd:pfam01010 81 TIthFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFVTNA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 601 ISSVSLAIFGLFIAYMFYGSAYSFFQNLDLINSFVKGGPKKYFFHQLKKKIYSWSYNRGYIDIFYTRTFTLGIRGLTELT 680
Cdd:pfam01010 161 IFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAELT 240
|
....
gi 378758457 681 QFFD 684
Cdd:pfam01010 241 HFFD 244
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
73-460 |
4.79e-91 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 296.48 E-value: 4.79e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 73 WSWTVNNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWE 152
Cdd:MTH00211 61 WSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 153 LVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFkiannwipnneINSLLTILCAFL 232
Cdd:MTH00211 141 GVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLG 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 233 LFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQ 312
Cdd:MTH00211 210 LLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQ 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 313 RDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspDKSQNMVLMGGLRKYIP 392
Cdd:MTH00211 290 NDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLP 361
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 378758457 393 ITRTCFLWGTLSLCGIPPLACFWSKDEILSNswLYSPFFGIIASFTA----GLTAFYMFRIYLLTFDGYLRV 460
Cdd:MTH00211 362 FTSSCLFLGSLALMGFPFLSGFFSKDLILES--MNGSYLNAWALLLTllatSLTAAYSFRLIFLSLGGYPRF 431
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-440 |
2.39e-86 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 273.81 E-value: 2.39e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 141 SSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNE 220
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 221 INslltiLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLIARLLPLF-ISLPLIMSFISLIG 298
Cdd:pfam00361 81 LL-----LLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 299 TLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVIHSMEplvgysp 375
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 378758457 376 dKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAG 440
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
10-421 |
4.86e-86 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 285.31 E-value: 4.86e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 10 VIPLLPLPVIMSMGFGLFLVPTATKNLRRIWAFPSVLLLSIAMVFSVhlsiqQINGSSIYQYLWSWTVNNDFSLEFGYLI 89
Cdd:MTH00032 4 LVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEV-----LINDAVVHIELYKWIESEIFITHIGLLY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 90 DPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRP 169
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 170 IAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEF---------RDLFKIANNWIPNNEINSLLTILCAFLLFLGAVAK 240
Cdd:MTH00032 159 QANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFltfnggsvgSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCIGK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLA 320
Cdd:MTH00032 239 SAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 321 YSTMSQLGYMMLALGI-GSYQAALFHLITHAYSKALLFLGSGSVIHSMEPlvgyspdKSQNMVLMGGLRKYIPITRTCFL 399
Cdd:MTH00032 319 YSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-------DEQDMRKMGGLIHSIPFTYTMML 391
|
410 420
....*....|....*....|..
gi 378758457 400 WGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00032 392 IGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
6-733 |
1.52e-81 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 271.78 E-value: 1.52e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 6 QYAWVIPLLPLpvimsMGfGLFLVPTATKNLRRIWAFPS----VLLLSIAMVFSVhLSIQQINGSSIYQYLWSWTVNNDF 81
Cdd:PRK07390 7 QTSWLIPLYGL-----IG-ALLSLPWSPGIIRRTGPRPAaylnLLMTLLAFVHSL-LALRAIWNQPPQQLSFPWLQVADL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 82 SLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLL 161
Cdd:PRK07390 80 DLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 162 IGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFkianNWIPNNEINSLLTILCAFLLFLGAVAKS 241
Cdd:PRK07390 160 VGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLA----AWAATANLDPLTATLLGLALIAGPTGKC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 242 AQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAY 321
Cdd:PRK07390 236 AQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSY 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 322 STMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSmeplvgyspDKSQNMVLMGGLRKYIPITRTCFLWG 401
Cdd:PRK07390 315 STSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TITQDLTELGGLWSRMPATTLAFLVG 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 402 TLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFdgylrvhfqnysstkedslysislWGK 481
Cdd:PRK07390 386 SAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVF------------------------LGK 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 482 RISKGVNRDFVL-STAKSGVSFFSQNLskihvntgnrigsfstslgtkntfvypHEPgntmlfpllilllctlfigsigi 560
Cdd:PRK07390 442 PQQKTRRSPEVLwPMALPMVILAGFTL---------------------------HLP----------------------- 471
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 561 hfdneigelTILSKW-LTPsinffqesSNSSINSYEFITNAISSVslaiFGLFI-AYMFYGSAYS--------FFQNLdL 630
Cdd:PRK07390 472 ---------LLLQQWgLLP--------SWEALNLWAAPLLVASGL----LGVLLgAWIYLNKAWSrpiqlplrFLQDL-L 529
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 631 INSFvkggpkkyffhqlkkkiyswsynrgYIDIFYTRTFTLGIRGLTELTQFFDKGVIDGITNGVGLASFCIGEEIKYVG 710
Cdd:PRK07390 530 AYDF-------------------------YTDRLYRLTIVFVVALISRLTAWFDRYVVDGLVNLVGLATLFSGQGLKYSV 584
|
730 740
....*....|....*....|...
gi 378758457 711 GGRISSYLFFFLCYVSVFLFFFL 733
Cdd:PRK07390 585 SGQSQFYVLTILLGVALLGALLL 607
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
114-461 |
1.01e-80 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 269.34 E-value: 1.01e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 114 YMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGI 193
Cdd:MTH00004 107 YMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 194 LGFFWITGSLEFRDLFkiannwiPNNEINSLLTILcaflLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 273
Cdd:MTH00004 187 AWLAMTLNTWEIQQLF-------SPTQTPTLPLLG----LILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAG 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 274 IFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSK 353
Cdd:MTH00004 256 IFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFK 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 354 ALLFLGSGSVIHSMeplvgyspDKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKD---EILSNSWLYSpf 430
Cdd:MTH00004 336 AMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNA-- 405
|
330 340 350
....*....|....*....|....*....|..
gi 378758457 431 FGIIASFTA-GLTAFYMFRIYLLTFDGYLRVH 461
Cdd:MTH00004 406 WALLLTLLAtSFTAAYSLRMILLVQTGFPRTP 437
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
42-454 |
3.03e-79 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 266.07 E-value: 3.03e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 42 FPSVLLLSIAMVFSVHLSIQQINGS-SIYQYLWSWTVNNDFSLEFGYLIDpltsIMLILITTVGILV----LIYSDDYMS 116
Cdd:MTH00208 57 FSISLLKTLAFLSLINLLIWILLGCpNINISLSNWLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYMS 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 117 HDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGF 196
Cdd:MTH00208 133 NDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLS 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 197 FWITGSLEFrdlfkiaNNWIPNNEINSLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFL 276
Cdd:MTH00208 213 LINFNSWNL-------NEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 277 IARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALL 356
Cdd:MTH00208 286 LIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAML 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 357 FLGSGSVIHSMeplvgyspDKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSwLYSP--FFGII 434
Cdd:MTH00208 366 FLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAG-LASIsnLLSII 436
|
410 420
....*....|....*....|.
gi 378758457 435 ASFTAGL-TAFYMFRIYLLTF 454
Cdd:MTH00208 437 LALIATLlTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
73-449 |
4.21e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 262.15 E-value: 4.21e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 73 WSWTVNNDFSLEFGYLIDpLTSIMLI---LITTVGILVliYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYF 149
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFD-QYSIIFLpiaLFVTWSILE--FAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFI 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 150 FWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNwipnneinSLLTILC 229
Cdd:MTH00066 141 GWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDN--------STLPLLG 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 230 aflLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLA 309
Cdd:MTH00066 213 ---LILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 310 LAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspDKSQNMVLMGGLRK 389
Cdd:MTH00066 290 LTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQK 361
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 378758457 390 YIPITRTCFLWGTLSLCGIPPLACFWSKDEILS-------NSWlySPFFGIIA-SFtaglTAFYMFRI 449
Cdd:MTH00066 362 ALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEamntsnlNSW--ALILTLIAtSF----TAVYSFRI 423
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-450 |
3.96e-76 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 251.99 E-value: 3.96e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 11 IPLLPLPVIMSMGFGLFLVPTATK-NLRRIWAFPSVLLLsiaMVFSVHLSIQQINGSSIYQYLWSWTVNNDFSLEfgylI 89
Cdd:COG0651 2 SHLLILPVLLPLLAAALLLLLGRRrRLQRALSLLASLAL---LALALALLLQVLAGGPLVYALGGWPAPFGIVLV----A 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 90 DPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRP 169
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 170 iAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIAnnwipnNEINSLLTILCAFLLFLGAVAKSAQFPLHVW 249
Cdd:COG0651 155 -ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFW 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 250 LPDAM-EGPTPISALIHAAtMVAAGIFLIARLLPLFIS---LPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMS 325
Cdd:COG0651 228 LPDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLFGadpALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVS 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 326 QLGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLRKYIPITRTCFLWGT 402
Cdd:COG0651 307 QIGYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGA 377
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 378758457 403 LSLCGIPPLACFWSKDEILSNSWLYSPFFGIIAS-FTAGLTAFYMFRIY 450
Cdd:COG0651 378 LALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLlLSSLLTLAYFVRIF 426
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-441 |
1.82e-73 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 253.30 E-value: 1.82e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 80 DFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSY 159
Cdd:PRK12647 53 SLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 160 LLIGFWFTRPIA-ASACQKAFVTNrVGDFGLLLGILGFFWITGSLEFRDLFKiANNWIPNNEINSLLTILcaflLFLGAV 238
Cdd:PRK12647 133 LLIGFNHEREAArRAALQALLVTG-GGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREHPLYLAILLL----VLGGAF 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRS 318
Cdd:PRK12647 207 TKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLI 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 319 LAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSVIHSmeplVGyspdkSQNMVLMGGLRKYIPITR 395
Cdd:PRK12647 287 LAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGLRRAMPITA 357
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 378758457 396 TCFLWGTLSLCGIPPLACFWSKDEI---LSNSWLYSPFFGIIASFTAGL 441
Cdd:PRK12647 358 AAALLAALSMAGLPPLFGFLAKELIyeaLLEAPLWSLILTVAAVLGNAL 406
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
114-449 |
4.62e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 248.98 E-value: 4.62e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 114 YMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLllgI 193
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---I 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 194 LGFFWI---TGSLEFRDLFKIANNwipnneinsLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 270
Cdd:MTH00137 188 LAMAWMatnLNSWEIQQIFALSKD---------FDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 271 AAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHA 350
Cdd:MTH00137 259 VAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHA 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 351 YSKALLFLGSGSVIHSMeplvgyspDKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEI---LSNSWL- 426
Cdd:MTH00137 339 FFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLn 410
|
330 340
....*....|....*....|....*
gi 378758457 427 -YSPFFGIIA-SFtaglTAFYMFRI 449
Cdd:MTH00137 411 aWALTLTLIAtSF----TAVYSLRV 431
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
114-459 |
1.47e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 241.68 E-value: 1.47e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 114 YMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGI 193
Cdd:MTH00108 107 YMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 194 LGFFWITGSLEFRDLFKIANNwipnneiNSLLTILCaflLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 273
Cdd:MTH00108 187 AWFLLNLNSWDLQQIFMLNPN-------NSNLPLMG---LLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAG 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 274 IFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSK 353
Cdd:MTH00108 257 VFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFK 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 354 ALLFLGSGSVIHSMeplvgyspDKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEIL-------SNSWL 426
Cdd:MTH00108 337 AMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIeaantsyTNAWA 408
|
330 340 350
....*....|....*....|....*....|...
gi 378758457 427 YSpfFGIIASftaGLTAFYMFRIYLLTFDGYLR 459
Cdd:MTH00108 409 LL--ITLIAT---SLTAAYSTRIIFFALLGQPR 436
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
27-417 |
9.97e-69 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 240.98 E-value: 9.97e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 27 FLVPTATKNLRRIWAFPSVLLLSIAMV--FSVHLSIQQINGSSIYQYLWSWTVNNDFSLefgyLIDPLTSIMLILITTVG 104
Cdd:PRK12645 16 LLIPFLYKYFKRIHTGWFVLPVPVVLFiyFLSLIPTTMSGNTVMKTLPWIPSLGINFTL----YVDGLSLLFALLITGIG 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 105 ILVLIYSDDYMS-HDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNR 183
Cdd:PRK12645 92 SLVVLYSIYYLSkKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 184 VGDFGLLLGILGFFWITGSLEFRDLFKIANNWIpnneiNSLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISAL 263
Cdd:PRK12645 172 FGGLSMLGGFILLYIMTGSFSIREMIANADEIQ-----NSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAY 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 264 IHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS----Y 339
Cdd:PRK12645 247 LHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAaslhY 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 340 Q------------AALFHLITHAYSKALLFLGSGSVIHSmeplVGyspdkSQNMVLMGGLRKYIPITRTCFLWGTLSLCG 407
Cdd:PRK12645 327 QgddskiyaaaitAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGLMTIMPITFTIALIGALSMAG 397
|
410
....*....|
gi 378758457 408 IPPLACFWSK 417
Cdd:PRK12645 398 LPPFNGFLSK 407
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
24-434 |
4.09e-67 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 229.09 E-value: 4.09e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 24 FGLFLVPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWtvnNDFSLeFGYLIDPLTSIMLILITTV 103
Cdd:PRK06525 12 FIGALVVFFLPGRRAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNL---GDVAL-FGLVIDPVSVLIGFVVVLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 104 GILVLIYSDDYMS-------HDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTrPIAASACQ 176
Cdd:PRK06525 88 GLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKALRSAL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 177 KAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANnwipnneinSLLTILCAFLLFlGAVAKSAQFPLHVWLPDAMEG 256
Cdd:PRK06525 167 KALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHG---------SLKYLVFLGILF-AAWGKSAQLPFYSWLPDAMEA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 257 PTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFI-SLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALG 335
Cdd:PRK06525 237 PTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVgAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLS 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 336 IGSY------QAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIP 409
Cdd:PRK06525 317 LAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVP 387
|
410 420
....*....|....*....|....*
gi 378758457 410 PLACFWSKDEILSNSWLYSPFFGII 434
Cdd:PRK06525 388 PFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
81-450 |
1.63e-66 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 234.74 E-value: 1.63e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYL 160
Cdd:TIGR00940 65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 161 LIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIpnneiNSLLTILCAFLLFLGAVAK 240
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIR-----NSPLFGTAMVLVLLGAFTK 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLA 320
Cdd:TIGR00940 220 SAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 321 YSTMSQLGYMMLALGIGS----------------YQAALFHLITHAYSKALLFLGSGSVIHSmeplvgyspDKSQNMVLM 384
Cdd:TIGR00940 300 FSTISQLGLIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKL 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 385 GGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILS-------------NSWLY-SPFFGIIAS-FTAGLTAFYMFRI 449
Cdd:TIGR00940 371 GGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfdtVTLGYlFPYVATVASvFTFVYSLRFIHGV 450
|
.
gi 378758457 450 Y 450
Cdd:TIGR00940 451 F 451
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
10-417 |
2.88e-65 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 233.54 E-value: 2.88e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 10 VIPLLPLpvimsmgFGLFLVPTATKNLRRI--WAFPSVLLLSIAMVFSVHlsiQQINGSSIYQYLWSWTvnNDFSLEFGY 87
Cdd:PRK12648 5 LLVLLPF-------LGALLAALLPRNARNAeaWLAGLVALAALVLLALLY---PAVAAGEVIRAEIEWL--PALGLNLSL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 88 LIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFT 167
Cdd:PRK12648 73 RLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHH 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 168 RPIAASACQKAFVTNRVGDFGLLLGILGFFWITGS------LEFRDLFKiANNWIPnneinsllTILCafLLFLGAVAKS 241
Cdd:PRK12648 153 RADARRGARMALTVTGAGGLALLAGVLLLGHIVGSydldvvLAAGDLIR-AHPLYP--------PALV--LILLGAFTKS 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 242 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAY 321
Cdd:PRK12648 222 AQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAY 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 322 STMSQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLRKYIPITRTCF 398
Cdd:PRK12648 302 STISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHET---------GTRDMRRLSGLRRLMPITATLA 372
|
410
....*....|....*....
gi 378758457 399 LWGTLSLCGIPPLACFWSK 417
Cdd:PRK12648 373 MVAAAAMAGVPLLNGFLSK 391
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
83-418 |
3.78e-62 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 222.78 E-value: 3.78e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 83 LEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLI 162
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 163 GFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKiaNNWIPNNEINSLLTILCAFLLFLGAVAKSA 242
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQ--DSELIENIKGHPLFLITLILIFIGAAAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYS 322
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 323 TMSQLGYMMLALGIGSYQ-------AALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLRKYIPITR 395
Cdd:PRK12649 310 TISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEA---------ATRDIRKLGGLRKEMPITF 380
|
330 340
....*....|....*....|...
gi 378758457 396 TCFLWGTLSLCGIPPLACFWSKD 418
Cdd:PRK12649 381 IVASIAALAMAGIPPLNGFLSKE 403
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
73-417 |
1.71e-60 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 220.18 E-value: 1.71e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 73 WSWTVnnDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYL-RFFVYISFFNTSMLGLVTSSNLIQIYFFW 151
Cdd:PRK12644 58 VPWIP--SLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYVFW 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 152 ELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLfkIANNWipnneiNSLLTILCAF 231
Cdd:PRK12644 136 ELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSEL--LADPP------TGPAVSVAVV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 232 LLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALA 311
Cdd:PRK12644 208 LILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALR 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 312 QRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHL---ITHAYSKALLFLGSGSVIHSmeplVGyspdkSQNMVLMGGLR 388
Cdd:PRK12644 288 QHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG-----TRDIRKLSGLG 358
|
330 340
....*....|....*....|....*....
gi 378758457 389 KYIPITRTCFLWGTLSLCGIPPLACFWSK 417
Cdd:PRK12644 359 RRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
106-478 |
1.82e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 213.47 E-value: 1.82e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 106 LVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIgFWFTRPIAASACQKAFVTNRVG 185
Cdd:MTH00165 69 MVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIG 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 186 DFGLLLGIlGFFWITGSLEFrdlfkianNWIPNNEINSLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIH 265
Cdd:MTH00165 148 DVAILLSI-AWMMNFGSWNF--------IFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVH 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 266 AATMVAAGIFLIARLLPLFISlPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFH 345
Cdd:MTH00165 219 SSTLVTAGVYLLIRFNNLLFS-SFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFH 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 346 LITHAYSKALLFLGSGSVIHSMeplvgyspDKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKD---EILS 422
Cdd:MTH00165 298 LLTHALFKALLFLCAGSIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVS 369
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 378758457 423 NSWLySPFFGIIASFTAGLTAFYMFRIYLLTFDGYLrVHFQNYSSTKEDSLYSISL 478
Cdd:MTH00165 370 MSNL-NFFIFFLFFFSTGLTVSYSFRLIYYSMSGDF-NLKSLNNLSDESKFMLKSM 423
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
45-454 |
8.65e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 208.73 E-value: 8.65e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 45 VLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTVNNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRF 124
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 125 FVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPiAASACQKAFVTNRVGDFGLLLGILGFFWItgsle 204
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIAWMLMH----- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 205 frdlfkiaNNW-IPNNEINSLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPL 283
Cdd:MTH00209 160 --------GNWnIFYLNFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPS 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 284 FISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSV 363
Cdd:MTH00209 232 LFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 364 IHSMEplvgyspdKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILsNSWLYSPFFGIIAS---FTAG 440
Cdd:MTH00209 312 IHSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESNMPIMTLIlmfLSTS 382
|
410
....*....|....
gi 378758457 441 LTAFYMFRIYLLTF 454
Cdd:MTH00209 383 LTAAYSMRLSYFSL 396
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
83-418 |
2.97e-57 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 208.84 E-value: 2.97e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 83 LEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYL-RFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLL 161
Cdd:PRK12646 70 INLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 162 IGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIpnneiNSLLTILCAFLLFLGAVAKS 241
Cdd:PRK12646 150 ISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIK-----NHGLFIPMIFMFLLGAFTKS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 242 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAY 321
Cdd:PRK12646 225 AQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAY 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 322 STMSQLGYMMLALGIG-----------------SYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLM 384
Cdd:PRK12646 305 STISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIRIL 375
|
330 340 350
....*....|....*....|....*....|....
gi 378758457 385 GGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKD 418
Cdd:PRK12646 376 SGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKE 409
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
44-451 |
2.28e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 199.61 E-value: 2.28e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 44 SVLLLSIA-MVFSVHLSIQQINgssiYQYLWSWTVNNDFS--LEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEG 120
Cdd:MTH00207 11 SYLLWFMSiLMFPLSLYLMMCN----KTILIEWEIFTISSspINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKF 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 121 YLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIgFWFTRPIAASACQKAFVTNRVGDFGLLLGIlgffwit 200
Cdd:MTH00207 87 LSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSI------- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 201 GSLEFRDLFKIANNWipNNEINSLLtILCaflLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARL 280
Cdd:MTH00207 159 GWTLNQGHWSITNMW--QTDMNNYI-ALS---IMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRF 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 281 LPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGS 360
Cdd:MTH00207 233 YPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCA 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 361 GSVIHSMEplvgyspdKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSwLYSPFFGIIAS---F 437
Cdd:MTH00207 313 GSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESS-LFYPHNSLMILmifL 383
|
410
....*....|....
gi 378758457 438 TAGLTAFYMFRIYL 451
Cdd:MTH00207 384 ATALTAAYSTRFTL 397
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-456 |
1.49e-53 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 193.39 E-value: 1.49e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 9 WVIPLLPLPVIMSMgFGLFLVPT---ATKNLRRIWAfpsVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTVNN------ 79
Cdd:PRK08376 2 LGEHLPPLLIIIPL-FGAFSMPIvslLGGKAREIWA---VLISFLTLIVALLVFYEVWNNGTIVYVLGAESPTLtlpfgs 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 80 -DFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCS 158
Cdd:PRK08376 78 gGFPIRIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIAS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 159 YLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLefrDLFKIANNWIPNNEINSLLtilcAFLLFLGAV 238
Cdd:PRK08376 158 YALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTL---NMAYLAVKMSENPTVVAKI----ALALFIAGL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 239 A-KSAQFPLHVWLPDAM-EGPTPISALIHAATmvAAGIFLIAR-LLPLF---ISLPLIMSFISLIGTLTLFLGATLALAQ 312
Cdd:PRK08376 231 AmKSGAVPVHMWLPDAYpAAPSSISAMLLVIK--QAGLYALARvLFSIYgpaINLATVGWVIIILGCLTMFVGVAMAVVQ 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 313 RDIKRSLAYSTMSQLGYMMLALGIG---------------SYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdK 377
Cdd:PRK08376 309 KDVKRLLAYHSVSQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET---------G 379
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 378758457 378 SQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDG 456
Cdd:PRK08376 380 TRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
44-449 |
2.01e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 193.91 E-value: 2.01e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 44 SVLLLSIAMVFSVHLSIQQINGSSiyqYLWSWTVNNDFSLEFGY--LIDPLTSIMLILITTVGILVLIYSDDYMSHDEGY 121
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSVSSCSFSFelVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 122 LRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFvTNRVGDFGLLLGILGF-FWIT 200
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLvLLGH 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 201 GSLEFRDLFKiannwipnneinslLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARL 280
Cdd:MTH00151 164 WSILSMWDFK--------------LSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRF 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 281 LPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGS 360
Cdd:MTH00151 230 FPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCA 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 361 GSVIHSMeplvgyspDKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSwLYSP---FFGIIASF 437
Cdd:MTH00151 310 GSIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESS-LMSPtslLMVLLMFV 380
|
410
....*....|..
gi 378758457 438 TAGLTAFYMFRI 449
Cdd:MTH00151 381 GVGLTALYSARL 392
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-456 |
6.55e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 185.95 E-value: 6.55e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 15 PLPVIMSmgFGLFLVPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSwtvnnDFSLEFG--YLIDPL 92
Cdd:PRK12667 11 ILLVLFA--FLLPLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYLFG-----GWPAPIGivYEVDLL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 93 TSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAA 172
Cdd:PRK12667 84 GALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAV 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 173 SACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDL-FKIANNWIPNNEI---NSLLTILCAFLLFLGAVA-KSAQFPLH 247
Cdd:PRK12667 164 EAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLsAKIRGLSFPLTGGlagNPPLALGVALALALWAFTiKAAIFPNH 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 248 VWLPDAM-EGPTPISALIhAATMVAAGIFLIARLL-------PLFISLPLIMSFISLI-GTLTLFLGATLALAQRDIKRS 318
Cdd:PRK12667 244 FWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIIlGAVSAIIGALMMVVQKDVKRL 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 319 LAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLRKYIPITR 395
Cdd:PRK12667 323 LAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKMPIAS 393
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 378758457 396 TCFLWGTLSLCGIPPLACFWSKdEILSNSWLYS--PFFGIIASFTAGLTAFYMFRIYLLTFDG 456
Cdd:PRK12667 394 FAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
24-447 |
3.08e-50 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 189.87 E-value: 3.08e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 24 FGLFLVPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSI-YQYLWSWTV-NNDFSLEFGYLIDPLTSIMLILIT 101
Cdd:PRK12650 10 LAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLLKELPPILDGDALtWSVTWIPDLlGNGVDVNLALRADALSLFFALLAL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 102 TVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFwfTRPIAASACQKAFVT 181
Cdd:PRK12650 90 VIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGEAGSIRTLIL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 182 NRVGDFGLLLGILGFFWITGSLEFRDLFKiANNWipnnEINSLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPIS 261
Cdd:PRK12650 168 TFFGGLTLLAAVAIAATQTGTTSLSGILH-SDVW----AEKPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVS 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 262 ALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS--- 338
Cdd:PRK12650 243 AFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTpfa 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 339 YQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKD 418
Cdd:PRK12650 323 LTAAVVHTLAHALFKSSLFMLIGVVDHQA---------GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKE 393
|
410 420 430
....*....|....*....|....*....|..
gi 378758457 419 EILSnSWLYSPF--FGIIA-SFTAGLTAFYMF 447
Cdd:PRK12650 394 GMLT-AFLEAPGgnAGVVLlLVGAALGAVFTF 424
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
16-454 |
4.30e-50 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 182.59 E-value: 4.30e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 16 LPVIMsmGFGLFLVPTATKNLRRIWAFpsvLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTVNNDFSLEFGYLIDPLTSI 95
Cdd:COG1008 12 LPLLG--ALLLLLLPRRNARLARWVAL---AVSLLTLLLSLYLLAGFDPGTGGFQFVESYPWIPSLGISYHLGVDGISLP 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 96 MLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFW-FTRPIAASA 174
Cdd:COG1008 87 LVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWgGERRIYAAI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 175 cqKAFVTNRVGDFGLLLGILGFFWITGSLEFrDLFKIANNWIPNNeinslLTILCAFLLFLGAVAKSAQFPLHVWLPDA- 253
Cdd:COG1008 165 --KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLT-----AQLLLFLAFFIAFAVKVPMFPFHTWLPDAh 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 254 MEGPTPISAlIHAATMVAAGIFLIARL-LPLFislPLIMS----FISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLG 328
Cdd:COG1008 237 VEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PEASAyfapLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 329 YMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLRKYIPITRTCFLWGTLSL 405
Cdd:COG1008 313 FVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAALAS 383
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 378758457 406 CGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTF 454
Cdd:COG1008 384 LGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVF 432
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-449 |
8.03e-47 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 173.53 E-value: 8.03e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 13 LLPLPVIMSMGFGLFLV-PTATKNLRRIWAFpSVLLLSIAMVFSvhLSIQQINGSSIYQYLWSWTVNndFSLEFGylIDP 91
Cdd:PRK08375 5 LLPLLVAVPLLAAALIVlLPKRRRLRWALAL-LVAALTFALAIS--LLPQVLDGGVIAYVVGGWPPG--IGIELR--ADS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 92 LTSIMLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPiA 171
Cdd:PRK08375 78 LSALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR-A 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 172 ASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANnwipnnEINSLLTILcaFLLFLGAVAKSAQFPLHVWLP 251
Cdd:PRK08375 155 LAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF--GFVLLALALKAAVFPLHTWLP 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 252 DAMEGPTPISALIHAATMVAAGIFLIARLL-----PLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQ 326
Cdd:PRK08375 227 RAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQ 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 327 LGYMMLALGIGSY---QAALFHLITHAYSKALLFLGSGSVihsmeplvgYSPDKSQNMVLMGGLRKYIPITRTCFLWGTL 403
Cdd:PRK08375 307 MGYILLGLALLTPlalAAGLLHLLHHALMKGALFLAAGAI---------EVTYGTRRLSELSGLGRRMPLTAAAFAVASL 377
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 378758457 404 SLCGIPPLACFWSKDEILS-----NSWLYSPFFgIIASFtagLTAFYMFRI 449
Cdd:PRK08375 378 SLIGVPPTSGFVSKWYLVVgaveaGQWLVLAVL-LASSL---LALLYFLRI 424
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
11-449 |
5.47e-41 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 156.43 E-value: 5.47e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 11 IPLLPLPVIMSMGFGLFLVPTATKNLRRIWAFP-SVLLLSIAMVFSVhlsiqqingssiyqylwsWTVNNDFSLEFG--Y 87
Cdd:COG1007 5 LALLPEIILLLGALVLLLLDLFLPRRSRRLLAGlALLGLLLALALLL------------------LALGGGTGTAFGgmF 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 88 LIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTS-MLGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 166
Cdd:COG1007 67 VVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 167 TRPIAASACQKAFVTnrvGDFG---LLLGILGFFWITGSLEFRDLFKIannwIPNNEINSLLTILcAFLLFLGAVA-KSA 242
Cdd:COG1007 147 DDRRSSEAALKYFLL---GALSsgfLLYGISLLYGATGSLNLAGIAAA----LAAGGANSPLLLL-GLVLVLAGLAfKLS 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 243 QFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLIARLL-----PLFISLPLIMSFISLigtLTLFLGATLALAQRDIK 316
Cdd:COG1007 219 AVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveafpGLAADWQLLLAVLAV---LSMTVGNLAALAQTNVK 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 317 RSLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLgsgsVIHSMEplvgYSPDKSQNMVLMGGLRKYIPI 393
Cdd:COG1007 295 RMLAYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VILLLS----RKGGEAEEIEDLAGLARRSPL 366
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 378758457 394 TRTCFLWGTLSLCGIPPLACFWSKDEILSNSW---LYspFFGIIASFTAGLTAFYMFRI 449
Cdd:COG1007 367 LALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
89-456 |
1.22e-39 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 155.82 E-value: 1.22e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 89 IDPLTSIMLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFN----TSMLGLVTSSNLIQIYFFWELVGMCSYLLIGF 164
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEG--KGPGAMGFFYnlflASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 165 WFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFrDLFKIANnwiPNNEINSLltilcAFLL-FLGAVAKSAQ 243
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDF-AAMRAAH---LSPFWASL-----VFLLaLFGFGAKAGL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 244 FPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLIARLLPLFISLPLIM-SFISL-IGTLTLFLGATLALAQRDIKRSLA 320
Cdd:PRK06521 227 VPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWwGVLVLaLGAISAVLGVLYALAEHDLKRLLA 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 321 YSTMSQLGYMMLALGIG--------------SYQAALFHLITHAYSKALLFLGSGSVIHSMEplvgyspdkSQNMVLMGG 386
Cdd:PRK06521 306 YSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRDMEKLGG 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 387 LRKYIPITRTCFLWGTLSLCGIPPLACFWSK----DEILSNSWLYSPFFGIIA-------SFTAGLTAFYMFRIYLLTFD 455
Cdd:PRK06521 377 LIRRMPWTAWAFLIGCLAISALPPLNGFVSEwlllQSLLSSPGLPQWGLKLAVpiaaamlALTAALAAMCFVKFYGITFL 456
|
.
gi 378758457 456 G 456
Cdd:PRK06521 457 G 457
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-364 |
1.65e-39 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 153.32 E-value: 1.65e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 10 VIPLLPlPVIMSMGFGLFLV-PTATKNLRRIWAFPSVLLLSIAMVFSVHLSIqqingssiyqyLWSWTVNNDFSLefgyl 88
Cdd:PRK08168 5 VCALLP-AVLMSLAAGGLLLsRWLTRALWRIAQAASLAGLFLALLGLVLFAT-----------GAAWPAAAWLEV----- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 89 iDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTR 168
Cdd:PRK08168 68 -SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 169 PIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPnneinSLLTILCAFLLFLGAVAKSAQFPLHV 248
Cdd:PRK08168 147 PFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGA-----SPSLQAAALLLVLAVILKTAQLPVHG 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 249 WLPDAMEGPTPISALIHAAtMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLG 328
Cdd:PRK08168 222 WLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMG 300
|
330 340 350
....*....|....*....|....*....|....*.
gi 378758457 329 YMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVI 364
Cdd:PRK08168 301 FMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
11-449 |
2.15e-36 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 143.42 E-value: 2.15e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 11 IPLLPLPVIMSMGFGLFLVPTATKNlRRIWAFPSVLLLSIAMVFSVHLSIQQINGSsiyqylwswTVNNdfslefGYLID 90
Cdd:PRK05777 9 ILLLPELILLGAAVVLLLIDAFVRR-HSRRATLAVLALLLALVALLFVLGAAGGGT---------AFGG------MLVVD 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 91 PLTSIMLILITTVGILVLIYSDDYMShDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPI 170
Cdd:PRK05777 73 GFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRR 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 171 AASACQKAFVtnrVGDFG---LLLGILGFFWITGSLEFRDLFKIANNWIPNN--EINSLLTILCAFLLFLGAVaksaqfP 245
Cdd:PRK05777 152 SLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIAKALADGSGNSllLLFGLVFLLVGLAFKLSAV------P 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 246 LHVWLPDAMEG-PTPISALIHAATMVAAGIFLIARLLPLFISLPLIMS-FISLIGTLTLFLGATLALAQRDIKRSLAYST 323
Cdd:PRK05777 223 FHMWTPDVYEGaPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLSEDWQqVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 324 MSQLGYMMLALGIGS---YQAALFHLITHAYSKallfLGSGSVIHSMEPLVGYSPDKSQnmvlMGGLRKYIPITRTCFLW 400
Cdd:PRK05777 303 IAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAVMTI 374
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 378758457 401 GTLSLCGIPPLACFWSKDEILSNS------WLyspffGIIASFTAGLTAFYMFRI 449
Cdd:PRK05777 375 FMLSLAGIPPTAGFWGKFYVFEAAveaglwWL-----AVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
13-465 |
1.56e-35 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 140.85 E-value: 1.56e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 13 LLPLPVIMsmGFGLFLVPTATKNLRRIWAFPS---VLLLSIAMVFSVHLSiqqingSSIYQYLWSWTVNNDFSLEFGYLI 89
Cdd:TIGR01972 4 LIFLPLIG--ALLILLLPSNKDGKARWIALVValaTLLLSLLLLFQFDPT------GSGFQFTEDIPWIPALGISYHLGV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 90 DPLTSIMLILITTVGILVLIYSDDYMSHDEGYlrFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWfTRP 169
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGP 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 170 IAASACQKAFVTNRVGDFGLLLGILGFFWITGslefrDLFKIaNNWIPNNEINSLLTILcaFLLFLGAVA-KSAQFPLHV 248
Cdd:TIGR01972 153 NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGG-----GTFDL-LELLNLPLPFGVQTWL--FLAFFIAFAvKVPLFPLHT 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 249 WLPDAM-EGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMS-FISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQ 326
Cdd:TIGR01972 225 WLPDAHvEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFApVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 327 LGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVihsmeplvgYSPDKSQNMVLMGGLRKYIPITRTCFLWGTL 403
Cdd:TIGR01972 305 MGFVLLGIFSFnelGISGAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAM 375
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 378758457 404 SLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNY 465
Cdd:TIGR01972 376 ASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAE 437
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
66-417 |
2.72e-34 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 138.98 E-value: 2.72e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 66 SSIYQYLWSWTVN---------NDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFfnTSML 136
Cdd:PRK08668 35 PLLFLIKLYFTLKvgtgekltlFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 137 GLVTSSNLIQIYFFWELVGMCSYLLIgfWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDlfkIANNWI 216
Cdd:PRK08668 113 GVFLANDLLTLYIFWEIMTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAD---ISQGLI 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 217 PNNEINSLLTILcaFLLFLGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLIARLLP---------LF 284
Cdd:PRK08668 188 NDTSTGFALIVF--LFLLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsefgTY 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 285 ISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSG 361
Cdd:PRK08668 266 RGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFA 345
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 378758457 362 SVIHSMeplvgyspdKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSK 417
Cdd:PRK08668 346 AVIYRT---------GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-449 |
7.91e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 136.10 E-value: 7.91e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 75 WTVNNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHD--EGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWE 152
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 153 LVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNwipnneinsllTILCAFL 232
Cdd:PRK06589 147 LLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKN-----------QSIILLL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 233 LFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTL------TLFLGA 306
Cdd:PRK06589 216 MFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLifipivSIFYSS 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 307 TLALAQRDIKRSLAYSTMSQLGYMMLALGI---GSYQAALFHLITHAYSKALLFLGSGSVihsmeplvgYSPDKSQNMVL 383
Cdd:PRK06589 296 LKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDK 366
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 378758457 384 MGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEIL-----SNSWLYSPFFGIIASFTAGLTAFYMFRI 449
Cdd:PRK06589 367 LHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
11-456 |
1.47e-33 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 135.33 E-value: 1.47e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 11 IPLLPLPVIMSMGFGL---FLVPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTVNNDFSLEfgy 87
Cdd:PRK05846 3 WPLLSLLIFLPLIGGLlvlLTERFGARLARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHLG--- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 88 lIDPLTSIMLILITTVGILVLIYSDDYMSHDEGylRFFVYISFFNTSMLGLVTSSNLIQIYFFWE--LVGMcsYLLIGFW 165
Cdd:PRK05846 80 -VDGISLLLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVW 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 166 --FTRPIAASacqKAFVTNRVGDFGLLLGILGFFWI----TGSLEFRDLFKIAnnwIPNNEINSLltilcaFLLFLGAVA 239
Cdd:PRK05846 155 ggKNRIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLP---LPPGVQYWL------FLAFFIAFA 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 240 -KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF-LIARLLPLFISLPLIMS-FISLIGTLTLFLGATLALAQRDIK 316
Cdd:PRK05846 223 vKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDASHEFApIIITLGVIAIIYGALVALAQTDIK 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 317 RSLAYSTMSQLGYMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLRKYIPI 393
Cdd:PRK05846 303 KLIAYSSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPV 373
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 378758457 394 TRTCFLWGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDG 456
Cdd:PRK05846 374 LAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFG 436
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
81-467 |
5.07e-33 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 134.27 E-value: 5.07e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 81 FSLEFG-YLIDPLTSIMLILITtvgILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSY 159
Cdd:MTH00095 37 LSLKFNfYFNSLLFSLILLLVT---LSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 160 LLIGFWFTRPiAASACQKAFVTNRVGDFGLLLGILGFFWItgSLEFRDLFKIANNWIpnneinslltilcaFLLFLGAVA 239
Cdd:MTH00095 114 FLVLFYNNWD-SNSGAMNTALTNRIGDFFIFLFFSGFIFS--SYYFFSFSFFSSSMI--------------LMLLLTSFT 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLpLIMSFISLIGTLTLFLGATLALAQRDIKRSL 319
Cdd:MTH00095 177 KSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKKVV 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 320 AYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgYSPDKSQNMVLMGGLRKYIPITrtcFL 399
Cdd:MTH00095 256 ALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSN-----FGQQDGRNYSNNGNLPMFIQLQ---LL 327
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 400 WGTLSLCGIPPLACFWSKDEILSNSWL--YSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYSS 467
Cdd:MTH00095 328 VTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSS 397
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
22-437 |
5.62e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 133.15 E-value: 5.62e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 22 MGFGLFLVPTATKNLRRIWAFpsvlllsIAMVFSVHLSIQQINGSsiyqylwsWTVNNDFSLEFgyLIDPLTSIMLILIT 101
Cdd:PRK07234 15 LGFAIYLLPKLDRNLALGMAI-------VSAVYALGLVASMVPLE--------LTLLDNFGVTL--RADALSGYFILTNA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 102 TVGILVLIYSddymsHDEGYLRFFvyiSFFNTSMLGLV----TSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQK 177
Cdd:PRK07234 78 LVTLAVIFYC-----WESAKTRFF---YAQLLILHGSVnaafVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRY 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 178 AFVTNRVGDFgLLLGILGFFWITGSLEFRDLFKIANnwipnneinslltiLCAFLLFLGAVAKSAQFPLHVWLPDAMEGP 257
Cdd:PRK07234 150 LFYSNVAMLF-YLIGAVLVYQANGTFAFSGLATADP--------------EAFALIALGLLVKGGIFVSGLWLPLTHSEA 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 258 TPISALIHAATMVAAGIFLIARLLPLFISLPLImsfISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG 337
Cdd:PRK07234 215 EPPVSALLSGVVVKAGVFPLVRCALDVPGLDLI---VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 338 syqaALFHLiTHAYSKALLFLGSGSVihsmeplvgYSPDKSQNMVLMGGLRKYIPITRTCFlwgtlSLCGIPPLACFWSK 417
Cdd:PRK07234 292 ----GLYAL-AHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLTMASF-----SIAGFPLLAGFVSK 352
|
410 420
....*....|....*....|....*.
gi 378758457 418 DEILSN--SW----LYSPFFGIIASF 437
Cdd:PRK07234 353 VLTLKNllPWqaiaLNLAAVGTAASF 378
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
35-432 |
1.42e-32 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 134.09 E-value: 1.42e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 35 NLRRIWAFPSVL-LLSIAMVFSVHLSIQQINGSSIYQYLWSWTVNNDFSLEfgylIDPLTSIMLILITTVGILVLIYSDD 113
Cdd:PRK08667 24 RHKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFH----IDRLAAFFIILIGLVSLCVAIYSLG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 114 YMSHDEGYLRFFV---YISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLL 190
Cdd:PRK08667 100 YNEHMSSNERANLlsaLTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLM 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 191 LGILGFFWITGSLEFrdlfkiannwiPNNEINSLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATM 269
Cdd:PRK08667 180 LGIIVLFIQTGSFEL-----------SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVM 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 270 VAAGIFLIARLLPLFISLPLIMSF-ISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG----------- 337
Cdd:PRK08667 248 LKVAVYGLVRFLMDVLSPELWWGVlILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYvifgvygldtl 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 338 ---SYQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACF 414
Cdd:PRK08667 328 allALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGF 398
|
410
....*....|....*...
gi 378758457 415 WSkdEILsnswLYSPFFG 432
Cdd:PRK08667 399 AS--ELL----LYESFFQ 410
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
89-443 |
1.84e-32 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 131.81 E-value: 1.84e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 89 IDPLTSIMLILITTVGILVLIYSDDYMSHD--EGYLRFFVYISFFNTsmlGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 166
Cdd:PRK08377 76 IGPFAALFVLIIAIVSFIMSIFSLKAVEVEpiDKYAMLFLLLMLGAT---GMIATGDIFNLFVFMEITAITAYALTAYNK 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 167 TRPiAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNwipnneINSLLTILCAFLLFLGAVAKSAQFPL 246
Cdd:PRK08377 153 TGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT------IDPTVAQVGLALLIFGLAVEAELFPL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 247 HVWLPDAMEG-PTPISALIhAATMVAAGIFLIARLLPLFISLPLIMSFISLI---GTLTLFLGATLALAQRDIKRSLAYS 322
Cdd:PRK08377 226 NAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLKLViimATLTVFFAELSALRQKNVKRMIAYS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 323 TMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKSQNMVLMGGLRKYIPITRTCFL 399
Cdd:PRK08377 305 SIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALT 375
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 378758457 400 WGTLSLCGIPPLACFWSKdeilsnswlyspFFGIIASFTAGLTA 443
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSK------------FRIILAGLSAGYTW 407
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
88-439 |
1.29e-30 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 126.20 E-value: 1.29e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 88 LIDPLTSIMLILITTVGILVLIYSDDYMSHD-------EGYLRFfvYISFFNT---SMLGLVTSSNLIQIYFFWELVGMC 157
Cdd:PRK06458 66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHEvehgelsPVTLRL--YYGMYQLflfTMLLALTSNNLGLMWVAIEATTLS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 158 SYLLIGFWFTRPiAASACQKAFVTNRVGD----FGLLLGILGFFWITGS----LEFRDLFKIANNWIPnneinSLLTILC 229
Cdd:PRK06458 144 SALLVGIYRTRA-SLEAAWKYIIICSVGVafalFGTILVYANAATVMGDgemaILWTELLKHASLLDP-----TLMKLAF 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 230 AFLLfLGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAA-------GIFLIARLLPLFISlPLIMSFisliGTLT 301
Cdd:PRK06458 218 VFLL-IGFGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVAlyavlryYILIDAAIGSDFPG-RLLLIF----GLLS 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 302 LFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLGSGSVIHSMeplvgyspdKS 378
Cdd:PRK06458 292 VLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------GT 362
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 378758457 379 QNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNS-----WLYSPF--FGIIASFTA 439
Cdd:PRK06458 363 RDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGlargpLLIAILllLLLTLAFAA 430
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-457 |
1.66e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 120.05 E-value: 1.66e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 13 LLPLPVIMSMGFGLFLVptATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTVnnDFSLEFgyLIDPL 92
Cdd:PRK07691 5 LVILPILIPVITAILLI--FLGKRPIIQRYVALIGSLLTLVAAIILVANVYKHGIQTLELGNWKA--PFGIVF--VADMF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 93 TSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRpIAA 172
Cdd:PRK07691 79 AALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 173 SACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDL-FKIANNwipNNEINSLLTILCAFLLFLGAVaKSAQFPLHVWLP 251
Cdd:PRK07691 158 RESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADIsVKIAEL---SAGQTGLITVVAILFLFVFAT-KAGLFPLYFWLP 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 252 DAMEGP-TPISALIhAATMVAAGIFLIARLLPLFIS--LPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLG 328
Cdd:PRK07691 234 GSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 329 YMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVIHsmepLVGYSPDKSqnmvlMGGLRKYIPITRTCFLWGTLSL 405
Cdd:PRK07691 313 VILVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSL 383
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 378758457 406 CGIPPLACFWSKDEILSNSWLYSPF-FGIIASFTAGLTAFYMFRIYLLTFDGY 457
Cdd:PRK07691 384 AGIPPLSGFYGKFFIVEGTFEAGFYvSGIIVLLSSLLVLYSVIKIFLKGFWGE 436
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
72-449 |
5.71e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 118.13 E-value: 5.71e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 72 LWSWTVNNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDE-GYLRFFVYISFFNTSMLGLVTSSNLIQIYFF 150
Cdd:TIGR01770 51 LTLQYAAYLFTGFSFFIVDNFALLIKLILLLSTLLTFFFALSYLSKEKiNKFEFYILLLFALLGIFLLVSSNDLLSIYLG 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 151 WELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNEInslltILCA 230
Cdd:TIGR01770 131 LELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNISL-----LLLG 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 231 FLLFLGAVA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAA-GIFLIARLLPLFISLPLIMSFISLIGTLTLFLGAT 307
Cdd:TIGR01770 206 IVLILVGLLfKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNF 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 308 LALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFlgsgSVIHSMEplvGYSPDKSQNMVLM 384
Cdd:TIGR01770 286 GALAQKKVKRLLAYSSISHVGYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLR---SYKDEWIEYISDF 358
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 378758457 385 GGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEI---LSNSWLYspFFGIIASFTAGLTAFYMFRI 449
Cdd:TIGR01770 359 AGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVffaLLKSGLY--WLAVIAVLTSVIGAFYYLRV 424
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
24-422 |
5.87e-27 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 116.15 E-value: 5.87e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 24 FGLFLVPTATKNLRRIWAfPSVLLLSIAMVFSVHLSIQqingsSIYQYLwswtvnnDFSLEFgYLIDPLTSIMLILITTV 103
Cdd:PRK12668 14 AGALLVPFLPGRARKALL-LLAPVLAVLAVLTVPEGTY-----LTVTFL-------GFDLVL-GRVDKLSRVFGLIFGIM 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 104 GILVLIYSddYMSHDEG-YLRFFVYISffntSMLGLVTSSNLIQIYFFWELVGMCSYLLIgfWFTR-PIAASACQKAFVT 181
Cdd:PRK12668 80 AFIGVIYA--LHVKDPGqHVAALLYVG----SALGAVFAGDLLTLFVFWELMAFTSTFLV--WARGtKAAVRAGFRYLLV 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 182 NRVGDFGLLLGILGFFWITGSLEFRDLFkiannwipnneinsLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPIS 261
Cdd:PRK12668 152 HVLGGVLLLAGILLHYAETGSFAFGAIA--------------GLGGTAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTG 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 262 ALIHAATMVAAGIFLIARLLPLFISLplimsfISLIGTLTLFlGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQA 341
Cdd:PRK12668 218 SVFLSAFTTKTAVYALARAFPGTELL------IYIGAAMAVY-GVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALA 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 342 ---ALFHLITHAYSKALLFLGSGSVIHSmeplVGYSpdksqNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKD 418
Cdd:PRK12668 291 ingAVAHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKS 361
|
....
gi 378758457 419 EILS 422
Cdd:PRK12668 362 MIIS 365
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
89-364 |
2.52e-25 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 110.51 E-value: 2.52e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 89 IDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISF--FNTSMLGLvtSSNLIQIYFFWELVGMCSYLLIG--- 163
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGlnk 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 164 FWftRPIAASACQKAFVTNrVGDFGLLLGILGFFWITGslEFRDLFKIANNWIPNneINSLLTILCAFLLFLGAVAKSAQ 243
Cdd:PRK08601 148 GW--KVAREAAKISGMLFL-ISWLALALAIVWLFIATG--EWQLTSVLSNENLAQ--LGTWEKTGINLLLILAVMIPAAQ 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLiARLLPLF-----ISLPLIMSFISLIgtltlfLGATLALAQRDIKRS 318
Cdd:PRK08601 221 WPFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFhddiaQILLLIFASISVL------IGTGISLVQVDYKRQ 293
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 378758457 319 LAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVI 364
Cdd:PRK08601 294 LVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
16-449 |
2.55e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 107.13 E-value: 2.55e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 16 LPVIMSMGFGLflvptaTKNLRRIWAFpSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTVNNDFSLEfgylIDPLTSI 95
Cdd:PRK12662 12 IPLLSAVVCAL------LKNRKLVKII-SCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VDILSAT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 96 MLILITTVGILVLIYSDdYMSHDE----GYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPiA 171
Cdd:PRK12662 81 MLVLVNFIAVMSVLYGI-YPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-A 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 172 ASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNEINslltiLCAFLLFLGAVAKSAQFPLHVWLP 251
Cdd:PRK12662 159 LVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQ-----IGVLFIMVGLFIKAALFPFHKWLI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 252 DAM-EGPTPISALIhAATMVAAGIFLIARLLP-------LFISLPLIMSFISLiGTLTLFLGATLALAQRDIKRSLAYST 323
Cdd:PRK12662 234 QAYsEAPSFISVFF-SGTSTKVMIYLIIRIVYdvfkanfVFTTLPFNNVFMIL-AALAIVFGSVLAILSKDIKRIFAYSS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 324 MSQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSVIHSMEplvgyspdkSQNMVLMGGLRKYIPITRTCFLW 400
Cdd:PRK12662 312 ISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFG---------TTKLEDCLNLWKSMPKITLAFVL 382
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 378758457 401 GTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIA-SFTAGLTAFYMFRI 449
Cdd:PRK12662 383 LSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVlLVGSGLSVIYVWKI 432
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
44-454 |
3.99e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 106.89 E-value: 3.99e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 44 SVLLLSIAMVFSVHLSIqqiNGSSIYQYLWSWTVNNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLR 123
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLF---LVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 124 FFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTrPIAASACQKAFVTNRVGDFGLLLgILGFFWITGSL 203
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGSG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 204 EFrdlfkiannwipnneinslltiLCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARlLPL 283
Cdd:MTH00063 156 SF----------------------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDY 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 284 FISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSV 363
Cdd:MTH00063 213 LLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 364 IhsmeplVGYSPDKSQNMVLMGGLRKYIPITRTCFLwgTLSLCGIPPLACFWSKDEILSN--SWLYSPFFGIIASFTAGL 441
Cdd:MTH00063 293 M------SGSGGSQSSNCVYSSILYGSWNLFYLFLL--VLGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVFL 364
|
410
....*....|...
gi 378758457 442 TAFYMFRIYLLTF 454
Cdd:MTH00063 365 SYLYSFRLCLILF 377
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
13-454 |
6.50e-23 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 103.11 E-value: 6.50e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 13 LLPLPVIMSMGFGLFLVptATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWtvnndfSLEFG--YLID 90
Cdd:PRK12663 5 LLILPMLLPLLCGLVLV--FLRNRDRLQRYLAIGTLTILTLISLALLIYVQRHGPITLDFGGW------LPPFGiqFTGD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 91 PLTSIMLILITTVGILVLIYSddYMSHDEGYLRFFVYiSFFNTSMLGLVTS---SNLIQIYFFWELVGMCSYLLIGFWFT 167
Cdd:PRK12663 77 SLSALMVTTASFVATAIMAYG--FGDIEHSGRRYGFP-PFILLLMAGVIGSfltGDLFNLYVWFEVMLIASFVLITLGQE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 168 RPIAASACQKAFVtNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNwipnNEINSLLTILcAFLLFLGAVAKSAQFPLH 247
Cdd:PRK12663 154 REQLRGAIKYVVL-NLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLND----MGDTATLTTI-ALLFLLAFGMKAALFPFM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 248 vWLPDAMEGP-TPISALIhAATMVAAGIFLIARLLP-LFISLPLIMSF-ISLIGTLTLFLGATLALAQRDIKRSLAYSTM 324
Cdd:PRK12663 228 -WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHPlLATMAAITMVIGALGALAYKDIRRIAGYQVI 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 325 SQLGYMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGSVIHsmepLVGYSPDKSqnmvlMGGLRKYIPITRTCFLWG 401
Cdd:PRK12663 306 SSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR----LTGYRSLQY-----LGGLYRKEPLFGALFLIL 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 378758457 402 TLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFY-MFRIYLLTF 454
Cdd:PRK12663 377 IFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYsLFRIFFLAY 430
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
13-451 |
6.36e-21 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 96.70 E-value: 6.36e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 13 LLPLPVIMSMGFGLFLVPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQiNGSSIYQYL-WSWTVNNDFSLEfgylIDP 91
Cdd:PRK07363 5 LLWLPILGAIIIGFFPGNLPSARLRQITLVFAVLVLAWSLFLLTQFDLSD-PGMQFQEYLpWNEPLGLSYSLG----VDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 92 LtSIMLILITTVGILVLIYSDDYMSHDEGYlrFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPiA 171
Cdd:PRK07363 80 L-SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-R 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 172 ASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFrDLFKIANNWIPNNEINSLLTilcafLLFLGAVAKSAQFPLHVWLP 251
Cdd:PRK07363 156 GYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSF-DYDAISTQNLSLNTQLILLT-----GLLLGFGIKIPLVPLHTWLP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 252 DAMEGPTPISALIHAATMVAAGIFLIARL-LPLFI-SLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGY 329
Cdd:PRK07363 230 DAYTEASPAVAILLGGVLAKLGTYGLLRFgLQLFPqTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGY 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 330 MMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVihsmEPLVGySPDKSQNMVLMGGLRKyIPITRTCFLWGTLSLC 406
Cdd:PRK07363 310 ILVAAAAGtqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVG-TRDLDVLNGLMNPIRG-LPLTSALLVLAGMASA 383
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 378758457 407 GIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYmFRIYL 451
Cdd:PRK07363 384 GIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY-FVILL 427
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
16-454 |
5.60e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 90.58 E-value: 5.60e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 16 LPVIMSMGFGLFLVPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYqylwswtvnndfslefgYLIDPLtSI 95
Cdd:PRK08676 5 YLLVALLFLRLGLLSRSHRLLNALALGHGLWHLGLSLWVLLVLPLPGYFMESRY-----------------LFIDHL-GI 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 96 MLILITTVG-ILVLIYSDDYMSH-------DEGYLRFFvYISFfntSMLGLVT-----SSNLIQIYFFWELVGMCSYLLI 162
Cdd:PRK08676 67 FVVLIASVVfILAALYARGYVDHllsngelDPENLKVF-YLGF---NLLLSVItfaffSDNLALFWIFAELTTVFSAMLI 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 163 GFWFTRPIAASACQKAFVTNRVGDFGLLlGILGFFWIT------GSLEFRDLFKIANnwipnnEINSLLTILCAFLLFLG 236
Cdd:PRK08676 143 AILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTELAAHAS------LLSPSVLGASFLFIFIG 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 237 AVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLIARLLPLFISLPLIMSFISLI---GTLTLFLGATLALAQ 312
Cdd:PRK08676 216 FLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEQFSNVLiglGIFSIAVAAFSMLSQ 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 313 RDIKRSLAYSTMSQLGYMMLALGIGSYQA---ALFHLITHAYSKALLFLGSGsVIHSMeplvgYSPDKSQNmvlMGGLRK 389
Cdd:PRK08676 295 RNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFDR---IFDVFR 365
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 378758457 390 YIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTF 454
Cdd:PRK08676 366 LQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
13-445 |
1.59e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 89.37 E-value: 1.59e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 13 LLPLPVIMSMGFGLFLVPTATKNLRRIwafpSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTVNNDFSLEFGYLIDPL 92
Cdd:PRK06473 5 LIWIPLLGAILIGFWPSGINGKLARSV----ALVIASVLLLLSLVLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 93 tSIMLILITTVGILVLIYSDDYMSHDEGYlrFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFW--FTRPI 170
Cdd:PRK06473 81 -SLPLLVLNSLLTLIAIYSSDESIQRPRF--YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWggQRRGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 171 AASacqKAFVTNRVGDFGLLLGILGFFWITGSLEFrDLFKIANNWIPnneINSLLTILCAFLLFLGAvaKSAQFPLHVWL 250
Cdd:PRK06473 158 AAT---KFLLYTAISGILILVSFLGLVWLSGASSF-DYEPLRSHTLP---LSTQLLLLAPILVGFGI--KIPLVPFHTWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 251 PDA-MEGPTPISALIhAATMVAAGIFLIARL-LPLFI-SLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQL 327
Cdd:PRK06473 229 PDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgVGLFPeAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 328 GYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVihsmeplvgYSPDKSQNMVLMGGL---RKYIPITRTCFLWG 401
Cdd:PRK06473 308 GYILLAAAAAtplSILAAVFQMISHGLISALLFLLVGVV---------YKKTGSRDVDVLRGLlnpERGLPITGSLMILG 378
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 378758457 402 TLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFY 445
Cdd:PRK06473 379 VMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVY 422
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
67-454 |
3.50e-18 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 88.14 E-value: 3.50e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 67 SIYQYLWSWTVNNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFvyISFFNTSMLG---LVTSSN 143
Cdd:CHL00049 55 SITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEF--LLFVLTATLGgmfLCGAND 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 144 LIQIYFFWELVGMCSYLLIGFwftrpiaasaCQKAFVTNRVGDFGLLLG-----IL--GFFWITG-SLEFRDLFKIANNW 215
Cdd:CHL00049 133 LITIFVALECLSLCSYLLSGY----------TKKDVRSNEATMKYLLMGgasssILvyGFSWLYGlSGGEIELQEIVNGL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 216 IPNNEINSLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLIARLL--PLFISLPLIMS 292
Cdd:CHL00049 203 INTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRIFdiPFYFSSNEWHL 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 293 FISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEPLVG 372
Cdd:CHL00049 282 LLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTG 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 373 yspdkSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSW---LYSPFFgiIASFTAGLTAFYMFRI 449
Cdd:CHL00049 362 -----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWqagLYFLVS--IGLLTSVISIYYYLKI 434
|
....*
gi 378758457 450 YLLTF 454
Cdd:CHL00049 435 IKLLM 439
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
69-417 |
4.26e-18 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 87.78 E-value: 4.26e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 69 YQYLWSWTVNNDFSLEFGYLIDPLTSIMLILITTVGILVLIysdDYMSHDEGYlRFFVYISFFNT-SMLGLVTSSNLIQI 147
Cdd:PRK06277 50 YYYFGGHGLVNGYHSGITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSS-GLYVFLMLMGLaSVSAIVLADDIFNL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 148 YFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFgLLLGILGFFWITGSLEFRDLfkiaNNWIPNNEINSLLtI 227
Cdd:PRK06277 126 YVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSI-LLLGIGFLLASTGTLNITDI----HNALLVNPTSPVI-Y 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 228 LCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIfLIARLLPLFISLPLIMSFISLIGTLTLF 303
Cdd:PRK06277 200 GGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPfGSALLQTfskFVLVALML-VIFKLFGGLSYFPSAQGVLIALSVLAMV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 304 LGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSVihsmeplvgYSPDKSQN 380
Cdd:PRK06277 279 FGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSN 349
|
330 340 350
....*....|....*....|....*....|....*..
gi 378758457 381 MVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSK 417
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSK 386
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
89-459 |
1.54e-17 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 86.80 E-value: 1.54e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 89 IDPLTSIMLILITTVGILVLIYSDDYMSHDE----GYLrffvyISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGf 164
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLFNIDWHRHAQvkanGLL-----INLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTG- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 165 wftrpiAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNEInsLLTILCAFLLFLGAVaksaqf 244
Cdd:PRK08042 132 ------NSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDI--WLLGVIGFGLLAGII------ 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLI-GTLTLFLGATLALAQRDIKRSLAYST 323
Cdd:PRK08042 198 PLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVlGMITAFVGGLYALMEHNIQRLLAYHT 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 324 MSQLGYMMLALGIG--------------SYQAALFHLITHAYSKALLFLGSGSVIHSmeplVGYspdksQNMVLMGGLRK 389
Cdd:PRK08042 278 LENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RDIEKLGGIGK 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 390 YIPITRTCFLWGTLSLCGIPPLACFWSKDEI------LSNSWLY-----SPFFGIIASFTAGLTAFYMFRIYLLTFDGYL 458
Cdd:PRK08042 349 KMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFvarllGPLLAVGLAITGALAVMCMAKVYGVTFLGAP 428
|
.
gi 378758457 459 R 459
Cdd:PRK08042 429 R 429
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
134-449 |
2.29e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 81.62 E-value: 2.29e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 134 SMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIAN 213
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 214 NWIPNNEINSLLT--ILCAFLLFLGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLIarllplFISLPLI 290
Cdd:MTH00196 85 SGQSFSSVSVPIGylLIIVALLFKLSVA-----PFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSI------LVSIGLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 291 MSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSY---QAALFHLITHAYSKALLFLgsgsvihsm 367
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVFS--------- 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 368 ePLVGYSPDKSQnMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSWLYSPFF-GIIASFTAGLTAFYM 446
Cdd:MTH00196 223 -IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLiFLLAVFCSVIAGVYY 300
|
...
gi 378758457 447 FRI 449
Cdd:MTH00196 301 VRI 303
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
226-454 |
4.96e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 81.55 E-value: 4.96e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 226 TILCAFLLFLGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFL 304
Cdd:PRK12665 209 TALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVV 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 305 GATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFLGSGSVihsmEPLVGyspdkSQNM 381
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSL 357
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 378758457 382 VLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEIL-----SNSWLysPFFGIIAS-FTAGLTAFYMFRIYLLTF 454
Cdd:PRK12665 358 RRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWL--AWALVAGGvVTSLLTLYAVARVWTKAF 434
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
136-453 |
5.87e-15 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 78.15 E-value: 5.87e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 136 LGLVTSSNLIQIYFFWELVGMCSYLLIGFW--FTRPIAASacqKAFVTNRVGDFGLLLGILGFFWITGSLEFrDLFKIAN 213
Cdd:PRK12561 101 IGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASIFILVAGLALALSGDTFTF-DLAELGA 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 214 NWIPNNeinslLTILCAFLLFLGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMS 292
Cdd:PRK12561 177 KSYPLA-----LELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFA 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 293 FISLI-GTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMlaLGIGSYQA-----ALFHLITHAYSKALLFLGSGsvihs 366
Cdd:PRK12561 252 PALAIlGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQMISHGLIAAALFFLTG----- 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 367 meplVGYSPDKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEI---LSNSWLYSPFFGIIASFTAG--- 440
Cdd:PRK12561 325 ----VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITSSDVYSSTFRTITILLAAvgl 400
|
330
....*....|....
gi 378758457 441 -LTAfymfrIYLLT 453
Cdd:PRK12561 401 iLTP-----IYLLS 409
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
75-125 |
1.34e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 68.22 E-value: 1.34e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 378758457 75 WTVNNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFF 125
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
44-503 |
2.77e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 75.82 E-value: 2.77e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 44 SVLLLSIAMVFSVHLsIQQINGSSIYQYLWSWTVNNDFSLEFGYLIdplTSIMLILITTVGILVLIYSDDYMShdEGYLR 123
Cdd:MTH00199 25 STLKLSIGVLLLIGL-IVELNSLNLFQSDKVLDGTNGLLLTNSWII---ISKIIIIIGSISILLMGSGETILS--EGGQS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 124 FFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSL 203
Cdd:MTH00199 99 SPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGET 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 204 EFRdlfkiANNWIPNNEINSLLtILCAFLLFLGAVaksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLIARLLP 282
Cdd:MTH00199 179 SIQ-----GINSILTGDVGKIL-ITISLLFKLSAA------PFHMWAPDVYEGaPTITTALL--ATVPKIGVFSILVQIG 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 283 LFISLPLIMSFISLIgtltlfLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSY---QAALFHLITHayskALLFLG 359
Cdd:MTH00199 245 PVTNVVLICAVLSII------YGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiQASLIYMIIY----VIMSIC 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 360 SGSVIHSMEPLVGYspdksqnMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEIL----SNSWLYSPFFGIIA 435
Cdd:MTH00199 315 SFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILlsgvSSGYYLICIIAVLS 387
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 378758457 436 SFTAGLtaFYMFRIYLLTFdgylrvhfqnysstkeDSLYSISLWGKRIskgvNRDFVLSTAKS---GVSFF 503
Cdd:MTH00199 388 SVIAGV--YYVRVVQIIYF----------------QADYSILIWQKVL----KKEERLDLSKSiliGVTFF 436
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
65-417 |
1.48e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 70.47 E-value: 1.48e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 65 GSSIYQYLWSWTVNNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFfnTSMLG---LVTS 141
Cdd:PRK02504 52 GAALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYVEQSGTPLGEFAAILL--TATLGgmfLSGA 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 142 SNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEfrDLFKIANNWIPNNei 221
Cdd:PRK02504 130 TELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGST--QLSAIALALITSP-- 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 222 nSLLTILcAFLLFLGAVA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLIARLLPL-FISLPLIMSFI-SLI 297
Cdd:PRK02504 206 -SLGLAL-ALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLVTaFPSFDEQWKLLfTAL 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 298 GTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITH------AYSKALLF-LGSGSvihsm 367
Cdd:PRK02504 283 AILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYlfmnlgAFACVILFsLRTGT----- 357
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 378758457 368 EPLVGYSpdksqnmvlmgGLRKYIPITRTCFLWGTLSLCGIPPLACFWSK 417
Cdd:PRK02504 358 DQISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
136-506 |
7.85e-11 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 64.97 E-value: 7.85e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 136 LGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTnRVGDFGLLLGILGF-FWITG--SLEFRDLfkiA 212
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLGMgLYGSNepTLNFETL---A 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 213 NNWIPNNeinslLTILCAFLLFLGAVAKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFL------IAR----LL 281
Cdd:CHL00011 202 NQSYPVA-----LEILFYIGFLIAYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRinmeLL 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 282 PLFISLplIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMlaLGIGSY-----QAALFHLITHAYSKALL 356
Cdd:CHL00011 270 PHAHSI--FSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGAAL 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 357 FlgsgsvihsmePLVGYSPDKSQNMVL--MGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEI---LSNSWLYSPFF 431
Cdd:CHL00011 346 F-----------FLAGTSYDRIRLVYLdeMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVffgIITSQKYLLMP 414
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 432 GIIASFTAG----LTAFYMFRIYLLTFDGYLRVHFQNYS---STKEDSLYSISLWGKRISKGVNRDFVLSTAKSGVSFFS 504
Cdd:CHL00011 415 KILITFVMAigmiLTPIYLLSMLRQMFYGYKLFNVPNSYffdSGPRELFISICILLPVIGIGIYPDFVLSLSVDKVEAIL 494
|
..
gi 378758457 505 QN 506
Cdd:CHL00011 495 SN 496
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
148-453 |
1.75e-10 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 63.96 E-value: 1.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 148 YFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGI-LGFFWITGSLEFRDLfkiANNWIPNNeinslLT 226
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALaMAFYGDTPTFDMTAL---AAKDFGLG-----FQ 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 227 ILCAFLLFLGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAATMVAAGIFLI---ARLLP----LFISLPLIMSFISLI- 297
Cdd:PRK02546 213 LLCYAGLLIAYGVKLPIVPLHTWLPDAHgEATAPVHMLLAGILLKMGGYALLrmnAGMLPdahaQFAPLLIVLGVVNIIy 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 298 GTLTLFlgatlalAQRDIKRSLAYSTMSQLGYMMlaLGIGSYQA-----ALFHLITHAYSKALLFLgsgsvihsmepLVG 372
Cdd:PRK02546 293 AALTSF-------AQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF-----------LVG 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 373 YSPDKSQNMVL--MGGLRKYIPITRTcfLWGTLSLC--GIPPLACFWSKDEI---LSNSWLYSPFFGIIASFTAGLTAFy 445
Cdd:PRK02546 353 ATYDRTHTLMLdeMGGVGQKMRKMFA--MWTACSLAslALPGMSGFVAELMVfvgFATSDAYTLPFRVVVVFLAAVGVI- 429
|
....*...
gi 378758457 446 MFRIYLLT 453
Cdd:PRK02546 430 LTPIYLLS 437
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
199-422 |
2.68e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 63.33 E-value: 2.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 199 ITGSLEFRDL-FKIAnnWIPNNEInSLLTILCAFLL--FLgavAKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGI 274
Cdd:PRK12666 185 VTGTLNMADLaQRIA--QLPAADR-ALLEAGAALLLvvFL---IKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGI 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 275 FLIARLLPLF------ISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQ---AALFH 345
Cdd:PRK12666 257 YAILRLSTLLfgpeagASAGFGQDWLLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYY 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 346 LITHAYSKALLFL----------GSGSVIHSMEPLvgYSPDKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFW 415
Cdd:PRK12666 337 LVHSTLAAAALFLladlverqrgAAADRLAVTPEL--YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFL 414
|
....*..
gi 378758457 416 SKDEILS 422
Cdd:PRK12666 415 GKFALLQ 421
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
94-363 |
7.90e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 62.12 E-value: 7.90e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 94 SIMLILITTVGILVLIYSDDYmSHDEGYLRffvyiSFFNTSMLGLV---TSSNLIQIYFFWELVGMCSYLLIGfwftrpI 170
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS-----SLYILTILGMAivlTSDNYLLFLAGWEIMTIPSYVAIA------L 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 171 AASACQKAFVTNRVGDFGLLLGILGFFW---ITGSLEFrdlfkiannwipnneiNSLLTILCAFLLFLGAVAKSAQFPLH 247
Cdd:PRK06459 115 TKKNKRPAFVFMAFGELSTVLILAGFAWafiISGTTNF----------------SYLPSPVPLILASFGFIIKMGMMPFL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 248 V--WLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPL--IMSFISLIGTLTLFLGATLALAQRDIKRSLAYST 323
Cdd:PRK06459 179 VseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAFST 258
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 378758457 324 MSQLGYMMLALG--IGSYQ-----------AALFHLITHAYSKALLFLGSGSV 363
Cdd:PRK06459 259 IENNGAILVALGlyMVTKQlitsiehfsliTVILYSFAHSVAKTGLFLSSGLQ 311
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
143-447 |
2.34e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 60.32 E-value: 2.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 143 NLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLfkIANNWIPNNEIN 222
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTL--ASCSHVVSEQTQ 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 223 SLLtilcaFL-LFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLIARLLPLfisLPL----IMSFISL 296
Cdd:MTH00226 230 KWI-----FLgIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPI---LPLgaqnLAPAVIA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 297 IGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLAL---GIGSYQAALFHLITHAYSKALLFLgsgsvihsmepLVGY 373
Cdd:MTH00226 302 MGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI-----------LVTI 370
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 378758457 374 SPDKSQNMVL--MGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMF 447
Cdd:MTH00226 371 LYDRHHTRLIkyYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
46-456 |
8.86e-09 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 58.60 E-value: 8.86e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 46 LLLSIAMVFSVHLSIQQINGSSIYQYLWSWTVNNDFSLEFGYL-IDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRF 124
Cdd:MTH00014 13 LLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLsSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 125 FVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLE 204
Cdd:MTH00014 93 MTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLS 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 205 FRDLFKIANNWIPNNeinslltiLCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------I 277
Cdd:MTH00014 173 MLMSSMEPPSIYLMN--------LWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 278 ARLLPLFISLPLIMS-FISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYM---MLALGIGSYQAALFHLITHAYSK 353
Cdd:MTH00014 238 LRMSSLFMHINKSLSaPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMtagIMSNTSWGWQGALAMMIAHGLCS 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 354 ALLFlgsgsVIHSMEplvgYSPDKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGI 433
Cdd:MTH00014 318 SALF-----ALANMT----YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAI 388
|
410 420
....*....|....*....|...
gi 378758457 434 IASFTAGLTAFYMFRIYLLTFDG 456
Cdd:MTH00014 389 LLAITSFLAAAYSLFLYTSTQHG 411
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
240-449 |
1.84e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 57.56 E-value: 1.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 240 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLIArllpLFISLPLIMSfislIGTLTLFLGATLALAQRDIKRS 318
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTS----LVITSKLLLS----VAIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 319 LAYSTMSQLGYMMLALGIGSYQaALFHLITHAYSKALLFLGSGSVIHSMEPLVGYSPDKSQNmvlMGGLRKYIPITR--- 395
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQR---DGSFGNYNLVRRlvd 459
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 378758457 396 -TCFLWGT-----------LSLCGIPPLACFWSKDEILSNS-----------WLYSPFFGIIASFtagLTAFYMFRI 449
Cdd:MTH00198 460 lTILSRGQpyiafslaivfLSLAGIPPLLGFLGKWFILVGSikiafssslsiYYLVALFAIICTC---ISAFYYIRI 533
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
26-466 |
1.85e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 57.26 E-value: 1.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 26 LFLVPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSwtvnndfslefgylIDPLTSIMLILITTVGI 105
Cdd:MTH00206 8 MLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLS--------------YDPLSSPLVILSCWLLP 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 106 LVLIYSDDYMsHDEGYLRFFVYISFFNTSMLGLV---TSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTN 182
Cdd:MTH00206 74 LMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 183 RVGDFGLLLGILgffWITGSLEFRDLFkiannWIPNNEINSLLTILCAFLLFLGAVAKSAQFPLHVWLPDA-MEGPTpis 261
Cdd:MTH00206 153 LIGSLPLLIALL---FLQNSLGSLSLY-----ILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVEAPV--- 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 262 alihAATMVAAGIFL------IARLLPLFI-SLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLAL 334
Cdd:MTH00206 222 ----AGSMVLAGVLLklggygMMRIILILGpSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGI 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 335 GIGS---YQAALFHLITHAY-SKALLFLGSgsvihsmeplVGYSPDKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPP 410
Cdd:MTH00206 298 LSGSpwgFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPP 367
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 378758457 411 LACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYS 466
Cdd:MTH00206 368 FPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-332 |
1.91e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 57.10 E-value: 1.91e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 87 YLIDPLTSIMLILITTVGILVLIYSDD--------YMSHDEGYLrFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCS 158
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 159 YLLIGFWfTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFkianNWIPNNEINSLLTILCAFLLfLGAV 238
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIA----AYLQEHTNSRIITIAIGFFL-IGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLP----LIMSFISLIGTLTLFLGATLALAQRD 314
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYEtiktAITNFIRPIALATLIIAPYFAYQAKN 305
|
250
....*....|....*...
gi 378758457 315 IKRSLAYSTMSQLGYMML 332
Cdd:PRK06591 306 FKNIIIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
89-478 |
2.67e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 56.89 E-value: 2.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 89 IDPLTSIMLILITTVGILVLIYSDDYMSHdEGYLRFFVYISFFNTSMLGLV---TSSNLIQIYFFWELVGMCSYLLIGFW 165
Cdd:MTH00127 59 TDPLSTPLLVLTCWLLPLMILASQNHTAP-EPINRQRMYITLLTSLQIFLIlafGATEIIMFYVMFEATLIPTLIIITRW 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 166 FTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLfKIANNWIPNNEINSLLTILC--AFLLflgavaKSAQ 243
Cdd:MTH00127 138 GNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTL-QYSQPLQLSSWADKLWWAGCllAFLV------KMPL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTL-TLFLGATLALAQRDIKRSLAYS 322
Cdd:MTH00127 211 YGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALwGIIMTGSICLRQTDLKSLIAYS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 323 TMSQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSvihsmeplvGYSPDKSQNMVLMGGLRKYIPITRTCFL 399
Cdd:MTH00127 291 SVSHMGLVAGGILIQtpwGFTGALILMIAHGLTSSALFCLANT---------NYERTHSRTMLLARGLQMILPLMATWWF 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 400 WGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNY--SSTKEDSLYSIS 477
Cdd:MTH00127 362 IASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALnpSHTREHLLMALH 441
|
.
gi 378758457 478 L 478
Cdd:MTH00127 442 L 442
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
135-466 |
4.42e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 56.21 E-value: 4.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 135 MLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFkiann 214
Cdd:MTH00217 122 LMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----- 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 215 wipNNEINSLLTILCAFLLFLGAVAKSAQFPLHVWLPDAmegptpisaliHAATMVAAGIFLIARLLPL----FI--SLP 288
Cdd:MTH00217 197 ---CLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQA-----------HVEAPVAGSVILAGVLLKLggygFIrfSWP 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 289 LIMS----FISLIGTLTLF---LGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQ---AALFHLITHAYSKALLFL 358
Cdd:MTH00217 263 LLPEaseyFSPLIQTLSLLaiiYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQglvAAIFLMLAHGLVSSALFI 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 359 GSGSVIHSMEP-LVGYSPDKSQNMVLMGGLrkyipitrtcFLWGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASF 437
Cdd:MTH00217 343 AVTFLYERHHTrLIKYYRGMVITMPLFGIL----------MLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASL 412
|
330 340
....*....|....*....|....*....
gi 378758457 438 TAGLTAFYmfRIYLltfdgYLRVHFQNYS 466
Cdd:MTH00217 413 GMVLSAGY--SIYL-----YNRVCFGAPS 434
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
88-461 |
4.84e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 56.08 E-value: 4.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 88 LIDPLTSIMLILITTVGILVLIYSDDYMShDEGYLRFFVYIS---FFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGF 164
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHLK-NEPINRQRTYISmliILQLTLILAFSATELILFYIFFEATLIPTLIIITR 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 165 WF--TRPIAASAcQKAFVTnRVGDFGLLLGILGFFWITGSLEFrDLFKIANNWIPNNEINSLLTILC--AFLLflgavaK 240
Cdd:MTH00068 136 WGnqEERLNAGT-YFLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLACllAFMV------K 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 241 SAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------IARLLPLF--ISLPLIMSFI--SLIGTLtlfLGATLA 309
Cdd:MTH00068 207 MPLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygILRISILLtpLSKELSYPFIilALWGVL---MTSLIC 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 310 LAQRDIKRSLAYSTMSQLGYMMLALGIG---SYQAALFHLITHAY-SKALLFLGSGSvihsmeplvgYSPDKSQNMVLMG 385
Cdd:MTH00068 277 LRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCLANTN----------YERTHSRTLLLLR 346
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 378758457 386 GLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVH 461
Cdd:MTH00068 347 GAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNH 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
74-359 |
8.52e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 55.45 E-value: 8.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 74 SWTVNNDFSLEFGYLIDPLTSIML------ILITTVGILVLIYSDDYMshdegYLRFFVYISFFNTSMLGLVTSSNLIQI 147
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVSLffilltTLLIPICILISWKSIKFL-----FKEFLLCLLFLEVLLIGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 148 YFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIAnnwIPnneINSLLTI 227
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIK---LP---LSIQKWL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 228 LCAFllFLGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMS-FISLIGTLTLFLG 305
Cdd:MTH00204 212 LVGF--FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFApLIVMLSVIAVIYG 289
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 378758457 306 ATLALAQRDIKRSLAYSTMSQLGYMMLAL---GIGSYQAALFHLITHAYSKALLFLG 359
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIA 346
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
69-447 |
2.14e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 54.07 E-value: 2.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 69 YQYLWSWTVNNDFslefgYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIY 148
Cdd:MTH00150 7 YSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFY 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 149 FFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFrdlfKIANNWIPNNEINSLLTIL 228
Cdd:MTH00150 82 FFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM----LLISSLRKLLSSMGLWGLL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 229 CaFLLFLgavAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------IARLLPLFISLPliMSFISLIGTLT 301
Cdd:MTH00150 158 V-FLAFL---VKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSS--SSFSIFLISLS 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 302 L---FLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAYSKALLFLgsgsvihsmepLVGYSP 375
Cdd:MTH00150 225 LwggVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLFC-----------LANYTY 293
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 378758457 376 DKSQ--NMVLMGGLRKYIPItrTCFLWGTLSLC--GIPPLACFWSKDEILSNSWLYSPFFGII---ASFTAGLTAFYMF 447
Cdd:MTH00150 294 EKVHsrSLFLSKGMLMLYPS--LSLWWFLFCIInmAAPPSLNLLSEIMIFPSLISYSPWFFVPlglMVFLSGLYSLYLY 370
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
215-467 |
5.23e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 52.20 E-value: 5.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 215 WIPNNEINSLLTILCAFLLFLGAvaksaqFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLiarlLPLFISLPLIMSFI 294
Cdd:MTH00144 78 YNLSFSWFSMSLLLLGLCLKLGL------FPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFL----LSNFLDLYWLAYLL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 295 SLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEPLVGYS 374
Cdd:MTH00144 148 CVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLK 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 375 PDKSQNMVLMGGLrkyipitrtcflwgtLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTA--FYMFRIYLL 452
Cdd:MTH00144 228 PSYKTGLSIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSS 292
|
250
....*....|....*
gi 378758457 453 TFDGYLRVHFQNYSS 467
Cdd:MTH00144 293 FLSSSKSKKSNSSKV 307
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
221-486 |
1.53e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 50.74 E-value: 1.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 221 INSLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLfislpLIMSFISLIGTL 300
Cdd:MTH00200 86 ISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA-----LNSNILLLLGLL 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 301 TLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLgsgsvihsmeplvgYSPDKSQN 380
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL--------------LNLLNSTK 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 381 MVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMfriylltfdgYLRV 460
Cdd:MTH00200 227 INSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFF----------YLRL 296
|
250 260
....*....|....*....|....*.
gi 378758457 461 HFQNYSSTKEDSLYSISLWGKRISKG 486
Cdd:MTH00200 297 SYLTLLTLSPNQINMMSSWRTKSNSN 322
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
124-449 |
6.05e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 45.69 E-value: 6.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 124 FFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFT-RPIAASAcqKAFVTNRVGDFGLLLGILGFFWITGS 202
Cdd:MTH00041 6 LIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSpRSVEATI--KYFLVQAFSAAILLNGALIQAWLSGS 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 203 lefrdlfkiannWIPNNEINSLLTILCAFLLFLgavaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIarllp 282
Cdd:MTH00041 84 ------------WSINGPLNTLSSIIITLALAL----KLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILL----- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 283 LFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGS 362
Cdd:MTH00041 143 ISISNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNF 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 363 VIHSMEPLvgyspdksqnmvlmGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSK-----DEILSNSWLYSPFFgIIASF 437
Cdd:MTH00041 223 SLSTLSHL--------------NKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIIL-IIGSL 287
|
330
....*....|..
gi 378758457 438 tagLTAFYMFRI 449
Cdd:MTH00041 288 ---LSLFFYLRI 296
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
223-414 |
2.75e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 43.66 E-value: 2.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 223 SLLTILCAFLLFLGAVaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGIFLiarllpLFISLPLI-MSFISLIGTLT 301
Cdd:MTH00112 94 SCTLLTLALAMKLGLA------PFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILS 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 302 LFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIgSYQAALFHLITHAYSKALLFLgsgsVIHSMeplvgyspdKSQNM 381
Cdd:MTH00112 162 TLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTT---------STKTL 227
|
170 180 190
....*....|....*....|....*....|...
gi 378758457 382 VLMGGLRKYIPITRTCFLWGTLSLCGIPPLACF 414
Cdd:MTH00112 228 KDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGF 260
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
78-410 |
6.29e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 42.96 E-value: 6.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 78 NNDFSLEFgyLIDPLTSIMLILITTVGILVLIYSDDYMSHdEGYLRFFVYISFFNTSMLGLV---TSSNLIQIYFFWELV 154
Cdd:MTH00110 49 SLNFSLLF--FSDSLSTPLLILTTWLLPLMLMASQHHLSK-EPLTRKKLYITMLILLQLFLImtfTATELIMFYILFEAT 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 155 GMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRdLFKIANNWIPNNEINSLLTILC--AFL 232
Cdd:MTH00110 126 LIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFL-LLQLWAQPLPNSWSNNLLWLACmmAFM 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 233 LflgavaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------IARLLPL------FISLPLIMsfISLIGT 299
Cdd:MTH00110 205 V------KMPLYGLHLWLPKAhVEAPI-------AGSMVLAAILLklggygMMRITIIlnplteFMAYPFLM--LSLWGM 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 300 LtlfLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIG---SYQAALFHLITHAYSKALLFLGSGSvihsmeplvGYSPD 376
Cdd:MTH00110 270 I---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMIAHGLTSSMLFCLANS---------NYERI 337
|
330 340 350
....*....|....*....|....*....|....
gi 378758457 377 KSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPP 410
Cdd:MTH00110 338 HSRTMILARGLQTLLPLMATWWLLASLTNLALPP 371
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
82-387 |
1.33e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 41.89 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 82 SLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLL 161
Cdd:MTH00205 48 FISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLIL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 162 IGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNwipnneiNSLLTILCAFLLfLGAVAKS 241
Cdd:MTH00205 128 ILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFS-------DFYLFLYWIFLM-LAFLVKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 242 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------IARLLPLFISL-----PLIMSfISLIGTltlFLGATLA 309
Cdd:MTH00205 200 PMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRITSMLYKLnsnfsELFFS-ISLWGG---VMTGMIC 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 310 LAQRDIKRSLAYSTMSQLGYMMLALGIGS---YQAALFHLITHAY-SKALLFLGSgsvihsmeplVGYSPDKSQNMVLMG 385
Cdd:MTH00205 269 LRQVDLKSLIAYSSVGHMGLMVVGVFSNTswgMNGAIIMMVAHGLcSSGMFALAN----------VNYERTNSRSMLMNK 338
|
..
gi 378758457 386 GL 387
Cdd:MTH00205 339 GV 340
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
218-347 |
1.80e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 41.35 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 218 NNEINSLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLIARLLPLF-ISLPLIMSFISL 296
Cdd:MTH00160 78 NMLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFI---------LMTWQKIAPLIlLSYLINNNFIII 148
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 378758457 297 IGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLI 347
Cdd:MTH00160 149 IIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLI 199
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
222-423 |
2.11e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 41.25 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 222 NSLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAA--TMVAAGIFLiarllpLFISLPLIMSFIsliGT 299
Cdd:PRK12664 139 NGQYTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLftTKVAALVLL------LFFSGEEILLFL---GI 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 300 LTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGS-----YQAALFHLITHAYSKALLFLGSGSVIHSmeplvgys 374
Cdd:PRK12664 210 ITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINR-------- 281
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 378758457 375 pDKSQNMVLMGGLRKyIPITRTCFLWGTLSLCGIPPLACFWSKDEILSN 423
Cdd:PRK12664 282 -TRKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHS 328
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
222-454 |
2.72e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 40.43 E-value: 2.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 222 NSLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLIARLLPLFISLPLIMSFISLI--GT 299
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILAFNSSSFMGLLicSV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 300 LTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEPLVGYSPDKSQ 379
Cdd:MTH00197 145 LSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSS 224
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 378758457 380 NMVLmgglrkyipitrtcFLWGTLSLCGIPPLACFWSKDEILSN-SWLYSPFFGIIASFTAGLTAFYMFRIYLLTF 454
Cdd:MTH00197 225 NLVF--------------LGLSFLSLGGLPPLSGFFLKWLILTSlLSSNISLITFMLILSTCFSLYYYLSLAYKSL 286
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
223-417 |
3.12e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 40.53 E-value: 3.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 223 SLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVaagiflIARLLPLFISLPL-IMSFISLIGTLT 301
Cdd:MTH00011 84 SLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQK------IAPLSILFFFTSHnILPMMTSMAAMS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 302 LFLGATLALAQRDIKRSLAYSTMSQLGYMMLALgIGSYQAALFHLITHAYSKALLFLgsgsvihsmepLVGYSPDKSQNM 381
Cdd:MTH00011 158 ALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYIIITTPLML-----------LFAYLNAFSTKF 225
|
170 180 190
....*....|....*....|....*....|....*.
gi 378758457 382 vlMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSK 417
Cdd:MTH00011 226 --NSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPK 259
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
220-421 |
4.64e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 39.90 E-value: 4.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 220 EINSLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLIARLLPLfISLPLIMsfisLIGT 299
Cdd:MTH00070 85 TIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHL-LNSNLLI----IMGL 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 300 LTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIgSYQAALFHLITHAYSKALLFLgsgSVIHSMeplvgyspdkSQ 379
Cdd:MTH00070 160 LSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL---MLMNLN----------ST 225
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 378758457 380 NMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00070 226 NINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLIL 267
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
40-470 |
7.50e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 39.57 E-value: 7.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 40 WAFPSVLLLSIAMVFSVHLSIQQINgssIYQYLWSWTVNNdfsLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDE 119
Cdd:MTH00044 16 WIVPKNKLWPISISQSSLISLLSLF---LLNNHWSSSWHN---LSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 120 GYLR--FFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFF 197
Cdd:MTH00044 90 PNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 198 WITGSLEFrDLFKIANNWIPNNEINSLLTILCaFLLFLgavAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIFL 276
Cdd:MTH00044 170 SSSSSLSI-PLSELNWLTSLSSNSSSIWWIFC-ILAFL---VKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGYG 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 277 IARLLPLF-------ISLPLImSFISLIGTLTlflgATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSY---QAALFHL 346
Cdd:MTH00044 244 LIRLINLFslpsannISFILI-VFCCWGALIT----SIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNwgiNGALILM 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 378758457 347 ITHAY-SKALLFLGSgsvihsmeplVGYSPDKSQNMVLMGGLRKYIPITRtcfLWGTLSLC---GIPPLACFWSKDEILS 422
Cdd:MTH00044 319 IAHGLvSSALFCLAN----------ILYERSGTRTLSITRGFKLITPLLP---LWWLIFCAanlGLPPLPNLIGELLIIS 385
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 378758457 423 NSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYSSTKE 470
Cdd:MTH00044 386 SIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISS 433
|
|
| |
