|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.21e-148 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 422.31 E-value: 1.21e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 81 TGQWDITQLTYPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTTMSIM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 37780961 321 TNTPISVLTSLSISLLPLSPMIFTIT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-323 |
7.49e-124 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 359.50 E-value: 7.49e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 81 TGQWDITQLTYPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSlNPTLLTTMSIM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
...
gi 37780961 321 TNT 323
Cdd:MTH00135 320 QLT 322
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
5.54e-123 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 357.31 E-value: 5.54e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 81 TGQWDITQLTYPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTTMSIM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 37780961 321 TNTPISVLTSLSISLLPLSPMIFTI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
1.95e-106 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 315.25 E-value: 1.95e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 81 TGQWDITQLTYPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTTMSIM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITL-PPNPSSKMKqWSTKN 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMfPSTNNMKMK-WQFEN 319
|
....*.
gi 37780961 320 PTNTPI 325
Cdd:MTH00105 320 TKPMTL 325
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.00e-92 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 279.16 E-value: 3.00e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 81 TGQWDITQLTYPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTTMSIM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 37780961 321 TNTPISVLTSLSISLLPLSPMIFTIT 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
7-322 |
9.37e-86 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 262.56 E-value: 9.37e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 7 LILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDI 86
Cdd:MTH00041 7 IFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 87 TQLTYPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTTMSIMSITLGG 166
Cdd:MTH00041 87 NGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 167 WMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPMLNTTLML 246
Cdd:MTH00041 167 WGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFIL 246
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 37780961 247 TLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNPTN 322
Cdd:MTH00041 247 SILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNIT 322
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
2.97e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 193.89 E-value: 2.97e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 81 tgqwdITQLTYPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLlitSHSLNPTLLTTMSIM 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITlppnpSSKMKQWSTKNP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLML-----NYNKNKWNLKKK 307
|
330 340
....*....|....*....|....*
gi 37780961 321 TNTPISVLTSLSISLLPLSPMIFTI 345
Cdd:MTH00160 308 KNKFSLILNFLSFISLFGLILSSLL 332
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-325 |
2.20e-50 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 170.84 E-value: 2.20e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 13 ILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDITqltyp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 93 pacLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPttLLLITSHSLNPTLLTT---MSIMSITLGGWMG 169
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAP--LFLLSNFLDLYWLAYLlcvISVLSALVGSIGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 170 LNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTlMTSWTKTPMLNTTLMLTLL 249
Cdd:MTH00144 163 LNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYKTGLSIISLLL 241
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 37780961 250 SLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITlppnpSSKMKQWSTKNPTNTPI 325
Cdd:MTH00144 242 SLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLS-----SSKSKKSNSSKVLNSSI 312
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-325 |
3.91e-46 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 159.56 E-value: 3.91e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 1 MTPTAKLILTlSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTInawh 80
Cdd:MTH00011 4 TFPTMFLFSS-TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 81 tgQWDITQLTYPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTTMSIM 160
Cdd:MTH00011 79 --MWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 161 SITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPML 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSLKSAPYEPKTK 316
|
....*
gi 37780961 321 TNTPI 325
Cdd:MTH00011 317 ILISM 321
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-313 |
1.01e-42 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 150.59 E-value: 1.01e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTgqwdit 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 88 qLTYPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPttLLLITSHSLNPTLLTTMSIMSITLGGW 167
Cdd:MTH00197 76 -YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 168 MGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTLMTASIFLTMNTTNISKLSTLMTSWTKTPMLNTTLMLT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 37780961 248 LLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYCSTITLPPNPSSKMK 313
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMK 298
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-298 |
1.65e-32 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 126.00 E-value: 1.65e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLF--------SSTIN- 77
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygaTGSLNl 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 78 ---AWHTGQWDITQLTYPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKL----PPTTLLLITSHSLN 150
Cdd:COG1007 186 agiAAALAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLA 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 151 P---TLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMI-IITYNPK-LTLLTFY--TYTLMTASIFLTM---- 219
Cdd:COG1007 266 AdwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYllAYLFMNLGAFAVIllls 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 220 ----NTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLR 295
Cdd:COG1007 346 rkggEAEEIEDLAGL---ARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLR 422
|
...
gi 37780961 296 LAY 298
Cdd:COG1007 423 VVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
8-296 |
1.55e-27 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 112.22 E-value: 1.55e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDI 86
Cdd:PRK05777 107 LLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSF 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 87 TQL--------TYPP----ACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKL----PPTTLLLITSHSLN 150
Cdd:PRK05777 187 AGIakaladgsGNSLlllfGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLS 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 151 PT---LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMI---IITYNPKLTLLtFY--TYTLMTASIF--LTM- 219
Cdd:PRK05777 267 EDwqqVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVglaAGTAEGYSAVL-FYllAYLFMTLGAFgvISLl 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 220 -----NTTNISKLSTLmtSWTKtPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYL 294
Cdd:PRK05777 346 rrkggEAESISDFAGL--SKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYL 422
|
..
gi 37780961 295 RL 296
Cdd:PRK05777 423 RV 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.57e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 110.89 E-value: 1.57e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 13 ILLGTTITITSNHWTTAWAGLEINTLSIIPMI-SKSHHPRAIEAATKYFLVQAAASTLMLFS-------------STINA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 79 WHTGQWDITQLTYPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLppTTLLLITSHSLNPTLLTTMS 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKL--GIFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 159 IMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNP----KLTLLTFYTYTLMTASIF--LTMNTTNISKLSTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFsiILALNVYKNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 37780961 233 SWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
2.82e-25 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 103.16 E-value: 2.82e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 23 SNHWTTAWAGLEINTLSIIPMI-SKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDITQL-TYPPAC----- 95
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELsKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 96 -----LLLTTAIATKLGLAPLHFWFPEVLQGSSLT-TALLLSTIMKLPPttLLLITSHSLNPT-------LLTTMSIMSI 162
Cdd:pfam00361 81 llllfLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGG--YGLIRRSLLYLPsspfiqqILLILAIISM 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 163 TLGGWMGLNQTQTRKIMAFSSISHLGWMMIII----TYNPKLTLLTFYTYTLMTASIFL--------TMNTTNISKLSTL 230
Cdd:pfam00361 159 LLGSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsviyrRVHTRNIRDYGGL 238
|
250 260 270
....*....|....*....|....*....|....*...
gi 37780961 231 mtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 239 ---AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
8-297 |
5.15e-22 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 96.56 E-value: 5.15e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSI-IPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDI 86
Cdd:TIGR01770 106 ILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNF 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 87 TQL-----TYPP-------ACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLL-------ITSH 147
Cdd:TIGR01770 186 EDLllflsNGMLnisllllGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFS 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 148 SLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTL--LTFY--TYTLMTASIFLTM---- 219
Cdd:TIGR01770 266 EAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYifIYALMSLGAFGVLsllr 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 220 --NTTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLA 297
Cdd:TIGR01770 346 syKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-296 |
1.62e-21 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 95.08 E-value: 1.62e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 8 ILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDI 86
Cdd:MTH00199 101 ILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSI 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 87 TQLTYPPAC----LLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTtmSIMSI 162
Cdd:MTH00199 181 QGINSILTGdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 163 TLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNP----KLTLLTFYTYTLMTA---SIFLTMNTTN--ISKLSTLMTs 233
Cdd:MTH00199 259 IYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSIcsfSIILSLKLTKglIVEVSGLSR- 337
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 37780961 234 wtKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:MTH00199 338 --KNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-296 |
1.64e-19 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 88.67 E-value: 1.64e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 14 LLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDITQL---- 89
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 90 -TYPP-----ACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIM-KLPP----TTLLLITSHSLNP---TLLT 155
Cdd:COG0651 197 aELDPglllaAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVyailRVLTLLFGADPALflgTLLL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 156 TMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLL--TFYT--YTLMTASIFLT-------MNTTNI 224
Cdd:COG0651 277 VLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAgaLFHLlnHALAKALLFLAagaieraTGTRDL 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 37780961 225 SKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:COG0651 357 DKLGGL---GKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-296 |
2.10e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 86.07 E-value: 2.10e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 3 PTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAI---------EAATKYFLVQAAASTLMLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 74 STINAWHTGQ--------------WDITQLTYPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLppT 139
Cdd:MTH00198 267 CALYFGFTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 140 TLLLITSHSLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYT---LMTASIF 216
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAvtyLVSALAS 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 217 LTM----------------------NTTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQE 274
Cdd:MTH00198 425 FTVictleefgtrtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIA 504
|
330 340
....*....|....*....|....*....
gi 37780961 275 MTTTTMIISMASLLGL-------FFYLRL 296
Cdd:MTH00198 505 FSSSLSIYYLVALFAIictcisaFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
1.18e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 71.45 E-value: 1.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDITQLT--YPPACLLLT------TAIAT 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgaLAENPTVVTafgfvlLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 105 KLGLAPLHFWFPEVLQG-SSLTTALLLSTIMKLPPTTLLLITSHSLNP---------TLLTTMSIMSITLGGWMGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTVFGGdfrfalglgWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 175 TRKIMAFSSISHLGWMMIIITYNPKLTLL--TFYT--YTLMTASIFL-------TMNTTNISKLSTLMTswtKTPMLNTT 243
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLaagaievTYGTRRLSELSGLGR---RMPLTAAA 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 37780961 244 LMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAY 298
Cdd:PRK08375 372 FAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
1-263 |
9.82e-13 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 68.88 E-value: 9.82e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 1 MTPTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHP-RAIEAATKYFLVQAAASTLML--FSST-- 75
Cdd:CHL00049 108 MAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVygFSWLyg 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 76 INAWHTGQWDI------TQLTYPPACLL----LTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMK---LPPTTLL 142
Cdd:CHL00049 188 LSGGEIELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKvaaSALATRI 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 143 LITSHSLNPT----LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMI-IITYNPKLTLLTFYTYTLmtasIFL 217
Cdd:CHL00049 268 FDIPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIgIIVGDSNDGYASMITYML----FYI 343
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 37780961 218 TMN---------------TTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:CHL00049 344 FMNlgtfacivlfglrtgTDNIRDYAGL---YTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
3-298 |
1.63e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 68.48 E-value: 1.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 3 PTAKLILTLSILLGTTITITSNHWTTAWAGLEINTLS---IIPMISKshhpRAIEAATKYFLVQAAASTLMLFSSTINAW 79
Cdd:PRK08668 97 DAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 80 HTGQWDITQ----LTYPP-------ACLLLTTAIATKLGLAPLHFWFPE-----------VLQG--SSLTTALLLSTIMK 135
Cdd:PRK08668 173 KTGTFDFADisqgLINDTstgfaliVFLFLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGqlSKLGAYGFLLVLYV 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 136 LPPTTLLL----ITSHSLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLT----LLTFYT 207
Cdd:PRK08668 253 LPGTKLFSefgtYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfaggLFHVFN 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 208 YTLMTASIFLTM-------NTTNISKLSTLMTswtKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTM 280
Cdd:PRK08668 333 HALFKGLFFLIFaaviyrtGTTKISEMGGLIE---KMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAF 409
|
330
....*....|....*...
gi 37780961 281 IISMASLLGLFFYLRLAY 298
Cdd:PRK08668 410 MAFFGSIGSFLYVFRPLA 427
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-291 |
7.24e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 66.26 E-value: 7.24e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 38 LSIIPM---ISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQW-----DITQLTYPPA-----CLLLTTAIAT 104
Cdd:COG1008 142 LMLIPMyflIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 105 KLGLAPLHFWFPEVLQGSSLTTALLLSTIMK-----------LPpttLLLITSHSLNPTLLTtMSIMSITLGGWMGLNQT 173
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLkmggygllrfaLP---LFPEASAYFAPLLAA-LGVIGIIYGALVALAQT 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 174 QTRKIMAFSSISHLGWMMI-IITYNPK-LTLLTFY--TYTLMTASIFLT-------MNTTNISKLSTLmtsWTKTPMLNT 242
Cdd:COG1008 298 DLKRLIAYSSVSHMGFVLLgIFALNPLgLQGAVLQmvSHGLITAALFLLvgvlydrTHTRDIADLGGL---AKRMPVLAA 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 37780961 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMT-----TTTMIISMASLLGLF 291
Cdd:COG1008 375 LFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWlailaALGLILTAAYLLWMY 428
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-271 |
2.46e-11 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 64.79 E-value: 2.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 48 HHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDITQL-----------TYPPACLLLTTAIATKLGLAPLHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaptilsspLLTLILLLLLLGAFGKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 117 EVLQGSSLTTALLLSTIMKlpptTL---LLITSH---SLNPTLLTTMSIM-SITL--GGWMGLNQTQTRKIMAFSSISHL 187
Cdd:COG1009 236 DAMEGPTPVSALLHAATMV----KAgvyLLARLSplfALSPVWLTVVAIIgAITAlfAALIALAQTDIKRVLAYSTVSQL 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 188 GWMMIII---TYNPKLTLLTfyTYTLMTASIFL-------TMNTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPL 257
Cdd:COG1009 312 GYMFLALgvgAYVAALFHLL--THAFFKALLFLgagsvihATGTRDIRKMGGL---RKKMPITAITFLIGALSLAGIPPF 386
|
250
....*....|....
gi 37780961 258 TGFLPKWLIIQELI 271
Cdd:COG1009 387 AGFFSKEAILEAAL 400
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.38e-10 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 62.38 E-value: 1.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 50 PRAIEAATKYFLVQAAASTLMLF-SSTINAWHTGQwdiTQLTY----------PPACLLLTTAIAT---KLGLAPLHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLSAialalitspsLGLALALVFVIAGiafKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 116 PEVLQGSSLTTALLLSTIMKLPPTTL---LLITSHSLNPT----LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 189 WMMI--IITYNPKLTLLTFY--TYTLMTASIF-------LTMNTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPL 257
Cdd:PRK02504 314 FVMIglVAGTEAGYASMVFYllAYLFMNLGAFacvilfsLRTGTDQISDYAGL---YQKDPLLTLGLSLCLLSLGGIPPL 390
|
....*.
gi 37780961 258 TGFLPK 263
Cdd:PRK02504 391 AGFFGK 396
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.49e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.04 E-value: 1.49e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 33 LEINTLSIIPMIS-KSHHPRAIEAATKYFLVQAAASTLMLFSSTInawHTGQWDITQLTYPP-------------ACLLL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGIAL---LYGQYGTLNMAYLAvkmsenptvvakiALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 99 TTAIATKLGLAPLHFWFPEVLQG--SSLTTALLLSTIMKLPPTTLLLITSHSLNPTLLTTMSIMSI------TLGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALARVLFSIYGPAINLATVGWVIIIlgcltmFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 171 NQTQTRKIMAFSSISHLGWMMI-----IITYNPklTLLTFYTYTLMTASIFLTMN--------------------TTNIS 225
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLLglgvgLAALGD--PAMASYGEIALAGGIYHIVNhalykallfltagaviyetgTRNLN 384
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 37780961 226 KLSTLMTswtKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 385 ELGGLAR---TMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-298 |
1.67e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 61.91 E-value: 1.67e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 48 HHPRAIEAATKYFLVQAAASTLMLFS--------STIN------AWHTGQWDITQLTY--PPACLLLTTAIAT-----KL 106
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLAlaflyatfGTLNmadlsaKIRGLSFPLTGGLAgnPPLALGVALALALwaftiKA 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 107 GLAPLHFWFPEVL-QGSSLTTALLLSTIMKLPPTTLLLI------TSHSLNPTLLTTMSIM------SITLGGWMGLNQT 173
Cdd:PRK12667 238 AIFPNHFWLPDAHpAAPSPVSAMLSGLVVNVGAYAIIRFlytifgISPSLIDFRAALSPILiilgavSAIIGALMMVVQK 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 174 QTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTL----------MTASIFL-TMNTTNISKLSTLMtswTKTPMLNT 242
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiaksllfLASGVFIhAAGTRDIDELAGLG---RKMPIASF 394
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 37780961 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAY 298
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWY 450
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-288 |
2.28e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 58.41 E-value: 2.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 50 PRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQW----DITQLTYPPAC-----LLLTTAIATKLGLAPLHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 120 QGSSLTTALLLSTIMKLPPTTLLLI-------TSHSLNPtLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFnlplfpdASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 193 -IITYNPKLT---LLTFYTYTLMTASIFLT-------MNTTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFL 261
Cdd:TIGR01972 311 gIFSFNELGIsgaVFQMISHGLITAALFLLvgvlyerAHTRDIAKYGGL---ANKMPVLAAFFMLFAMASLGLPGTSGFV 387
|
250 260
....*....|....*....|....*..
gi 37780961 262 PKWLIIQELIKqeMTTTTMIISMASLL 288
Cdd:TIGR01972 388 GEFLILLGSFK--VNPVVAFLAALGIV 412
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
55-263 |
8.50e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 56.86 E-value: 8.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 55 AATKYFLVQAAASTLMLFSSTINAWHTGQWDITQL-TYPPACLLLTTAIA-------TKLGLAPLHFWFPEVLQGSSLTT 126
Cdd:PRK12644 158 AALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELlADPPTGPAVSVAVVlilvgalSKSAIVPFHFWLPGAMAAPTPVS 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 127 ALLLSTIM---------KLPPTtllLITSHSLNPTLLTtMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYN 197
Cdd:PRK12644 238 AYLHAAAMvkagiylvaRLAPG---FADVPVWRPTVLV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIG 313
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 37780961 198 PK------LTLLTfyTYTLMTASIFLTMN-------TTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 314 TRdaalagLAMLL--AHALFKAALFLVVGiidhstgTRDIRKLSGL---GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-210 |
2.15e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 52.45 E-value: 2.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 13 ILLGTTITITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAA------STLMLFSSTINAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 87 TQLT-----YPPACLLLT-----TAIATKLGLAPLHFWFPEV-LQGSSLTTALLLSTIMKLPPTTLLLITS-------HS 148
Cdd:PRK08676 191 TELAahaslLSPSVLGASflfifIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 37780961 149 LNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYTL 210
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
38-194 |
3.59e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 51.74 E-value: 3.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 38 LSIIPM---ISKSHHPRAIEAATKYFLVQAAASTLMLFS----STINAWHTGQWDITQLTYPPACLLLTT--------AI 102
Cdd:PRK05846 142 AMLIPMyflIGVWGGKNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLLNLPLPPGVQYwlflaffiAF 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 103 ATKLGLAPLHFWFPEVLQ-----GSSLTTALLLST-------IMkLPpttLLLITSHSLNPtLLTTMSIMSITLGGWMGL 170
Cdd:PRK05846 222 AVKMPMFPLHTWLPDAHVqaptaGSVLLAGILLKMgaygllrFS-LP---LFPDASHEFAP-IIITLGVIAIIYGALVAL 296
|
170 180
....*....|....*....|....
gi 37780961 171 NQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK05846 297 AQTDIKKLIAYSSISHMGFVTLGI 320
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
5.59e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 51.37 E-value: 5.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 48 HHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDITQLTYPPACL--------------LLTTAIATKLGLAPLHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplflitliLIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 114 WFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPT-----LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 189 WMMIIITYN----PKLTL--LTFY--TYTLMTASIFLTMN-------TTNISKLSTLMtswTKTPMLNTTLMLTLLSLAG 253
Cdd:PRK12649 316 YLMTMYGYTtyhePGLGVaaATFHllNHATFKACLFLVAGivaheaaTRDIRKLGGLR---KEMPITFIVASIAALAMAG 392
|
250
....*....|
gi 37780961 254 LPPLTGFLPK 263
Cdd:PRK12649 393 IPPLNGFLSK 402
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-190 |
6.03e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 51.08 E-value: 6.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 20 TITSNHWTTAWAGLEINTLSIIPMISKSHHPRAIEAATKYF---------------LVQAAASTLM------LFSSTINA 78
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIiicsvgvafalfgtiLVYANAATVMgdgemaILWTELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 79 wHTGQWDITQLTYPPACLLLttAIATKLGLAPLHFWFPE-----------VLQGSSLTTAL---------LLSTIMKLPP 138
Cdd:PRK06458 204 -HASLLDPTLMKLAFVFLLI--GFGTKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALyavlryyilIDAAIGSDFP 280
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 37780961 139 TTLLLItshslnptllttMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWM 190
Cdd:PRK06458 281 GRLLLI------------FGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLI 320
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
72-311 |
3.29e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 48.92 E-value: 3.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 72 FSSTINAWHTGqwDITQLTYPpaCLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMkLPPTTLLLITSHSL-- 149
Cdd:MTH00020 194 FSSVFNMVVSA--PSSDITLI--CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATM-VTAGVFLLIRSSPLfe 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 150 -NPTLLTTMSI---MSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIII-TYNPKLTLLTFYTYTLMTASIFLTMNTT-- 222
Cdd:MTH00020 269 qAPLALIIVTIvgsLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSVih 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 223 ------NISKLSTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQE-MTTTTMIISMASLLGLFFYLR 295
Cdd:MTH00020 349 alsdeqDMRKMGGLISF---LPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYyLIFAYWLGCFSALLTAFYSIR 425
|
250
....*....|....*.
gi 37780961 296 LAYCSTITlppNPSSK 311
Cdd:MTH00020 426 LIYLTFLS---NTNLK 438
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
3.51e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 48.49 E-value: 3.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 55 AATKYFLVQAAASTLMLFSSTINAWHTGQ--WDITQLT---YPPACLLLT-----TAIATKLGLAPLHFWFPEVL-QGSS 123
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGaksYPLALELLLyagflIAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 37780961 124 LTTALLLSTIMKLPPTTL------LLITSHSLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGI 294
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
91-266 |
3.72e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 48.76 E-value: 3.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 91 YPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPT-----LLTTMSIMSITLG 165
Cdd:PRK12647 194 YLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTG 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 166 GWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTY----TLMTASIFLT-------MNTTNISKLSTLmtsW 234
Cdd:PRK12647 274 ALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVagiidheTGTRDITKLGGL---R 350
|
170 180 190
....*....|....*....|....*....|..
gi 37780961 235 TKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12647 351 RAMPITAAAALLAALSMAGLPPLFGFLAKELI 382
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
97-263 |
7.82e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 47.73 E-value: 7.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 97 LLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITS--HSLNPT---LLTTMSIMSITLGGWMGLN 171
Cdd:PRK12650 213 LIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSpvFHDVAVwnwLLIIVGMITALMGAVFAVQ 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 172 QTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYT----LMTASIFLTM-------NTTNISKLSTLmtsWTKTPML 240
Cdd:PRK12650 293 KTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFMLIgvvdhqaGTRDIRRLGSL---WRRMPFT 369
|
170 180
....*....|....*....|...
gi 37780961 241 NTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 370 FVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-308 |
1.17e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 46.95 E-value: 1.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 34 EINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDITQLTY--------PP---ACLLLTTAI 102
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNallvnptsPViygGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 103 ATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLIT-----SHSLNP---TLLTTMSIMSITLGGWMGLNQTQ 174
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPsaqGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 175 TRKIMAFSSISHLGWMMIIITYNPKLT----LLTFYTYTLMTASIFL-------TMNTTNISKLSTLMTSwtkTPMLNTT 243
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGivagIFHAINHVIYKSALFLgagivsyRTKTSNLRKLGGLLPV---MPVVAFM 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 37780961 244 LMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRLAYcsTITLPPNP 308
Cdd:PRK06277 367 VLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKP 429
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-296 |
3.17e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 45.50 E-value: 3.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 152 TLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTY----TLMTASIFLTM-------N 220
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSgsisyhfG 359
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 37780961 221 TTNISKLSTLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:PRK12662 360 TTKLEDCLNL---WKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-296 |
3.77e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 45.32 E-value: 3.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 103 ATKLGLAPLHFWFPEVLQG-----SSLTTALL----LSTIMKLppTTLLLITSHSLNPTLLTTMSIMSITLGGWMGLNQT 173
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAppiaiAALFGALLtkvgVYAIART--FTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYF 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 174 QTRKIMAFSSISHLGWMMIIITYNPKLTLLTFYTYT----LMTASIFLTM-------NTTNISKLSTLMTSWtktPMLNT 242
Cdd:PRK07691 298 DIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLihdmIVKAALFLLIgimikitGTTDLKKMGGLIKRY---PVLGW 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 37780961 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASLLGLFFYLRL 296
Cdd:PRK07691 375 MFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-291 |
4.62e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 45.11 E-value: 4.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 59 YFLVQAAASTLMLFSSTINAW-HTGQWDITQLTYPPAC-----LLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLST 132
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 133 IM-KLPPTTLLLITSHSLNP-----TLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLG--------WMMIIITYNP 198
Cdd:PRK08667 246 VMlKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 199 KLTLLT-------------FYTYTLMTA-SIFLTMNTTNISKLSTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK08667 326 TLALLAlggalfhslnhalFKSLLFLTAgSVVHATGTRNIEKMGGLVKL---MPYTSALFLVGAVSIAALPPFNGFASEL 402
|
250 260
....*....|....*....|....*...
gi 37780961 265 LIIQELIKQEMTTTTMI-ISMASLLGLF 291
Cdd:PRK08667 403 LLYESFFQSFSVADPLIkILLFSVLAIF 430
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
4.93e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 44.95 E-value: 4.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 111 LHFWFPEVLQGSSLTTALLLSTIMkLPPTTLLLITSHSLNPTLLTTMSIMSIT------LGGWMGLNQTQTRKIMAFSSI 184
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATM-VTAGVFLMIRSFPLFEKAPLTLLIITIFgaltafFAATVGLVQNDLKKVIAYSTC 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 185 SHLGWMMIIITY--NPKLTLLTFYTYTLMTASIFL---------TMNTTNISKLSTLMTSwtkTPMLNTTLMLTLLSLAG 253
Cdd:MTH00032 323 SQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLsagsvihstTVDEQDMRKMGGLIHS---IPFTYTMMLIGSFSIMG 399
|
170
....*....|....*
gi 37780961 254 LPPLTGFLPKWLIIQ 268
Cdd:MTH00032 400 LPYLTGFYSKDLILE 414
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
9.03e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 44.17 E-value: 9.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 33 LEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDITQL-TYPPACL-LLTTAIATKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLaTADPEAFaLIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 111 LHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPT--LLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 189 WMMIIITYNPKLTLltfyTYTLMTASIFL---TMNTTNISKL-STLMTSWTKTPmlnttLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK07234 283 FILAAPLVGGLYAL----AHGLVKSTLFLcagALPSRNFTELiSQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKV 353
|
....*..
gi 37780961 265 LIIQELI 271
Cdd:PRK07234 354 LTLKNLL 360
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
91-272 |
1.78e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 43.21 E-value: 1.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 91 YPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLITSHSLNPT-----LLTTMSIMSITLG 165
Cdd:PRK12646 209 FIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFG 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 166 GWMGLNQTQTRKIMAFSSISHLGWMMIII------TYNPKLTLLTFYTYTLMtASIFLTMN------------------- 220
Cdd:PRK12646 289 SITALKQWDLKGILAYSTISQLGMIMAMVgigggyAQHQQDAIASIYVFVLF-AALFHLMNhaifkcalfmgvgiidhea 367
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 37780961 221 -TTNISKLSTLMTSWtktPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIK 272
Cdd:PRK12646 368 gTRDIRILSGMRQLF---PKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-268 |
3.50e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 42.39 E-value: 3.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 96 LLLTTAI----ATKLGLAPLHFWFPEVLQGSSLTTALLLSTIM-KLPPTTLLLI-------TSHSLNPTLLTTMSImSIT 163
Cdd:PRK07363 205 LILLTGLllgfGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLaKLGTYGLLRFglqlfpqTWSLVAPGLAIIGTI-SVI 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 164 LGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYNPKLTLL----TFYTYTLMTASIF-------LTMNTTNISKLSTLMT 232
Cdd:PRK07363 284 YGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLgavaQMISHGLILALLFhlvgiveRKVGTRDLDVLNGLMN 363
|
170 180 190
....*....|....*....|....*....|....*.
gi 37780961 233 SWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07363 364 PIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
9.27e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 40.84 E-value: 9.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 55 AATKYFLVQAAASTLMLFSSTINAWHTG--QWDITQL---TYPPAC-LLLTTAI----ATKLGLAPLHFWFPEV-LQGSS 123
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTqLLLLAPIlvgfGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 124 LTTALLLSTIMKLPPTTLL------LITSHSLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYN 197
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 198 PKLTLLT----FYTYTLMTASIFLTM-------NTTNISKLSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 318 TPLSILAavfqMISHGLISALLFLLVgvvykktGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
157-300 |
9.53e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 40.78 E-value: 9.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 157 MSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYN-PKLTLLTFYTYTLMTASIFLT--------MNTTNISKL 227
Cdd:MTH00209 245 LGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFICagniihshGHSQDIRMV 324
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 37780961 228 STLmtsWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMASL-LGLFFYLRLAYCS 300
Cdd:MTH00209 325 GNL---WYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSYFS 395
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-285 |
1.74e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 40.18 E-value: 1.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 9 LTLSILLGTTITITSNHWTTaWAGLEINTLSIIPMISKSHHPRAIEAATKYFLVQAAASTLMLFSSTI---NAWHTGQW- 84
Cdd:PRK06589 122 FNLTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIliyTKTGNLDFv 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 85 DITQLTYPPACLLLTTAIA--TKLGLAPLHFWFPEVLQGSSLTTALLLSTIM----KLPPTTLLLITSHSLNPTLLTTMS 158
Cdd:PRK06589 201 SGGLFSKNQSIILLLMFIYgiAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQRIFAEF 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 159 -------IMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMII--ITYNPKLTLLTFY--TYTLMTASIFLTMNTTNISK- 226
Cdd:PRK06589 281 nwlifipIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSafILTPKALGAAILHlvSHSFAKICLFYSMGSIYSLKk 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 37780961 227 ---LSTLMTSWTKTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIISMA 285
Cdd:PRK06589 361 edqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLV 422
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
1.89e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.20 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 107 GLAPLHFWFPEVLQGSSLTTALLLSTI-MKLPPTTLLLITSHSLNPTL-----LTTMSIMSITLGGWMGLNQTQTRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 181 FSSISHLGWMMI--------IITYNPKLTLLTF-------YTYTLMTASIFLTMNT----TNISKLSTLMTSWTKTPMLN 241
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLvgglyhlLNHSLFKSVLFLGAGSvwfrTGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 37780961 242 TTLMLTLLSLAGLPPLTGFLPKWLIIQELIK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
69-300 |
2.08e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 39.93 E-value: 2.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 69 LMLFSSTINAWHTGQWDITQLTYPPACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLLLitshS 148
Cdd:MTH00211 181 MVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLI----R 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 149 LNPTLLTTMSIMSITL---------GGWMGLNQTQTRKIMAFSSISHLGWMMIIITYN-PKLTLLTFYTYTLMTASIFL- 217
Cdd:MTH00211 257 LSPLFQNNQLILGAVLllgaltmlfGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNqPQLAFLHICTHAFFKAMLFMc 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 218 -------TMNTTNISKLSTLMTSwtkTPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELIKQEMTTTTMIIS-MASLLG 289
Cdd:MTH00211 337 sgsiihgLNNEQDIRKMGGLSKN---LPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTlLATSLT 413
|
250
....*....|.
gi 37780961 290 LFFYLRLAYCS 300
Cdd:MTH00211 414 AAYSFRLIFLS 424
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
14-192 |
5.02e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 38.53 E-value: 5.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 14 LLGTTITITSNHWTT---AWAGLEI---NTLSIIPmisksHHPRAIEAATKYFLVQAAASTLMLFSSTINAWHTGQWDIT 87
Cdd:PRK08168 110 LAAVHLLVLSDHLLVliaAWAAISLalhRLLCFYP-----DRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLS 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 88 QL-----TYPP------ACLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPPTTL-----LLITSHSLNp 151
Cdd:PRK08168 185 ALwahlaAQGAspslqaAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGGFVLirfapLLEQAPPAR- 263
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 37780961 152 TLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMI 192
Cdd:PRK08168 264 WLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
80-217 |
6.30e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 38.35 E-value: 6.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 80 HTGQWDITQ--LTYPPACLLL---TTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMKLPpTTLLLITSHSL---NP 151
Cdd:MTH00066 190 NTNSWELQQifLLNDNSTLPLlglILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVA-GIFLLIRFHPLlenNQ 268
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 152 TLLTT-MSIMSIT--LGGWMGLNQTQTRKIMAFSSISHLGWMMIIITYN-PKLTLLTFYTYTLMTASIFL 217
Cdd:MTH00066 269 TALTIcLCLGALTtlFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNqPQLAFFHICTHAFFKAMLFL 338
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
95-311 |
6.41e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 38.45 E-value: 6.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 95 CLLLTTAIATKLGLAPLHFWFPEVLQGSSLTTALLLSTIMkLPPTTLLLITSHSL---NPTLLTTMSIM-SIT--LGGWM 168
Cdd:MTH00210 214 CLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATM-VTAGVFLIIRSGPLfegSPLALTIVTILgALTafFAATV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 169 GLNQTQTRKIMAFSSISHLGWM-MIIITYNPKLTLLTFYTYTLMTASIFLTMNTT--------NISKLSTLMTSwtkTPM 239
Cdd:MTH00210 293 GVVQNDLKKVIAYSTCSQLGYMvMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVihavsdeqDMRKMGGLIKS---IPF 369
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 37780961 240 LNTTLMLTLLSLAGLPPLTGFLPKWLIIqELI--KQEMTTTTMIISMASLLGLFFYLRLAYCSTITlppNPSSK 311
Cdd:MTH00210 370 TYVMILIGSLSLMGFPYLTGFYSKDLIL-ELTydKYYIAFAYWLGSFSALLTAFYSIRLIYLTFIT---NTNSK 439
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
8.71e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 37.76 E-value: 8.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 55 AATKYFLVQAAASTLMLFSSTINAWHTG--QWDITQL---TYPPACLLLT-----TAIATKLGLAPLHFWFPEVLQGSSL 124
Cdd:PRK02546 166 AATKFILYTAGSSLFILLAALAMAFYGDtpTFDMTALaakDFGLGFQLLCyagllIAYGVKLPIVPLHTWLPDAHGEATA 245
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 37780961 125 TTALLLSTIM-KLPPTTLL------LITSHSLNPTLLTTMSIMSITLGGWMGLNQTQTRKIMAFSSISHLGWMMIII 194
Cdd:PRK02546 246 PVHMLLAGILlKMGGYALLrmnagmLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGI 322
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
110-192 |
8.72e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 38.08 E-value: 8.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37780961 110 PLHFWFPEVLQGSSLTTALLLSTIMKLPPTTLL--LITSHSLNPTLLTTMSIM-SIT--LGGWMGLNQTQTRKIMAFSSI 184
Cdd:PRK07376 245 PLHVWLPDAMEGPTPISALIHAATMVAAGVFLVarMYPVFEQFPAVMTVIAWTgAITafLGASIALTQNDIKKGLAYSTI 324
|
....*...
gi 37780961 185 SHLGWMMI 192
Cdd:PRK07376 325 SQLGYMVM 332
|
|
| |
