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Conserved domains on  [gi|37780807|gb|AAP32416|]
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ATP synthase 8 (mitochondrion) [Amazona amazonica]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP8 super family cl03008
ATP synthase F0 subunit 8; Provisional
 1-54 3.64e-09

ATP synthase F0 subunit 8; Provisional


The actual alignment was detected with superfamily member MTH00133:

Pssm-ID: 470718  Cd Length: 55  Bit Score: 46.41  E-value: 3.64e-09
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 37780807   1 MPQLNPNPWFSIMIMSWLTFSLILQPKMLSFTPTNTPTNKTPTTMKNKPWTWPW 54
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPW 54
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-54 3.64e-09

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 46.41  E-value: 3.64e-09
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 37780807   1 MPQLNPNPWFSIMIMSWLTFSLILQPKMLSFTPTNTPTNKTPTTMKNKPWTWPW 54
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPW 54
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-54 3.18e-06

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 39.25  E-value: 3.18e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 37780807    1 MPQLNPNPWFSIMIMSWLTFSLILQPKMLSFTPTNTPTNKTPTTMKNKPWTWPW 54
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNPWEWKW 54
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-54 3.64e-09

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 46.41  E-value: 3.64e-09
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 37780807   1 MPQLNPNPWFSIMIMSWLTFSLILQPKMLSFTPTNTPTNKTPTTMKNKPWTWPW 54
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPW 54
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-54 3.99e-09

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 46.42  E-value: 3.99e-09
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 37780807   1 MPQLNPNPWFSIMIMSWLTFSLILQPKMLSFTPTNTPTNKTPTTMKNkPWTWPW 54
Cdd:MTH00123  1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPTKTNTTTNTT-PWTWPW 53
ATP8 MTH00171
ATP synthase F0 subunit 8; Provisional
 1-54 1.38e-06

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177225  Cd Length: 54  Bit Score: 40.04  E-value: 1.38e-06
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 37780807   1 MPQLNPNPWFSIMIMSWLTFSLILQPKMLSFTPTNTPTNKTPTTMKNKPWTWPW 54
Cdd:MTH00171  1 MPQLNPIPWFFIFLFSWLIFLTLLPNKITKHIFTNKPSPNQTEKPKPNEWNWPW 54
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-54 3.18e-06

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 39.25  E-value: 3.18e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 37780807    1 MPQLNPNPWFSIMIMSWLTFSLILQPKMLSFTPTNTPTNKTPTTMKNKPWTWPW 54
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNPWEWKW 54
ATP8 MTH00072
ATP synthase F0 subunit 8; Provisional
 1-55 7.85e-06

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 164642  Cd Length: 54  Bit Score: 38.03  E-value: 7.85e-06
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 37780807   1 MPQLNPNPWFSIMIMSWLTFSLILQPKMLSFtPTNTPTNKTPTTMKNKPWTWPWS 55
Cdd:MTH00072  1 MPQLNPGPWFAIFLMSWLIFLLILPFKISNH-KNLNEPTSQNKKNKPESWNWPWT 54
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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